AT5G23530

Carboxylesterase family

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
Physical Location & Seq
Reverse (-)
7932966 .. 7934547
1582 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G23530.1

Sequence Viewer

Length: 1008 bp
ATGGCGACAGATTCTCAACCAAACCAAAAGCTAACGCTTCCGTTAAAAACAAGAATCGCTCTCACCGTTATCTCCACCATGACCGATAACGCTCAACGTCCTGACGGAACTATCAACCGCCGTTTCCTCCGCCTCTTCGATTTCCGTGCTCCTCCCAATCCTAAACCCGTCAACATCGTCTCCACCTCCGATTTCGTCGTGGATCAATCCCGTGATCTCTGGTTCCGATTGTACACTCCACATGTCTCCGGCGATAAAATCCCCGTCGTTGTTTTCTTCCACGGCGGTGGTTTCGCTTTCCTCAGTCCTAATGCGTATCCTTACGATAATGTATGCCGGAGATTCGCTAGGAAATTACCTGCTTATGTCATCTCCGTTAACTACCGTCTCGCTCCGGAGCATCGTTATCCTGCTCAATACGACGACGGTTTCGATGCTTTGAAGTACATCGAGGAGAATCACGGTTCGATTCTTCCGGCGAACGCTGATCTCTCGAGATGCTTCTTCGCCGGAGACAGTGCAGGTGGAAACATCGCGCACAACGTCGCGATTCGAATTTGTCGCGAGCCGCGGTCATCTTTCACCGCCGTGAAACTCATCGGACTTATCTCGATTCAACCTTTCTTCGGCGGAGAAGAGAGAACGGAAGCGGAGAAACAACTCGTCGGAGCTCCTTTGGTTTCACCGGACCGAACAGATTGGTGCTGGAAAGCGATGGGATTAAACCGGGATCATGAAGCGGTTAACGTCGGCGGACCAAACGCGGTTGATATATCGGGTCTGGATTATCCGGAGACGATGGTGGTAGTAGCTGGGTTTGATCCGTTAAAAGATTGGCAGAGAAGTTACTACGAGTGGTTAAAGTTATGCGGTAAAAAAGCAACGTTAATCGAATATCCAAACATGTTTCATGCGTTTTACATTTTCCCTGAATTGCCTGAGGCGGGTCAGTTAATTATGCGGATTAAGGATTTTGTTGATGAGCGCGTGGCTTCGCTCTCCGCTTAA

Protein Analysis

335

Amino Acids

37.71

Weight (kDa)

6.66

Isoelectric Point (pI)

44.09

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
COesterase PF00135 76 - 131 9.4e-06 Carboxylesterase family
BD-FAE PF20434 77 - 183 7.6e-13 BD-FAE
Abhydrolase_3 PF07859 90 - 307 2.9e-58 alpha/beta hydrolase fold
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000184)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G23530
fragaria_vesca FvH4_2g00440 FvH4_2g09720 FvH4_3g28580 FvH4_3g28600
malus_domestica MD00G1203100.v1.1 MD03G1173000.v1.1 MD03G1173100.v1.1 MD05G1060700.v1.1 MD10G1068500.v1.1 MD11G1191000.v1.1
prunus_persica Prupe.4G252600_v2.0.a1 Prupe.8G004100_v2.0.a1 Prupe.8G090400_v2.0.a1
pyrus_communis pycom03g13020 pycom05g05160 pycom10g05450
rosa_chinensis RchiOBHm_Chr2g0154081 RchiOBHm_Chr3g0458401 RchiOBHm_Chr4g0422631 RchiOBHm_Chr5g0013851 RchiOBHm_Chr5g0052531 RchiOBHm_Chr5g0052561 RchiOBHm_Chr5g0062251 RchiOBHm_Chr6g0249211 RchiOBHm_Chr6g0249811 RchiOBHm_Chr6g0250041 RchiOBHm_Chr6g0250061 RchiOBHm_Chr6g0250071 RchiOBHm_Chr6g0250101 RchiOBHm_Chr6g0250261 RchiOBHm_Chr6g0250271 RchiOBHm_Chr6g0250281 RchiOBHm_Chr6g0250341 RchiOBHm_Chr6g0250361 RchiOBHm_Chr6g0266021 RchiOBHm_Chr7g0181171 RchiOBHm_Chr7g0181191
rosa_laevigata RLG00000002200 RLG00000007738 RLG00000014126 RLG00000014137 RLG00000015547 RLG00000015553 RLG00000019990 RLG00000022548 RLG00000025161 RLG00000034812 RLG00000034813 RLG00000035546
rosa_multiflora Rmu_co8002032.1_g000001 Rmu_co8108364.1_g000001 Rmu_co8201470.1_g000001 Rmu_co8274775.1_g000001 Rmu_sc0000441.1_g000004 Rmu_sc0000704.1_g000006 Rmu_sc0000704.1_g000038 Rmu_sc0000704.1_g000044 Rmu_sc0000776.1_g000016 Rmu_sc0000830.1_g000025 Rmu_sc0001147.1_g000015 Rmu_sc0001147.1_g000016 Rmu_sc0001209.1_g000044 Rmu_sc0002200.1_g000049 Rmu_sc0002311.1_g000008 Rmu_sc0003627.1_g000015 Rmu_sc0004691.1_g000004 Rmu_sc0005070.1_g000006 Rmu_sc0005798.1_g000012 Rmu_sc0006032.1_g000002 Rmu_sc0006032.1_g000009 Rmu_sc0006110.1_g000003 Rmu_sc0006803.1_g000002 Rmu_sc0007793.1_g000026 Rmu_sc0008209.1_g000004 Rmu_sc0008209.1_g000007 Rmu_sc0009002.1_g000003 Rmu_sc0009002.1_g000008 Rmu_sc0013424.1_g000007 Rmu_sc0013809.1_g000001 Rmu_sc0015580.1_g000005 Rmu_sc0015938.1_g000005 Rmu_sc0022309.1_g000001 Rmu_ssc0000066.1_g000013 Rmu_ssc0000409.1_g000028
rosa_roxburghii Rroxscaffold_174G00435120 Rroxscaffold_1G00028400 Rroxscaffold_1G00028440 Rroxscaffold_1G00028450 Rroxscaffold_6G00421100 Rroxscaffold_7G00202080 Rroxscaffold_7G00216660 Rroxscaffold_7G00217380
rosa_rugosa Rorug03G0027600 Rorug05G0270900 Rorug05G0271000 Rorug05G0347300 Rorug05G0494400 Rorug05G0494500 Rorug05G0495500 Rorug06G0022600 Rorug06G0324400 Rorug06G0439500
rosa_samantha Rh1CG424500 Rh2AG352300 Rh2BG391600 Rh3AG087400 Rh3CG090500 Rh3DG091100 Rh3DG119700 Rh4CG247600 Rh4DG207900 Rh5AG408000 Rh5BG354600 Rh5BG354800 Rh5BG421800 Rh5BG423400 Rh5CG115500 Rh5CG380400 Rh5CG380500 Rh5CG445800 Rh5CG447200 Rh5DG370100 Rh5DG370300 Rh5DG436700 Rh5DG438000 Rh5DG534300 Rh6AG004500 Rh6AG005000 Rh6AG005100 Rh6AG005400 Rh6AG005500 Rh6AG085300 Rh6AG143900 Rh6BG005100 Rh6BG005200 Rh6BG005300 Rh6BG144200 Rh6CG003500 Rh6CG074600 Rh6CG140900 Rh6DG003300 Rh6DG071500 Rh6DG128600 Rh7BG040400 Rh7BG040600 Rh7CG026000 Rh7CG042800 Rh7CG433400 Rh7DG040800 Rh7DG040900
rosa_wichuraiana Rw0G012560 Rw1G010810 Rw3G007420 Rw5G032480 Rw5G032500 Rw5G038450 Rw5G038560 Rw6G000490 Rw6G012430 Rw7G003390 Rw7G003400

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 512
Acc36I ACCTGC 2 cut(s) 367, 512
AccII CGCG 6 cut(s) 536, 548, 564, 571, 764, 987
AccIII TCCGGA 2 cut(s) 394, 790
AclI AACGTT 1 cut(s) 884
AclWI GGATC 3 cut(s) 210, 738, 815
AcsI RAATTY 1 cut(s) 555
AfaI GTAC 2 cut(s) 233, 446
AfiI CCNNNNNNNGG 2 cut(s) 626, 944
AflIII ACRYGT 2 cut(s) 241, 903
AgsI TTSAA 2 cut(s) 442, 617
AleI CACNNNNGTG 2 cut(s) 285, 587
AluBI AGCT 3 cut(s) 31, 671, 812
AluI AGCT 3 cut(s) 31, 671, 812
Alw21I GWGCWC 2 cut(s) 151, 673
Alw26I GTCTC 5 cut(s) 184, 250, 392, 507, 788
AlwI GGATC 3 cut(s) 210, 738, 815
Ama87I CYCGRG 1 cut(s) 493
Aor13HI TCCGGA 2 cut(s) 394, 790
ApoI RAATTY 1 cut(s) 555
ArsI GACNNNNNNTTYG 2 cut(s) 413, 445
AspLEI GCGC 2 cut(s) 538, 987
AspS9I GGNCC 2 cut(s) 688, 755
AsuC2I CCSGG 1 cut(s) 728
AsuHPI GGTGA 3 cut(s) 55, 574, 675
AsuII TTCGAA 1 cut(s) 553
AvaI CYCGRG 1 cut(s) 493
AvaII GGWCC 2 cut(s) 688, 755
AxyI CCTNAGG 1 cut(s) 939
BanII GRGCYC 1 cut(s) 673
Bbv12I GWGCWC 2 cut(s) 151, 673
BccI CCATC 2 cut(s) 709, 793
BceAI ACGGC 3 cut(s) 105, 298, 572
BcgI CGANNNNNNTGC 2 cut(s) 128, 162
BciVI GTATCC 1 cut(s) 327
BcnI CCSGG 1 cut(s) 728
BcoDI GTCTC 5 cut(s) 184, 250, 392, 507, 788
BfaI CTAG 1 cut(s) 348
BfuAI ACCTGC 2 cut(s) 367, 512
BfuI GTATCC 1 cut(s) 327
BisI GCNGC 1 cut(s) 569
BlsI GCNGC 1 cut(s) 570
Bme1390I CCNGG 1 cut(s) 728
Bme18I GGWCC 2 cut(s) 688, 755
BmeT110I CYCGRG 1 cut(s) 493
BmgT120I GGNCC 2 cut(s) 688, 755
BmiI GGNNCC 1 cut(s) 224
BmrFI CCNGG 1 cut(s) 728
BmsI GCATC 3 cut(s) 409, 424, 488
Bpu14I TTCGAA 1 cut(s) 553
BpuMI CCSGG 1 cut(s) 728
BsaJI CCNNGG 2 cut(s) 280, 569
BsaWI WCCGGW 3 cut(s) 394, 685, 790
BsaXI ACNNNNNCTCC 2 cut(s) 164, 194
Bsc4I CCNNNNNNNGG 2 cut(s) 626, 944
Bse21I CCTNAGG 1 cut(s) 939
BseAI TCCGGA 2 cut(s) 394, 790
BseDI CCNNGG 2 cut(s) 280, 569
BseLI CCNNNNNNNGG 2 cut(s) 626, 944
BseMII CTCAG 2 cut(s) 316, 930
BseRI GAGGAG 2 cut(s) 141, 467
BseYI CCCAGC 1 cut(s) 812
BsgI GTGCAG 1 cut(s) 540
Bsh1236I CGCG 6 cut(s) 536, 548, 564, 571, 764, 987
BsiHKAI GWGCWC 2 cut(s) 151, 673
BsiHKCI CYCGRG 1 cut(s) 493
BsiSI CCGG 8 cut(s) 249, 337, 395, 476, 510, 686, 727, 791
BslI CCNNNNNNNGG 2 cut(s) 626, 944
BsmAI GTCTC 5 cut(s) 184, 250, 392, 507, 788
BsmBI CGTCTC 3 cut(s) 184, 392, 788
BsoBI CYCGRG 1 cut(s) 493
Bsp119I TTCGAA 1 cut(s) 553
Bsp1286I GDGCHC 2 cut(s) 151, 673
Bsp13I TCCGGA 2 cut(s) 394, 790
Bsp1407I TGTACA 1 cut(s) 231
Bsp143I GATC 5 cut(s) 202, 214, 487, 730, 820
Bsp68I TCGCGA 2 cut(s) 548, 564
BspCNI CTCAG 2 cut(s) 315, 931
BspEI TCCGGA 2 cut(s) 394, 790
BspFNI CGCG 6 cut(s) 536, 548, 564, 571, 764, 987
BspHI TCATGA 1 cut(s) 733
BspLI GGNNCC 1 cut(s) 224
BspMI ACCTGC 2 cut(s) 367, 512
BspPI GGATC 3 cut(s) 210, 738, 815
BspT104I TTCGAA 1 cut(s) 553
BsrGI TGTACA 1 cut(s) 231
BssECI CCNNGG 2 cut(s) 280, 569
BssMI GATC 5 cut(s) 202, 214, 487, 730, 820
Bst4CI ACNGT 5 cut(s) 67, 386, 428, 464, 518
Bst6I CTCTTC 2 cut(s) 140, 630
BstAUI TGTACA 1 cut(s) 231
BstBI TTCGAA 1 cut(s) 553
BstC8I GCNNGC 1 cut(s) 566
BstDEI CTNAG 2 cut(s) 302, 939
BstDSI CCRYGG 2 cut(s) 280, 569
BstFNI CGCG 6 cut(s) 536, 548, 564, 571, 764, 987
BstHHI GCGC 2 cut(s) 538, 987
BstKTI GATC 5 cut(s) 205, 217, 490, 733, 823
BstMAI GTCTC 5 cut(s) 184, 250, 392, 507, 788
BstMBI GATC 5 cut(s) 202, 214, 487, 730, 820
BstNSI RCATGY 2 cut(s) 245, 907
BstSCI CCNGG 1 cut(s) 726
BstUI CGCG 6 cut(s) 536, 548, 564, 571, 764, 987
BstXI CCANNNNNNTGG 1 cut(s) 287
Bsu36I CCTNAGG 1 cut(s) 939
BsuI GTATCC 1 cut(s) 327
BtgI CCRYGG 2 cut(s) 280, 569
BtgZI GCGATG 2 cut(s) 517, 728
BtsIMutI CAGTG 1 cut(s) 523
BtuMI TCGCGA 2 cut(s) 548, 564
BveI ACCTGC 2 cut(s) 367, 512
Cac8I GCNNGC 1 cut(s) 566
CciI TCATGA 1 cut(s) 733
CfoI GCGC 2 cut(s) 538, 987
Cfr13I GGNCC 2 cut(s) 688, 755
Cfr42I CCGCGG 1 cut(s) 572
CpoI CGGWCCG 1 cut(s) 688
Csp6I GTAC 2 cut(s) 232, 445
CspI CGGWCCG 1 cut(s) 688
CviAII CATG 5 cut(s) 79, 242, 734, 904, 911
CviJI RGCY 5 cut(s) 31, 568, 671, 812, 992
CviKI_1 RGCY 5 cut(s) 31, 568, 671, 812, 992
CviQI GTAC 2 cut(s) 232, 445
DdeI CTNAG 2 cut(s) 302, 939
DpnI GATC 5 cut(s) 204, 216, 489, 732, 822
DpnII GATC 5 cut(s) 202, 214, 487, 730, 820
Eam1104I CTCTTC 2 cut(s) 140, 630
EarI CTCTTC 2 cut(s) 140, 630
EciI GGCGGA 3 cut(s) 119, 645, 768
Ecl136II GAGCTC 1 cut(s) 671
Eco24I GRGCYC 1 cut(s) 673
Eco47I GGWCC 2 cut(s) 688, 755
Eco53kI GAGCTC 1 cut(s) 671
Eco81I CCTNAGG 1 cut(s) 939
Eco88I CYCGRG 1 cut(s) 493
EcoICRI GAGCTC 1 cut(s) 671
EcoT38I GRGCYC 1 cut(s) 673
Esp3I CGTCTC 3 cut(s) 184, 392, 788
FaeI CATG 5 cut(s) 82, 245, 737, 907, 914
FatI CATG 5 cut(s) 78, 241, 733, 903, 910
FauI CCCGC 1 cut(s) 937
Fnu4HI GCNGC 1 cut(s) 569
FriOI GRGCYC 1 cut(s) 673
Fsp4HI GCNGC 1 cut(s) 569
FspBI CTAG 1 cut(s) 348
GlaI GCGC 2 cut(s) 537, 986
GluI GCNGC 1 cut(s) 569
GsaI CCCAGC 1 cut(s) 816
HapII CCGG 8 cut(s) 249, 337, 395, 476, 510, 686, 727, 791
HhaI GCGC 2 cut(s) 538, 987
Hin1II CATG 5 cut(s) 82, 245, 737, 907, 914
Hin6I GCGC 2 cut(s) 536, 985
HinP1I GCGC 2 cut(s) 536, 985
HincII GTYRAC 3 cut(s) 172, 379, 745
HindII GTYRAC 3 cut(s) 172, 379, 745
HinfI GANTC 7 cut(s) 11, 54, 342, 457, 469, 550, 613
HpaI GTTAAC 2 cut(s) 379, 745
HpaII CCGG 8 cut(s) 249, 337, 395, 476, 510, 686, 727, 791
HphI GGTGA 3 cut(s) 55, 574, 675
Hpy166II GTNNAC 4 cut(s) 172, 234, 379, 745
Hpy188I TCNGA 4 cut(s) 190, 227, 602, 668
Hpy8I GTNNAC 4 cut(s) 172, 234, 379, 745
Hpy99I CGWCG 7 cut(s) 200, 269, 425, 428, 548, 668, 752
HpyCH4III ACNGT 5 cut(s) 67, 386, 428, 464, 518
HpyCH4IV ACGT 4 cut(s) 97, 543, 747, 884
HpyCH4V TGCA 1 cut(s) 521
HpyF3I CTNAG 2 cut(s) 302, 939
HpySE526I ACGT 4 cut(s) 97, 543, 747, 884
Hsp92II CATG 5 cut(s) 82, 245, 737, 907, 914
HspAI GCGC 2 cut(s) 536, 985
Kpn2I TCCGGA 2 cut(s) 394, 790
KspAI GTTAAC 2 cut(s) 379, 745
KspI CCGCGG 1 cut(s) 572
Kzo9I GATC 5 cut(s) 202, 214, 487, 730, 820
LmnI GCTCC 5 cut(s) 154, 397, 397, 668, 676
LweI GCATC 3 cut(s) 409, 424, 488
MaeI CTAG 1 cut(s) 348
MaeII ACGT 4 cut(s) 97, 543, 747, 884
MaeIII GTNAC 1 cut(s) 845
MalI GATC 5 cut(s) 204, 216, 489, 732, 822
MboI GATC 5 cut(s) 202, 214, 487, 730, 820
MboII GAAGA 6 cut(s) 127, 268, 464, 496, 616, 647
MhlI GDGCHC 2 cut(s) 151, 673
MluCI AATT 4 cut(s) 353, 555, 932, 954
MmeI TCCRAC 1 cut(s) 646
MnlI CCTC 7 cut(s) 137, 143, 162, 196, 311, 445, 934
MroI TCCGGA 2 cut(s) 394, 790
MslI CAYNNNNRTG 2 cut(s) 285, 587
MspA1I CMGCKG 1 cut(s) 571
MspI CCGG 8 cut(s) 249, 337, 395, 476, 510, 686, 727, 791
MspR9I CCNGG 1 cut(s) 728
MvnI CGCG 6 cut(s) 536, 548, 564, 571, 764, 987
NciI CCSGG 1 cut(s) 728
NdeII GATC 5 cut(s) 202, 214, 487, 730, 820
NlaIII CATG 5 cut(s) 82, 245, 737, 907, 914
NlaIV GGNNCC 1 cut(s) 224
NruI TCGCGA 2 cut(s) 548, 564
NspI RCATGY 2 cut(s) 245, 907
NspV TTCGAA 1 cut(s) 553
OliI CACNNNNGTG 2 cut(s) 285, 587
PaeR7I CTCGAG 1 cut(s) 493
PagI TCATGA 1 cut(s) 733
PaqCI CACCTGC 1 cut(s) 512
PciI ACATGT 2 cut(s) 241, 903
PcsI WCGNNNNNNNCGW 3 cut(s) 63, 429, 540
PfeI GAWTC 7 cut(s) 11, 54, 342, 457, 469, 550, 613
PkrI GCNGC 1 cut(s) 570
PscI ACATGT 2 cut(s) 241, 903
Psp124BI GAGCTC 1 cut(s) 673
Psp1406I AACGTT 1 cut(s) 884
PspFI CCCAGC 1 cut(s) 812
PspN4I GGNNCC 1 cut(s) 224
PspPI GGNCC 2 cut(s) 688, 755
RruI TCGCGA 2 cut(s) 548, 564
RsaI GTAC 2 cut(s) 233, 446
RsaNI GTAC 2 cut(s) 232, 445
RseI CAYNNNNRTG 2 cut(s) 285, 587
Rsr2I CGGWCCG 1 cut(s) 688
RsrII CGGWCCG 1 cut(s) 688
SacI GAGCTC 1 cut(s) 673
SacII CCGCGG 1 cut(s) 572
SatI GCNGC 1 cut(s) 569
Sau3AI GATC 5 cut(s) 202, 214, 487, 730, 820
Sau96I GGNCC 2 cut(s) 688, 755
ScrFI CCNGG 1 cut(s) 728
SduI GDGCHC 2 cut(s) 151, 673
SfaNI GCATC 3 cut(s) 409, 424, 488
Sfr274I CTCGAG 1 cut(s) 493
Sfr303I CCGCGG 1 cut(s) 572
SfuI TTCGAA 1 cut(s) 553
SgrBI CCGCGG 1 cut(s) 572
SinI GGWCC 2 cut(s) 688, 755
SlaI CTCGAG 1 cut(s) 493
SmiMI CAYNNNNRTG 2 cut(s) 285, 587
SmlI CTYRAG 1 cut(s) 493
SmoI CTYRAG 1 cut(s) 493
Sse9I AATT 4 cut(s) 353, 555, 932, 954
SspMI CTAG 1 cut(s) 348
SstI GAGCTC 1 cut(s) 673
StyD4I CCNGG 1 cut(s) 726
TaaI ACNGT 5 cut(s) 67, 386, 428, 464, 518
TaiI ACGT 4 cut(s) 100, 546, 750, 887
TaqI TCGA 8 cut(s) 138, 432, 450, 467, 494, 553, 611, 891
TaqII GACCGA 2 cut(s) 98, 705
TasI AATT 4 cut(s) 353, 555, 932, 954
TatI WGTACW 2 cut(s) 231, 444
TauI GCSGC 1 cut(s) 571
TfiI GAWTC 7 cut(s) 11, 54, 342, 457, 469, 550, 613
TscAI CASTG 1 cut(s) 523
TspDTI ATGAA 2 cut(s) 750, 899
TspGWI ACGGA 6 cut(s) 30, 120, 134, 364, 659, 813
TspRI CASTG 1 cut(s) 523
VpaK11BI GGWCC 2 cut(s) 688, 755
XapI RAATTY 1 cut(s) 555
XceI RCATGY 2 cut(s) 245, 907
XhoI CTCGAG 1 cut(s) 493
XspI CTAG 1 cut(s) 348
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.