Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr15

Orthogroup ID

OG0001013

Physical Location & Seq

Genomic Coordinates Reverse (-)

339992 .. 345434

Gene Structure 5443 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD15G1006000.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1692 bp

ATGGAAGACACCGAGAGTTTCTGTAACAGGCCCGCTGACTTTTTGCCCGCTCCGACCCGAAAGCAGAAGCTGAAAGTGAGCATTTACAATGAAGTCCTTGGTCGGCTCCAGGACTCCGATGTCGGAGAGGCCAAGGTTCCTGGTTTCGAAGATGAACTGTGGGCCCATTTCAGTCGCCTCCCCACTAGATATGCGTTGGATGTGAATGTGGAGAGGGCACAAGATGTTCTGATGCATAAGAGATTACTGCATATGGCGCATGACCCGGCCACTAGACCTGCAGTCCAAGTTCGTCTTGTGCAGGTTCGTTCTGCTTCCGGCTCAAATTCATCGAGGAAAGCGAATGCTCAATGTTCTGCTGCTGCCAGCAAAGAGAGTCATCCACCGCCAGCTTTTGGTTTGTCACCAGACCTTCAACTTGCTCTTGAAGCTGAACAGTTACACGTTGACCAGGGCGATAACTCTGTGTATGCCAGTCAACTTTTTACAAGGTCGATGCATGAAATTACTATTTCCACGAATGACAAGCCCAAACTCCTCAGTGAGTTGACATCCTTATTATCTGACATTGGATTGAACATTCAAGAAGCACATGCTTATTCCACAACAGATGGCTACTCTTTGGATGTCTTTGTTGTTGATGGTTGGCCATGTGAGGAAACTGAGAGGCTTAGGCATGCACTGGCAAAACAAATACCATGGAATGAGAAGAATCCTTCATTGGACTGTAACATCATTTCTCCTCCTCCGGATCAAGAGACTGGAATGGAGTTTATTAATGATCATGTAAGCACACTCAATGAGGAAAAGGATGTCTGGGAAATTGATGCAAGCATGTTGAGATATGAGGAGAAAATTGCATCTGGATCGAATGGTGATTTGTATCAAGGTAGTTACTGTGGTCGAGATGTGGCTATTAAAGTTCTTAGCACTGAGCGCCTGAATGAAACTATGAAGGAGTTTACTCAAGAAGTCTATATTATGAGAAAAGTTCGGCACAAGAATGTCGTTCAATTTATTGGGGCATGCACTAAACCTCCTAAGCTTTGCATCATTACTGAATTTCTGTCTGGTGGAAGTATGTATGACTTTCTGCATAAGCAAAGGGGTGTTTTATCACTTCTGTCCTTGCTCAGAGTCGCAATTGATGTTTCCAGGGGAATGAACTACTTGCACCAAAACAATATAATCCATAGGGACTTGAAAGCTGCTAATCTTTTGATGGACGGAACTGGAGTAGTGAAAGTAGCTGATTTCGGCATCGCTAGAGTACGGGCAGAGTCTGGTGTTATGACTGCAGAAACTGGCACTTACCGTTGGATGGCTCCCGAGGTTATAGAACATAGGCCATACAATCATAAAGCTGATGTTTTTAGCTTTGGGGTTGTTCTCTGGGAGCTGCTTACAGGGAAGCTTCCCTACGAGAACTTAACTCCGTTACAAGCAGCAGTTGGCGTAGTCCAGAAGGGTCTGAGGCCTACAATTCCGAGCCACACGAATCCAATGCTGATGGAACTGATGGAGAGATGCTGGCAGCAAGACCCATCATTGAGACCGGAATTTTCAGAAATTGTAAATATGTTGCAGCACTTGGCCAGGAAGGTTGCAAAGGGAAGTGAGGATAGACGAAAGGGAAAATCAGCTAAAGTAGTACCTACTTTCAAGCAAGGCGGTGATGGTAGTGCCAAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009987 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0023052 GO:0035556 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko01521 ko01522 ko04010 ko04012 ko04013 ko04015 ko04024 ko04062 ko04068 ko04150 ko04214 ko04270 ko04320 ko04510 ko04650 ko04720 ko04722 ko04726 ko04730 ko04810 ko04910 ko04914 ko04934 ko05034 ko05160 ko05200 ko05205 ko05210 ko05211 ko05212 ko05213 ko05214 ko05215 ko05216 ko05218 ko05219 ko05220 ko05221 ko05223 ko05224 ko05225 ko05226 map01521 map01522 map04010 map04012 map04013 map04015 map04024 map04062 map04068 map04150 map04214 map04270 map04320 map04510 map04650 map04720 map04722 map04726 map04730 map04810 map04910 map04914 map04934 map05034 map05160 map05200 map05205 map05210 map05211 map05212 map05213 map05214 map05215 map05216 map05218 map05219 map05220 map05221 map05223 map05224 map05225 map05226

Pfam Domains

Protein Families

ACT Pkinase_Tyr

Protein Analysis

564

Amino Acids

63.01

Weight (kDa)

6.25

Isoelectric Point (pI)

44.03

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PK_Tyr_Ser-Thr	PF07714	281 - 528	2.3e-73	Protein tyrosine and serine/threonine kinase
Pkinase	PF00069	282 - 526	1.2e-56	Protein kinase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001013)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G38470 AT4G38470 AT4G38470
fragaria_vesca	FvH4_2g15800 FvH4_2g15800 FvH4_2g15800 FvH4_2g15800 FvH4_2g15800 FvH4_2g15800 FvH4_2g15800 FvH4_2g15800 FvH4_2g37880 FvH4_2g37880 FvH4_2g37880 FvH4_2g37880 FvH4_2g37880 FvH4_2g37880 FvH4_2g37880 FvH4_2g37880 FvH4_2g37880 FvH4_2g37880 FvH4_2g37880 FvH4_2g37880 FvH4_2g37880 FvH4_2g37880
malus_domestica	MD05G1126800.v1.1 MD10G1130000.v1.1 MD10G1130300.v1.1 MD15G1006000.v1.1
prunus_persica	Prupe.1G358800_v2.0.a1 Prupe.8G170600_v2.0.a1 Prupe.8G170600_v2.0.a1 Prupe.8G170600_v2.0.a1
pyrus_communis	pycom05g12270 pycom15g00460
rosa_chinensis	RchiOBHm_Chr6g0279141 RchiOBHm_Chr6g0303741
rosa_laevigata	RLG00000011050 RLG00000013163
rosa_multiflora	Rmu_co8370501.1_g000001 Rmu_sc0006400.1_g000001 Rmu_sc0009053.1_g000001 Rmu_sc0012878.1_g000007 Rmu_sc0014203.1_g000019
rosa_roxburghii	Rroxscaffold_7G00164440 Rroxscaffold_7G00189090
rosa_rugosa	Rorug06G0122600 Rorug06G0122700 Rorug06G0122800 Rorug06G0122900 Rorug06G0324400
rosa_samantha	Rh6AG231400 Rh6AG438700 Rh6BG236300 Rh6BG464400 Rh6CG238400 Rh6CG451000 Rh6DG229900 Rh6DG437800
rosa_wichuraiana	Rw6G020260 Rw6G037980

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	119
Acc36I	ACCTGC	2 cut(s)	286, 292
AccB7I	CCANNNNNTGG	1 cut(s)	395
AccBSI	CCGCTC	1 cut(s)	50
AccIII	TCCGGA	1 cut(s)	748
AciI	CCGC	4 cut(s)	33, 48, 386, 1671
AclWI	GGATC	2 cut(s)	759, 874
AcoI	YGGCCR	3 cut(s)	267, 647, 1593
AcsI	RAATTY	3 cut(s)	325, 1061, 1559
AfaI	GTAC	2 cut(s)	1272, 1653
AfiI	CCNNNNNNNGG	2 cut(s)	395, 1321
AflIII	ACRYGT	1 cut(s)	442
AgsI	TTSAA	7 cut(s)	416, 428, 577, 584, 1013, 1204, 1663
AhdI	GACNNNNNGTC	1 cut(s)	281
AjnI	CCWGG	5 cut(s)	108, 139, 450, 1154, 1595
AjuI	GAANNNNNNNTTGG	2 cut(s)	704, 736
Alw26I	GTCTC	2 cut(s)	752, 1546
AlwI	GGATC	2 cut(s)	759, 874
AlwNI	CAGNNNCTG	3 cut(s)	70, 1283, 1304
Ama87I	CYCGRG	1 cut(s)	1328
Aor13HI	TCCGGA	1 cut(s)	748
AoxI	GGCC	8 cut(s)	29, 129, 162, 267, 647, 1346, 1475, 1593
ApaI	GGGCCC	1 cut(s)	166
ApeKI	GCWGC	7 cut(s)	359, 362, 1208, 1399, 1445, 1534, 1585
ApoI	RAATTY	3 cut(s)	325, 1061, 1559
AseI	ATTAAT	1 cut(s)	777
AspLEI	GCGC	2 cut(s)	259, 939
AspS9I	GGNCC	3 cut(s)	30, 162, 163
AsuC2I	CCSGG	1 cut(s)	266
AsuHPI	GGTGA	3 cut(s)	396, 887, 1685
AsuII	TTCGAA	1 cut(s)	147
AvaI	CYCGRG	1 cut(s)	1328
BaeGI	GKGCMC	2 cut(s)	166, 220
BalI	TGGCCA	2 cut(s)	649, 1595
BanII	GRGCYC	1 cut(s)	166
BarI	GAAGNNNNNNTAC	2 cut(s)	1403, 1435
BbsI	GAAGAC	1 cut(s)	12
BbvI	GCAGC	7 cut(s)	346, 349, 1195, 1386, 1457, 1546, 1597
BccI	CCATC	8 cut(s)	605, 635, 1216, 1315, 1504, 1513, 1552, 1670
BcgI	CGANNNNNNTGC	4 cut(s)	849, 883, 1486, 1520
BciT130I	CCWGG	5 cut(s)	110, 141, 452, 1156, 1597
BclI	TGATCA	1 cut(s)	781
BcnI	CCSGG	1 cut(s)	266
BcoDI	GTCTC	2 cut(s)	752, 1546
BfaI	CTAG	3 cut(s)	186, 273, 1266
BfmI	CTRYAG	2 cut(s)	279, 1296
BfoI	RGCGCY	1 cut(s)	940
BfuAI	ACCTGC	2 cut(s)	286, 292
BisI	GCNGC	7 cut(s)	360, 363, 1209, 1400, 1446, 1535, 1586
BlsI	GCNGC	7 cut(s)	361, 364, 1210, 1401, 1447, 1536, 1587
Bme1390I	CCNGG	6 cut(s)	110, 141, 266, 452, 1156, 1597
BmeRI	GACNNNNNGTC	1 cut(s)	281
BmeT110I	CYCGRG	1 cut(s)	1328
BmgT120I	GGNCC	3 cut(s)	30, 162, 163
BmiI	GGNNCC	4 cut(s)	107, 138, 164, 1326
BmrFI	CCNGG	6 cut(s)	110, 141, 266, 452, 1156, 1597
BmsI	GCATC	7 cut(s)	222, 486, 817, 869, 1059, 1269, 1517
BpiI	GAAGAC	1 cut(s)	12
BpmI	CTGGAG	2 cut(s)	92, 1254
Bpu10I	CCTNAGC	2 cut(s)	671, 1041
Bpu14I	TTCGAA	1 cut(s)	147
BpuEI	CTTGAG	1 cut(s)	951
BpuMI	CCSGG	1 cut(s)	266
BsaBI	GATNNNNATC	1 cut(s)	882
BsaI	GGTCTC	1 cut(s)	1546
BsaJI	CCNNGG	6 cut(s)	97, 132, 451, 698, 1155, 1329
BsaWI	WCCGGW	2 cut(s)	748, 1555
BsaXI	ACNNNNNCTCC	2 cut(s)	1021, 1051
Bsc4I	CCNNNNNNNGG	2 cut(s)	395, 1321
Bse1I	ACTGG	5 cut(s)	474, 687, 766, 1237, 1309
Bse8I	GATNNNNATC	1 cut(s)	882
BseAI	TCCGGA	1 cut(s)	748
BseBI	CCWGG	5 cut(s)	110, 141, 452, 1156, 1597
BseDI	CCNNGG	6 cut(s)	97, 132, 451, 698, 1155, 1329
BseGI	GGATG	6 cut(s)	205, 379, 551, 631, 817, 1326
BseJI	GATNNNNATC	1 cut(s)	882
BseLI	CCNNNNNNNGG	2 cut(s)	395, 1321
BseMII	CTCAG	5 cut(s)	553, 654, 924, 1147, 1463
BseNI	ACTGG	5 cut(s)	474, 687, 766, 1237, 1309
BseRI	GAGGAG	4 cut(s)	527, 732, 735, 863
BseSI	GKGCMC	2 cut(s)	166, 220
BseXI	GCAGC	7 cut(s)	346, 349, 1195, 1386, 1457, 1546, 1597
BsgI	GTGCAG	1 cut(s)	320
BshFI	GGCC	8 cut(s)	31, 131, 164, 269, 649, 1348, 1477, 1595
BsiHKCI	CYCGRG	1 cut(s)	1328
BsiSI	CCGG	4 cut(s)	266, 318, 749, 1556
BslFI	GGGAC	1 cut(s)	1211
BslI	CCNNNNNNNGG	2 cut(s)	395, 1321
BsmAI	GTCTC	2 cut(s)	752, 1546
BsmFI	GGGAC	1 cut(s)	1211
BsmI	GAATGC	1 cut(s)	349
BsnI	GGCC	8 cut(s)	31, 131, 164, 269, 649, 1348, 1477, 1595
Bso31I	GGTCTC	1 cut(s)	1546
BsoBI	CYCGRG	1 cut(s)	1328
Bsp119I	TTCGAA	1 cut(s)	147
Bsp120I	GGGCCC	1 cut(s)	162
Bsp1286I	GDGCHC	2 cut(s)	166, 220
Bsp13I	TCCGGA	1 cut(s)	748
Bsp143I	GATC	3 cut(s)	751, 781, 866
Bsp19I	CCATGG	1 cut(s)	698
BspACI	CCGC	4 cut(s)	33, 48, 386, 1671
BspANI	GGCC	8 cut(s)	31, 131, 164, 269, 649, 1348, 1477, 1595
BspCNI	CTCAG	5 cut(s)	552, 655, 925, 1146, 1464
BspEI	TCCGGA	1 cut(s)	748
BspLI	GGNNCC	4 cut(s)	107, 138, 164, 1326
BspMAI	CTGCAG	2 cut(s)	283, 1300
BspMI	ACCTGC	2 cut(s)	286, 292
BspPI	GGATC	2 cut(s)	759, 874
BspT104I	TTCGAA	1 cut(s)	147
BspTNI	GGTCTC	1 cut(s)	1546
BsrBI	CCGCTC	1 cut(s)	50
BsrI	ACTGG	5 cut(s)	474, 687, 766, 1237, 1309
BssECI	CCNNGG	6 cut(s)	97, 132, 451, 698, 1155, 1329
BssMI	GATC	3 cut(s)	751, 781, 866
BssT1I	CCWWGG	3 cut(s)	97, 132, 698
Bst2UI	CCWGG	5 cut(s)	110, 141, 452, 1156, 1597
Bst4CI	ACNGT	5 cut(s)	159, 438, 728, 899, 1316
BstBI	TTCGAA	1 cut(s)	147
BstC8I	GCNNGC	8 cut(s)	33, 48, 367, 390, 678, 832, 1027, 1532
BstDEI	CTNAG	8 cut(s)	539, 663, 671, 926, 933, 1041, 1133, 1472
BstDSI	CCRYGG	1 cut(s)	698
BstF5I	GGATG	6 cut(s)	205, 379, 551, 631, 817, 1326
BstH2I	RGCGCY	1 cut(s)	940
BstHHI	GCGC	2 cut(s)	259, 939
BstKTI	GATC	3 cut(s)	754, 784, 869
BstMAI	GTCTC	2 cut(s)	752, 1546
BstMBI	GATC	3 cut(s)	751, 781, 866
BstMWI	GCNNNNNNNGC	3 cut(s)	256, 428, 936
BstNI	CCWGG	5 cut(s)	110, 141, 452, 1156, 1597
BstNSI	RCATGY	4 cut(s)	596, 680, 838, 1029
BstSCI	CCNGG	6 cut(s)	108, 139, 264, 450, 1154, 1595
BstSFI	CTRYAG	2 cut(s)	279, 1296
BstSLI	GKGCMC	2 cut(s)	166, 220
BstV1I	GCAGC	7 cut(s)	346, 349, 1195, 1386, 1457, 1546, 1597
BstV2I	GAAGAC	1 cut(s)	12
BsuRI	GGCC	8 cut(s)	31, 131, 164, 269, 649, 1348, 1477, 1595
BtgI	CCRYGG	1 cut(s)	698
BtgZI	GCGATG	1 cut(s)	1246
BtsCI	GGATG	6 cut(s)	205, 379, 551, 631, 817, 1326
BtsIMutI	CAGTG	3 cut(s)	547, 680, 930
BveI	ACCTGC	2 cut(s)	286, 292
Cac8I	GCNNGC	8 cut(s)	33, 48, 367, 390, 678, 832, 1027, 1532
CaiI	CAGNNNCTG	3 cut(s)	70, 1283, 1304
CfoI	GCGC	2 cut(s)	259, 939
Cfr13I	GGNCC	3 cut(s)	30, 162, 163
Csp6I	GTAC	2 cut(s)	1271, 1652
CviAII	CATG	9 cut(s)	260, 500, 593, 651, 677, 699, 785, 835, 1026
CviQI	GTAC	2 cut(s)	1271, 1652
DdeI	CTNAG	8 cut(s)	539, 663, 671, 926, 933, 1041, 1133, 1472
DpnI	GATC	3 cut(s)	753, 783, 868
DpnII	GATC	3 cut(s)	751, 781, 866
DrdI	GACNNNNNNGTC	1 cut(s)	119
DriI	GACNNNNNGTC	1 cut(s)	281
DseDI	GACNNNNNNGTC	1 cut(s)	119
EaeI	YGGCCR	3 cut(s)	267, 647, 1593
Eam1105I	GACNNNNNGTC	1 cut(s)	281
Eco130I	CCWWGG	3 cut(s)	97, 132, 698
Eco147I	AGGCCT	1 cut(s)	1477
Eco24I	GRGCYC	1 cut(s)	166
Eco31I	GGTCTC	1 cut(s)	1546
Eco88I	CYCGRG	1 cut(s)	1328
EcoRII	CCWGG	5 cut(s)	108, 139, 450, 1154, 1595
EcoT14I	CCWWGG	3 cut(s)	97, 132, 698
EcoT22I	ATGCAT	2 cut(s)	237, 501
EcoT38I	GRGCYC	1 cut(s)	166
ErhI	CCWWGG	3 cut(s)	97, 132, 698
FaeI	CATG	9 cut(s)	263, 503, 596, 654, 680, 702, 788, 838, 1029
FalI	AAGNNNNNCTT	2 cut(s)	279, 311
FaqI	GGGAC	1 cut(s)	1211
FatI	CATG	9 cut(s)	259, 499, 592, 650, 676, 698, 784, 834, 1025
FauI	CCCGC	2 cut(s)	40, 55
FauNDI	CATATG	1 cut(s)	252
FbaI	TGATCA	1 cut(s)	781
Fnu4HI	GCNGC	7 cut(s)	360, 363, 1209, 1400, 1446, 1535, 1586
FokI	GGATG	6 cut(s)	212, 366, 538, 638, 824, 1333
FriOI	GRGCYC	1 cut(s)	166
Fsp4HI	GCNGC	7 cut(s)	360, 363, 1209, 1400, 1446, 1535, 1586
FspBI	CTAG	3 cut(s)	186, 273, 1266
GlaI	GCGC	2 cut(s)	258, 938
GluI	GCNGC	7 cut(s)	360, 363, 1209, 1400, 1446, 1535, 1586
GsuI	CTGGAG	2 cut(s)	92, 1254
HaeII	RGCGCY	1 cut(s)	940
HaeIII	GGCC	8 cut(s)	31, 131, 164, 269, 649, 1348, 1477, 1595
HapII	CCGG	4 cut(s)	266, 318, 749, 1556
HhaI	GCGC	2 cut(s)	259, 939
Hin1II	CATG	9 cut(s)	263, 503, 596, 654, 680, 702, 788, 838, 1029
Hin6I	GCGC	2 cut(s)	257, 937
HinP1I	GCGC	2 cut(s)	257, 937
HincII	GTYRAC	3 cut(s)	448, 479, 549
HindII	GTYRAC	3 cut(s)	448, 479, 549
HindIII	AAGCTT	2 cut(s)	1043, 1412
HinfI	GANTC	6 cut(s)	113, 376, 712, 1137, 1280, 1498
HpaII	CCGG	4 cut(s)	266, 318, 749, 1556
HphI	GGTGA	3 cut(s)	396, 887, 1685
Hpy166II	GTNNAC	4 cut(s)	448, 479, 549, 963
Hpy188I	TCNGA	9 cut(s)	54, 118, 125, 231, 565, 1136, 1473, 1488, 1567
Hpy188III	TCNNGA	9 cut(s)	425, 584, 749, 755, 864, 905, 968, 1328, 1462
Hpy8I	GTNNAC	4 cut(s)	448, 479, 549, 963
HpyAV	CCTTC	5 cut(s)	422, 726, 949, 1459, 1594
HpyCH4III	ACNGT	5 cut(s)	159, 438, 728, 899, 1316
HpyCH4IV	ACGT	1 cut(s)	444
HpyF10VI	GCNNNNNNNGC	3 cut(s)	256, 428, 936
HpyF3I	CTNAG	8 cut(s)	539, 663, 671, 926, 933, 1041, 1133, 1472
HpySE526I	ACGT	1 cut(s)	444
Hsp92II	CATG	9 cut(s)	263, 503, 596, 654, 680, 702, 788, 838, 1029
HspAI	GCGC	2 cut(s)	257, 937
Kpn2I	TCCGGA	1 cut(s)	748
Ksp22I	TGATCA	1 cut(s)	781
Kzo9I	GATC	3 cut(s)	751, 781, 866
LmnI	GCTCC	4 cut(s)	55, 111, 1330, 1396
Lsp1109I	GCAGC	7 cut(s)	346, 349, 1195, 1386, 1457, 1546, 1597
LweI	GCATC	7 cut(s)	222, 486, 817, 869, 1059, 1269, 1517
MaeI	CTAG	3 cut(s)	186, 273, 1266
MaeII	ACGT	1 cut(s)	444
MaeIII	GTNAC	6 cut(s)	23, 402, 438, 728, 893, 1437
MalI	GATC	3 cut(s)	753, 783, 868
MbiI	CCGCTC	1 cut(s)	50
MboI	GATC	3 cut(s)	751, 781, 866
MboII	GAAGA	3 cut(s)	17, 161, 721
MfeI	CAATTG	1 cut(s)	1143
MhlI	GDGCHC	2 cut(s)	166, 220
MlsI	TGGCCA	2 cut(s)	649, 1595
MluNI	TGGCCA	2 cut(s)	649, 1595
MlyI	GAGTC	4 cut(s)	107, 385, 1146, 1289
MmeI	TCCRAC	4 cut(s)	77, 103, 177, 1298
Mox20I	TGGCCA	2 cut(s)	649, 1595
Mph1103I	ATGCAT	2 cut(s)	237, 501
MroI	TCCGGA	1 cut(s)	748
MscI	TGGCCA	2 cut(s)	649, 1595
MseI	TTAA	3 cut(s)	777, 918, 1430
MslI	CAYNNNNRTG	1 cut(s)	1002
Msp20I	TGGCCA	2 cut(s)	649, 1595
MspA1I	CMGCKG	1 cut(s)	35
MspI	CCGG	4 cut(s)	266, 318, 749, 1556
MspR9I	CCNGG	6 cut(s)	110, 141, 266, 452, 1156, 1597
MunI	CAATTG	1 cut(s)	1143
Mva1269I	GAATGC	1 cut(s)	349
MvaI	CCWGG	5 cut(s)	110, 141, 452, 1156, 1597
MwoI	GCNNNNNNNGC	3 cut(s)	256, 428, 936
NciI	CCSGG	1 cut(s)	266
NcoI	CCATGG	1 cut(s)	698
NdeI	CATATG	1 cut(s)	252
NdeII	GATC	3 cut(s)	751, 781, 866
NlaIII	CATG	9 cut(s)	263, 503, 596, 654, 680, 702, 788, 838, 1029
NlaIV	GGNNCC	4 cut(s)	107, 138, 164, 1326
NmuCI	GTSAC	1 cut(s)	402
NsiI	ATGCAT	2 cut(s)	237, 501
NspI	RCATGY	4 cut(s)	596, 680, 838, 1029
NspV	TTCGAA	1 cut(s)	147
PaeI	GCATGC	2 cut(s)	680, 1029
PceI	AGGCCT	1 cut(s)	1477
PcsI	WCGNNNNNNNCGW	1 cut(s)	338
PctI	GAATGC	1 cut(s)	349
PfeI	GAWTC	2 cut(s)	712, 1498
PflMI	CCANNNNNTGG	1 cut(s)	395
PfoI	TCCNGGA	1 cut(s)	108
PkrI	GCNGC	7 cut(s)	361, 364, 1210, 1401, 1447, 1536, 1587
PleI	GAGTC	4 cut(s)	107, 384, 1145, 1288
PpsI	GAGTC	4 cut(s)	107, 384, 1145, 1288
PshBI	ATTAAT	1 cut(s)	777
Psp6I	CCWGG	5 cut(s)	108, 139, 450, 1154, 1595
PspGI	CCWGG	5 cut(s)	108, 139, 450, 1154, 1595
PspN4I	GGNNCC	4 cut(s)	107, 138, 164, 1326
PspOMI	GGGCCC	1 cut(s)	162
PspPI	GGNCC	3 cut(s)	30, 162, 163
PstI	CTGCAG	2 cut(s)	283, 1300
PstNI	CAGNNNCTG	3 cut(s)	70, 1283, 1304
RsaI	GTAC	2 cut(s)	1272, 1653
RsaNI	GTAC	2 cut(s)	1271, 1652
RseI	CAYNNNNRTG	1 cut(s)	1002
SaqAI	TTAA	3 cut(s)	777, 918, 1430
SatI	GCNGC	7 cut(s)	360, 363, 1209, 1400, 1446, 1535, 1586
Sau3AI	GATC	3 cut(s)	751, 781, 866
Sau96I	GGNCC	3 cut(s)	30, 162, 163
SchI	GAGTC	4 cut(s)	107, 385, 1146, 1289
ScrFI	CCNGG	6 cut(s)	110, 141, 266, 452, 1156, 1597
SduI	GDGCHC	2 cut(s)	166, 220
SfaNI	GCATC	7 cut(s)	222, 486, 817, 869, 1059, 1269, 1517
SfcI	CTRYAG	2 cut(s)	279, 1296
SfuI	TTCGAA	1 cut(s)	147
SmiMI	CAYNNNNRTG	1 cut(s)	1002
SmlI	CTYRAG	1 cut(s)	966
SmoI	CTYRAG	1 cut(s)	966
SphI	GCATGC	2 cut(s)	680, 1029
SseBI	AGGCCT	1 cut(s)	1477
SsiI	CCGC	4 cut(s)	33, 48, 386, 1671
SspMI	CTAG	3 cut(s)	186, 273, 1266
StuI	AGGCCT	1 cut(s)	1477
StyD4I	CCNGG	6 cut(s)	108, 139, 264, 450, 1154, 1595
StyI	CCWWGG	3 cut(s)	97, 132, 698
TaaI	ACNGT	5 cut(s)	159, 438, 728, 899, 1316
TaiI	ACGT	1 cut(s)	447
TaqI	TCGA	5 cut(s)	147, 332, 494, 869, 904
TfiI	GAWTC	2 cut(s)	712, 1498
Tru1I	TTAA	3 cut(s)	777, 918, 1430
Tru9I	TTAA	3 cut(s)	777, 918, 1430
TscAI	CASTG	3 cut(s)	547, 687, 937
TseFI	GTSAC	1 cut(s)	402
TseI	GCWGC	7 cut(s)	359, 362, 1208, 1399, 1445, 1534, 1585
Tsp45I	GTSAC	1 cut(s)	402
TspDTI	ATGAA	8 cut(s)	105, 168, 318, 516, 708, 960, 968, 1178
TspGWI	ACGGA	2 cut(s)	1242, 1425
TspRI	CASTG	3 cut(s)	547, 687, 937
Van91I	CCANNNNNTGG	1 cut(s)	395
VspI	ATTAAT	1 cut(s)	777
XapI	RAATTY	3 cut(s)	325, 1061, 1559
XceI	RCATGY	4 cut(s)	596, 680, 838, 1029
XspI	CTAG	3 cut(s)	186, 273, 1266
Zsp2I	ATGCAT	2 cut(s)	237, 501

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.