Belongs to the peptidase A1 family
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 2 cut(s) | 1307, 1314 |
| AccI | GTMKAC | 1 cut(s) | 1395 |
| AccII | CGCG | 1 cut(s) | 1568 |
| AccIII | TCCGGA | 1 cut(s) | 539 |
| AclWI | GGATC | 1 cut(s) | 619 |
| AcoI | YGGCCR | 1 cut(s) | 646 |
| AcsI | RAATTY | 3 cut(s) | 752, 1163, 1255 |
| AcuI | CTGAAG | 1 cut(s) | 1497 |
| AfaI | GTAC | 3 cut(s) | 833, 994, 1496 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 322, 923, 1360, 1423 |
| AgsI | TTSAA | 8 cut(s) | 420, 515, 593, 1104, 1162, 1252, 1406, 1446 |
| AhlI | ACTAGT | 1 cut(s) | 605 |
| AjnI | CCWGG | 3 cut(s) | 1153, 1310, 1410 |
| AluBI | AGCT | 4 cut(s) | 137, 239, 408, 724 |
| AluI | AGCT | 4 cut(s) | 137, 239, 408, 724 |
| Alw26I | GTCTC | 1 cut(s) | 864 |
| AlwI | GGATC | 1 cut(s) | 619 |
| Ama87I | CYCGRG | 1 cut(s) | 188 |
| Aor13HI | TCCGGA | 1 cut(s) | 539 |
| AoxI | GGCC | 4 cut(s) | 13, 177, 192, 646 |
| ApeKI | GCWGC | 7 cut(s) | 228, 351, 728, 954, 1571, 1574, 1582 |
| ApoI | RAATTY | 3 cut(s) | 752, 1163, 1255 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 413, 445 |
| AspA2I | CCTAGG | 2 cut(s) | 16, 662 |
| AspS9I | GGNCC | 2 cut(s) | 192, 1414 |
| AsuC2I | CCSGG | 2 cut(s) | 104, 679 |
| AsuHPI | GGTGA | 5 cut(s) | 118, 337, 449, 754, 831 |
| AsuII | TTCGAA | 1 cut(s) | 1379 |
| AsuNHI | GCTAGC | 1 cut(s) | 724 |
| AvaI | CYCGRG | 1 cut(s) | 188 |
| AvaII | GGWCC | 1 cut(s) | 1414 |
| AvrII | CCTAGG | 2 cut(s) | 16, 662 |
| BalI | TGGCCA | 1 cut(s) | 648 |
| BanI | GGYRCC | 2 cut(s) | 1307, 1314 |
| BanII | GRGCYC | 1 cut(s) | 246 |
| BbsI | GAAGAC | 1 cut(s) | 1350 |
| BbvI | GCAGC | 7 cut(s) | 240, 338, 740, 966, 1558, 1561, 1569 |
| BccI | CCATC | 3 cut(s) | 466, 657, 1331 |
| BceAI | ACGGC | 2 cut(s) | 156, 1198 |
| BciT130I | CCWGG | 3 cut(s) | 1155, 1312, 1412 |
| BciVI | GTATCC | 2 cut(s) | 536, 1287 |
| BclI | TGATCA | 3 cut(s) | 163, 1132, 1429 |
| BcnI | CCSGG | 2 cut(s) | 104, 679 |
| BcoDI | GTCTC | 1 cut(s) | 864 |
| BcuI | ACTAGT | 1 cut(s) | 605 |
| BfaI | CTAG | 4 cut(s) | 17, 606, 663, 725 |
| BfmI | CTRYAG | 2 cut(s) | 801, 906 |
| BfuI | GTATCC | 2 cut(s) | 536, 1287 |
| BglII | AGATCT | 1 cut(s) | 362 |
| BlnI | CCTAGG | 2 cut(s) | 16, 662 |
| Bme1390I | CCNGG | 5 cut(s) | 104, 679, 1155, 1312, 1412 |
| Bme18I | GGWCC | 1 cut(s) | 1414 |
| BmeT110I | CYCGRG | 1 cut(s) | 188 |
| BmgT120I | GGNCC | 2 cut(s) | 192, 1414 |
| BmiI | GGNNCC | 4 cut(s) | 193, 1152, 1309, 1316 |
| BmrFI | CCNGG | 5 cut(s) | 104, 679, 1155, 1312, 1412 |
| BmsI | GCATC | 2 cut(s) | 892, 1507 |
| BmtI | GCTAGC | 1 cut(s) | 728 |
| BpiI | GAAGAC | 1 cut(s) | 1350 |
| Bpu14I | TTCGAA | 1 cut(s) | 1379 |
| BpuEI | CTTGAG | 1 cut(s) | 356 |
| BpuMI | CCSGG | 2 cut(s) | 104, 679 |
| BsaAI | YACGTR | 1 cut(s) | 292 |
| BsaJI | CCNNGG | 6 cut(s) | 16, 662, 678, 1318, 1417, 1566 |
| BsaWI | WCCGGW | 2 cut(s) | 86, 539 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 798, 828 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 322, 923, 1360, 1423 |
| Bse1I | ACTGG | 1 cut(s) | 1468 |
| BseAI | TCCGGA | 1 cut(s) | 539 |
| BseBI | CCWGG | 3 cut(s) | 1155, 1312, 1412 |
| BseDI | CCNNGG | 6 cut(s) | 16, 662, 678, 1318, 1417, 1566 |
| BseGI | GGATG | 7 cut(s) | 410, 458, 562, 596, 946, 1120, 1332 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 322, 923, 1360, 1423 |
| BseMII | CTCAG | 1 cut(s) | 327 |
| BseNI | ACTGG | 1 cut(s) | 1468 |
| BseXI | GCAGC | 7 cut(s) | 240, 338, 740, 966, 1558, 1561, 1569 |
| BseYI | CCCAGC | 1 cut(s) | 239 |
| Bsh1236I | CGCG | 1 cut(s) | 1568 |
| Bsh1285I | CGRYCG | 1 cut(s) | 400 |
| BshFI | GGCC | 4 cut(s) | 15, 179, 194, 648 |
| BshNI | GGYRCC | 2 cut(s) | 1307, 1314 |
| BsiEI | CGRYCG | 1 cut(s) | 400 |
| BsiHKCI | CYCGRG | 1 cut(s) | 188 |
| BsiSI | CCGG | 4 cut(s) | 87, 104, 540, 678 |
| BslFI | GGGAC | 2 cut(s) | 35, 646 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 322, 923, 1360, 1423 |
| BsmAI | GTCTC | 1 cut(s) | 864 |
| BsmFI | GGGAC | 2 cut(s) | 35, 646 |
| BsmI | GAATGC | 1 cut(s) | 208 |
| BsnI | GGCC | 4 cut(s) | 15, 179, 194, 648 |
| BsoBI | CYCGRG | 1 cut(s) | 188 |
| Bsp119I | TTCGAA | 1 cut(s) | 1379 |
| Bsp1286I | GDGCHC | 1 cut(s) | 246 |
| Bsp13I | TCCGGA | 1 cut(s) | 539 |
| Bsp143I | GATC | 7 cut(s) | 163, 362, 397, 611, 1132, 1429, 1590 |
| Bsp19I | CCATGG | 1 cut(s) | 1318 |
| BspANI | GGCC | 4 cut(s) | 15, 179, 194, 648 |
| BspCNI | CTCAG | 1 cut(s) | 328 |
| BspEI | TCCGGA | 1 cut(s) | 539 |
| BspFNI | CGCG | 1 cut(s) | 1568 |
| BspHI | TCATGA | 1 cut(s) | 1282 |
| BspLI | GGNNCC | 4 cut(s) | 193, 1152, 1309, 1316 |
| BspOI | GCTAGC | 1 cut(s) | 728 |
| BspPI | GGATC | 1 cut(s) | 619 |
| BspT104I | TTCGAA | 1 cut(s) | 1379 |
| BspT107I | GGYRCC | 2 cut(s) | 1307, 1314 |
| BsrI | ACTGG | 1 cut(s) | 1468 |
| BssECI | CCNNGG | 6 cut(s) | 16, 662, 678, 1318, 1417, 1566 |
| BssMI | GATC | 7 cut(s) | 163, 362, 397, 611, 1132, 1429, 1590 |
| BssNAI | GTATAC | 1 cut(s) | 1396 |
| BssT1I | CCWWGG | 4 cut(s) | 16, 662, 1318, 1417 |
| Bst1107I | GTATAC | 1 cut(s) | 1396 |
| Bst2UI | CCWGG | 3 cut(s) | 1155, 1312, 1412 |
| Bst4CI | ACNGT | 2 cut(s) | 989, 1439 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 351 |
| BstBAI | YACGTR | 1 cut(s) | 292 |
| BstBI | TTCGAA | 1 cut(s) | 1379 |
| BstC8I | GCNNGC | 4 cut(s) | 485, 580, 726, 1187 |
| BstDEI | CTNAG | 2 cut(s) | 8, 336 |
| BstDSI | CCRYGG | 2 cut(s) | 1318, 1566 |
| BstF5I | GGATG | 7 cut(s) | 410, 458, 562, 596, 946, 1120, 1332 |
| BstFNI | CGCG | 1 cut(s) | 1568 |
| BstKTI | GATC | 7 cut(s) | 166, 365, 400, 614, 1135, 1432, 1593 |
| BstMAI | GTCTC | 1 cut(s) | 864 |
| BstMBI | GATC | 7 cut(s) | 163, 362, 397, 611, 1132, 1429, 1590 |
| BstMCI | CGRYCG | 1 cut(s) | 400 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 348, 351, 721, 771, 1571, 1574 |
| BstNI | CCWGG | 3 cut(s) | 1155, 1312, 1412 |
| BstNSI | RCATGY | 1 cut(s) | 1189 |
| BstSCI | CCNGG | 5 cut(s) | 102, 677, 1153, 1310, 1410 |
| BstSFI | CTRYAG | 2 cut(s) | 801, 906 |
| BstUI | CGCG | 1 cut(s) | 1568 |
| BstV1I | GCAGC | 7 cut(s) | 240, 338, 740, 966, 1558, 1561, 1569 |
| BstV2I | GAAGAC | 1 cut(s) | 1350 |
| BstX2I | RGATCY | 2 cut(s) | 362, 611 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1418 |
| BstYI | RGATCY | 2 cut(s) | 362, 611 |
| BstZ17I | GTATAC | 1 cut(s) | 1396 |
| BsuI | GTATCC | 2 cut(s) | 536, 1287 |
| BsuRI | GGCC | 4 cut(s) | 15, 179, 194, 648 |
| BtgI | CCRYGG | 2 cut(s) | 1318, 1566 |
| BtgZI | GCGATG | 1 cut(s) | 152 |
| BtsCI | GGATG | 7 cut(s) | 410, 458, 562, 596, 946, 1120, 1332 |
| BtsI | GCAGTG | 1 cut(s) | 760 |
| BtsIMutI | CAGTG | 2 cut(s) | 760, 994 |
| Cac8I | GCNNGC | 4 cut(s) | 485, 580, 726, 1187 |
| CciI | TCATGA | 1 cut(s) | 1282 |
| Cfr13I | GGNCC | 2 cut(s) | 192, 1414 |
| Cfr42I | CCGCGG | 1 cut(s) | 1569 |
| CsiI | ACCWGGT | 1 cut(s) | 1410 |
| Csp6I | GTAC | 3 cut(s) | 832, 993, 1495 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1002, 1037 |
| CviAII | CATG | 6 cut(s) | 161, 712, 1186, 1194, 1283, 1319 |
| CviQI | GTAC | 3 cut(s) | 832, 993, 1495 |
| DdeI | CTNAG | 2 cut(s) | 8, 336 |
| DpnI | GATC | 7 cut(s) | 165, 364, 399, 613, 1134, 1431, 1592 |
| DpnII | GATC | 7 cut(s) | 163, 362, 397, 611, 1132, 1429, 1590 |
| DraI | TTTAAA | 1 cut(s) | 1168 |
| EaeI | YGGCCR | 1 cut(s) | 646 |
| Eco130I | CCWWGG | 4 cut(s) | 16, 662, 1318, 1417 |
| Eco147I | AGGCCT | 1 cut(s) | 15 |
| Eco24I | GRGCYC | 1 cut(s) | 246 |
| Eco47I | GGWCC | 1 cut(s) | 1414 |
| Eco57I | CTGAAG | 1 cut(s) | 1497 |
| Eco88I | CYCGRG | 1 cut(s) | 188 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1414 |
| EcoRI | GAATTC | 1 cut(s) | 1255 |
| EcoRII | CCWGG | 3 cut(s) | 1153, 1310, 1410 |
| EcoT14I | CCWWGG | 4 cut(s) | 16, 662, 1318, 1417 |
| EcoT38I | GRGCYC | 1 cut(s) | 246 |
| ErhI | CCWWGG | 4 cut(s) | 16, 662, 1318, 1417 |
| FaeI | CATG | 6 cut(s) | 164, 715, 1189, 1197, 1286, 1322 |
| FaqI | GGGAC | 2 cut(s) | 35, 646 |
| FatI | CATG | 6 cut(s) | 160, 711, 1185, 1193, 1282, 1318 |
| FauI | CCCGC | 1 cut(s) | 623 |
| FbaI | TGATCA | 3 cut(s) | 163, 1132, 1429 |
| FblI | GTMKAC | 1 cut(s) | 1395 |
| FokI | GGATG | 7 cut(s) | 397, 445, 569, 583, 953, 1107, 1339 |
| FriOI | GRGCYC | 1 cut(s) | 246 |
| FspBI | CTAG | 4 cut(s) | 17, 606, 663, 725 |
| GsaI | CCCAGC | 1 cut(s) | 243 |
| HaeIII | GGCC | 4 cut(s) | 15, 179, 194, 648 |
| HapII | CCGG | 4 cut(s) | 87, 104, 540, 678 |
| Hin1II | CATG | 6 cut(s) | 164, 715, 1189, 1197, 1286, 1322 |
| HinfI | GANTC | 3 cut(s) | 271, 634, 792 |
| HpaII | CCGG | 4 cut(s) | 87, 104, 540, 678 |
| HphI | GGTGA | 5 cut(s) | 118, 337, 449, 754, 831 |
| Hpy166II | GTNNAC | 4 cut(s) | 149, 834, 1245, 1396 |
| Hpy188I | TCNGA | 6 cut(s) | 367, 573, 964, 1137, 1480, 1516 |
| Hpy188III | TCNNGA | 4 cut(s) | 540, 1252, 1283, 1297 |
| Hpy8I | GTNNAC | 4 cut(s) | 149, 834, 1245, 1396 |
| Hpy99I | CGWCG | 1 cut(s) | 818 |
| HpyAV | CCTTC | 3 cut(s) | 285, 610, 1036 |
| HpyCH4III | ACNGT | 2 cut(s) | 989, 1439 |
| HpyCH4IV | ACGT | 1 cut(s) | 291 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 348, 351, 721, 771, 1571, 1574 |
| HpyF3I | CTNAG | 2 cut(s) | 8, 336 |
| HpySE526I | ACGT | 1 cut(s) | 291 |
| Hsp92II | CATG | 6 cut(s) | 164, 715, 1189, 1197, 1286, 1322 |
| Kpn2I | TCCGGA | 1 cut(s) | 539 |
| Ksp22I | TGATCA | 3 cut(s) | 163, 1132, 1429 |
| KspI | CCGCGG | 1 cut(s) | 1569 |
| Kzo9I | GATC | 7 cut(s) | 163, 362, 397, 611, 1132, 1429, 1590 |
| LmnI | GCTCC | 3 cut(s) | 134, 668, 1150 |
| Lsp1109I | GCAGC | 7 cut(s) | 240, 338, 740, 966, 1558, 1561, 1569 |
| LweI | GCATC | 2 cut(s) | 892, 1507 |
| MabI | ACCWGGT | 1 cut(s) | 1410 |
| MaeI | CTAG | 4 cut(s) | 17, 606, 663, 725 |
| MaeII | ACGT | 1 cut(s) | 291 |
| MaeIII | GTNAC | 3 cut(s) | 89, 1096, 1558 |
| MalI | GATC | 7 cut(s) | 165, 364, 399, 613, 1134, 1431, 1592 |
| MboI | GATC | 7 cut(s) | 163, 362, 397, 611, 1132, 1429, 1590 |
| MboII | GAAGA | 5 cut(s) | 533, 1051, 1355, 1434, 1503 |
| MfeI | CAATTG | 1 cut(s) | 478 |
| MflI | RGATCY | 2 cut(s) | 362, 611 |
| MhlI | GDGCHC | 1 cut(s) | 246 |
| MlsI | TGGCCA | 1 cut(s) | 648 |
| MluNI | TGGCCA | 1 cut(s) | 648 |
| MlyI | GAGTC | 1 cut(s) | 628 |
| MmeI | TCCRAC | 1 cut(s) | 1304 |
| MnlI | CCTC | 5 cut(s) | 5, 124, 738, 1290, 1297 |
| Mox20I | TGGCCA | 1 cut(s) | 648 |
| MroI | TCCGGA | 1 cut(s) | 539 |
| MscI | TGGCCA | 1 cut(s) | 648 |
| MseI | TTAA | 5 cut(s) | 78, 120, 153, 1107, 1167 |
| MslI | CAYNNNNRTG | 2 cut(s) | 654, 1454 |
| Msp20I | TGGCCA | 1 cut(s) | 648 |
| MspA1I | CMGCKG | 2 cut(s) | 582, 1568 |
| MspI | CCGG | 4 cut(s) | 87, 104, 540, 678 |
| MspR9I | CCNGG | 5 cut(s) | 104, 679, 1155, 1312, 1412 |
| MunI | CAATTG | 1 cut(s) | 478 |
| Mva1269I | GAATGC | 1 cut(s) | 208 |
| MvaI | CCWGG | 3 cut(s) | 1155, 1312, 1412 |
| MvnI | CGCG | 1 cut(s) | 1568 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 348, 351, 721, 771, 1571, 1574 |
| NciI | CCSGG | 2 cut(s) | 104, 679 |
| NcoI | CCATGG | 1 cut(s) | 1318 |
| NdeII | GATC | 7 cut(s) | 163, 362, 397, 611, 1132, 1429, 1590 |
| NheI | GCTAGC | 1 cut(s) | 724 |
| NlaIII | CATG | 6 cut(s) | 164, 715, 1189, 1197, 1286, 1322 |
| NlaIV | GGNNCC | 4 cut(s) | 193, 1152, 1309, 1316 |
| NspI | RCATGY | 1 cut(s) | 1189 |
| NspV | TTCGAA | 1 cut(s) | 1379 |
| PaeI | GCATGC | 1 cut(s) | 1189 |
| PagI | TCATGA | 1 cut(s) | 1282 |
| PceI | AGGCCT | 1 cut(s) | 15 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 288 |
| PctI | GAATGC | 1 cut(s) | 208 |
| PfeI | GAWTC | 2 cut(s) | 271, 792 |
| Ple19I | CGATCG | 1 cut(s) | 400 |
| PleI | GAGTC | 1 cut(s) | 628 |
| PpsI | GAGTC | 1 cut(s) | 628 |
| Ppu21I | YACGTR | 1 cut(s) | 292 |
| PpuMI | RGGWCCY | 1 cut(s) | 1414 |
| Psp5II | RGGWCCY | 1 cut(s) | 1414 |
| Psp6I | CCWGG | 3 cut(s) | 1153, 1310, 1410 |
| PspFI | CCCAGC | 1 cut(s) | 239 |
| PspGI | CCWGG | 3 cut(s) | 1153, 1310, 1410 |
| PspN4I | GGNNCC | 4 cut(s) | 193, 1152, 1309, 1316 |
| PspPI | GGNCC | 2 cut(s) | 192, 1414 |
| PspPPI | RGGWCCY | 1 cut(s) | 1414 |
| PsuI | RGATCY | 2 cut(s) | 362, 611 |
| PvuI | CGATCG | 1 cut(s) | 400 |
| RsaI | GTAC | 3 cut(s) | 833, 994, 1496 |
| RsaNI | GTAC | 3 cut(s) | 832, 993, 1495 |
| RseI | CAYNNNNRTG | 2 cut(s) | 654, 1454 |
| SacII | CCGCGG | 1 cut(s) | 1569 |
| SaqAI | TTAA | 5 cut(s) | 78, 120, 153, 1107, 1167 |
| Sau3AI | GATC | 7 cut(s) | 163, 362, 397, 611, 1132, 1429, 1590 |
| Sau96I | GGNCC | 2 cut(s) | 192, 1414 |
| SchI | GAGTC | 1 cut(s) | 628 |
| ScrFI | CCNGG | 5 cut(s) | 104, 679, 1155, 1312, 1412 |
| SduI | GDGCHC | 1 cut(s) | 246 |
| SexAI | ACCWGGT | 1 cut(s) | 1410 |
| SfaNI | GCATC | 2 cut(s) | 892, 1507 |
| SfcI | CTRYAG | 2 cut(s) | 801, 906 |
| Sfr303I | CCGCGG | 1 cut(s) | 1569 |
| SfuI | TTCGAA | 1 cut(s) | 1379 |
| SgrBI | CCGCGG | 1 cut(s) | 1569 |
| SinI | GGWCC | 1 cut(s) | 1414 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 654, 1454 |
| SmlI | CTYRAG | 1 cut(s) | 371 |
| SmoI | CTYRAG | 1 cut(s) | 371 |
| SpeI | ACTAGT | 1 cut(s) | 605 |
| SphI | GCATGC | 1 cut(s) | 1189 |
| SseBI | AGGCCT | 1 cut(s) | 15 |
| SspI | AATATT | 3 cut(s) | 287, 621, 871 |
| SspMI | CTAG | 4 cut(s) | 17, 606, 663, 725 |
| StuI | AGGCCT | 1 cut(s) | 15 |
| StyD4I | CCNGG | 5 cut(s) | 102, 677, 1153, 1310, 1410 |
| StyI | CCWWGG | 4 cut(s) | 16, 662, 1318, 1417 |
| TaaI | ACNGT | 2 cut(s) | 989, 1439 |
| TaiI | ACGT | 1 cut(s) | 294 |
| TaqI | TCGA | 5 cut(s) | 400, 816, 1079, 1200, 1379 |
| TatI | WGTACW | 1 cut(s) | 831 |
| TauI | GCSGC | 5 cut(s) | 228, 345, 734, 1568, 1571 |
| TfiI | GAWTC | 2 cut(s) | 271, 792 |
| Tru1I | TTAA | 5 cut(s) | 78, 120, 153, 1107, 1167 |
| Tru9I | TTAA | 5 cut(s) | 78, 120, 153, 1107, 1167 |
| TscAI | CASTG | 2 cut(s) | 767, 994 |
| TseI | GCWGC | 7 cut(s) | 228, 351, 728, 954, 1571, 1574, 1582 |
| TspDTI | ATGAA | 6 cut(s) | 534, 842, 957, 1050, 1254, 1343 |
| TspGWI | ACGGA | 1 cut(s) | 1163 |
| TspRI | CASTG | 2 cut(s) | 767, 994 |
| VpaK11BI | GGWCC | 1 cut(s) | 1414 |
| XapI | RAATTY | 3 cut(s) | 752, 1163, 1255 |
| XceI | RCATGY | 1 cut(s) | 1189 |
| XcmI | CCANNNNNNNNNTGG | 3 cut(s) | 119, 421, 1357 |
| XmaJI | CCTAGG | 2 cut(s) | 16, 662 |
| XmiI | GTMKAC | 1 cut(s) | 1395 |
| XspI | CTAG | 4 cut(s) | 17, 606, 663, 725 |