Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb2

Orthogroup ID

OG0000982

Physical Location & Seq

Genomic Coordinates Forward (+)

19630395 .. 19632586

Gene Structure 2192 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_2g24030.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1485 bp

ATGGATCCTGGACCGATATCAAGATCGGTTCTTTTCGGGTTTCTGATACTTGTTTCCCTGATTCTAAATGTTTCCGGCAACTTCGTTTTTCCGGTGAGTCACAAGTTCCAGGGCCGCCGCGGGTGGCCGTCTTTGAGTGAGTTAAAGGCCCACGACGCTCGTCGCCACGGCCGGAACCTCCTCTTTGTTTCGTCTTCAGCTGTGGATCTGGAATTGGGCGGCAACGGCCACCCTTCCGAGACTGGTCTCTATTTCGCTAAGCTCGGAATCGGAACTCCGGCCAAGGACTACTACGTGCAAGTAGACACCGGCAGCGATATCTTGTGGATCAATTGCATTGAGTGTGCCAGTTGCCCCAAGAAAAGCGACATTGGCGTCAAGCTGACGTTGTATGATCCAAAAGGGTCTTCGACTTCTGAATCGATCAGTTGTGATCAGGACTTTTGCACTGCGCAGTATGATGGTCAGTTACCGGGTTGTAAGCCGGATTTGCTTTGTCAATATAATGTGGTGTATGGGGATGGGAGTTCGACTTCAGGGTACTTTGTGAAGGATGTGATTGAGTTTGATAGGGTTAGTGGGAGTCATCAGACTTCGGTGACGAATGGGAGCATTGTGTTCGGGTGTGGAGCTAAGCAGTCGGGGCAGCTTGGGAAGTCGTCTGAGGCGCTTGATGGGATTCTTGGATTTGGACAAGCGAATTCGTCTATGATTTCTCAGCTGGCTGCTGCTGGGAAGGTGAAGAGGCAGTTTGCGCATTGTTTGGACAATGTGAATGGTGGTGGGATTTTCGCCATTGGGGAAGTTGTGGAGCCGAAACTGAAGCTGAACATGACTCCGTTGGTGCCCAAAACCGCGCATTACAATGTGGTCATGGAGGCAATTGAGGTGGGTGGTGATGTTGTAGACCTGCCCTCGGATACATTTGACAGTGGAGACAAGGAAGGGACCATCATAGATAGTGGTACCACTTTGGCTTATCTTCCACAGGTGATTTATGAGCCGGTGATGAAAATGATAATGAGCAAGCAACCCAATTTGAAGTTGCACACTGTGGAGGACCAGTTCACATGTTTTCAGTATTTGGAAGATGTGGATGATGGGTTCCCGGTGGTGAAGTTTCACTTTAAGAACTCGGTTTCGCTATCTGTGTATCCCCATGAGTATTTGTTCCAATTGAAGGAGTATGTGTGGTGTTCTGGGTGGCAGAGCAATGGGATGAAAACCAAAGATGGAGGATCCATAACTCTTTTGGGAGATTTGGTGCTCTCGAATAAGCTGGTGTTTTACGACCTTGAGAATCAGTCCATTGGGTGGATTGATTACAATTGCTCTTCAAGCATCAGAGTGAAAGATGACAATTCAGGGGAAATGTACAGTGTTGAAGCACACAACATTTCTTCTGCTTCAGGTTTGTTAATGGGTAGAAGATTATTGACATTATTGTTATTTGTAAGTTGTATGCTGCTGCAAATATCTATATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004175 GO:0004190 GO:0005575 GO:0005623 GO:0005886 GO:0006508 GO:0006807 GO:0008150 GO:0008152 GO:0008233 GO:0009056 GO:0009057 GO:0016020 GO:0016787 GO:0019538 GO:0030163 GO:0031224 GO:0031225 GO:0031226 GO:0043170 GO:0044238 GO:0044425 GO:0044459 GO:0044464 GO:0046658 GO:0070001 GO:0070011 GO:0071704 GO:0071944 GO:0140096 GO:1901564 GO:1901565 GO:1901575

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

TAXi_C TAXi_N

Protein Analysis

495

Amino Acids

53.77

Weight (kDa)

5.25

Isoelectric Point (pI)

41.81

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TAXi_N	PF14543	84 - 267	3.2e-40	Xylanase inhibitor N-terminal
Asp	PF00026	84 - 438	2.4e-24	Eukaryotic aspartyl protease
TAXi_C	PF14541	287 - 438	7.4e-20	Xylanase inhibitor C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000982)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G02740 AT3G02740
fragaria_vesca	FvH4_2g24030 FvH4_6g00390 FvH4_6g00390 FvH4_6g00390
malus_domestica	MD03G1269400.v1.1 MD03G1269600.v1.1 MD04G1246000.v1.1 MD11G1290400.v1.1 MD12G1264000.v1.1
prunus_persica	Prupe.6G362400_v2.0.a1 Prupe.6G362400_v2.0.a1 Prupe.8G245700_v2.0.a1
pyrus_communis	pycom03g21490 pycom04g21690 pycom11g25770
rosa_chinensis	RchiOBHm_Chr2g0165041 RchiOBHm_Chr3g0447731 RchiOBHm_Chr5g0038071 RchiOBHm_Chr6g0291731
rosa_laevigata	RLG00000012088 RLG00000023499 RLG00000025975 RLG00000027765 RLG00000033833 RLG00000033834
rosa_multiflora	Rmu_sc0002407.1_g000014
rosa_roxburghii	Rroxscaffold_1G00042870 Rroxscaffold_3G00230620 Rroxscaffold_6G00425930 Rroxscaffold_7G00175790
rosa_rugosa	Rorug02G0033100 Rorug02G0605200 Rorug06G0221400 Rorug07G0073200
rosa_samantha	Rh1BG276600 Rh1DG307300 Rh2AG078500 Rh2BG591900 Rh2BG592000 Rh2CG562400 Rh2DG077500 Rh3AG004800 Rh3BG004400 Rh3CG004800 Rh3DG004700 Rh4BG233300 Rh5AG258400 Rh5BG261800 Rh5CG293900 Rh5DG270900 Rh6AG333900 Rh6BG341000 Rh6CG347100 Rh6DG334300
rosa_wichuraiana	Rw2G006790 Rw2G048190 Rw3G000350 Rw5G024160 Rw6G014720 Rw6G029070

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	374
Acc16I	TGCGCA	2 cut(s)	453, 756
Acc36I	ACCTGC	1 cut(s)	918
Acc65I	GGTACC	1 cut(s)	965
AccB1I	GGYRCC	2 cut(s)	844, 965
AccB7I	CCANNNNNTGG	1 cut(s)	1314
AccI	GTMKAC	2 cut(s)	303, 906
AccII	CGCG	2 cut(s)	120, 857
AciI	CCGC	5 cut(s)	115, 118, 120, 219, 855
AclWI	GGATC	6 cut(s)	12, 213, 335, 389, 1233, 1246
AcoI	YGGCCR	4 cut(s)	125, 169, 226, 279
AcsI	RAATTY	1 cut(s)	700
AcuI	CTGAAG	4 cut(s)	180, 519, 842, 1392
AcyI	GRCGYC	1 cut(s)	375
AdeI	CACNNNGTG	1 cut(s)	1054
AfaI	GTAC	3 cut(s)	542, 967, 1376
AfiI	CCNNNNNNNGG	3 cut(s)	916, 1180, 1314
AflIII	ACRYGT	1 cut(s)	1070
AgsI	TTSAA	4 cut(s)	1042, 1180, 1338, 1385
AjnI	CCWGG	2 cut(s)	7, 108
AjuI	GAANNNNNNNTTGG	2 cut(s)	391, 423
AloI	GAACNNNNNNTCC	4 cut(s)	1049, 1081, 1088, 1120
AluBI	AGCT	8 cut(s)	200, 262, 382, 632, 649, 721, 826, 1279
AluI	AGCT	8 cut(s)	200, 262, 382, 632, 649, 721, 826, 1279
Alw21I	GWGCWC	1 cut(s)	1269
Alw26I	GTCTC	3 cut(s)	233, 251, 930
AlwI	GGATC	6 cut(s)	12, 213, 335, 389, 1233, 1246
AoxI	GGCC	6 cut(s)	112, 125, 147, 169, 226, 279
ApeKI	GCWGC	6 cut(s)	312, 646, 725, 728, 1465, 1468
ApoI	RAATTY	1 cut(s)	700
Asp718I	GGTACC	1 cut(s)	965
AspLEI	GCGC	4 cut(s)	454, 670, 757, 859
AspS9I	GGNCC	5 cut(s)	11, 112, 148, 948, 1060
AsuC2I	CCSGG	2 cut(s)	474, 1109
AsuHPI	GGTGA	7 cut(s)	106, 610, 751, 908, 1003, 1018, 1126
AvaII	GGWCC	3 cut(s)	11, 948, 1060
BaeGI	GKGCMC	1 cut(s)	849
BamHI	GGATCC	2 cut(s)	4, 1238
BanI	GGYRCC	2 cut(s)	844, 965
BbsI	GAAGAC	2 cut(s)	186, 399
Bbv12I	GWGCWC	1 cut(s)	1269
BbvI	GCAGC	6 cut(s)	324, 658, 712, 715, 1452, 1455
BccI	CCATC	6 cut(s)	455, 515, 668, 959, 1094, 1226
BceAI	ACGGC	3 cut(s)	112, 184, 241
BcgI	CGANNNNNNTGC	2 cut(s)	601, 635
BciT130I	CCWGG	2 cut(s)	9, 110
BciVI	GTATCC	2 cut(s)	913, 1164
BclI	TGATCA	1 cut(s)	433
BcnI	CCSGG	2 cut(s)	474, 1109
BcoDI	GTCTC	3 cut(s)	233, 251, 930
BfoI	RGCGCY	1 cut(s)	671
BfuAI	ACCTGC	1 cut(s)	918
BfuI	GTATCC	2 cut(s)	913, 1164
BisI	GCNGC	9 cut(s)	115, 118, 220, 313, 647, 726, 729, 1466, 1469
BlpI	GCTNAGC	2 cut(s)	258, 633
BlsI	GCNGC	9 cut(s)	116, 119, 221, 314, 648, 727, 730, 1467, 1470
Bme1390I	CCNGG	4 cut(s)	9, 110, 474, 1109
Bme18I	GGWCC	3 cut(s)	11, 948, 1060
BmgT120I	GGNCC	5 cut(s)	11, 112, 148, 948, 1060
BmiI	GGNNCC	8 cut(s)	6, 176, 813, 846, 949, 967, 1106, 1240
BmrFI	CCNGG	4 cut(s)	9, 110, 474, 1109
BmsI	GCATC	1 cut(s)	1350
BoxI	GACNNNNGTC	1 cut(s)	159
BpiI	GAAGAC	2 cut(s)	186, 399
Bpu1102I	GCTNAGC	2 cut(s)	258, 633
BpuEI	CTTGAG	1 cut(s)	1316
BpuMI	CCSGG	2 cut(s)	474, 1109
Bsa29I	ATCGAT	1 cut(s)	422
BsaAI	YACGTR	1 cut(s)	295
BsaHI	GRCGYC	1 cut(s)	375
BsaI	GGTCTC	1 cut(s)	251
BsaJI	CCNNGG	5 cut(s)	109, 118, 166, 282, 915
BsaWI	WCCGGW	1 cut(s)	91
BsaXI	ACNNNNNCTCC	6 cut(s)	1049, 1079, 1175, 1205, 1248, 1278
Bsc4I	CCNNNNNNNGG	3 cut(s)	916, 1180, 1314
Bse118I	RCCGGY	2 cut(s)	308, 1003
Bse1I	ACTGG	3 cut(s)	247, 348, 1063
Bse3DI	GCAATG	1 cut(s)	1219
BseBI	CCWGG	2 cut(s)	9, 110
BseCI	ATCGAT	1 cut(s)	422
BseDI	CCNNGG	5 cut(s)	109, 118, 166, 282, 915
BseGI	GGATG	4 cut(s)	526, 559, 1102, 1224
BseLI	CCNNNNNNNGG	3 cut(s)	916, 1180, 1314
BseMI	GCAATG	1 cut(s)	1219
BseMII	CTCAG	2 cut(s)	654, 731
BseNI	ACTGG	3 cut(s)	247, 348, 1063
BseRI	GAGGAG	1 cut(s)	170
BseSI	GKGCMC	1 cut(s)	849
BseX3I	CGGCCG	1 cut(s)	169
BseXI	GCAGC	6 cut(s)	324, 658, 712, 715, 1452, 1455
BseYI	CCCAGC	1 cut(s)	731
Bsh1236I	CGCG	2 cut(s)	120, 857
Bsh1285I	CGRYCG	1 cut(s)	172
BshFI	GGCC	6 cut(s)	114, 127, 149, 171, 228, 281
BshNI	GGYRCC	2 cut(s)	844, 965
BshVI	ATCGAT	1 cut(s)	422
BsiEI	CGRYCG	1 cut(s)	172
BsiHKAI	GWGCWC	1 cut(s)	1269
BsiSI	CCGG	9 cut(s)	75, 92, 172, 278, 309, 473, 485, 1004, 1109
BslFI	GGGAC	1 cut(s)	961
BslI	CCNNNNNNNGG	3 cut(s)	916, 1180, 1314
BsmAI	GTCTC	3 cut(s)	233, 251, 930
BsmFI	GGGAC	1 cut(s)	961
BsnI	GGCC	6 cut(s)	114, 127, 149, 171, 228, 281
Bso31I	GGTCTC	1 cut(s)	251
Bsp1286I	GDGCHC	2 cut(s)	849, 1269
Bsp1407I	TGTACA	1 cut(s)	1374
Bsp143I	GATC	8 cut(s)	4, 23, 205, 327, 394, 423, 433, 1238
Bsp1720I	GCTNAGC	2 cut(s)	258, 633
BspACI	CCGC	5 cut(s)	115, 118, 120, 219, 855
BspANI	GGCC	6 cut(s)	114, 127, 149, 171, 228, 281
BspCNI	CTCAG	2 cut(s)	655, 730
BspDI	ATCGAT	1 cut(s)	422
BspFNI	CGCG	2 cut(s)	120, 857
BspLI	GGNNCC	8 cut(s)	6, 176, 813, 846, 949, 967, 1106, 1240
BspMI	ACCTGC	1 cut(s)	918
BspPI	GGATC	6 cut(s)	12, 213, 335, 389, 1233, 1246
BspQI	GCTCTTC	1 cut(s)	1339
BspT107I	GGYRCC	2 cut(s)	844, 965
BspTNI	GGTCTC	1 cut(s)	251
BsrDI	GCAATG	1 cut(s)	1219
BsrFI	RCCGGY	2 cut(s)	308, 1003
BsrGI	TGTACA	1 cut(s)	1374
BsrI	ACTGG	3 cut(s)	247, 348, 1063
BssAI	RCCGGY	2 cut(s)	308, 1003
BssECI	CCNNGG	5 cut(s)	109, 118, 166, 282, 915
BssMI	GATC	8 cut(s)	4, 23, 205, 327, 394, 423, 433, 1238
BssNI	GRCGYC	1 cut(s)	375
BssT1I	CCWWGG	1 cut(s)	282
Bst2UI	CCWGG	2 cut(s)	9, 110
Bst4CI	ACNGT	3 cut(s)	932, 1054, 1379
Bst6I	CTCTTC	2 cut(s)	737, 1339
BstACI	GRCGYC	1 cut(s)	375
BstAUI	TGTACA	1 cut(s)	1374
BstBAI	YACGTR	1 cut(s)	295
BstC8I	GCNNGC	2 cut(s)	723, 1028
BstDEI	CTNAG	4 cut(s)	258, 633, 663, 717
BstDSI	CCRYGG	2 cut(s)	118, 166
BstF5I	GGATG	4 cut(s)	526, 559, 1102, 1224
BstFNI	CGCG	2 cut(s)	120, 857
BstH2I	RGCGCY	1 cut(s)	671
BstHHI	GCGC	4 cut(s)	454, 670, 757, 859
BstKTI	GATC	8 cut(s)	7, 26, 208, 330, 397, 426, 436, 1241
BstMAI	GTCTC	3 cut(s)	233, 251, 930
BstMBI	GATC	8 cut(s)	4, 23, 205, 327, 394, 423, 433, 1238
BstMCI	CGRYCG	1 cut(s)	172
BstMWI	GCNNNNNNNGC	7 cut(s)	155, 225, 372, 490, 643, 754, 1338
BstNI	CCWGG	2 cut(s)	9, 110
BstNSI	RCATGY	1 cut(s)	1074
BstPAI	GACNNNNGTC	1 cut(s)	159
BstSCI	CCNGG	4 cut(s)	7, 108, 472, 1107
BstSLI	GKGCMC	1 cut(s)	849
BstUI	CGCG	2 cut(s)	120, 857
BstV1I	GCAGC	6 cut(s)	324, 658, 712, 715, 1452, 1455
BstV2I	GAAGAC	2 cut(s)	186, 399
BstX2I	RGATCY	3 cut(s)	4, 205, 1238
BstYI	RGATCY	3 cut(s)	4, 205, 1238
BstZI	CGGCCG	1 cut(s)	169
Bsu15I	ATCGAT	1 cut(s)	422
BsuI	GTATCC	2 cut(s)	913, 1164
BsuRI	GGCC	6 cut(s)	114, 127, 149, 171, 228, 281
BsuTUI	ATCGAT	1 cut(s)	422
BtgI	CCRYGG	2 cut(s)	118, 166
BtsCI	GGATG	4 cut(s)	526, 559, 1102, 1224
BtsI	GCAGTG	1 cut(s)	447
BtsIMutI	CAGTG	4 cut(s)	447, 937, 1050, 1384
BveI	ACCTGC	1 cut(s)	918
Cac8I	GCNNGC	2 cut(s)	723, 1028
CfoI	GCGC	4 cut(s)	454, 670, 757, 859
Cfr10I	RCCGGY	2 cut(s)	308, 1003
Cfr13I	GGNCC	5 cut(s)	11, 112, 148, 948, 1060
Cfr42I	CCGCGG	1 cut(s)	121
ClaI	ATCGAT	1 cut(s)	422
CseI	GACGC	2 cut(s)	164, 364
Csp6I	GTAC	3 cut(s)	541, 966, 1375
CspCI	CAANNNNNGTGG	2 cut(s)	870, 905
CviAII	CATG	4 cut(s)	832, 874, 1071, 1160
CviQI	GTAC	3 cut(s)	541, 966, 1375
DdeI	CTNAG	4 cut(s)	258, 633, 663, 717
DpnI	GATC	8 cut(s)	6, 25, 207, 329, 396, 425, 435, 1240
DpnII	GATC	8 cut(s)	4, 23, 205, 327, 394, 423, 433, 1238
DraIII	CACNNNGTG	1 cut(s)	1054
DrdI	GACNNNNNNGTC	1 cut(s)	374
DseDI	GACNNNNNNGTC	1 cut(s)	374
EaeI	YGGCCR	4 cut(s)	125, 169, 226, 279
EagI	CGGCCG	1 cut(s)	169
Eam1104I	CTCTTC	2 cut(s)	737, 1339
EarI	CTCTTC	2 cut(s)	737, 1339
EclXI	CGGCCG	1 cut(s)	169
Eco130I	CCWWGG	1 cut(s)	282
Eco31I	GGTCTC	1 cut(s)	251
Eco32I	GATATC	2 cut(s)	18, 319
Eco47I	GGWCC	3 cut(s)	11, 948, 1060
Eco52I	CGGCCG	1 cut(s)	169
Eco57I	CTGAAG	4 cut(s)	180, 519, 842, 1392
EcoRI	GAATTC	1 cut(s)	700
EcoRII	CCWGG	2 cut(s)	7, 108
EcoRV	GATATC	2 cut(s)	18, 319
EcoT14I	CCWWGG	1 cut(s)	282
ErhI	CCWWGG	1 cut(s)	282
FaeI	CATG	4 cut(s)	835, 877, 1074, 1163
FalI	AAGNNNNNCTT	2 cut(s)	1109, 1141
FaqI	GGGAC	1 cut(s)	961
FatI	CATG	4 cut(s)	831, 873, 1070, 1159
FauI	CCCGC	1 cut(s)	113
FbaI	TGATCA	1 cut(s)	433
FblI	GTMKAC	2 cut(s)	303, 906
Fnu4HI	GCNGC	9 cut(s)	115, 118, 220, 313, 647, 726, 729, 1466, 1469
FokI	GGATG	4 cut(s)	533, 566, 1109, 1231
Fsp4HI	GCNGC	9 cut(s)	115, 118, 220, 313, 647, 726, 729, 1466, 1469
FspI	TGCGCA	2 cut(s)	453, 756
GlaI	GCGC	4 cut(s)	453, 669, 756, 858
GluI	GCNGC	9 cut(s)	115, 118, 220, 313, 647, 726, 729, 1466, 1469
GsaI	CCCAGC	1 cut(s)	735
HaeII	RGCGCY	1 cut(s)	671
HaeIII	GGCC	6 cut(s)	114, 127, 149, 171, 228, 281
HapII	CCGG	9 cut(s)	75, 92, 172, 278, 309, 473, 485, 1004, 1109
HgaI	GACGC	2 cut(s)	164, 364
HhaI	GCGC	4 cut(s)	454, 670, 757, 859
Hin1I	GRCGYC	1 cut(s)	375
Hin1II	CATG	4 cut(s)	835, 877, 1074, 1163
Hin6I	GCGC	4 cut(s)	452, 668, 755, 857
HinP1I	GCGC	4 cut(s)	452, 668, 755, 857
HinfI	GANTC	8 cut(s)	61, 97, 267, 419, 583, 679, 835, 1300
HpaII	CCGG	9 cut(s)	75, 92, 172, 278, 309, 473, 485, 1004, 1109
HphI	GGTGA	7 cut(s)	106, 610, 751, 908, 1003, 1018, 1126
Hpy166II	GTNNAC	3 cut(s)	304, 907, 1068
Hpy188I	TCNGA	9 cut(s)	45, 238, 266, 272, 418, 591, 664, 919, 1346
Hpy188III	TCNNGA	4 cut(s)	21, 209, 437, 1270
Hpy8I	GTNNAC	3 cut(s)	304, 907, 1068
Hpy99I	CGWCG	2 cut(s)	158, 165
HpyAV	CCTTC	5 cut(s)	243, 544, 730, 938, 1174
HpyCH4III	ACNGT	3 cut(s)	932, 1054, 1379
HpyCH4IV	ACGT	2 cut(s)	294, 386
HpyCH4V	TGCA	5 cut(s)	298, 336, 447, 1048, 1471
HpyF10VI	GCNNNNNNNGC	7 cut(s)	155, 225, 372, 490, 643, 754, 1338
HpyF3I	CTNAG	4 cut(s)	258, 633, 663, 717
HpySE526I	ACGT	2 cut(s)	294, 386
Hsp92I	GRCGYC	1 cut(s)	375
Hsp92II	CATG	4 cut(s)	835, 877, 1074, 1163
HspAI	GCGC	4 cut(s)	452, 668, 755, 857
KpnI	GGTACC	1 cut(s)	969
Ksp22I	TGATCA	1 cut(s)	433
KspI	CCGCGG	1 cut(s)	121
Kzo9I	GATC	8 cut(s)	4, 23, 205, 327, 394, 423, 433, 1238
LguI	GCTCTTC	1 cut(s)	1339
LmnI	GCTCC	3 cut(s)	609, 629, 811
Lsp1109I	GCAGC	6 cut(s)	324, 658, 712, 715, 1452, 1455
LweI	GCATC	1 cut(s)	1350
MaeII	ACGT	2 cut(s)	294, 386
MaeIII	GTNAC	3 cut(s)	98, 468, 598
MalI	GATC	8 cut(s)	6, 25, 207, 329, 396, 425, 435, 1240
MboI	GATC	8 cut(s)	4, 23, 205, 327, 394, 423, 433, 1238
MboII	GAAGA	8 cut(s)	186, 399, 754, 974, 1100, 1326, 1392, 1440
MfeI	CAATTG	4 cut(s)	331, 882, 1175, 1327
MflI	RGATCY	3 cut(s)	4, 205, 1238
MhlI	GDGCHC	2 cut(s)	849, 1269
MluCI	AATT	8 cut(s)	212, 331, 700, 882, 1036, 1175, 1327, 1360
MlyI	GAGTC	3 cut(s)	106, 592, 829
MnlI	CCTC	9 cut(s)	188, 191, 658, 738, 871, 880, 925, 1051, 1229
MseI	TTAA	3 cut(s)	143, 1128, 1418
MslI	CAYNNNNRTG	2 cut(s)	864, 1346
MspA1I	CMGCKG	3 cut(s)	120, 200, 721
MspI	CCGG	9 cut(s)	75, 92, 172, 278, 309, 473, 485, 1004, 1109
MspR9I	CCNGG	4 cut(s)	9, 110, 474, 1109
MunI	CAATTG	4 cut(s)	331, 882, 1175, 1327
MvaI	CCWGG	2 cut(s)	9, 110
MvnI	CGCG	2 cut(s)	120, 857
MwoI	GCNNNNNNNGC	7 cut(s)	155, 225, 372, 490, 643, 754, 1338
NciI	CCSGG	2 cut(s)	474, 1109
NdeII	GATC	8 cut(s)	4, 23, 205, 327, 394, 423, 433, 1238
NlaIII	CATG	4 cut(s)	835, 877, 1074, 1163
NlaIV	GGNNCC	8 cut(s)	6, 176, 813, 846, 949, 967, 1106, 1240
NmuCI	GTSAC	2 cut(s)	98, 598
NsbI	TGCGCA	2 cut(s)	453, 756
NspI	RCATGY	1 cut(s)	1074
PciI	ACATGT	1 cut(s)	1070
PciSI	GCTCTTC	1 cut(s)	1339
PfeI	GAWTC	5 cut(s)	61, 267, 419, 679, 1300
PflMI	CCANNNNNTGG	1 cut(s)	1314
PfoI	TCCNGGA	1 cut(s)	7
PkrI	GCNGC	9 cut(s)	116, 119, 221, 314, 648, 727, 730, 1467, 1470
PleI	GAGTC	3 cut(s)	105, 591, 829
PpsI	GAGTC	3 cut(s)	105, 591, 829
Ppu21I	YACGTR	1 cut(s)	295
PscI	ACATGT	1 cut(s)	1070
PshAI	GACNNNNGTC	1 cut(s)	159
Psp6I	CCWGG	2 cut(s)	7, 108
PspFI	CCCAGC	1 cut(s)	731
PspGI	CCWGG	2 cut(s)	7, 108
PspN4I	GGNNCC	8 cut(s)	6, 176, 813, 846, 949, 967, 1106, 1240
PspPI	GGNCC	5 cut(s)	11, 112, 148, 948, 1060
PsuI	RGATCY	3 cut(s)	4, 205, 1238
PvuII	CAGCTG	2 cut(s)	200, 721
RsaI	GTAC	3 cut(s)	542, 967, 1376
RsaNI	GTAC	3 cut(s)	541, 966, 1375
RseI	CAYNNNNRTG	2 cut(s)	864, 1346
SacII	CCGCGG	1 cut(s)	121
SapI	GCTCTTC	1 cut(s)	1339
SaqAI	TTAA	3 cut(s)	143, 1128, 1418
SatI	GCNGC	9 cut(s)	115, 118, 220, 313, 647, 726, 729, 1466, 1469
Sau3AI	GATC	8 cut(s)	4, 23, 205, 327, 394, 423, 433, 1238
Sau96I	GGNCC	5 cut(s)	11, 112, 148, 948, 1060
SchI	GAGTC	3 cut(s)	106, 592, 829
ScrFI	CCNGG	4 cut(s)	9, 110, 474, 1109
SduI	GDGCHC	2 cut(s)	849, 1269
SfaNI	GCATC	1 cut(s)	1350
Sfr303I	CCGCGG	1 cut(s)	121
SgrBI	CCGCGG	1 cut(s)	121
SinI	GGWCC	3 cut(s)	11, 948, 1060
SmiMI	CAYNNNNRTG	2 cut(s)	864, 1346
SmlI	CTYRAG	1 cut(s)	1295
SmoI	CTYRAG	1 cut(s)	1295
Sse9I	AATT	8 cut(s)	212, 331, 700, 882, 1036, 1175, 1327, 1360
SsiI	CCGC	5 cut(s)	115, 118, 120, 219, 855
StyD4I	CCNGG	4 cut(s)	7, 108, 472, 1107
StyI	CCWWGG	1 cut(s)	282
TaaI	ACNGT	3 cut(s)	932, 1054, 1379
TaiI	ACGT	2 cut(s)	297, 389
TaqI	TCGA	4 cut(s)	410, 422, 530, 1271
TaqII	GACCGA	1 cut(s)	28
TasI	AATT	8 cut(s)	212, 331, 700, 882, 1036, 1175, 1327, 1360
TatI	WGTACW	1 cut(s)	1374
TauI	GCSGC	3 cut(s)	117, 120, 222
TfiI	GAWTC	5 cut(s)	61, 267, 419, 679, 1300
Tru1I	TTAA	3 cut(s)	143, 1128, 1418
Tru9I	TTAA	3 cut(s)	143, 1128, 1418
TscAI	CASTG	4 cut(s)	454, 937, 1057, 1384
TseFI	GTSAC	2 cut(s)	98, 598
TseI	GCWGC	6 cut(s)	312, 646, 725, 728, 1465, 1468
Tsp45I	GTSAC	2 cut(s)	98, 598
TspDTI	ATGAA	2 cut(s)	1025, 1235
TspGWI	ACGGA	1 cut(s)	828
TspRI	CASTG	4 cut(s)	454, 937, 1057, 1384
Van91I	CCANNNNNTGG	1 cut(s)	1314
VpaK11BI	GGWCC	3 cut(s)	11, 948, 1060
XapI	RAATTY	1 cut(s)	700
XceI	RCATGY	1 cut(s)	1074
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1249
XmiI	GTMKAC	2 cut(s)	303, 906

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.