MD10G1130300.v1.1

Serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr10
Physical Location & Seq
Reverse (-)
21060196 .. 21068645
8450 bp
Loading structure...
UTR
Exon/CDS
Intron
MD10G1130300.v1.1.491

Sequence Viewer

Length: 1731 bp
ATGGTGACGAAGAACAACAGCGAGAGCTGCGGGAGTAGAGCGCTGAACAACTCGTCGTCTTCTCCGGCTCAGTCTCGCCAGCAGGGGCAGAAGCTCGGGGTTTACAATGAGGTCCTCCGCCGCCTCAAGGACTCCAAAAACGACGAAGCTATTCGCCCTGGCTTCGACGACGAGCTTTGGGCTCACTTCAATCGCCTCCCCACTCGGTATGCATTGGATGTGAATGTGGAGAGGGCAGAAGATGTGCTTATGCACAAAAGATTACTGCATTTGGCTCATGATCCCGCTCATAGACCAGCGATCGAAGTCCGCCTTGTACAGGTTCATTCTATCGCAGATATGAGTGCAGCAGATACTATGAATACAGATCCTCCGGGTAAAGATGCTGCCCAAAGTTCAAACATATCTACCAGACAAAGTATACATCCCCCTCCAGCGTTTGGCTCATCTCCTAACCTCGAAGCCCTTGCACTTGAGGCAAATAAATCTGAAGATCATGATGCTGAACATGCTGTACATGCCAGAACTCAGTTTACTTGGCCCATAACGCATGAAATCACTTTCTCAACAGATGATAAGCCAAAACTACTCAGTCAGTTAACTTCCTTGCTTGCGGAGATTGGGCTGAACATCCAAGAAGCACATGCTTTTTCCACATTAGATGGTTACTCCTTGGATGTCTTTGTTGTTGATGGATGGCGTTACGAGGAAACAGAGAAGCTTAAGATCGCAATACAAAAGGAAGTTATAAAGATTGAGAGGCCGTGGCCGCCAACTCATCAATCATCATCTTTTGGCAGCGAGCATGATCAAGTAGTGATCAAAACTGAACCTGATCATCTGGAAATACCTAATGATGGGACTGATGTATGGGAACTTGATCCTAGACAGTTGAAGTTTGGGAATAAAGTTGCATCTGGGTCCTGTGGAGATTTATATAAAGGTACATATTGTACTCAAGAAGTTGCCATTAAAGTCCTCAAGCCCGAGTGTGTAAATCCAGATATGCTTAAAGATTTTGCCCAGGAAGTCTACATTATGAGGAAAGTTCGACACAAGAATGTTGTACAATTCATTGGTGCGTGTACCAAGCATCCAAGCTTGTGCATTGTAACAGAATATATGCCCGGTGGAAGTGTGTATGACTACTTGCATAAACAAAAGGGAGTTTTTAAGCTTCCATCCTTGCTCAAGGTCGCAATTGATGTTTCCAAGGGAATGACCTACTTGCATCAAAATAACATAATCCACAGGGATTTAAAAGCCGCCAATCTCTTGATGGATGAAAATGAAGTTGTTAAGGTTGCTGATTTCGGGGTTGCTAGAGTAAAATCTCAATCTGGAGTAATGACAGCAGAAACTGGGACTTATAGGTGGATGGCTCCAGAGGTTATAGAACACAAGCCATATGATCACAAGGCGGATATTTTTAGCTTTGGAGTTGTGTTATGGGAGTTACTGACTGGAAAGCTTCCATATGAATACTTGACCCCGTTACAAGCAGCCGTCGGAGTTTCCCAAAAGGGCTTACGGCCGACCATCCCAAAGAATGCTCCTCCCAAGCTTGCCGAGCTGCTCGAAAAATGCTGGCAGCAAGATCCAGCATCAAGACCTGATTTCTCAGAAATCATAGAGATTCTGCAGACATTAGCCGAAGAGGTTGGTGATGGAGTGGAACGACACAAATCATCGGGAGGATTTCTGTCCGTCCTGAGACGGGGTCATCACTAA

Protein Analysis

577

Amino Acids

64.46

Weight (kDa)

6.09

Isoelectric Point (pI)

51.42

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PK_Tyr_Ser-Thr PF07714 298 - 547 5.9e-75 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 301 - 544 2.9e-59 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 749
AccB7I CCANNNNNTGG 1 cut(s) 440
AccBSI CCGCTC 1 cut(s) 287
AccI GTMKAC 2 cut(s) 421, 1032
AciI CCGC 9 cut(s) 30, 118, 121, 285, 310, 614, 770, 1266, 1421
AclWI GGATC 4 cut(s) 275, 362, 875, 1592
AcoI YGGCCR 2 cut(s) 767, 1532
AcuI CTGAAG 1 cut(s) 510
AfaI GTAC 6 cut(s) 318, 516, 946, 955, 1068, 1087
AfeI AGCGCT 1 cut(s) 42
AfiI CCNNNNNNNGG 5 cut(s) 127, 319, 440, 857, 1717
AflII CTTAAG 1 cut(s) 722
AgsI TTSAA 3 cut(s) 190, 399, 895
AjnI CCWGG 2 cut(s) 157, 1023
Alw26I GTCTC 2 cut(s) 78, 1708
AlwI GGATC 4 cut(s) 275, 362, 875, 1592
AlwNI CAGNNNCTG 1 cut(s) 1361
Ama87I CYCGRG 2 cut(s) 95, 986
Aor51HI AGCGCT 1 cut(s) 42
AoxI GGCC 4 cut(s) 539, 761, 767, 1532
ApeKI GCWGC 7 cut(s) 27, 347, 386, 798, 1502, 1573, 1591
Asp700I GAANNNNTTC 1 cut(s) 150
AspLEI GCGC 1 cut(s) 43
AspS9I GGNCC 3 cut(s) 112, 540, 921
AsuC2I CCSGG 2 cut(s) 375, 1128
AsuHPI GGTGA 2 cut(s) 16, 1676
AvaI CYCGRG 2 cut(s) 95, 986
AvaII GGWCC 2 cut(s) 112, 921
BanII GRGCYC 1 cut(s) 184
BbsI GAAGAC 1 cut(s) 51
BbvI GCAGC 7 cut(s) 14, 359, 373, 810, 1514, 1560, 1603
BccI CCATC 9 cut(s) 656, 686, 690, 851, 1189, 1273, 1372, 1547, 1661
BceAI ACGGC 3 cut(s) 748, 1490, 1547
BcgI CGANNNNNNTGC 2 cut(s) 449, 483
BciT130I CCWGG 2 cut(s) 159, 1025
BclI TGATCA 4 cut(s) 808, 819, 835, 1411
BcnI CCSGG 2 cut(s) 375, 1128
BcoDI GTCTC 2 cut(s) 78, 1708
BfaI CTAG 2 cut(s) 885, 1323
BfmI CTRYAG 1 cut(s) 1640
BfoI RGCGCY 1 cut(s) 44
BfrI CTTAAG 1 cut(s) 722
Bme1390I CCNGG 4 cut(s) 159, 375, 1025, 1128
Bme18I GGWCC 2 cut(s) 112, 921
BmeT110I CYCGRG 2 cut(s) 95, 986
BmgT120I GGNCC 3 cut(s) 112, 540, 921
BmiI GGNNCC 2 cut(s) 922, 1383
BmrFI CCNGG 4 cut(s) 159, 375, 1025, 1128
BmrI ACTGGG 1 cut(s) 1371
BmsI GCATC 6 cut(s) 373, 490, 923, 1102, 1240, 1613
BmuI ACTGGG 1 cut(s) 1371
BpiI GAAGAC 1 cut(s) 51
BpmI CTGGAG 3 cut(s) 417, 1362, 1368
BpuEI CTTGAG 5 cut(s) 110, 494, 942, 965, 1175
BpuMI CCSGG 2 cut(s) 375, 1128
BsaJI CCNNGG 5 cut(s) 157, 672, 764, 1023, 1212
BsaXI ACNNNNNCTCC 2 cut(s) 355, 385
Bsc4I CCNNNNNNNGG 5 cut(s) 127, 319, 440, 857, 1717
Bse1I ACTGG 2 cut(s) 1366, 1468
BseBI CCWGG 2 cut(s) 159, 1025
BseDI CCNNGG 5 cut(s) 157, 672, 764, 1023, 1212
BseLI CCNNNNNNNGG 5 cut(s) 127, 319, 440, 857, 1717
BseMII CTCAG 5 cut(s) 83, 542, 604, 1635, 1703
BseNI ACTGG 2 cut(s) 1366, 1468
BseRI GAGGAG 1 cut(s) 1545
BseX3I CGGCCG 1 cut(s) 1532
BseXI GCAGC 7 cut(s) 14, 359, 373, 810, 1514, 1560, 1603
BsgI GTGCAG 1 cut(s) 366
Bsh1285I CGRYCG 2 cut(s) 303, 1535
BshFI GGCC 4 cut(s) 541, 763, 769, 1534
BsiEI CGRYCG 2 cut(s) 303, 1535
BsiHKCI CYCGRG 2 cut(s) 95, 986
BsiSI CCGG 3 cut(s) 65, 374, 1128
BslFI GGGAC 2 cut(s) 874, 1378
BslI CCNNNNNNNGG 5 cut(s) 127, 319, 440, 857, 1717
BsmAI GTCTC 2 cut(s) 78, 1708
BsmBI CGTCTC 1 cut(s) 1708
BsmFI GGGAC 2 cut(s) 874, 1378
BsmI GAATGC 1 cut(s) 1555
BsnI GGCC 4 cut(s) 541, 763, 769, 1534
BsoBI CYCGRG 2 cut(s) 95, 986
Bsp1286I GDGCHC 1 cut(s) 184
Bsp1407I TGTACA 3 cut(s) 316, 514, 1066
BspACI CCGC 9 cut(s) 30, 118, 121, 285, 310, 614, 770, 1266, 1421
BspANI GGCC 4 cut(s) 541, 763, 769, 1534
BspCNI CTCAG 5 cut(s) 82, 541, 603, 1634, 1704
BspHI TCATGA 2 cut(s) 277, 496
BspLI GGNNCC 2 cut(s) 922, 1383
BspMAI CTGCAG 1 cut(s) 1644
BspPI GGATC 4 cut(s) 275, 362, 875, 1592
BspTI CTTAAG 1 cut(s) 722
BsrBI CCGCTC 1 cut(s) 287
BsrGI TGTACA 3 cut(s) 316, 514, 1066
BsrI ACTGG 2 cut(s) 1366, 1468
BssECI CCNNGG 5 cut(s) 157, 672, 764, 1023, 1212
BssNAI GTATAC 1 cut(s) 422
BssT1I CCWWGG 2 cut(s) 672, 1212
Bst1107I GTATAC 1 cut(s) 422
Bst2UI CCWGG 2 cut(s) 159, 1025
Bst4CI ACNGT 1 cut(s) 891
Bst6I CTCTTC 1 cut(s) 1650
BstAFI CTTAAG 1 cut(s) 722
BstAUI TGTACA 3 cut(s) 316, 514, 1066
BstC8I GCNNGC 5 cut(s) 80, 612, 803, 1566, 1589
BstDEI CTNAG 5 cut(s) 69, 528, 590, 1621, 1712
BstDSI CCRYGG 1 cut(s) 764
BstENI CCTNNNNNAGG 1 cut(s) 317
BstH2I RGCGCY 1 cut(s) 44
BstHHI GCGC 1 cut(s) 43
BstMAI GTCTC 2 cut(s) 78, 1708
BstMCI CGRYCG 2 cut(s) 303, 1535
BstMWI GCNNNNNNNGC 7 cut(s) 27, 476, 509, 518, 547, 769, 1570
BstNI CCWGG 2 cut(s) 159, 1025
BstNSI RCATGY 3 cut(s) 512, 521, 647
BstSCI CCNGG 4 cut(s) 157, 373, 1023, 1126
BstSFI CTRYAG 1 cut(s) 1640
BstV1I GCAGC 7 cut(s) 14, 359, 373, 810, 1514, 1560, 1603
BstV2I GAAGAC 1 cut(s) 51
BstX2I RGATCY 2 cut(s) 367, 1597
BstYI RGATCY 2 cut(s) 367, 1597
BstZ17I GTATAC 1 cut(s) 422
BstZI CGGCCG 1 cut(s) 1532
BsuRI GGCC 4 cut(s) 541, 763, 769, 1534
BtgI CCRYGG 1 cut(s) 764
Cac8I GCNNGC 5 cut(s) 80, 612, 803, 1566, 1589
CaiI CAGNNNCTG 1 cut(s) 1361
CciI TCATGA 2 cut(s) 277, 496
CfoI GCGC 1 cut(s) 43
Cfr13I GGNCC 3 cut(s) 112, 540, 921
Csp6I GTAC 6 cut(s) 317, 515, 945, 954, 1067, 1086
CviAII CATG 7 cut(s) 278, 497, 509, 518, 551, 644, 806
CviQI GTAC 6 cut(s) 317, 515, 945, 954, 1067, 1086
DdeI CTNAG 5 cut(s) 69, 528, 590, 1621, 1712
DraI TTTAAA 1 cut(s) 1260
EaeI YGGCCR 2 cut(s) 767, 1532
EagI CGGCCG 1 cut(s) 1532
Eam1104I CTCTTC 1 cut(s) 1650
EarI CTCTTC 1 cut(s) 1650
EciI GGCGGA 3 cut(s) 107, 299, 1436
EclXI CGGCCG 1 cut(s) 1532
Eco130I CCWWGG 2 cut(s) 672, 1212
Eco24I GRGCYC 1 cut(s) 184
Eco47I GGWCC 2 cut(s) 112, 921
Eco47III AGCGCT 1 cut(s) 42
Eco52I CGGCCG 1 cut(s) 1532
Eco57I CTGAAG 1 cut(s) 510
Eco88I CYCGRG 2 cut(s) 95, 986
EcoNI CCTNNNNNAGG 1 cut(s) 317
EcoO109I RGGNCCY 2 cut(s) 112, 921
EcoRII CCWGG 2 cut(s) 157, 1023
EcoT14I CCWWGG 2 cut(s) 672, 1212
EcoT22I ATGCAT 1 cut(s) 214
EcoT38I GRGCYC 1 cut(s) 184
ErhI CCWWGG 2 cut(s) 672, 1212
Esp3I CGTCTC 1 cut(s) 1708
FaeI CATG 7 cut(s) 281, 500, 512, 521, 554, 647, 809
FalI AAGNNNNNCTT 4 cut(s) 231, 263, 297, 329
FaqI GGGAC 2 cut(s) 874, 1378
FatI CATG 7 cut(s) 277, 496, 508, 517, 550, 643, 805
FauI CCCGC 2 cut(s) 23, 292
FauNDI CATATG 2 cut(s) 1408, 1477
FbaI TGATCA 4 cut(s) 808, 819, 835, 1411
FblI GTMKAC 2 cut(s) 421, 1032
FriOI GRGCYC 1 cut(s) 184
FspBI CTAG 2 cut(s) 885, 1323
GlaI GCGC 1 cut(s) 42
GsuI CTGGAG 3 cut(s) 417, 1362, 1368
HaeII RGCGCY 1 cut(s) 44
HaeIII GGCC 4 cut(s) 541, 763, 769, 1534
HapII CCGG 3 cut(s) 65, 374, 1128
HhaI GCGC 1 cut(s) 43
Hin1II CATG 7 cut(s) 281, 500, 512, 521, 554, 647, 809
Hin6I GCGC 1 cut(s) 41
HinP1I GCGC 1 cut(s) 41
HincII GTYRAC 1 cut(s) 600
HindII GTYRAC 1 cut(s) 600
HindIII AAGCTT 5 cut(s) 719, 1099, 1175, 1469, 1562
HinfI GANTC 2 cut(s) 131, 1636
HpaI GTTAAC 1 cut(s) 600
HpaII CCGG 3 cut(s) 65, 374, 1128
HphI GGTGA 2 cut(s) 16, 1676
Hpy166II GTNNAC 6 cut(s) 103, 422, 534, 600, 1033, 1086
Hpy188I TCNGA 3 cut(s) 490, 1511, 1624
Hpy8I GTNNAC 6 cut(s) 103, 422, 534, 600, 1033, 1086
Hpy99I CGWCG 5 cut(s) 58, 146, 170, 173, 1511
HpyCH4III ACNGT 1 cut(s) 891
HpyF10VI GCNNNNNNNGC 7 cut(s) 27, 476, 509, 518, 547, 769, 1570
HpyF3I CTNAG 5 cut(s) 69, 528, 590, 1621, 1712
Hsp92II CATG 7 cut(s) 281, 500, 512, 521, 554, 647, 809
HspAI GCGC 1 cut(s) 41
Ksp22I TGATCA 4 cut(s) 808, 819, 835, 1411
KspAI GTTAAC 1 cut(s) 600
LmnI GCTCC 2 cut(s) 1387, 1558
Lsp1109I GCAGC 7 cut(s) 14, 359, 373, 810, 1514, 1560, 1603
LweI GCATC 6 cut(s) 373, 490, 923, 1102, 1240, 1613
MaeI CTAG 2 cut(s) 885, 1323
MaeIII GTNAC 6 cut(s) 4, 665, 701, 1111, 1455, 1494
MbiI CCGCTC 1 cut(s) 287
MboII GAAGA 5 cut(s) 22, 51, 251, 503, 1667
MfeI CAATTG 1 cut(s) 1200
MflI RGATCY 2 cut(s) 367, 1597
MhlI GDGCHC 1 cut(s) 184
MluCI AATT 2 cut(s) 1070, 1200
MlyI GAGTC 1 cut(s) 125
MmeI TCCRAC 1 cut(s) 1489
Mph1103I ATGCAT 1 cut(s) 214
MroXI GAANNNNTTC 1 cut(s) 150
MseI TTAA 7 cut(s) 599, 723, 972, 1011, 1173, 1259, 1299
MslI CAYNNNNRTG 1 cut(s) 1059
MspCI CTTAAG 1 cut(s) 722
MspI CCGG 3 cut(s) 65, 374, 1128
MspR9I CCNGG 4 cut(s) 159, 375, 1025, 1128
MunI CAATTG 1 cut(s) 1200
Mva1269I GAATGC 1 cut(s) 1555
MvaI CCWGG 2 cut(s) 159, 1025
MwoI GCNNNNNNNGC 7 cut(s) 27, 476, 509, 518, 547, 769, 1570
NciI CCSGG 2 cut(s) 375, 1128
NdeI CATATG 2 cut(s) 1408, 1477
NlaIII CATG 7 cut(s) 281, 500, 512, 521, 554, 647, 809
NlaIV GGNNCC 2 cut(s) 922, 1383
NmeAIII GCCGAG 1 cut(s) 1594
NmuCI GTSAC 1 cut(s) 4
NsiI ATGCAT 1 cut(s) 214
NspI RCATGY 3 cut(s) 512, 521, 647
PagI TCATGA 2 cut(s) 277, 496
PctI GAATGC 1 cut(s) 1555
PdmI GAANNNNTTC 1 cut(s) 150
PfeI GAWTC 1 cut(s) 1636
PflFI GACNNNGTC 1 cut(s) 1719
PflMI CCANNNNNTGG 1 cut(s) 440
Ple19I CGATCG 1 cut(s) 303
PleI GAGTC 1 cut(s) 125
PpsI GAGTC 1 cut(s) 125
PpuMI RGGWCCY 2 cut(s) 112, 921
PsiI TTATAA 1 cut(s) 749
Psp5II RGGWCCY 2 cut(s) 112, 921
Psp6I CCWGG 2 cut(s) 157, 1023
PspGI CCWGG 2 cut(s) 157, 1023
PspN4I GGNNCC 2 cut(s) 922, 1383
PspPI GGNCC 3 cut(s) 112, 540, 921
PspPPI RGGWCCY 2 cut(s) 112, 921
PsrI GAACNNNNNNTAC 4 cut(s) 498, 517, 530, 549
PstI CTGCAG 1 cut(s) 1644
PstNI CAGNNNCTG 1 cut(s) 1361
PsuI RGATCY 2 cut(s) 367, 1597
PsyI GACNNNGTC 1 cut(s) 1719
PvuI CGATCG 1 cut(s) 303
RsaI GTAC 6 cut(s) 318, 516, 946, 955, 1068, 1087
RsaNI GTAC 6 cut(s) 317, 515, 945, 954, 1067, 1086
RseI CAYNNNNRTG 1 cut(s) 1059
SaqAI TTAA 7 cut(s) 599, 723, 972, 1011, 1173, 1259, 1299
Sau96I GGNCC 3 cut(s) 112, 540, 921
SchI GAGTC 1 cut(s) 125
ScrFI CCNGG 4 cut(s) 159, 375, 1025, 1128
SduI GDGCHC 1 cut(s) 184
SfaNI GCATC 6 cut(s) 373, 490, 923, 1102, 1240, 1613
SfcI CTRYAG 1 cut(s) 1640
SinI GGWCC 2 cut(s) 112, 921
SmiMI CAYNNNNRTG 1 cut(s) 1059
SmlI CTYRAG 6 cut(s) 125, 473, 722, 957, 980, 1190
SmoI CTYRAG 6 cut(s) 125, 473, 722, 957, 980, 1190
Sse9I AATT 2 cut(s) 1070, 1200
SsiI CCGC 9 cut(s) 30, 118, 121, 285, 310, 614, 770, 1266, 1421
SspMI CTAG 2 cut(s) 885, 1323
StyD4I CCNGG 4 cut(s) 157, 373, 1023, 1126
StyI CCWWGG 2 cut(s) 672, 1212
TaaI ACNGT 1 cut(s) 891
TaqI TCGA 5 cut(s) 165, 303, 459, 1051, 1578
TasI AATT 2 cut(s) 1070, 1200
TatI WGTACW 4 cut(s) 316, 514, 953, 1066
TauI GCSGC 3 cut(s) 123, 772, 1268
TfiI GAWTC 1 cut(s) 1636
Tru1I TTAA 7 cut(s) 599, 723, 972, 1011, 1173, 1259, 1299
Tru9I TTAA 7 cut(s) 599, 723, 972, 1011, 1173, 1259, 1299
TseFI GTSAC 1 cut(s) 4
TseI GCWGC 7 cut(s) 27, 347, 386, 798, 1502, 1573, 1591
Tsp45I GTSAC 1 cut(s) 4
TspDTI ATGAA 7 cut(s) 314, 374, 567, 1063, 1299, 1305, 1494
TspGWI ACGGA 1 cut(s) 1696
Tth111I GACNNNGTC 1 cut(s) 1719
Van91I CCANNNNNTGG 1 cut(s) 440
Vha464I CTTAAG 1 cut(s) 722
VpaK11BI GGWCC 2 cut(s) 112, 921
XagI CCTNNNNNAGG 1 cut(s) 317
XceI RCATGY 3 cut(s) 512, 521, 647
XcmI CCANNNNNNNNNTGG 1 cut(s) 1276
XmiI GTMKAC 2 cut(s) 421, 1032
XmnI GAANNNNTTC 1 cut(s) 150
XspI CTAG 2 cut(s) 885, 1323
Zsp2I ATGCAT 1 cut(s) 214
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.