Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000006

Orthogroup ID

OG0000184

Physical Location & Seq

Genomic Coordinates Reverse (-)

42338800 .. 42339882

Gene Structure 1083 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_6G00421100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1083 bp

ATGTATAGGATAGTGCAGTACCATACGAGAAAGCCGAAGAGGTGGTTGTTGCGTTTGGCAAGGCAAGTGGCGACCAAAACGACGACGTCCGGTTCAGAACCATCCACATTCTCATCCCCGTTAGCTTCACTGTCGTGGAAGACTCGGCTGGCGTTGACGCTACTGCCAAAGGTCGACAAGGCCGCTCGTCGCCTTGACGGCACCGTCAACCGCCGTCTCCTAAACCTCGTCGACCCCAAGGCCTCACCAAAGTCCACAAACGGCGTCACCTCCTCCGACGTCATCGTCGACCCCACTCGCAATCTCTGGTTCCGGCTCTTCATCCCGGTCGTCGATATTGACTCCACCGCTCTTCCCGTCATGATTTACTTTCACGGCGGTGGCTTCACGACCTGCAGCCCCTCCTCGATTGCCTACGACGCCTTTTGCCGTAGGTTCGCCTCCACAATCCCCGCCGTCGTAGTTTCCGTCAACTACAGTCTCTCTCCGGAGCACCGCTACCCTTCCCAATGCGACGACGGGTTCGACGTCGTGTCCTTCCTCGGCCAAAACGACGCCGTCCTCCCCAAAAACGCAGACAGATCCCGGATCTTCCTAGCCGGGGACAGCGCCGGCGGCAACCTGGCCCACCACGTGGCGGTGCGCGCCTGTCGGTGTCGGACAGTCAAGTTGACCGGGTTGGTATCTATCCAACCGTTCTTCGGCGGCGAGGAGCGGACCGAGTCCGAGATCCGGCTCGAGAAGGATCCATTGGTCACGGTGACCCTAACCGACTGGTTGTGGAAGGCGTTTCTGCCGGTCGGGTCGACCCGGGACCATGAGGTGTCGAACGTGAGCGGGCCGAACGCGGTGGACATTTCGGGTATGGAGTATCCGGCGACGGTGGTGTTCGTGGGAGGAGCGGATCCGCTGCAGGACTGGCAGAGGAGGTACAATAATTGGTTGAGGAAATCAGGGATTGAGGCCAAGCTGATCGAGTATCCCAATATGTTTCATGGCTTCTATGCTTTTTCAGAGTTGCCTGAGTCGGACCAACTGGTTTGCCGAGTCACAGATTTCGTTGCTTCCACTTCCACCTGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000902 GO:0000904 GO:0003006 GO:0003674 GO:0003824 GO:0008150 GO:0008152 GO:0009056 GO:0009653 GO:0009826 GO:0009856 GO:0009860 GO:0009932 GO:0009987 GO:0016043 GO:0016049 GO:0016787 GO:0016788 GO:0022414 GO:0030154 GO:0032501 GO:0032502 GO:0032989 GO:0040007 GO:0044706 GO:0048468 GO:0048588 GO:0048589 GO:0048856 GO:0048868 GO:0048869 GO:0051704 GO:0052689 GO:0060560 GO:0071840

KEGG Pathways

Metabolic & Signaling

ko04075 ko05134 map04075 map05134

Pfam Domains

Protein Families

Abhydrolase_3

Protein Analysis

360

Amino Acids

39.99

Weight (kDa)

8.92

Isoelectric Point (pI)

47.92

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
COesterase	PF00135	108 - 161	7.6e-06	Carboxylesterase family
BD-FAE	PF20434	115 - 214	2.3e-12	BD-FAE
Abhydrolase_3	PF07859	121 - 335	5.8e-58	alpha/beta hydrolase fold

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000184)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G23530
fragaria_vesca	FvH4_2g00440 FvH4_2g09720 FvH4_3g28580 FvH4_3g28600
malus_domestica	MD00G1203100.v1.1 MD03G1173000.v1.1 MD03G1173100.v1.1 MD05G1060700.v1.1 MD10G1068500.v1.1 MD11G1191000.v1.1
prunus_persica	Prupe.4G252600_v2.0.a1 Prupe.8G004100_v2.0.a1 Prupe.8G090400_v2.0.a1
pyrus_communis	pycom03g13020 pycom05g05160 pycom10g05450
rosa_chinensis	RchiOBHm_Chr2g0154081 RchiOBHm_Chr3g0458401 RchiOBHm_Chr4g0422631 RchiOBHm_Chr5g0013851 RchiOBHm_Chr5g0052531 RchiOBHm_Chr5g0052561 RchiOBHm_Chr5g0062251 RchiOBHm_Chr6g0249211 RchiOBHm_Chr6g0249811 RchiOBHm_Chr6g0250041 RchiOBHm_Chr6g0250061 RchiOBHm_Chr6g0250071 RchiOBHm_Chr6g0250101 RchiOBHm_Chr6g0250261 RchiOBHm_Chr6g0250271 RchiOBHm_Chr6g0250281 RchiOBHm_Chr6g0250341 RchiOBHm_Chr6g0250361 RchiOBHm_Chr6g0266021 RchiOBHm_Chr7g0181171 RchiOBHm_Chr7g0181191
rosa_laevigata	RLG00000002200 RLG00000007738 RLG00000014126 RLG00000014137 RLG00000015547 RLG00000015553 RLG00000019990 RLG00000022548 RLG00000025161 RLG00000034812 RLG00000034813 RLG00000035546
rosa_multiflora	Rmu_co8002032.1_g000001 Rmu_co8108364.1_g000001 Rmu_co8201470.1_g000001 Rmu_co8274775.1_g000001 Rmu_sc0000441.1_g000004 Rmu_sc0000704.1_g000006 Rmu_sc0000704.1_g000038 Rmu_sc0000704.1_g000044 Rmu_sc0000776.1_g000016 Rmu_sc0000830.1_g000025 Rmu_sc0001147.1_g000015 Rmu_sc0001147.1_g000016 Rmu_sc0001209.1_g000044 Rmu_sc0002200.1_g000049 Rmu_sc0002311.1_g000008 Rmu_sc0003627.1_g000015 Rmu_sc0004691.1_g000004 Rmu_sc0005070.1_g000006 Rmu_sc0005798.1_g000012 Rmu_sc0006032.1_g000002 Rmu_sc0006032.1_g000009 Rmu_sc0006110.1_g000003 Rmu_sc0006803.1_g000002 Rmu_sc0007793.1_g000026 Rmu_sc0008209.1_g000004 Rmu_sc0008209.1_g000007 Rmu_sc0009002.1_g000003 Rmu_sc0009002.1_g000008 Rmu_sc0013424.1_g000007 Rmu_sc0013809.1_g000001 Rmu_sc0015580.1_g000005 Rmu_sc0015938.1_g000005 Rmu_sc0022309.1_g000001 Rmu_ssc0000066.1_g000013 Rmu_ssc0000409.1_g000028
rosa_roxburghii	Rroxscaffold_174G00435120 Rroxscaffold_1G00028400 Rroxscaffold_1G00028440 Rroxscaffold_1G00028450 Rroxscaffold_6G00421100 Rroxscaffold_7G00202080 Rroxscaffold_7G00216660 Rroxscaffold_7G00217380
rosa_rugosa	Rorug03G0027600 Rorug05G0270900 Rorug05G0271000 Rorug05G0347300 Rorug05G0494400 Rorug05G0494500 Rorug05G0495500 Rorug06G0022600 Rorug06G0324400 Rorug06G0439500
rosa_samantha	Rh1CG424500 Rh2AG352300 Rh2BG391600 Rh3AG087400 Rh3CG090500 Rh3DG091100 Rh3DG119700 Rh4CG247600 Rh4DG207900 Rh5AG408000 Rh5BG354600 Rh5BG354800 Rh5BG421800 Rh5BG423400 Rh5CG115500 Rh5CG380400 Rh5CG380500 Rh5CG445800 Rh5CG447200 Rh5DG370100 Rh5DG370300 Rh5DG436700 Rh5DG438000 Rh5DG534300 Rh6AG004500 Rh6AG005000 Rh6AG005100 Rh6AG005400 Rh6AG005500 Rh6AG085300 Rh6AG143900 Rh6BG005100 Rh6BG005200 Rh6BG005300 Rh6BG144200 Rh6CG003500 Rh6CG074600 Rh6CG140900 Rh6DG003300 Rh6DG071500 Rh6DG128600 Rh7BG040400 Rh7BG040600 Rh7CG026000 Rh7CG042800 Rh7CG433400 Rh7DG040800 Rh7DG040900
rosa_wichuraiana	Rw0G012560 Rw1G010810 Rw3G007420 Rw5G032480 Rw5G032500 Rw5G038450 Rw5G038560 Rw6G000490 Rw6G012430 Rw7G003390 Rw7G003400

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	203, 284
AatII	GACGTC	3 cut(s)	89, 282, 531
Acc36I	ACCTGC	1 cut(s)	401
AccB1I	GGYRCC	1 cut(s)	200
AccB7I	CCANNNNNTGG	1 cut(s)	634
AccBSI	CCGCTC	5 cut(s)	185, 350, 715, 837, 902
AccI	GTMKAC	4 cut(s)	174, 231, 288, 806
AccII	CGCG	2 cut(s)	645, 848
AccIII	TCCGGA	1 cut(s)	487
AclWI	GGATC	7 cut(s)	576, 596, 724, 740, 753, 899, 912
AcoI	YGGCCR	1 cut(s)	544
AcvI	CACGTG	1 cut(s)	634
AcyI	GRCGYC	6 cut(s)	86, 264, 279, 420, 528, 555
AdeI	CACNNNGTG	1 cut(s)	634
AfaI	GTAC	2 cut(s)	20, 932
AfiI	CCNNNNNNNGG	5 cut(s)	601, 634, 637, 701, 732
AhdI	GACNNNNNGTC	1 cut(s)	532
AjnI	CCWGG	1 cut(s)	621
AjuI	GAANNNNNNNTTGG	2 cut(s)	734, 766
AleI	CACNNNNGTG	2 cut(s)	133, 378
AluBI	AGCT	2 cut(s)	125, 970
AluI	AGCT	2 cut(s)	125, 970
Alw21I	GWGCWC	1 cut(s)	495
Alw26I	GTCTC	2 cut(s)	221, 485
AlwI	GGATC	7 cut(s)	576, 596, 724, 740, 753, 899, 912
Ama87I	CYCGRG	2 cut(s)	737, 810
Aor13HI	TCCGGA	1 cut(s)	487
AoxI	GGCC	6 cut(s)	180, 240, 544, 624, 839, 963
ApeKI	GCWGC	2 cut(s)	396, 910
ArsI	GACNNNNNNTTYG	2 cut(s)	506, 538
AspLEI	GCGC	3 cut(s)	611, 645, 647
AspS9I	GGNCC	5 cut(s)	625, 717, 814, 839, 1030
AsuC2I	CCSGG	6 cut(s)	326, 586, 601, 676, 811, 812
AsuHPI	GGTGA	3 cut(s)	237, 259, 772
AvaI	CYCGRG	2 cut(s)	737, 810
AvaII	GGWCC	3 cut(s)	717, 814, 1030
BamHI	GGATCC	2 cut(s)	745, 904
BanI	GGYRCC	1 cut(s)	200
BbrPI	CACGTG	1 cut(s)	634
BbsI	GAAGAC	1 cut(s)	146
Bbv12I	GWGCWC	1 cut(s)	495
BbvI	GCAGC	2 cut(s)	408, 897
BccI	CCATC	1 cut(s)	109
BceAI	ACGGC	7 cut(s)	198, 214, 277, 391, 414, 440, 542
BciT130I	CCWGG	1 cut(s)	623
BciVI	GTATCC	2 cut(s)	882, 990
BcnI	CCSGG	6 cut(s)	326, 586, 601, 676, 811, 812
BcoDI	GTCTC	2 cut(s)	221, 485
BfaI	CTAG	1 cut(s)	596
BfmI	CTRYAG	3 cut(s)	394, 475, 911
BfoI	RGCGCY	1 cut(s)	612
BfuAI	ACCTGC	1 cut(s)	401
BfuI	GTATCC	2 cut(s)	882, 990
BglI	GCCNNNNNGGC	1 cut(s)	198
BisI	GCNGC	5 cut(s)	183, 397, 616, 706, 911
BlsI	GCNGC	5 cut(s)	184, 398, 617, 707, 912
Bme1390I	CCNGG	7 cut(s)	326, 586, 601, 623, 676, 811, 812
Bme18I	GGWCC	3 cut(s)	717, 814, 1030
BmeRI	GACNNNNNGTC	1 cut(s)	532
BmeT110I	CYCGRG	2 cut(s)	737, 810
BmgT120I	GGNCC	5 cut(s)	625, 717, 814, 839, 1030
BmiI	GGNNCC	5 cut(s)	202, 311, 747, 815, 906
BmrFI	CCNGG	7 cut(s)	326, 586, 601, 623, 676, 811, 812
BpiI	GAAGAC	1 cut(s)	146
BpuMI	CCSGG	6 cut(s)	326, 586, 601, 676, 811, 812
BsaAI	YACGTR	1 cut(s)	634
BsaHI	GRCGYC	6 cut(s)	86, 264, 279, 420, 528, 555
BsaJI	CCNNGG	4 cut(s)	237, 541, 600, 810
BsaWI	WCCGGW	2 cut(s)	89, 487
Bsc4I	CCNNNNNNNGG	5 cut(s)	601, 634, 637, 701, 732
Bse118I	RCCGGY	2 cut(s)	611, 796
Bse1I	ACTGG	3 cut(s)	779, 923, 1041
BseAI	TCCGGA	1 cut(s)	487
BseBI	CCWGG	1 cut(s)	623
BseDI	CCNNGG	4 cut(s)	237, 541, 600, 810
BseGI	GGATG	3 cut(s)	101, 113, 321
BseLI	CCNNNNNNNGG	5 cut(s)	601, 634, 637, 701, 732
BseMII	CTCAG	1 cut(s)	1014
BseNI	ACTGG	3 cut(s)	779, 923, 1041
BsePI	GCGCGC	1 cut(s)	643
BseRI	GAGGAG	5 cut(s)	262, 394, 725, 912, 940
BseXI	GCAGC	2 cut(s)	408, 897
BsgI	GTGCAG	1 cut(s)	35
Bsh1236I	CGCG	2 cut(s)	645, 848
Bsh1285I	CGRYCG	2 cut(s)	330, 801
BshFI	GGCC	6 cut(s)	182, 242, 546, 626, 841, 965
BshNI	GGYRCC	1 cut(s)	200
BsiEI	CGRYCG	2 cut(s)	330, 801
BsiHKAI	GWGCWC	1 cut(s)	495
BsiHKCI	CYCGRG	2 cut(s)	737, 810
BslFI	GGGAC	2 cut(s)	617, 827
BslI	CCNNNNNNNGG	5 cut(s)	601, 634, 637, 701, 732
BsmAI	GTCTC	2 cut(s)	221, 485
BsmBI	CGTCTC	1 cut(s)	221
BsmFI	GGGAC	2 cut(s)	617, 827
BsnI	GGCC	6 cut(s)	182, 242, 546, 626, 841, 965
BsoBI	CYCGRG	2 cut(s)	737, 810
Bsp1286I	GDGCHC	1 cut(s)	495
Bsp13I	TCCGGA	1 cut(s)	487
Bsp143I	GATC	6 cut(s)	581, 588, 729, 745, 904, 972
BspANI	GGCC	6 cut(s)	182, 242, 546, 626, 841, 965
BspCNI	CTCAG	1 cut(s)	1015
BspEI	TCCGGA	1 cut(s)	487
BspFNI	CGCG	2 cut(s)	645, 848
BspHI	TCATGA	1 cut(s)	360
BspLI	GGNNCC	5 cut(s)	202, 311, 747, 815, 906
BspMAI	CTGCAG	2 cut(s)	398, 915
BspMI	ACCTGC	1 cut(s)	401
BspPI	GGATC	7 cut(s)	576, 596, 724, 740, 753, 899, 912
BspQI	GCTCTTC	2 cut(s)	323, 357
BspT107I	GGYRCC	1 cut(s)	200
BsrBI	CCGCTC	5 cut(s)	185, 350, 715, 837, 902
BsrFI	RCCGGY	2 cut(s)	611, 796
BsrI	ACTGG	3 cut(s)	779, 923, 1041
BssAI	RCCGGY	2 cut(s)	611, 796
BssECI	CCNNGG	4 cut(s)	237, 541, 600, 810
BssHII	GCGCGC	1 cut(s)	643
BssMI	GATC	6 cut(s)	581, 588, 729, 745, 904, 972
BssNI	GRCGYC	6 cut(s)	86, 264, 279, 420, 528, 555
BssT1I	CCWWGG	1 cut(s)	237
Bst2UI	CCWGG	1 cut(s)	623
Bst4CI	ACNGT	7 cut(s)	132, 205, 479, 664, 696, 760, 883
Bst6I	CTCTTC	3 cut(s)	32, 323, 357
BstACI	GRCGYC	6 cut(s)	86, 264, 279, 420, 528, 555
BstBAI	YACGTR	1 cut(s)	634
BstC8I	GCNNGC	4 cut(s)	150, 613, 645, 839
BstDEI	CTNAG	1 cut(s)	1023
BstEII	GGTNACC	1 cut(s)	760
BstF5I	GGATG	3 cut(s)	101, 113, 321
BstFNI	CGCG	2 cut(s)	645, 848
BstH2I	RGCGCY	1 cut(s)	612
BstHHI	GCGC	3 cut(s)	611, 645, 647
BstKTI	GATC	6 cut(s)	584, 591, 732, 748, 907, 975
BstMAI	GTCTC	2 cut(s)	221, 485
BstMBI	GATC	6 cut(s)	581, 588, 729, 745, 904, 972
BstMCI	CGRYCG	2 cut(s)	330, 801
BstMWI	GCNNNNNNNGC	5 cut(s)	198, 419, 615, 644, 919
BstNI	CCWGG	1 cut(s)	623
BstPI	GGTNACC	1 cut(s)	760
BstSCI	CCNGG	7 cut(s)	324, 584, 599, 621, 674, 809, 810
BstSFI	CTRYAG	3 cut(s)	394, 475, 911
BstUI	CGCG	2 cut(s)	645, 848
BstV1I	GCAGC	2 cut(s)	408, 897
BstV2I	GAAGAC	1 cut(s)	146
BstX2I	RGATCY	5 cut(s)	581, 588, 729, 745, 904
BstYI	RGATCY	5 cut(s)	581, 588, 729, 745, 904
BsuI	GTATCC	2 cut(s)	882, 990
BsuRI	GGCC	6 cut(s)	182, 242, 546, 626, 841, 965
BtsCI	GGATG	3 cut(s)	101, 113, 321
BtsIMutI	CAGTG	1 cut(s)	128
BveI	ACCTGC	1 cut(s)	401
Cac8I	GCNNGC	4 cut(s)	150, 613, 645, 839
CciI	TCATGA	1 cut(s)	360
CfoI	GCGC	3 cut(s)	611, 645, 647
Cfr10I	RCCGGY	2 cut(s)	611, 796
Cfr13I	GGNCC	5 cut(s)	625, 717, 814, 839, 1030
Cfr9I	CCCGGG	1 cut(s)	810
CpoI	CGGWCCG	1 cut(s)	717
CseI	GACGC	4 cut(s)	166, 253, 428, 563
Csp6I	GTAC	2 cut(s)	19, 931
CspCI	CAANNNNNGTGG	2 cut(s)	48, 83
CspI	CGGWCCG	1 cut(s)	717
CviAII	CATG	3 cut(s)	361, 818, 995
CviQI	GTAC	2 cut(s)	19, 931
DdeI	CTNAG	1 cut(s)	1023
DpnI	GATC	6 cut(s)	583, 590, 731, 747, 906, 974
DpnII	GATC	6 cut(s)	581, 588, 729, 745, 904, 972
DraIII	CACNNNGTG	1 cut(s)	634
DrdI	GACNNNNNNGTC	2 cut(s)	203, 284
DriI	GACNNNNNGTC	1 cut(s)	532
DseDI	GACNNNNNNGTC	2 cut(s)	203, 284
EaeI	YGGCCR	1 cut(s)	544
Eam1104I	CTCTTC	3 cut(s)	32, 323, 357
Eam1105I	GACNNNNNGTC	1 cut(s)	532
EarI	CTCTTC	3 cut(s)	32, 323, 357
Eco130I	CCWWGG	1 cut(s)	237
Eco147I	AGGCCT	1 cut(s)	242
Eco47I	GGWCC	3 cut(s)	717, 814, 1030
Eco72I	CACGTG	1 cut(s)	634
Eco88I	CYCGRG	2 cut(s)	737, 810
Eco91I	GGTNACC	1 cut(s)	760
EcoO65I	GGTNACC	1 cut(s)	760
EcoRII	CCWGG	1 cut(s)	621
EcoT14I	CCWWGG	1 cut(s)	237
ErhI	CCWWGG	1 cut(s)	237
Esp3I	CGTCTC	1 cut(s)	221
FaeI	CATG	3 cut(s)	364, 821, 998
FaiI	YATR	8 cut(s)	6, 24, 362, 819, 866, 989, 996, 1005
FaqI	GGGAC	2 cut(s)	617, 827
FatI	CATG	3 cut(s)	360, 817, 994
FauI	CCCGC	2 cut(s)	460, 830
FblI	GTMKAC	4 cut(s)	174, 231, 288, 806
Fnu4HI	GCNGC	5 cut(s)	183, 397, 616, 706, 911
FokI	GGATG	3 cut(s)	88, 100, 308
Fsp4HI	GCNGC	5 cut(s)	183, 397, 616, 706, 911
FspBI	CTAG	1 cut(s)	596
GlaI	GCGC	3 cut(s)	610, 644, 646
GluI	GCNGC	5 cut(s)	183, 397, 616, 706, 911
HaeII	RGCGCY	1 cut(s)	612
HaeIII	GGCC	6 cut(s)	182, 242, 546, 626, 841, 965
HgaI	GACGC	4 cut(s)	166, 253, 428, 563
HhaI	GCGC	3 cut(s)	611, 645, 647
Hin1I	GRCGYC	6 cut(s)	86, 264, 279, 420, 528, 555
Hin1II	CATG	3 cut(s)	364, 821, 998
Hin6I	GCGC	3 cut(s)	609, 643, 645
HinP1I	GCGC	3 cut(s)	609, 643, 645
HincII	GTYRAC	8 cut(s)	156, 175, 208, 232, 289, 472, 672, 807
HindII	GTYRAC	8 cut(s)	156, 175, 208, 232, 289, 472, 672, 807
HinfI	GANTC	5 cut(s)	142, 341, 722, 1025, 1047
HphI	GGTGA	3 cut(s)	237, 259, 772
Hpy188I	TCNGA	6 cut(s)	97, 277, 660, 727, 1015, 1030
Hpy188III	TCNNGA	4 cut(s)	361, 388, 488, 739
HpyAV	CCTTC	4 cut(s)	513, 547, 736, 778
HpyCH4III	ACNGT	7 cut(s)	132, 205, 479, 664, 696, 760, 883
HpyCH4IV	ACGT	5 cut(s)	86, 279, 528, 633, 831
HpyCH4V	TGCA	3 cut(s)	16, 396, 913
HpyF10VI	GCNNNNNNNGC	5 cut(s)	198, 419, 615, 644, 919
HpyF3I	CTNAG	1 cut(s)	1023
HpySE526I	ACGT	5 cut(s)	86, 279, 528, 633, 831
Hsp92I	GRCGYC	6 cut(s)	86, 264, 279, 420, 528, 555
Hsp92II	CATG	3 cut(s)	364, 821, 998
HspAI	GCGC	3 cut(s)	609, 643, 645
Kpn2I	TCCGGA	1 cut(s)	487
KroI	GCCGGC	1 cut(s)	611
KroNI	GCCGGC	1 cut(s)	613
Kzo9I	GATC	6 cut(s)	581, 588, 729, 745, 904, 972
LguI	GCTCTTC	2 cut(s)	323, 357
LmnI	GCTCC	3 cut(s)	490, 712, 899
Lsp1109I	GCAGC	2 cut(s)	408, 897
MaeI	CTAG	1 cut(s)	596
MaeII	ACGT	5 cut(s)	86, 279, 528, 633, 831
MaeIII	GTNAC	4 cut(s)	265, 754, 760, 1048
MalI	GATC	6 cut(s)	583, 590, 731, 747, 906, 974
MbiI	CCGCTC	5 cut(s)	185, 350, 715, 837, 902
MboI	GATC	6 cut(s)	581, 588, 729, 745, 904, 972
MboII	GAAGA	6 cut(s)	49, 151, 310, 344, 583, 691
MflI	RGATCY	5 cut(s)	581, 588, 729, 745, 904
MhlI	GDGCHC	1 cut(s)	495
MluCI	AATT	1 cut(s)	937
MlyI	GAGTC	5 cut(s)	136, 335, 731, 1034, 1056
MmeI	TCCRAC	4 cut(s)	300, 638, 715, 1008
MreI	CGCCGGCG	1 cut(s)	611
MroI	TCCGGA	1 cut(s)	487
MroNI	GCCGGC	1 cut(s)	611
MseI	TTAA	1 cut(s)	1081
MslI	CAYNNNNRTG	2 cut(s)	133, 378
MspA1I	CMGCKG	1 cut(s)	910
MspR9I	CCNGG	7 cut(s)	326, 586, 601, 623, 676, 811, 812
MvaI	CCWGG	1 cut(s)	623
MvnI	CGCG	2 cut(s)	645, 848
MwoI	GCNNNNNNNGC	5 cut(s)	198, 419, 615, 644, 919
NaeI	GCCGGC	1 cut(s)	613
NciI	CCSGG	6 cut(s)	326, 586, 601, 676, 811, 812
NdeII	GATC	6 cut(s)	581, 588, 729, 745, 904, 972
NgoMIV	GCCGGC	1 cut(s)	611
NlaIII	CATG	3 cut(s)	364, 821, 998
NlaIV	GGNNCC	5 cut(s)	202, 311, 747, 815, 906
NmeAIII	GCCGAG	3 cut(s)	124, 522, 1070
NmuCI	GTSAC	4 cut(s)	265, 754, 760, 1048
OliI	CACNNNNGTG	2 cut(s)	133, 378
PaeR7I	CTCGAG	1 cut(s)	737
PagI	TCATGA	1 cut(s)	360
PauI	GCGCGC	1 cut(s)	643
PceI	AGGCCT	1 cut(s)	242
PciSI	GCTCTTC	2 cut(s)	323, 357
PcsI	WCGNNNNNNNCGW	6 cut(s)	32, 285, 465, 522, 525, 549
PdiI	GCCGGC	1 cut(s)	613
PflFI	GACNNNGTC	3 cut(s)	85, 557, 721
PflMI	CCANNNNNTGG	1 cut(s)	634
PfoI	TCCNGGA	1 cut(s)	584
PkrI	GCNGC	5 cut(s)	184, 398, 617, 707, 912
PleI	GAGTC	5 cut(s)	136, 335, 730, 1033, 1055
PmaCI	CACGTG	1 cut(s)	634
PmlI	CACGTG	1 cut(s)	634
PpsI	GAGTC	5 cut(s)	136, 335, 730, 1033, 1055
Ppu21I	YACGTR	1 cut(s)	634
Psp6I	CCWGG	1 cut(s)	621
PspCI	CACGTG	1 cut(s)	634
PspEI	GGTNACC	1 cut(s)	760
PspGI	CCWGG	1 cut(s)	621
PspN4I	GGNNCC	5 cut(s)	202, 311, 747, 815, 906
PspPI	GGNCC	5 cut(s)	625, 717, 814, 839, 1030
PstI	CTGCAG	2 cut(s)	398, 915
PsuI	RGATCY	5 cut(s)	581, 588, 729, 745, 904
PsyI	GACNNNGTC	3 cut(s)	85, 557, 721
PteI	GCGCGC	1 cut(s)	643
RsaI	GTAC	2 cut(s)	20, 932
RsaNI	GTAC	2 cut(s)	19, 931
RseI	CAYNNNNRTG	2 cut(s)	133, 378
Rsr2I	CGGWCCG	1 cut(s)	717
RsrII	CGGWCCG	1 cut(s)	717
SalI	GTCGAC	4 cut(s)	173, 230, 287, 805
SapI	GCTCTTC	2 cut(s)	323, 357
SaqAI	TTAA	1 cut(s)	1081
SatI	GCNGC	5 cut(s)	183, 397, 616, 706, 911
Sau3AI	GATC	6 cut(s)	581, 588, 729, 745, 904, 972
Sau96I	GGNCC	5 cut(s)	625, 717, 814, 839, 1030
SchI	GAGTC	5 cut(s)	136, 335, 731, 1034, 1056
ScrFI	CCNGG	7 cut(s)	326, 586, 601, 623, 676, 811, 812
SduI	GDGCHC	1 cut(s)	495
SfcI	CTRYAG	3 cut(s)	394, 475, 911
Sfr274I	CTCGAG	1 cut(s)	737
SgrAI	CRCCGGYG	1 cut(s)	611
SinI	GGWCC	3 cut(s)	717, 814, 1030
SlaI	CTCGAG	1 cut(s)	737
SmaI	CCCGGG	1 cut(s)	812
SmiMI	CAYNNNNRTG	2 cut(s)	133, 378
SmlI	CTYRAG	1 cut(s)	737
SmoI	CTYRAG	1 cut(s)	737
Sse9I	AATT	1 cut(s)	937
SseBI	AGGCCT	1 cut(s)	242
SspMI	CTAG	1 cut(s)	596
StuI	AGGCCT	1 cut(s)	242
StyD4I	CCNGG	7 cut(s)	324, 584, 599, 621, 674, 809, 810
StyI	CCWWGG	1 cut(s)	237
TaaI	ACNGT	7 cut(s)	132, 205, 479, 664, 696, 760, 883
TaiI	ACGT	5 cut(s)	89, 282, 531, 636, 834
TaqII	GACCGA	1 cut(s)	734
TasI	AATT	1 cut(s)	937
TauI	GCSGC	3 cut(s)	185, 618, 708
Tru1I	TTAA	1 cut(s)	1081
Tru9I	TTAA	1 cut(s)	1081
TscAI	CASTG	1 cut(s)	135
TseFI	GTSAC	4 cut(s)	265, 754, 760, 1048
TseI	GCWGC	2 cut(s)	396, 910
Tsp45I	GTSAC	4 cut(s)	265, 754, 760, 1048
TspDTI	ATGAA	2 cut(s)	310, 983
TspGWI	ACGGA	1 cut(s)	457
TspMI	CCCGGG	1 cut(s)	810
TspRI	CASTG	1 cut(s)	135
Tth111I	GACNNNGTC	3 cut(s)	85, 557, 721
Van91I	CCANNNNNTGG	1 cut(s)	634
VpaK11BI	GGWCC	3 cut(s)	717, 814, 1030
XhoI	CTCGAG	1 cut(s)	737
XmaI	CCCGGG	1 cut(s)	810
XmiI	GTMKAC	4 cut(s)	174, 231, 288, 806
XspI	CTAG	1 cut(s)	596
ZraI	GACGTC	3 cut(s)	87, 280, 529

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.