Rorug06G0324400

Tyrosine kinase, catalytic domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000006
OG0000184
Physical Location & Seq
Reverse (-)
47549330 .. 47555116
5787 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug06G0324400.1

Sequence Viewer

Length: 1953 bp
ATGCCTCCGGAGAAACGCAAGCCTGAGGAGGAACCGGAACCGGCTAAGAGCCCCGCGGTGTCCACTCATCATGAGGTGACTCAACCTGCTTCCGCTCCGCCTCCGTCGACGACTCAGGCAACTTCGAGCGAAGTAGCTACCGGTTCGCCGGCGAAGTCGGGCCCCTACAAGCGGCGTGAGATTCCGGCGAGGAAGAGAACCAAACGAGGTGATGGAAAGAAGACGGAATTTGAACAAGGCGAAGAGCTCGAGTCCGGAGATGGTGAGGAAGCCAAGACGTCCAACGTCCAAGGCACCAAAGCGGGAGCTGAAAATAAGAATTCCGGTGGTGACGAGGCTAAGAGATCGAGGAAGAGTACTCAGCACCGTTCGTTGGTGACAAGGGAGAATCAGGTAAAAGCTGGCACTGAAGAGGATAGACACCCTGTTAAGCAGGAGGCACTTAAGGATTCTCCTAATCATGATTCTCAATCACCTGAAGTCACATCAAAAGCTGTATCCGGTGGTGATGATGTTAATGATAGTCTGAAGAGTCTGACAAAGAGATTATCAGCTGCTCTTGTGAATGTTAGTGGCAAAGAAGACTTCGTGAATCAGCATTCCAAAGTTGCTGAAGAAGCTGTTGCAGGATGGGAAAAGGCTGAAAATGAGGTGGCTAGCTTAAAGCTACAACTTGAAGTTGCAGTTAAGCAAAACTCAGCTCTGGAAGATCGTGTAAGTCATCTTGATGGAGCCCTCAAGGAATGTGTTAGGCAGCTTAGACAATTGAAGGGTGATATTGCAGATGCGAAGGATGGTTTGTCGCAAAAGGAAAATGAGCTTTTGGAAGCCGGGCAGATCATAAATGAACTACAGAATGAGAAACCAGAGCTGTATATACTGGTGGAGGATTTGACTGGTAAAAGTGATGATGCGAAGGTGGTGCTGGAAGATCAAGAGAAGCAAATTTTCAAACTACATGAAGACAATGACCATCATAGTAAAGAGATTGGCTGCCTCTGTGAAGTGAATCAGAAGATGGAGGCGGAACTGTCAAAATTGCATGAAGAAGCCGAAAAGTCCAAACTTGAGGAGGAAAGGTTTATCAGTGAACTAAAAAGGGGAAGAGAAGAGATTGAAATGTGGGTGACTCAGGCTGCCACCCTCTTTGGAGAACTGCAGATCTCCTCCATTCGTGAAACATTGTTTGAAGGAAAGCTTCGTGAGCTCATTGAAACCTGTCACATCCATGAAGACAAAAGCATTTCGAAAAGTCTGGACATTGAAATGATGAAAGAAGGAGTCAGTACAATGGAACGTGAAAATGGAGAGCTACAAGCTCAGTTGGCTGCCTATATTCCAGCTGTCATCCCTCTGGAGGAGTGTACAACATCCCTTGAGAATCATTCACTTATTAAAACCAGATCACTCGACACGAAAGACTCAGAGGATGTCGAGGCTGGTGAAGAGGATGTAGAGGATGATGAAGAGGATGAGGAGGATGTAGAGGAGGATGTAGAGGATGAAGAGGATGTAAAAGATGAATACCGCGCTGTGTTTTGCGTTGTCGAGCATGATGAAGAGGATGAAGAGGATGAAGAGGATGATGAAGAGGATGAGGAGGATGCAGAGGATGAAGGCCGCTTGTTTATGGTTTATTATGGAGGGGCAAGAGGGCCTGTTATACAATTTGAGAGACATCATATTGCCGGAGCAATCAATTTGGATGATTATAGCGAAATAAACGAGGTCGATCAGGCAGTTTGGCAGATCATCTTCACCTTTTTCGGTTCCTATGAAGGATTGTTCTTCTGGTATATACGTCTCACTGAGTATGACAATTTGGAGTACCTCTCTCGAGATGCTTGGCTTTGGCCGTGGGATCGTTTCTACAGAGAAGCAGATGGGGTCGTGGTGACTCGCCAAGATCCTGAGCCTCACTTACACCCTGCATTAGGTGATATCGTCGCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
MS_channel Pkinase_Tyr

Protein Analysis

650

Amino Acids

73.33

Weight (kDa)

4.53

Isoelectric Point (pI)

56.78

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FPP PF05911 193 - 259 1.3e-26 Filament-like plant protein, long coiled-coil
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000184)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G23530
fragaria_vesca FvH4_2g00440 FvH4_2g09720 FvH4_3g28580 FvH4_3g28600
malus_domestica MD00G1203100.v1.1 MD03G1173000.v1.1 MD03G1173100.v1.1 MD05G1060700.v1.1 MD10G1068500.v1.1 MD11G1191000.v1.1
prunus_persica Prupe.4G252600_v2.0.a1 Prupe.8G004100_v2.0.a1 Prupe.8G090400_v2.0.a1
pyrus_communis pycom03g13020 pycom05g05160 pycom10g05450
rosa_chinensis RchiOBHm_Chr2g0154081 RchiOBHm_Chr3g0458401 RchiOBHm_Chr4g0422631 RchiOBHm_Chr5g0013851 RchiOBHm_Chr5g0052531 RchiOBHm_Chr5g0052561 RchiOBHm_Chr5g0062251 RchiOBHm_Chr6g0249211 RchiOBHm_Chr6g0249811 RchiOBHm_Chr6g0250041 RchiOBHm_Chr6g0250061 RchiOBHm_Chr6g0250071 RchiOBHm_Chr6g0250101 RchiOBHm_Chr6g0250261 RchiOBHm_Chr6g0250271 RchiOBHm_Chr6g0250281 RchiOBHm_Chr6g0250341 RchiOBHm_Chr6g0250361 RchiOBHm_Chr6g0266021 RchiOBHm_Chr7g0181171 RchiOBHm_Chr7g0181191
rosa_laevigata RLG00000002200 RLG00000007738 RLG00000014126 RLG00000014137 RLG00000015547 RLG00000015553 RLG00000019990 RLG00000022548 RLG00000025161 RLG00000034812 RLG00000034813 RLG00000035546
rosa_multiflora Rmu_co8002032.1_g000001 Rmu_co8108364.1_g000001 Rmu_co8201470.1_g000001 Rmu_co8274775.1_g000001 Rmu_sc0000441.1_g000004 Rmu_sc0000704.1_g000006 Rmu_sc0000704.1_g000038 Rmu_sc0000704.1_g000044 Rmu_sc0000776.1_g000016 Rmu_sc0000830.1_g000025 Rmu_sc0001147.1_g000015 Rmu_sc0001147.1_g000016 Rmu_sc0001209.1_g000044 Rmu_sc0002200.1_g000049 Rmu_sc0002311.1_g000008 Rmu_sc0003627.1_g000015 Rmu_sc0004691.1_g000004 Rmu_sc0005070.1_g000006 Rmu_sc0005798.1_g000012 Rmu_sc0006032.1_g000002 Rmu_sc0006032.1_g000009 Rmu_sc0006110.1_g000003 Rmu_sc0006803.1_g000002 Rmu_sc0007793.1_g000026 Rmu_sc0008209.1_g000004 Rmu_sc0008209.1_g000007 Rmu_sc0009002.1_g000003 Rmu_sc0009002.1_g000008 Rmu_sc0013424.1_g000007 Rmu_sc0013809.1_g000001 Rmu_sc0015580.1_g000005 Rmu_sc0015938.1_g000005 Rmu_sc0022309.1_g000001 Rmu_ssc0000066.1_g000013 Rmu_ssc0000409.1_g000028
rosa_roxburghii Rroxscaffold_174G00435120 Rroxscaffold_1G00028400 Rroxscaffold_1G00028440 Rroxscaffold_1G00028450 Rroxscaffold_6G00421100 Rroxscaffold_7G00202080 Rroxscaffold_7G00216660 Rroxscaffold_7G00217380
rosa_rugosa Rorug03G0027600 Rorug05G0270900 Rorug05G0271000 Rorug05G0347300 Rorug05G0494400 Rorug05G0494500 Rorug05G0495500 Rorug06G0022600 Rorug06G0324400 Rorug06G0439500
rosa_samantha Rh1CG424500 Rh2AG352300 Rh2BG391600 Rh3AG087400 Rh3CG090500 Rh3DG091100 Rh3DG119700 Rh4CG247600 Rh4DG207900 Rh5AG408000 Rh5BG354600 Rh5BG354800 Rh5BG421800 Rh5BG423400 Rh5CG115500 Rh5CG380400 Rh5CG380500 Rh5CG445800 Rh5CG447200 Rh5DG370100 Rh5DG370300 Rh5DG436700 Rh5DG438000 Rh5DG534300 Rh6AG004500 Rh6AG005000 Rh6AG005100 Rh6AG005400 Rh6AG005500 Rh6AG085300 Rh6AG143900 Rh6BG005100 Rh6BG005200 Rh6BG005300 Rh6BG144200 Rh6CG003500 Rh6CG074600 Rh6CG140900 Rh6DG003300 Rh6DG071500 Rh6DG128600 Rh7BG040400 Rh7BG040600 Rh7CG026000 Rh7CG042800 Rh7CG433400 Rh7DG040800 Rh7DG040900
rosa_wichuraiana Rw0G012560 Rw1G010810 Rw3G007420 Rw5G032480 Rw5G032500 Rw5G038450 Rw5G038560 Rw6G000490 Rw6G012430 Rw7G003390 Rw7G003400

Restriction Enzyme Sites

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Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 281
Acc36I ACCTGC 1 cut(s) 94
AccB1I GGYRCC 1 cut(s) 293
AccBSI CCGCTC 1 cut(s) 95
AccI GTMKAC 1 cut(s) 107
AccII CGCG 2 cut(s) 56, 1530
AccIII TCCGGA 2 cut(s) 7, 254
AciI CCGC 9 cut(s) 54, 56, 93, 98, 172, 302, 1025, 1528, 1621
AclWI GGATC 2 cut(s) 1869, 1901
AcoI YGGCCR 1 cut(s) 1853
AcsI RAATTY 3 cut(s) 227, 319, 945
AcuI CTGAAG 4 cut(s) 429, 498, 548, 633
AcyI GRCGYC 1 cut(s) 278
AfaI GTAC 4 cut(s) 358, 1288, 1366, 1829
AfiI CCNNNNNNNGG 4 cut(s) 171, 373, 1357, 1934
AflII CTTAAG 1 cut(s) 443
AgeI ACCGGT 1 cut(s) 140
AgsI TTSAA 8 cut(s) 233, 677, 769, 952, 1118, 1190, 1214, 1265
Alw21I GWGCWC 2 cut(s) 249, 1209
Alw26I GTCTC 2 cut(s) 1669, 1808
AlwI GGATC 2 cut(s) 1869, 1901
Ama87I CYCGRG 2 cut(s) 248, 1836
Aor13HI TCCGGA 2 cut(s) 7, 254
AoxI GGCC 4 cut(s) 160, 1618, 1655, 1853
ApaI GGGCCC 1 cut(s) 164
ApeKI GCWGC 5 cut(s) 554, 754, 993, 1136, 1328
ApoI RAATTY 3 cut(s) 227, 319, 945
AsiGI ACCGGT 1 cut(s) 140
AspLEI GCGC 1 cut(s) 1532
AspS9I GGNCC 3 cut(s) 160, 161, 1655
AsuC2I CCSGG 1 cut(s) 832
AsuII TTCGAA 1 cut(s) 1247
AsuNHI GCTAGC 1 cut(s) 656
AvaI CYCGRG 2 cut(s) 248, 1836
AxyI CCTNAGG 1 cut(s) 24
BaeGI GKGCMC 1 cut(s) 164
BanI GGYRCC 1 cut(s) 293
BanII GRGCYC 5 cut(s) 53, 164, 249, 736, 1209
BbsI GAAGAC 4 cut(s) 227, 588, 969, 1239
Bbv12I GWGCWC 2 cut(s) 249, 1209
BbvI GCAGC 5 cut(s) 541, 766, 980, 1123, 1315
BccI CCATC 8 cut(s) 206, 254, 624, 722, 788, 981, 1012, 1877
BceAI ACGGC 1 cut(s) 1840
BcgI CGANNNNNNTGC 2 cut(s) 904, 938
BciVI GTATCC 1 cut(s) 508
BcnI CCSGG 1 cut(s) 832
BcoDI GTCTC 2 cut(s) 1669, 1808
BfaI CTAG 1 cut(s) 657
BfmI CTRYAG 3 cut(s) 851, 1157, 1870
BfrI CTTAAG 1 cut(s) 443
BfuAI ACCTGC 1 cut(s) 94
BfuI GTATCC 1 cut(s) 508
BglII AGATCT 1 cut(s) 1161
BisI GCNGC 7 cut(s) 173, 555, 755, 994, 1137, 1329, 1621
BlsI GCNGC 7 cut(s) 174, 556, 756, 995, 1138, 1330, 1622
BmcAI AGTACT 1 cut(s) 358
Bme1390I CCNGG 1 cut(s) 832
BmeT110I CYCGRG 2 cut(s) 248, 1836
BmgT120I GGNCC 3 cut(s) 160, 161, 1655
BmiI GGNNCC 7 cut(s) 33, 39, 162, 163, 295, 733, 1771
BmrFI CCNGG 1 cut(s) 832
BmsI GCATC 4 cut(s) 775, 901, 1594, 1831
BmtI GCTAGC 1 cut(s) 660
BpiI GAAGAC 4 cut(s) 227, 588, 969, 1239
BplI GAGNNNNNCTC 2 cut(s) 1817, 1849
BpmI CTGGAG 1 cut(s) 1376
Bpu10I CCTNAGC 1 cut(s) 1911
Bpu14I TTCGAA 1 cut(s) 1247
BpuEI CTTGAG 3 cut(s) 722, 1088, 1397
BpuMI CCSGG 1 cut(s) 832
BsaHI GRCGYC 1 cut(s) 278
BsaJI CCNNGG 3 cut(s) 54, 289, 1856
BsaWI WCCGGW 6 cut(s) 7, 34, 140, 254, 323, 500
BsaXI ACNNNNNCTCC 2 cut(s) 1064, 1094
Bsc4I CCNNNNNNNGG 4 cut(s) 171, 373, 1357, 1934
Bse118I RCCGGY 3 cut(s) 40, 140, 148
Bse1I ACTGG 2 cut(s) 885, 901
Bse21I CCTNAGG 1 cut(s) 24
BseAI TCCGGA 2 cut(s) 7, 254
BseDI CCNNGG 3 cut(s) 54, 289, 1856
BseLI CCNNNNNNNGG 4 cut(s) 171, 373, 1357, 1934
BseMII CTCAG 9 cut(s) 15, 128, 374, 711, 1145, 1334, 1437, 1800, 1902
BseNI ACTGG 2 cut(s) 885, 901
BseRI GAGGAG 7 cut(s) 41, 1085, 1156, 1373, 1490, 1502, 1613
BseSI GKGCMC 1 cut(s) 164
BseXI GCAGC 5 cut(s) 541, 766, 980, 1123, 1315
Bsh1236I CGCG 2 cut(s) 56, 1530
BshFI GGCC 4 cut(s) 162, 1620, 1657, 1855
BshNI GGYRCC 1 cut(s) 293
BshTI ACCGGT 1 cut(s) 140
BsiHKAI GWGCWC 2 cut(s) 249, 1209
BsiHKCI CYCGRG 2 cut(s) 248, 1836
BslI CCNNNNNNNGG 4 cut(s) 171, 373, 1357, 1934
BsmAI GTCTC 2 cut(s) 1669, 1808
BsmBI CGTCTC 1 cut(s) 1808
BsmI GAATGC 1 cut(s) 598
BsnI GGCC 4 cut(s) 162, 1620, 1657, 1855
BsoBI CYCGRG 2 cut(s) 248, 1836
Bsp119I TTCGAA 1 cut(s) 1247
Bsp120I GGGCCC 1 cut(s) 160
Bsp1286I GDGCHC 5 cut(s) 53, 164, 249, 736, 1209
Bsp13I TCCGGA 2 cut(s) 7, 254
Bsp1407I TGTACA 1 cut(s) 1364
BspACI CCGC 9 cut(s) 54, 56, 93, 98, 172, 302, 1025, 1528, 1621
BspANI GGCC 4 cut(s) 162, 1620, 1657, 1855
BspCNI CTCAG 9 cut(s) 16, 127, 373, 710, 1144, 1333, 1436, 1801, 1903
BspEI TCCGGA 2 cut(s) 7, 254
BspFNI CGCG 2 cut(s) 56, 1530
BspHI TCATGA 2 cut(s) 70, 460
BspLI GGNNCC 7 cut(s) 33, 39, 162, 163, 295, 733, 1771
BspMAI CTGCAG 1 cut(s) 1161
BspMI ACCTGC 1 cut(s) 94
BspOI GCTAGC 1 cut(s) 660
BspPI GGATC 2 cut(s) 1869, 1901
BspQI GCTCTTC 1 cut(s) 237
BspT104I TTCGAA 1 cut(s) 1247
BspT107I GGYRCC 1 cut(s) 293
BspTI CTTAAG 1 cut(s) 443
BsrBI CCGCTC 1 cut(s) 95
BsrFI RCCGGY 3 cut(s) 40, 140, 148
BsrGI TGTACA 1 cut(s) 1364
BsrI ACTGG 2 cut(s) 885, 901
BssAI RCCGGY 3 cut(s) 40, 140, 148
BssECI CCNNGG 3 cut(s) 54, 289, 1856
BssNI GRCGYC 1 cut(s) 278
BssT1I CCWWGG 1 cut(s) 289
Bst4CI ACNGT 2 cut(s) 368, 1032
BstACI GRCGYC 1 cut(s) 278
BstAFI CTTAAG 1 cut(s) 443
BstAUI TGTACA 1 cut(s) 1364
BstBI TTCGAA 1 cut(s) 1247
BstC8I GCNNGC 4 cut(s) 20, 150, 403, 658
BstDSI CCRYGG 2 cut(s) 54, 1856
BstENI CCTNNNNNAGG 1 cut(s) 1932
BstFNI CGCG 2 cut(s) 56, 1530
BstHHI GCGC 1 cut(s) 1532
BstMAI GTCTC 2 cut(s) 1669, 1808
BstMWI GCNNNNNNNGC 3 cut(s) 617, 1204, 1325
BstSCI CCNGG 1 cut(s) 830
BstSFI CTRYAG 3 cut(s) 851, 1157, 1870
BstSLI GKGCMC 1 cut(s) 164
BstUI CGCG 2 cut(s) 56, 1530
BstV1I GCAGC 5 cut(s) 541, 766, 980, 1123, 1315
BstV2I GAAGAC 4 cut(s) 227, 588, 969, 1239
BstX2I RGATCY 2 cut(s) 1161, 1906
BstYI RGATCY 2 cut(s) 1161, 1906
Bsu36I CCTNAGG 1 cut(s) 24
BsuI GTATCC 1 cut(s) 508
BsuRI GGCC 4 cut(s) 162, 1620, 1657, 1855
BtgI CCRYGG 2 cut(s) 54, 1856
BtsIMutI CAGTG 3 cut(s) 405, 1093, 1806
BveI ACCTGC 1 cut(s) 94
Cac8I GCNNGC 4 cut(s) 20, 150, 403, 658
CciI TCATGA 2 cut(s) 70, 460
CfoI GCGC 1 cut(s) 1532
Cfr10I RCCGGY 3 cut(s) 40, 140, 148
Cfr13I GGNCC 3 cut(s) 160, 161, 1655
Cfr42I CCGCGG 1 cut(s) 57
Csp6I GTAC 4 cut(s) 357, 1287, 1365, 1828
CspAI ACCGGT 1 cut(s) 140
CspCI CAANNNNNGTGG 2 cut(s) 1129, 1164
CviAII CATG 6 cut(s) 71, 461, 959, 1043, 1229, 1553
CviQI GTAC 4 cut(s) 357, 1287, 1365, 1828
EaeI YGGCCR 1 cut(s) 1853
EciI GGCGGA 2 cut(s) 87, 1040
Ecl136II GAGCTC 2 cut(s) 247, 1207
Eco130I CCWWGG 1 cut(s) 289
Eco24I GRGCYC 5 cut(s) 53, 164, 249, 736, 1209
Eco32I GATATC 1 cut(s) 1942
Eco53kI GAGCTC 2 cut(s) 247, 1207
Eco57I CTGAAG 4 cut(s) 429, 498, 548, 633
Eco81I CCTNAGG 1 cut(s) 24
Eco88I CYCGRG 2 cut(s) 248, 1836
EcoICRI GAGCTC 2 cut(s) 247, 1207
EcoNI CCTNNNNNAGG 1 cut(s) 1932
EcoO109I RGGNCCY 2 cut(s) 161, 1655
EcoRI GAATTC 1 cut(s) 319
EcoRV GATATC 1 cut(s) 1942
EcoT14I CCWWGG 1 cut(s) 289
EcoT38I GRGCYC 5 cut(s) 53, 164, 249, 736, 1209
ErhI CCWWGG 1 cut(s) 289
Esp3I CGTCTC 1 cut(s) 1808
FaeI CATG 6 cut(s) 74, 464, 962, 1046, 1232, 1556
FalI AAGNNNNNCTT 2 cut(s) 1182, 1214
FatI CATG 6 cut(s) 70, 460, 958, 1042, 1228, 1552
FauI CCCGC 2 cut(s) 61, 295
FblI GTMKAC 1 cut(s) 107
Fnu4HI GCNGC 7 cut(s) 173, 555, 755, 994, 1137, 1329, 1621
FriOI GRGCYC 5 cut(s) 53, 164, 249, 736, 1209
Fsp4HI GCNGC 7 cut(s) 173, 555, 755, 994, 1137, 1329, 1621
FspBI CTAG 1 cut(s) 657
GlaI GCGC 1 cut(s) 1531
GluI GCNGC 7 cut(s) 173, 555, 755, 994, 1137, 1329, 1621
GsuI CTGGAG 1 cut(s) 1376
HaeIII GGCC 4 cut(s) 162, 1620, 1657, 1855
HhaI GCGC 1 cut(s) 1532
Hin1I GRCGYC 1 cut(s) 278
Hin1II CATG 6 cut(s) 74, 464, 962, 1046, 1232, 1556
Hin6I GCGC 1 cut(s) 1530
HinP1I GCGC 1 cut(s) 1530
HincII GTYRAC 1 cut(s) 108
HindII GTYRAC 1 cut(s) 108
HindIII AAGCTT 1 cut(s) 1196
Hpy166II GTNNAC 4 cut(s) 63, 108, 1091, 1365
Hpy188I TCNGA 4 cut(s) 528, 537, 1014, 1426
Hpy8I GTNNAC 4 cut(s) 63, 108, 1091, 1365
Hpy99I CGWCG 3 cut(s) 109, 112, 1949
HpyAV CCTTC 7 cut(s) 763, 784, 910, 1184, 1271, 1610, 1772
HpyCH4III ACNGT 2 cut(s) 368, 1032
HpyCH4IV ACGT 4 cut(s) 278, 285, 1297, 1801
HpyCH4V TGCA 7 cut(s) 626, 683, 782, 1042, 1159, 1607, 1931
HpyF10VI GCNNNNNNNGC 3 cut(s) 617, 1204, 1325
HpySE526I ACGT 4 cut(s) 278, 285, 1297, 1801
Hsp92I GRCGYC 1 cut(s) 278
Hsp92II CATG 6 cut(s) 74, 464, 962, 1046, 1232, 1556
HspAI GCGC 1 cut(s) 1530
Kpn2I TCCGGA 2 cut(s) 7, 254
KroI GCCGGC 1 cut(s) 148
KroNI GCCGGC 1 cut(s) 150
KspI CCGCGG 1 cut(s) 57
LguI GCTCTTC 1 cut(s) 237
LmnI GCTCC 4 cut(s) 100, 305, 731, 1691
Lsp1109I GCAGC 5 cut(s) 541, 766, 980, 1123, 1315
LweI GCATC 4 cut(s) 775, 901, 1594, 1831
MaeI CTAG 1 cut(s) 657
MaeII ACGT 4 cut(s) 278, 285, 1297, 1801
MaeIII GTNAC 7 cut(s) 76, 329, 376, 481, 1126, 1220, 1894
MbiI CCGCTC 1 cut(s) 95
MfeI CAATTG 1 cut(s) 764
MflI RGATCY 2 cut(s) 1161, 1906
MhlI GDGCHC 5 cut(s) 53, 164, 249, 736, 1209
MluCI AATT 8 cut(s) 227, 319, 764, 945, 1037, 1667, 1699, 1819
MlyI GAGTC 8 cut(s) 73, 106, 260, 541, 1123, 1290, 1415, 1891
MmeI TCCRAC 1 cut(s) 306
MreI CGCCGGCG 1 cut(s) 148
MroI TCCGGA 2 cut(s) 7, 254
MroNI GCCGGC 1 cut(s) 148
MseI TTAA 7 cut(s) 429, 444, 516, 662, 687, 1395, 1951
MslI CAYNNNNRTG 3 cut(s) 726, 1227, 1265
MspA1I CMGCKG 3 cut(s) 56, 554, 1343
MspCI CTTAAG 1 cut(s) 443
MspR9I CCNGG 1 cut(s) 832
MunI CAATTG 1 cut(s) 764
Mva1269I GAATGC 1 cut(s) 598
MvnI CGCG 2 cut(s) 56, 1530
MwoI GCNNNNNNNGC 3 cut(s) 617, 1204, 1325
NaeI GCCGGC 1 cut(s) 150
NciI CCSGG 1 cut(s) 832
NgoMIV GCCGGC 1 cut(s) 148
NheI GCTAGC 1 cut(s) 656
NlaIII CATG 6 cut(s) 74, 464, 962, 1046, 1232, 1556
NlaIV GGNNCC 7 cut(s) 33, 39, 162, 163, 295, 733, 1771
NmuCI GTSAC 7 cut(s) 76, 329, 376, 481, 1126, 1220, 1894
NspV TTCGAA 1 cut(s) 1247
PaeR7I CTCGAG 2 cut(s) 248, 1836
PagI TCATGA 2 cut(s) 70, 460
PciSI GCTCTTC 1 cut(s) 237
PctI GAATGC 1 cut(s) 598
PdiI GCCGGC 1 cut(s) 150
PfeI GAWTC 7 cut(s) 181, 388, 449, 464, 592, 1009, 1381
PinAI ACCGGT 1 cut(s) 140
PkrI GCNGC 7 cut(s) 174, 556, 756, 995, 1138, 1330, 1622
PleI GAGTC 8 cut(s) 73, 106, 259, 540, 1123, 1289, 1415, 1891
PpsI GAGTC 8 cut(s) 73, 106, 259, 540, 1123, 1289, 1415, 1891
Psp124BI GAGCTC 2 cut(s) 249, 1209
PspN4I GGNNCC 7 cut(s) 33, 39, 162, 163, 295, 733, 1771
PspOMI GGGCCC 1 cut(s) 160
PspPI GGNCC 3 cut(s) 160, 161, 1655
PspXI VCTCGAGB 1 cut(s) 248
PstI CTGCAG 1 cut(s) 1161
PsuI RGATCY 2 cut(s) 1161, 1906
PvuII CAGCTG 2 cut(s) 554, 1343
RsaI GTAC 4 cut(s) 358, 1288, 1366, 1829
RsaNI GTAC 4 cut(s) 357, 1287, 1365, 1828
RseI CAYNNNNRTG 3 cut(s) 726, 1227, 1265
SacI GAGCTC 2 cut(s) 249, 1209
SacII CCGCGG 1 cut(s) 57
SalI GTCGAC 1 cut(s) 106
SapI GCTCTTC 1 cut(s) 237
SaqAI TTAA 7 cut(s) 429, 444, 516, 662, 687, 1395, 1951
SatI GCNGC 7 cut(s) 173, 555, 755, 994, 1137, 1329, 1621
Sau96I GGNCC 3 cut(s) 160, 161, 1655
ScaI AGTACT 1 cut(s) 358
SchI GAGTC 8 cut(s) 73, 106, 260, 541, 1123, 1290, 1415, 1891
ScrFI CCNGG 1 cut(s) 832
SduI GDGCHC 5 cut(s) 53, 164, 249, 736, 1209
SfaNI GCATC 4 cut(s) 775, 901, 1594, 1831
SfcI CTRYAG 3 cut(s) 851, 1157, 1870
Sfr274I CTCGAG 2 cut(s) 248, 1836
Sfr303I CCGCGG 1 cut(s) 57
SfuI TTCGAA 1 cut(s) 1247
SgrAI CRCCGGYG 1 cut(s) 148
SgrBI CCGCGG 1 cut(s) 57
SgrDI CGTCGACG 1 cut(s) 106
SlaI CTCGAG 2 cut(s) 248, 1836
SmiMI CAYNNNNRTG 3 cut(s) 726, 1227, 1265
SmlI CTYRAG 6 cut(s) 248, 443, 737, 1067, 1376, 1836
SmoI CTYRAG 6 cut(s) 248, 443, 737, 1067, 1376, 1836
Sse9I AATT 8 cut(s) 227, 319, 764, 945, 1037, 1667, 1699, 1819
SsiI CCGC 9 cut(s) 54, 56, 93, 98, 172, 302, 1025, 1528, 1621
SspMI CTAG 1 cut(s) 657
SstI GAGCTC 2 cut(s) 249, 1209
StyD4I CCNGG 1 cut(s) 830
StyI CCWWGG 1 cut(s) 289
TaaI ACNGT 2 cut(s) 368, 1032
TaiI ACGT 4 cut(s) 281, 288, 1300, 1804
TasI AATT 8 cut(s) 227, 319, 764, 945, 1037, 1667, 1699, 1819
TatI WGTACW 3 cut(s) 356, 1286, 1364
TauI GCSGC 2 cut(s) 175, 1623
TfiI GAWTC 7 cut(s) 181, 388, 449, 464, 592, 1009, 1381
Tru1I TTAA 7 cut(s) 429, 444, 516, 662, 687, 1395, 1951
Tru9I TTAA 7 cut(s) 429, 444, 516, 662, 687, 1395, 1951
TscAI CASTG 3 cut(s) 412, 1093, 1813
TseFI GTSAC 7 cut(s) 76, 329, 376, 481, 1126, 1220, 1894
TseI GCWGC 5 cut(s) 554, 754, 993, 1136, 1328
Tsp45I GTSAC 7 cut(s) 76, 329, 376, 481, 1126, 1220, 1894
TspGWI ACGGA 2 cut(s) 93, 239
TspRI CASTG 3 cut(s) 412, 1093, 1813
Vha464I CTTAAG 1 cut(s) 443
XagI CCTNNNNNAGG 1 cut(s) 1932
XapI RAATTY 3 cut(s) 227, 319, 945
XhoI CTCGAG 2 cut(s) 248, 1836
XmiI GTMKAC 1 cut(s) 107
XspI CTAG 1 cut(s) 657
ZraI GACGTC 1 cut(s) 279
ZrmI AGTACT 1 cut(s) 358
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.