Belongs to the peptidase A1 family
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 2 cut(s) | 118, 1360 |
| Acc36I | ACCTGC | 2 cut(s) | 118, 1360 |
| AccB1I | GGYRCC | 1 cut(s) | 1385 |
| AccII | CGCG | 1 cut(s) | 257 |
| AciI | CCGC | 4 cut(s) | 5, 198, 627, 836 |
| AcoI | YGGCCR | 1 cut(s) | 226 |
| AcsI | RAATTY | 2 cut(s) | 786, 1132 |
| AcuI | CTGAAG | 2 cut(s) | 258, 1386 |
| AfaI | GTAC | 3 cut(s) | 515, 1266, 1376 |
| AfeI | AGCGCT | 1 cut(s) | 30 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 946, 1180, 1421 |
| AflIII | ACRYGT | 2 cut(s) | 428, 1070 |
| AgsI | TTSAA | 9 cut(s) | 282, 411, 417, 460, 884, 1042, 1129, 1338, 1351 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 1237 |
| AjnI | CCWGG | 2 cut(s) | 118, 661 |
| AluBI | AGCT | 7 cut(s) | 382, 405, 632, 721, 1279, 1307, 1406 |
| AluI | AGCT | 7 cut(s) | 382, 405, 632, 721, 1279, 1307, 1406 |
| Alw21I | GWGCWC | 1 cut(s) | 407 |
| Alw26I | GTCTC | 1 cut(s) | 79 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 351 |
| Ama87I | CYCGRG | 1 cut(s) | 76 |
| Aor51HI | AGCGCT | 1 cut(s) | 30 |
| AoxI | GGCC | 3 cut(s) | 226, 792, 925 |
| ApeKI | GCWGC | 2 cut(s) | 345, 1462 |
| ApoI | RAATTY | 2 cut(s) | 786, 1132 |
| AspLEI | GCGC | 2 cut(s) | 31, 191 |
| AspS9I | GGNCC | 3 cut(s) | 116, 792, 1412 |
| AsuC2I | CCSGG | 1 cut(s) | 244 |
| AsuHPI | GGTGA | 6 cut(s) | 109, 161, 340, 751, 883, 978 |
| AsuII | TTCGAA | 2 cut(s) | 933, 1271 |
| AvaI | CYCGRG | 1 cut(s) | 76 |
| AvaII | GGWCC | 2 cut(s) | 116, 1412 |
| BaeGI | GKGCMC | 1 cut(s) | 1390 |
| BalI | TGGCCA | 1 cut(s) | 228 |
| BanI | GGYRCC | 1 cut(s) | 1385 |
| BanII | GRGCYC | 2 cut(s) | 249, 407 |
| BbsI | GAAGAC | 2 cut(s) | 717, 942 |
| Bbv12I | GWGCWC | 1 cut(s) | 407 |
| BbvI | GCAGC | 2 cut(s) | 357, 1449 |
| BccI | CCATC | 4 cut(s) | 237, 515, 668, 1094 |
| BceAI | ACGGC | 1 cut(s) | 150 |
| BciT130I | CCWGG | 2 cut(s) | 120, 663 |
| BciVI | GTATCC | 1 cut(s) | 672 |
| BclI | TGATCA | 1 cut(s) | 433 |
| BcnI | CCSGG | 1 cut(s) | 244 |
| BcoDI | GTCTC | 1 cut(s) | 79 |
| BfaI | CTAG | 1 cut(s) | 1280 |
| BfmI | CTRYAG | 1 cut(s) | 201 |
| BfoI | RGCGCY | 1 cut(s) | 32 |
| BfuAI | ACCTGC | 2 cut(s) | 118, 1360 |
| BfuI | GTATCC | 1 cut(s) | 672 |
| BisI | GCNGC | 3 cut(s) | 6, 346, 1463 |
| BlsI | GCNGC | 3 cut(s) | 7, 347, 1464 |
| BmcAI | AGTACT | 1 cut(s) | 1266 |
| Bme1390I | CCNGG | 3 cut(s) | 120, 244, 663 |
| Bme18I | GGWCC | 2 cut(s) | 116, 1412 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 1237 |
| BmeT110I | CYCGRG | 1 cut(s) | 76 |
| BmgT120I | GGNCC | 3 cut(s) | 116, 792, 1412 |
| BmiI | GGNNCC | 5 cut(s) | 117, 610, 813, 1387, 1413 |
| BmrFI | CCNGG | 3 cut(s) | 120, 244, 663 |
| BmsI | GCATC | 4 cut(s) | 148, 385, 713, 1350 |
| BpiI | GAAGAC | 2 cut(s) | 717, 942 |
| BpmI | CTGGAG | 1 cut(s) | 684 |
| Bpu14I | TTCGAA | 2 cut(s) | 933, 1271 |
| BpuMI | CCSGG | 1 cut(s) | 244 |
| BsaJI | CCNNGG | 2 cut(s) | 119, 972 |
| BsaWI | WCCGGW | 4 cut(s) | 94, 171, 939, 988 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1248, 1278 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 946, 1180, 1421 |
| Bse118I | RCCGGY | 1 cut(s) | 185 |
| Bse1I | ACTGG | 2 cut(s) | 1109, 1174 |
| Bse3DI | GCAATG | 1 cut(s) | 229 |
| BseBI | CCWGG | 2 cut(s) | 120, 663 |
| BseDI | CCNNGG | 2 cut(s) | 119, 972 |
| BseGI | GGATG | 3 cut(s) | 229, 704, 1189 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 946, 1180, 1421 |
| BseMI | GCAATG | 1 cut(s) | 229 |
| BseNI | ACTGG | 2 cut(s) | 1109, 1174 |
| BseSI | GKGCMC | 1 cut(s) | 1390 |
| BseXI | GCAGC | 2 cut(s) | 357, 1449 |
| BsgI | GTGCAG | 4 cut(s) | 357, 364, 430, 1315 |
| Bsh1236I | CGCG | 1 cut(s) | 257 |
| Bsh1285I | CGRYCG | 1 cut(s) | 1383 |
| BshFI | GGCC | 3 cut(s) | 228, 794, 927 |
| BshNI | GGYRCC | 1 cut(s) | 1385 |
| BsiEI | CGRYCG | 1 cut(s) | 1383 |
| BsiHKAI | GWGCWC | 1 cut(s) | 407 |
| BsiHKCI | CYCGRG | 1 cut(s) | 76 |
| BsiSI | CCGG | 6 cut(s) | 95, 172, 186, 243, 940, 989 |
| BsiWI | CGTACG | 1 cut(s) | 513 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 946, 1180, 1421 |
| BsmAI | GTCTC | 1 cut(s) | 79 |
| BsmI | GAATGC | 1 cut(s) | 1436 |
| BsnI | GGCC | 3 cut(s) | 228, 794, 927 |
| BsoBI | CYCGRG | 1 cut(s) | 76 |
| Bsp119I | TTCGAA | 2 cut(s) | 933, 1271 |
| Bsp1286I | GDGCHC | 3 cut(s) | 249, 407, 1390 |
| Bsp143I | GATC | 1 cut(s) | 433 |
| Bsp68I | TCGCGA | 1 cut(s) | 257 |
| BspACI | CCGC | 4 cut(s) | 5, 198, 627, 836 |
| BspANI | GGCC | 3 cut(s) | 228, 794, 927 |
| BspFNI | CGCG | 1 cut(s) | 257 |
| BspHI | TCATGA | 1 cut(s) | 1159 |
| BspLI | GGNNCC | 5 cut(s) | 117, 610, 813, 1387, 1413 |
| BspMI | ACCTGC | 2 cut(s) | 118, 1360 |
| BspQI | GCTCTTC | 1 cut(s) | 412 |
| BspT104I | TTCGAA | 2 cut(s) | 933, 1271 |
| BspT107I | GGYRCC | 1 cut(s) | 1385 |
| BsrDI | GCAATG | 1 cut(s) | 229 |
| BsrFI | RCCGGY | 1 cut(s) | 185 |
| BsrI | ACTGG | 2 cut(s) | 1109, 1174 |
| BssAI | RCCGGY | 1 cut(s) | 185 |
| BssECI | CCNNGG | 2 cut(s) | 119, 972 |
| BssMI | GATC | 1 cut(s) | 433 |
| BssT1I | CCWWGG | 1 cut(s) | 972 |
| Bst2UI | CCWGG | 2 cut(s) | 120, 663 |
| Bst4CI | ACNGT | 8 cut(s) | 353, 464, 613, 865, 871, 962, 1032, 1054 |
| Bst6I | CTCTTC | 1 cut(s) | 412 |
| BstBI | TTCGAA | 2 cut(s) | 933, 1271 |
| BstC8I | GCNNGC | 2 cut(s) | 163, 187 |
| BstF5I | GGATG | 3 cut(s) | 229, 704, 1189 |
| BstFNI | CGCG | 1 cut(s) | 257 |
| BstH2I | RGCGCY | 1 cut(s) | 32 |
| BstHHI | GCGC | 2 cut(s) | 31, 191 |
| BstKTI | GATC | 1 cut(s) | 436 |
| BstMAI | GTCTC | 1 cut(s) | 79 |
| BstMBI | GATC | 1 cut(s) | 433 |
| BstMCI | CGRYCG | 1 cut(s) | 1383 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 11, 197, 1338 |
| BstNI | CCWGG | 2 cut(s) | 120, 663 |
| BstNSI | RCATGY | 2 cut(s) | 432, 1074 |
| BstSCI | CCNGG | 3 cut(s) | 118, 242, 661 |
| BstSFI | CTRYAG | 1 cut(s) | 201 |
| BstSLI | GKGCMC | 1 cut(s) | 1390 |
| BstUI | CGCG | 1 cut(s) | 257 |
| BstV1I | GCAGC | 2 cut(s) | 357, 1449 |
| BstV2I | GAAGAC | 2 cut(s) | 717, 942 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1310 |
| BsuI | GTATCC | 1 cut(s) | 672 |
| BsuRI | GGCC | 3 cut(s) | 228, 794, 927 |
| BtgZI | GCGATG | 2 cut(s) | 238, 909 |
| BtsCI | GGATG | 3 cut(s) | 229, 704, 1189 |
| BtsI | GCAGTG | 1 cut(s) | 757 |
| BtsIMutI | CAGTG | 2 cut(s) | 757, 967 |
| BtuMI | TCGCGA | 1 cut(s) | 257 |
| BveI | ACCTGC | 2 cut(s) | 118, 1360 |
| Cac8I | GCNNGC | 2 cut(s) | 163, 187 |
| CaiI | CAGNNNCTG | 1 cut(s) | 351 |
| CciI | TCATGA | 1 cut(s) | 1159 |
| CfoI | GCGC | 2 cut(s) | 31, 191 |
| Cfr10I | RCCGGY | 1 cut(s) | 185 |
| Cfr13I | GGNCC | 3 cut(s) | 116, 792, 1412 |
| Csp6I | GTAC | 3 cut(s) | 514, 1265, 1375 |
| CviQI | GTAC | 3 cut(s) | 514, 1265, 1375 |
| DpnI | GATC | 1 cut(s) | 435 |
| DpnII | GATC | 1 cut(s) | 433 |
| DriI | GACNNNNNGTC | 1 cut(s) | 1237 |
| EaeI | YGGCCR | 1 cut(s) | 226 |
| Eam1104I | CTCTTC | 1 cut(s) | 412 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 1237 |
| EarI | CTCTTC | 1 cut(s) | 412 |
| Ecl136II | GAGCTC | 1 cut(s) | 405 |
| Eco130I | CCWWGG | 1 cut(s) | 972 |
| Eco24I | GRGCYC | 2 cut(s) | 249, 407 |
| Eco32I | GATATC | 1 cut(s) | 1294 |
| Eco47I | GGWCC | 2 cut(s) | 116, 1412 |
| Eco47III | AGCGCT | 1 cut(s) | 30 |
| Eco53kI | GAGCTC | 1 cut(s) | 405 |
| Eco57I | CTGAAG | 2 cut(s) | 258, 1386 |
| Eco88I | CYCGRG | 1 cut(s) | 76 |
| EcoICRI | GAGCTC | 1 cut(s) | 405 |
| EcoO109I | RGGNCCY | 1 cut(s) | 116 |
| EcoRI | GAATTC | 1 cut(s) | 1132 |
| EcoRII | CCWGG | 2 cut(s) | 118, 661 |
| EcoRV | GATATC | 1 cut(s) | 1294 |
| EcoT14I | CCWWGG | 1 cut(s) | 972 |
| EcoT22I | ATGCAT | 1 cut(s) | 706 |
| EcoT38I | GRGCYC | 2 cut(s) | 249, 407 |
| ErhI | CCWWGG | 1 cut(s) | 972 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 517, 549 |
| FauNDI | CATATG | 1 cut(s) | 604 |
| FbaI | TGATCA | 1 cut(s) | 433 |
| Fnu4HI | GCNGC | 3 cut(s) | 6, 346, 1463 |
| FokI | GGATG | 3 cut(s) | 216, 691, 1196 |
| FriOI | GRGCYC | 2 cut(s) | 249, 407 |
| Fsp4HI | GCNGC | 3 cut(s) | 6, 346, 1463 |
| FspBI | CTAG | 1 cut(s) | 1280 |
| GlaI | GCGC | 2 cut(s) | 30, 190 |
| GluI | GCNGC | 3 cut(s) | 6, 346, 1463 |
| GsuI | CTGGAG | 1 cut(s) | 684 |
| HaeII | RGCGCY | 1 cut(s) | 32 |
| HaeIII | GGCC | 3 cut(s) | 228, 794, 927 |
| HapII | CCGG | 6 cut(s) | 95, 172, 186, 243, 940, 989 |
| HhaI | GCGC | 2 cut(s) | 31, 191 |
| Hin6I | GCGC | 2 cut(s) | 29, 189 |
| HinP1I | GCGC | 2 cut(s) | 29, 189 |
| HincII | GTYRAC | 2 cut(s) | 1057, 1146 |
| HindII | GTYRAC | 2 cut(s) | 1057, 1146 |
| HinfI | GANTC | 2 cut(s) | 194, 646 |
| HpaII | CCGG | 6 cut(s) | 95, 172, 186, 243, 940, 989 |
| HphI | GGTGA | 6 cut(s) | 109, 161, 340, 751, 883, 978 |
| Hpy166II | GTNNAC | 7 cut(s) | 100, 467, 1057, 1068, 1146, 1317, 1375 |
| Hpy188I | TCNGA | 3 cut(s) | 238, 266, 1416 |
| Hpy188III | TCNNGA | 8 cut(s) | 256, 437, 473, 732, 1035, 1086, 1129, 1160 |
| Hpy8I | GTNNAC | 7 cut(s) | 100, 467, 1057, 1068, 1146, 1317, 1375 |
| HpyAV | CCTTC | 3 cut(s) | 243, 288, 1419 |
| HpyCH4III | ACNGT | 8 cut(s) | 353, 464, 613, 865, 871, 962, 1032, 1054 |
| HpyCH4IV | ACGT | 2 cut(s) | 318, 771 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 11, 197, 1338 |
| HpySE526I | ACGT | 2 cut(s) | 318, 771 |
| HspAI | GCGC | 2 cut(s) | 29, 189 |
| KroI | GCCGGC | 1 cut(s) | 185 |
| KroNI | GCCGGC | 1 cut(s) | 187 |
| Ksp22I | TGATCA | 1 cut(s) | 433 |
| Kzo9I | GATC | 1 cut(s) | 433 |
| LguI | GCTCTTC | 1 cut(s) | 412 |
| LmnI | GCTCC | 2 cut(s) | 629, 665 |
| Lsp1109I | GCAGC | 2 cut(s) | 357, 1449 |
| LweI | GCATC | 4 cut(s) | 148, 385, 713, 1350 |
| MaeI | CTAG | 1 cut(s) | 1280 |
| MaeII | ACGT | 2 cut(s) | 318, 771 |
| MaeIII | GTNAC | 6 cut(s) | 80, 167, 314, 424, 539, 865 |
| MalI | GATC | 1 cut(s) | 435 |
| MboI | GATC | 1 cut(s) | 433 |
| MboII | GAAGA | 5 cut(s) | 399, 717, 947, 1392, 1432 |
| MhlI | GDGCHC | 3 cut(s) | 249, 407, 1390 |
| MlsI | TGGCCA | 1 cut(s) | 228 |
| MluNI | TGGCCA | 1 cut(s) | 228 |
| MlyI | GAGTC | 1 cut(s) | 188 |
| MmeI | TCCRAC | 1 cut(s) | 586 |
| MnlI | CCTC | 4 cut(s) | 168, 463, 607, 1167 |
| Mox20I | TGGCCA | 1 cut(s) | 228 |
| Mph1103I | ATGCAT | 1 cut(s) | 706 |
| MreI | CGCCGGCG | 1 cut(s) | 185 |
| MroNI | GCCGGC | 1 cut(s) | 185 |
| MscI | TGGCCA | 1 cut(s) | 228 |
| MseI | TTAA | 5 cut(s) | 111, 378, 1122, 1178, 1477 |
| Msp20I | TGGCCA | 1 cut(s) | 228 |
| MspA1I | CMGCKG | 2 cut(s) | 721, 838 |
| MspI | CCGG | 6 cut(s) | 95, 172, 186, 243, 940, 989 |
| MspR9I | CCNGG | 3 cut(s) | 120, 244, 663 |
| Mva1269I | GAATGC | 1 cut(s) | 1436 |
| MvaI | CCWGG | 2 cut(s) | 120, 663 |
| MvnI | CGCG | 1 cut(s) | 257 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 11, 197, 1338 |
| NaeI | GCCGGC | 1 cut(s) | 187 |
| NciI | CCSGG | 1 cut(s) | 244 |
| NdeI | CATATG | 1 cut(s) | 604 |
| NdeII | GATC | 1 cut(s) | 433 |
| NgoMIV | GCCGGC | 1 cut(s) | 185 |
| NlaIV | GGNNCC | 5 cut(s) | 117, 610, 813, 1387, 1413 |
| NmuCI | GTSAC | 2 cut(s) | 167, 314 |
| NruI | TCGCGA | 1 cut(s) | 257 |
| NsiI | ATGCAT | 1 cut(s) | 706 |
| NspI | RCATGY | 2 cut(s) | 432, 1074 |
| NspV | TTCGAA | 2 cut(s) | 933, 1271 |
| PagI | TCATGA | 1 cut(s) | 1159 |
| PaqCI | CACCTGC | 2 cut(s) | 118, 1360 |
| PciI | ACATGT | 2 cut(s) | 428, 1070 |
| PciSI | GCTCTTC | 1 cut(s) | 412 |
| PctI | GAATGC | 1 cut(s) | 1436 |
| PdiI | GCCGGC | 1 cut(s) | 187 |
| PfeI | GAWTC | 1 cut(s) | 646 |
| Pfl23II | CGTACG | 1 cut(s) | 513 |
| PfoI | TCCNGGA | 1 cut(s) | 661 |
| PkrI | GCNGC | 3 cut(s) | 7, 347, 1464 |
| PleI | GAGTC | 1 cut(s) | 188 |
| PpsI | GAGTC | 1 cut(s) | 188 |
| PpuMI | RGGWCCY | 1 cut(s) | 116 |
| PscI | ACATGT | 2 cut(s) | 428, 1070 |
| Psp124BI | GAGCTC | 1 cut(s) | 407 |
| Psp5II | RGGWCCY | 1 cut(s) | 116 |
| Psp6I | CCWGG | 2 cut(s) | 118, 661 |
| PspGI | CCWGG | 2 cut(s) | 118, 661 |
| PspLI | CGTACG | 1 cut(s) | 513 |
| PspN4I | GGNNCC | 5 cut(s) | 117, 610, 813, 1387, 1413 |
| PspPI | GGNCC | 3 cut(s) | 116, 792, 1412 |
| PspPPI | RGGWCCY | 1 cut(s) | 116 |
| PstNI | CAGNNNCTG | 1 cut(s) | 351 |
| PvuII | CAGCTG | 1 cut(s) | 721 |
| RruI | TCGCGA | 1 cut(s) | 257 |
| RsaI | GTAC | 3 cut(s) | 515, 1266, 1376 |
| RsaNI | GTAC | 3 cut(s) | 514, 1265, 1375 |
| SacI | GAGCTC | 1 cut(s) | 407 |
| SapI | GCTCTTC | 1 cut(s) | 412 |
| SaqAI | TTAA | 5 cut(s) | 111, 378, 1122, 1178, 1477 |
| SatI | GCNGC | 3 cut(s) | 6, 346, 1463 |
| Sau3AI | GATC | 1 cut(s) | 433 |
| Sau96I | GGNCC | 3 cut(s) | 116, 792, 1412 |
| ScaI | AGTACT | 1 cut(s) | 1266 |
| SchI | GAGTC | 1 cut(s) | 188 |
| ScrFI | CCNGG | 3 cut(s) | 120, 244, 663 |
| SduI | GDGCHC | 3 cut(s) | 249, 407, 1390 |
| SfaNI | GCATC | 4 cut(s) | 148, 385, 713, 1350 |
| SfcI | CTRYAG | 1 cut(s) | 201 |
| SfuI | TTCGAA | 2 cut(s) | 933, 1271 |
| SgrAI | CRCCGGYG | 1 cut(s) | 185 |
| SinI | GGWCC | 2 cut(s) | 116, 1412 |
| SsiI | CCGC | 4 cut(s) | 5, 198, 627, 836 |
| SspI | AATATT | 1 cut(s) | 1470 |
| SspMI | CTAG | 1 cut(s) | 1280 |
| SstI | GAGCTC | 1 cut(s) | 407 |
| StyD4I | CCNGG | 3 cut(s) | 118, 242, 661 |
| StyI | CCWWGG | 1 cut(s) | 972 |
| TaaI | ACNGT | 8 cut(s) | 353, 464, 613, 865, 871, 962, 1032, 1054 |
| TaiI | ACGT | 2 cut(s) | 321, 774 |
| TaqI | TCGA | 4 cut(s) | 933, 1027, 1271, 1296 |
| TaqII | GACCGA | 1 cut(s) | 1369 |
| TatI | WGTACW | 2 cut(s) | 1264, 1374 |
| TauI | GCSGC | 1 cut(s) | 8 |
| TfiI | GAWTC | 1 cut(s) | 646 |
| Tru1I | TTAA | 5 cut(s) | 111, 378, 1122, 1178, 1477 |
| Tru9I | TTAA | 5 cut(s) | 111, 378, 1122, 1178, 1477 |
| TscAI | CASTG | 2 cut(s) | 764, 967 |
| TseFI | GTSAC | 2 cut(s) | 167, 314 |
| TseI | GCWGC | 2 cut(s) | 345, 1462 |
| Tsp45I | GTSAC | 2 cut(s) | 167, 314 |
| TspDTI | ATGAA | 5 cut(s) | 281, 717, 1014, 1025, 1235 |
| TspGWI | ACGGA | 4 cut(s) | 531, 697, 868, 1248 |
| TspRI | CASTG | 2 cut(s) | 764, 967 |
| VpaK11BI | GGWCC | 2 cut(s) | 116, 1412 |
| XapI | RAATTY | 2 cut(s) | 786, 1132 |
| XceI | RCATGY | 2 cut(s) | 432, 1074 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 802, 1249 |
| XspI | CTAG | 1 cut(s) | 1280 |
| ZrmI | AGTACT | 1 cut(s) | 1266 |
| Zsp2I | ATGCAT | 1 cut(s) | 706 |