Prupe.6G362400_v2.0.a1

Belongs to the peptidase A1 family

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
Physical Location & Seq
Reverse (-)
30503142 .. 30507253
4112 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G362400.2

Sequence Viewer

Length: 1485 bp
ATGGCTCTTGGAACAACAACAACAACAACAAGAGTGGCCGTGTTGGGTGGTGTTCTGCTTTTCTTCGCATTCGTTTTGAATGTGTCTGGTAACTTGGTGTTCTCCGTCAACCATAAGTTCAAGGGTCGTGACAAGCAGGTGTCTTTGAGTGCATTGAAAGAACATGATGCTCGCCGTCACGGTAGGCTTCTAGCCGCAGATGCTGCTGTGGATTTGCAATTGGGTGGCAGTGGTCATCCTTCTGAAGCTGGGCTCTACTTCGCTAAAATCGGGATTGGATCTCCTCCAAAGGACTTTCACGTGCAAGTTGATACAGGAAGTGACCTTTTATGGGTGAATTGTGAAGCATGCGAAAACTGTCCCACTAAAAGTAATCTTGGTTTTAAACTCTCAGTATATGATACAAAGAGCTCTTCAACTTCAAATAAGGTTACTTGTGATCAAGAGTTTTGCACTTCCACATTGAATGGTCGACTTCCTAGTTGCAAGCCAAATATGCTCTGCAATTATAATATCGCCTACGGAGATGGAAGCGCAACTTCTGGATACTATGTGAAGGACAACATACAACTTGATAAAGTAACTGGAAACCATCAAACCACATCAACAAATGGGACTGTAATTTTTGGGTGTGGAGCTAAACAATCTGGGAATCTTGGTAAGTCTCCTGCAGCAGTTGATGGGATACTTGGTTTTGGCCAGGCAAATGCATCCATCATTTCACAACTAGCTTCATCTGGAAAGGTGAAAAGACAATTTTCACATTGCTTGGATAACGTAAAAGGTGGAGGAATCTACGCCATTGGGGAAGTGGTGGAACCAAAAGTGAAAAATACAACTCCCTTGCTGCCAAATATGCCACATTACACTGTTTCAATGAAGACAATTGAGGTGGGCGGTGATGCTATAGAACTTACCACAGATATATTTGGCCTTTTTGGAGACCGGAAGTCGGCAGTAATTGACAGTGGAACAACATTGGCTTATCTTACACCGGAGGTTTTTGAACCTTTTATCAAAAAGATATTTGCTCGGCAGTCTGGATTGAAGTTACATACTGTTGAGGAGCAGTTTACATGTTTTGAGTATACCGAAAAGGTTGATGATGGATTTCCAATTGTAAAGTTCGGTTTTAAGAGTTCTGCTTCTTTGACAGTATATCCTCATGACTATCTGTTCCAACTACGTGACAATGTCTGGTGTTCTGGTTGGCAGAGCAACTCGATGAAATCTAAAGATGGAAAGTCGTTGACTCTTCTGGGAGACTTGGTACTTTCAAATAAGCTGGTCCTATATGATCTTGAAAACCAGGCCATTGGGTGGACTGATTACAACTGCACTTCAAGCATTAAACTGAAGGATGACAAATCAGGGCAGGTATACTCTGTTGGTGCCCACAATCTTTATTCAGCATCCAGCCGCATAATGGGAACACTATTGACATTCCTGTTATTAGTAATTGCCATGCTGCAAATATTGCATTAA

Protein Analysis

495

Amino Acids

53.4

Weight (kDa)

7.89

Isoelectric Point (pI)

31.06

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 510
AarI CACCTGC 1 cut(s) 127
Acc36I ACCTGC 2 cut(s) 127, 1366
AccB1I GGYRCC 1 cut(s) 1391
AccB7I CCANNNNNTGG 1 cut(s) 1320
AccI GTMKAC 3 cut(s) 472, 1088, 1380
AciI CCGC 3 cut(s) 195, 897, 1420
AclWI GGATC 1 cut(s) 286
AcoI YGGCCR 2 cut(s) 36, 697
AcuI CTGAAG 2 cut(s) 264, 1376
AcvI CACGTG 1 cut(s) 301
AfaI GTAC 1 cut(s) 1272
AfiI CCNNNNNNNGG 4 cut(s) 331, 952, 1320, 1426
AflIII ACRYGT 1 cut(s) 1076
AhdI GACNNNNNGTC 1 cut(s) 949
AjnI CCWGG 2 cut(s) 699, 1308
AluBI AGCT 5 cut(s) 248, 411, 638, 731, 1285
AluI AGCT 5 cut(s) 248, 411, 638, 731, 1285
Alw21I GWGCWC 1 cut(s) 413
Alw26I GTCTC 3 cut(s) 669, 936, 1257
AlwI GGATC 1 cut(s) 286
AlwNI CAGNNNCTG 1 cut(s) 203
AoxI GGCC 4 cut(s) 36, 697, 931, 1311
ApeKI GCWGC 4 cut(s) 203, 671, 847, 1468
AspLEI GCGC 1 cut(s) 536
AspS9I GGNCC 1 cut(s) 1288
AsuHPI GGTGA 3 cut(s) 346, 757, 911
AvaII GGWCC 1 cut(s) 1288
BaeGI GKGCMC 1 cut(s) 1396
BalI TGGCCA 1 cut(s) 699
BanI GGYRCC 1 cut(s) 1391
BanII GRGCYC 2 cut(s) 255, 413
BbrPI CACGTG 1 cut(s) 301
BbsI GAAGAC 1 cut(s) 887
Bbv12I GWGCWC 1 cut(s) 413
BbvI GCAGC 4 cut(s) 190, 683, 834, 1455
BccI CCATC 6 cut(s) 521, 600, 674, 722, 1100, 1232
BceAI ACGGC 2 cut(s) 23, 159
BciT130I CCWGG 2 cut(s) 701, 1310
BciVI GTATCC 2 cut(s) 539, 678
BclI TGATCA 1 cut(s) 439
BcoDI GTCTC 3 cut(s) 669, 936, 1257
BfaI CTAG 3 cut(s) 191, 480, 728
BfmI CTRYAG 2 cut(s) 669, 906
BfuAI ACCTGC 2 cut(s) 127, 1366
BfuI GTATCC 2 cut(s) 539, 678
BisI GCNGC 6 cut(s) 195, 204, 672, 848, 1420, 1469
BlsI GCNGC 6 cut(s) 196, 205, 673, 849, 1421, 1470
Bme1390I CCNGG 2 cut(s) 701, 1310
Bme18I GGWCC 1 cut(s) 1288
BmeRI GACNNNNNGTC 1 cut(s) 949
BmgT120I GGNCC 1 cut(s) 1288
BmiI GGNNCC 2 cut(s) 819, 1393
BmrFI CCNGG 2 cut(s) 701, 1310
BmsI GCATC 5 cut(s) 157, 190, 719, 892, 1421
BpiI GAAGAC 1 cut(s) 887
BsaAI YACGTR 2 cut(s) 301, 1187
BsaI GGTCTC 1 cut(s) 936
BsaWI WCCGGW 2 cut(s) 945, 994
BsaXI ACNNNNNCTCC 2 cut(s) 1254, 1284
Bsc4I CCNNNNNNNGG 4 cut(s) 331, 952, 1320, 1426
Bse1I ACTGG 1 cut(s) 589
Bse3DI GCAATG 1 cut(s) 763
BseBI CCWGG 2 cut(s) 701, 1310
BseGI GGATG 4 cut(s) 235, 710, 1366, 1412
BseLI CCNNNNNNNGG 4 cut(s) 331, 952, 1320, 1426
BseMI GCAATG 1 cut(s) 763
BseMII CTCAG 1 cut(s) 405
BseNI ACTGG 1 cut(s) 589
BseRI GAGGAG 2 cut(s) 273, 1079
BseSI GKGCMC 1 cut(s) 1396
BseXI GCAGC 4 cut(s) 190, 683, 834, 1455
BseYI CCCAGC 1 cut(s) 248
BsgI GTGCAG 1 cut(s) 1321
BshFI GGCC 4 cut(s) 38, 699, 933, 1313
BshNI GGYRCC 1 cut(s) 1391
BsiHKAI GWGCWC 1 cut(s) 413
BsiSI CCGG 2 cut(s) 946, 995
BslFI GGGAC 2 cut(s) 345, 628
BslI CCNNNNNNNGG 4 cut(s) 331, 952, 1320, 1426
BsmAI GTCTC 3 cut(s) 669, 936, 1257
BsmFI GGGAC 2 cut(s) 345, 628
BsmI GAATGC 1 cut(s) 68
BsnI GGCC 4 cut(s) 38, 699, 933, 1313
Bso31I GGTCTC 1 cut(s) 936
Bsp1286I GDGCHC 3 cut(s) 255, 413, 1396
Bsp143I GATC 3 cut(s) 278, 439, 1297
BspACI CCGC 3 cut(s) 195, 897, 1420
BspANI GGCC 4 cut(s) 38, 699, 933, 1313
BspCNI CTCAG 1 cut(s) 404
BspHI TCATGA 1 cut(s) 1165
BspLI GGNNCC 2 cut(s) 819, 1393
BspMAI CTGCAG 1 cut(s) 673
BspMI ACCTGC 2 cut(s) 127, 1366
BspPI GGATC 1 cut(s) 286
BspQI GCTCTTC 1 cut(s) 418
BspT107I GGYRCC 1 cut(s) 1391
BspTNI GGTCTC 1 cut(s) 936
BsrDI GCAATG 1 cut(s) 763
BsrI ACTGG 1 cut(s) 589
BssMI GATC 3 cut(s) 278, 439, 1297
BssNAI GTATAC 2 cut(s) 1089, 1381
Bst1107I GTATAC 2 cut(s) 1089, 1381
Bst2UI CCWGG 2 cut(s) 701, 1310
Bst4CI ACNGT 7 cut(s) 182, 359, 619, 871, 968, 1060, 1156
Bst6I CTCTTC 2 cut(s) 418, 1260
BstAPI GCANNNNNTGC 2 cut(s) 203, 1477
BstBAI YACGTR 2 cut(s) 301, 1187
BstC8I GCNNGC 3 cut(s) 172, 349, 488
BstDEI CTNAG 1 cut(s) 391
BstF5I GGATG 4 cut(s) 235, 710, 1366, 1412
BstHHI GCGC 1 cut(s) 536
BstKTI GATC 3 cut(s) 281, 442, 1300
BstMAI GTCTC 3 cut(s) 669, 936, 1257
BstMBI GATC 3 cut(s) 278, 439, 1297
BstMWI GCNNNNNNNGC 6 cut(s) 200, 203, 496, 856, 1344, 1477
BstNI CCWGG 2 cut(s) 701, 1310
BstNSI RCATGY 2 cut(s) 351, 1080
BstSCI CCNGG 2 cut(s) 699, 1308
BstSFI CTRYAG 2 cut(s) 669, 906
BstSLI GKGCMC 1 cut(s) 1396
BstV1I GCAGC 4 cut(s) 190, 683, 834, 1455
BstV2I GAAGAC 1 cut(s) 887
BstX2I RGATCY 1 cut(s) 278
BstXI CCANNNNNNTGG 1 cut(s) 1316
BstYI RGATCY 1 cut(s) 278
BstZ17I GTATAC 2 cut(s) 1089, 1381
BsuI GTATCC 2 cut(s) 539, 678
BsuRI GGCC 4 cut(s) 38, 699, 933, 1313
BtsCI GGATG 4 cut(s) 235, 710, 1366, 1412
BtsI GCAGTG 1 cut(s) 235
BtsIMutI CAGTG 3 cut(s) 235, 867, 973
BveI ACCTGC 2 cut(s) 127, 1366
Cac8I GCNNGC 3 cut(s) 172, 349, 488
CaiI CAGNNNCTG 1 cut(s) 203
CciI TCATGA 1 cut(s) 1165
CfoI GCGC 1 cut(s) 536
Cfr13I GGNCC 1 cut(s) 1288
Csp6I GTAC 1 cut(s) 1271
CspCI CAANNNNNGTGG 4 cut(s) 15, 50, 873, 908
CviAII CATG 5 cut(s) 164, 348, 1077, 1166, 1465
CviQI GTAC 1 cut(s) 1271
DdeI CTNAG 1 cut(s) 391
DpnI GATC 3 cut(s) 280, 441, 1299
DpnII GATC 3 cut(s) 278, 439, 1297
DraI TTTAAA 1 cut(s) 385
DriI GACNNNNNGTC 1 cut(s) 949
EaeI YGGCCR 2 cut(s) 36, 697
Eam1104I CTCTTC 2 cut(s) 418, 1260
Eam1105I GACNNNNNGTC 1 cut(s) 949
EarI CTCTTC 2 cut(s) 418, 1260
Ecl136II GAGCTC 1 cut(s) 411
Eco24I GRGCYC 2 cut(s) 255, 413
Eco31I GGTCTC 1 cut(s) 936
Eco47I GGWCC 1 cut(s) 1288
Eco53kI GAGCTC 1 cut(s) 411
Eco57I CTGAAG 2 cut(s) 264, 1376
Eco72I CACGTG 1 cut(s) 301
EcoICRI GAGCTC 1 cut(s) 411
EcoRII CCWGG 2 cut(s) 699, 1308
EcoT22I ATGCAT 1 cut(s) 712
EcoT38I GRGCYC 2 cut(s) 255, 413
FaeI CATG 5 cut(s) 167, 351, 1080, 1169, 1468
FalI AAGNNNNNCTT 2 cut(s) 523, 555
FaqI GGGAC 2 cut(s) 345, 628
FatI CATG 5 cut(s) 163, 347, 1076, 1165, 1464
FbaI TGATCA 1 cut(s) 439
FblI GTMKAC 3 cut(s) 472, 1088, 1380
Fnu4HI GCNGC 6 cut(s) 195, 204, 672, 848, 1420, 1469
FokI GGATG 4 cut(s) 222, 697, 1373, 1399
FriOI GRGCYC 2 cut(s) 255, 413
Fsp4HI GCNGC 6 cut(s) 195, 204, 672, 848, 1420, 1469
FspBI CTAG 3 cut(s) 191, 480, 728
GlaI GCGC 1 cut(s) 535
GluI GCNGC 6 cut(s) 195, 204, 672, 848, 1420, 1469
GsaI CCCAGC 1 cut(s) 252
HaeIII GGCC 4 cut(s) 38, 699, 933, 1313
HapII CCGG 2 cut(s) 946, 995
HhaI GCGC 1 cut(s) 536
Hin1II CATG 5 cut(s) 167, 351, 1080, 1169, 1468
Hin6I GCGC 1 cut(s) 534
HinP1I GCGC 1 cut(s) 534
HincII GTYRAC 3 cut(s) 109, 473, 1251
HindII GTYRAC 3 cut(s) 109, 473, 1251
HinfI GANTC 3 cut(s) 652, 792, 1252
HpaII CCGG 2 cut(s) 946, 995
HphI GGTGA 3 cut(s) 346, 757, 911
Hpy166II GTNNAC 7 cut(s) 109, 473, 1074, 1089, 1251, 1323, 1381
Hpy188I TCNGA 1 cut(s) 244
Hpy188III TCNNGA 8 cut(s) 128, 271, 443, 543, 738, 1041, 1166, 1301
Hpy8I GTNNAC 7 cut(s) 109, 473, 1074, 1089, 1251, 1323, 1381
HpyAV CCTTC 3 cut(s) 249, 550, 1351
HpyCH4III ACNGT 7 cut(s) 182, 359, 619, 871, 968, 1060, 1156
HpyCH4IV ACGT 3 cut(s) 300, 777, 1186
HpyF10VI GCNNNNNNNGC 6 cut(s) 200, 203, 496, 856, 1344, 1477
HpyF3I CTNAG 1 cut(s) 391
HpySE526I ACGT 3 cut(s) 300, 777, 1186
Hsp92II CATG 5 cut(s) 167, 351, 1080, 1169, 1468
HspAI GCGC 1 cut(s) 534
Ksp22I TGATCA 1 cut(s) 439
Kzo9I GATC 3 cut(s) 278, 439, 1297
LguI GCTCTTC 1 cut(s) 418
LmnI GCTCC 2 cut(s) 635, 1066
Lsp1109I GCAGC 4 cut(s) 190, 683, 834, 1455
LweI GCATC 5 cut(s) 157, 190, 719, 892, 1421
MaeI CTAG 3 cut(s) 191, 480, 728
MaeII ACGT 3 cut(s) 300, 777, 1186
MaeIII GTNAC 8 cut(s) 89, 128, 176, 320, 430, 580, 1050, 1187
MalI GATC 3 cut(s) 280, 441, 1299
MboI GATC 3 cut(s) 278, 439, 1297
MboII GAAGA 4 cut(s) 55, 405, 892, 1247
MfeI CAATTG 3 cut(s) 218, 885, 1116
MflI RGATCY 1 cut(s) 278
MhlI GDGCHC 3 cut(s) 255, 413, 1396
MlsI TGGCCA 1 cut(s) 699
MluCI AATT 9 cut(s) 218, 337, 505, 621, 755, 885, 960, 1116, 1458
MluNI TGGCCA 1 cut(s) 699
MlyI GAGTC 1 cut(s) 1246
MmeI TCCRAC 1 cut(s) 1204
MnlI CCTC 6 cut(s) 294, 782, 883, 991, 1057, 1173
Mox20I TGGCCA 1 cut(s) 699
Mph1103I ATGCAT 1 cut(s) 712
MscI TGGCCA 1 cut(s) 699
MseI TTAA 4 cut(s) 384, 1134, 1350, 1483
Msp20I TGGCCA 1 cut(s) 699
MspI CCGG 2 cut(s) 946, 995
MspR9I CCNGG 2 cut(s) 701, 1310
MunI CAATTG 3 cut(s) 218, 885, 1116
Mva1269I GAATGC 1 cut(s) 68
MvaI CCWGG 2 cut(s) 701, 1310
MwoI GCNNNNNNNGC 6 cut(s) 200, 203, 496, 856, 1344, 1477
NdeII GATC 3 cut(s) 278, 439, 1297
NlaIII CATG 5 cut(s) 167, 351, 1080, 1169, 1468
NlaIV GGNNCC 2 cut(s) 819, 1393
NmeAIII GCCGAG 1 cut(s) 1012
NmuCI GTSAC 4 cut(s) 128, 176, 320, 1187
NsiI ATGCAT 1 cut(s) 712
NspI RCATGY 2 cut(s) 351, 1080
PaeI GCATGC 1 cut(s) 351
PagI TCATGA 1 cut(s) 1165
PaqCI CACCTGC 1 cut(s) 127
PciI ACATGT 1 cut(s) 1076
PciSI GCTCTTC 1 cut(s) 418
PctI GAATGC 1 cut(s) 68
PfeI GAWTC 2 cut(s) 652, 792
PflFI GACNNNGTC 1 cut(s) 1193
PflMI CCANNNNNTGG 1 cut(s) 1320
PkrI GCNGC 6 cut(s) 196, 205, 673, 849, 1421, 1470
PleI GAGTC 1 cut(s) 1246
PmaCI CACGTG 1 cut(s) 301
PmlI CACGTG 1 cut(s) 301
PpsI GAGTC 1 cut(s) 1246
Ppu21I YACGTR 2 cut(s) 301, 1187
PscI ACATGT 1 cut(s) 1076
PsiI TTATAA 1 cut(s) 510
Psp124BI GAGCTC 1 cut(s) 413
Psp6I CCWGG 2 cut(s) 699, 1308
PspCI CACGTG 1 cut(s) 301
PspFI CCCAGC 1 cut(s) 248
PspGI CCWGG 2 cut(s) 699, 1308
PspN4I GGNNCC 2 cut(s) 819, 1393
PspPI GGNCC 1 cut(s) 1288
PstI CTGCAG 1 cut(s) 673
PstNI CAGNNNCTG 1 cut(s) 203
PsuI RGATCY 1 cut(s) 278
PsyI GACNNNGTC 1 cut(s) 1193
RsaI GTAC 1 cut(s) 1272
RsaNI GTAC 1 cut(s) 1271
SacI GAGCTC 1 cut(s) 413
SalI GTCGAC 1 cut(s) 471
SapI GCTCTTC 1 cut(s) 418
SaqAI TTAA 4 cut(s) 384, 1134, 1350, 1483
SatI GCNGC 6 cut(s) 195, 204, 672, 848, 1420, 1469
Sau3AI GATC 3 cut(s) 278, 439, 1297
Sau96I GGNCC 1 cut(s) 1288
SchI GAGTC 1 cut(s) 1246
ScrFI CCNGG 2 cut(s) 701, 1310
SduI GDGCHC 3 cut(s) 255, 413, 1396
SfaNI GCATC 5 cut(s) 157, 190, 719, 892, 1421
SfcI CTRYAG 2 cut(s) 669, 906
SinI GGWCC 1 cut(s) 1288
SphI GCATGC 1 cut(s) 351
Sse9I AATT 9 cut(s) 218, 337, 505, 621, 755, 885, 960, 1116, 1458
SsiI CCGC 3 cut(s) 195, 897, 1420
SspI AATATT 1 cut(s) 1476
SspMI CTAG 3 cut(s) 191, 480, 728
SstI GAGCTC 1 cut(s) 413
StyD4I CCNGG 2 cut(s) 699, 1308
TaaI ACNGT 7 cut(s) 182, 359, 619, 871, 968, 1060, 1156
TaiI ACGT 3 cut(s) 303, 780, 1189
TaqI TCGA 2 cut(s) 472, 1223
TasI AATT 9 cut(s) 218, 337, 505, 621, 755, 885, 960, 1116, 1458
TauI GCSGC 2 cut(s) 197, 1422
TfiI GAWTC 2 cut(s) 652, 792
Tru1I TTAA 4 cut(s) 384, 1134, 1350, 1483
Tru9I TTAA 4 cut(s) 384, 1134, 1350, 1483
TscAI CASTG 3 cut(s) 235, 874, 973
TseFI GTSAC 4 cut(s) 128, 176, 320, 1187
TseI GCWGC 4 cut(s) 203, 671, 847, 1468
Tsp45I GTSAC 4 cut(s) 128, 176, 320, 1187
TspDTI ATGAA 3 cut(s) 723, 893, 1241
TspGWI ACGGA 2 cut(s) 94, 537
TspRI CASTG 3 cut(s) 235, 874, 973
Tth111I GACNNNGTC 1 cut(s) 1193
Van91I CCANNNNNTGG 1 cut(s) 1320
VpaK11BI GGWCC 1 cut(s) 1288
XceI RCATGY 2 cut(s) 351, 1080
XcmI CCANNNNNNNNNTGG 2 cut(s) 808, 1423
XmiI GTMKAC 3 cut(s) 472, 1088, 1380
XspI CTAG 3 cut(s) 191, 480, 728
Zsp2I ATGCAT 1 cut(s) 712
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.