Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5C

Orthogroup ID

OG0000982

Physical Location & Seq

Genomic Coordinates Reverse (-)

32388257 .. 32390932

Gene Structure 2676 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5CG293900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1509 bp

ATGGAACCAAGAGGCCTAGGGGATAGGTTGGGTGGTTTCGTTGCGGTGGTGGTGGTGCTTGTTTCGGCACTGGTCGTTAATGTTTCCGGGAACTTGGTTTTCCCGGTGAGCCACAAGTTTAATGGTAGAGAGGGAGCGTCTTTGAGTGAACTTAAAGCCCATGATCATCGCCGTCACGCTAGATTTCTCGGGGCCAAACAGAATGCTGTGGATATGCCTTTGGCCGGCAGCGCTGAGCAAACTGGGCTCTACTTCACTGTACTTGGGATTGGGAATCCTTCACACGACTATTACGTGGAACTTGATACCGGAAGTAACCTATTTTGGGTGAGTTGCGCGGAGTGCGGCAAAGGCTGCCCTGACAGATCTGAACTCATTGGTACAAAACTCACACACTACGATCGAAACAGTTCTTCCACTTCGAAGGTGGTGTCTTGTGGTGATAACTTTTGCACTTCTCCATCTGTAAAAGAAATCACCAATTGCAAGCCAGATGAGAAATGCAACTACCAGCTTCAATATGCAGATAAAGATAAAACTTCCGGTTACTTTGTCAAGGATGATGTGCAATTTCTGAAAGCCAGCGGGAACTTTCAAACATCCTCCACTAGTGGATCAGTAATATTCGGGTGCGGGACTCAACAATCTGGCGGGATAAATGACCCTAAAGGAGCAATTTCCGGGTTAATTGGTTTTGACCAGGACAACATAACCATGCTTTCACAGCTAGCAGCCGCAGGAAAGGTGAGGAATAAATTTGCACACTGCTTGGATAAACGAGGTGGTGGAATCTGGGCTATAGGAGAAGTCGTCGAACCCAAAATGATGCACACATCACCTATCGTACCAAATCAGACTCGTTACAATATTGAGGTGGAGAAAATTGAGGTTGGAAGTGATGCCATAGAACTTCCTACTAGTAGTGGTGGTGATTTGGATGAAACATCTGGCAGCAGTCCAGACCAAATTATTGCATTTTTTGACAGTGGTACAACATTGGCTCATTTACCACCAAACTTGTATGAACCAATAGTGAAGAAGATATTGGCTACGGACCCTGGATTGAAATTCCGAAAAAATGATGACGGCAAGTACTCATGTTTCGAGTATTCCAAAAACGTTGATGAAAAGTTTCCTATTGTCAAGTTCAATTTCAAGAATTCCGCTTCATTGTGGGTGTATCCTCATGATTATTTGTTCTGGAATATGAAAGAGAGTGCCTGGTGTCATGGTTGGATGAAATTAACTGGGGAAGACCTCGACATTGTTCTGGGAGATATGACGCTTTCGAATAAGTTAGTCGTATACGATCTTGAAAACCAGGTCCTTGGGTGGGCTGATCACAACTGTTCTTCAAGCATAAAAGTGAAAGATGACGAGTCGGGGTCAGACTACTCTGTTCAGTATCACAATCTTGCTTCAGATGCTTCCACCCCAAGACTACTGATGTCATTCGTGTTATTAGTAACTGCTGCTGCTGCTGCTATTCGGCAAATGATCTCAATATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004175 GO:0004190 GO:0005575 GO:0005623 GO:0005886 GO:0006508 GO:0006807 GO:0008150 GO:0008152 GO:0008233 GO:0009056 GO:0009057 GO:0016020 GO:0016787 GO:0019538 GO:0030163 GO:0031224 GO:0031225 GO:0031226 GO:0043170 GO:0044238 GO:0044425 GO:0044459 GO:0044464 GO:0046658 GO:0070001 GO:0070011 GO:0071704 GO:0071944 GO:0140096 GO:1901564 GO:1901565 GO:1901575

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

TAXi_C TAXi_N

Protein Analysis

502

Amino Acids

54.76

Weight (kDa)

5.57

Isoelectric Point (pI)

35.86

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TAXi_N	PF14543	84 - 268	1.6e-36	Xylanase inhibitor N-terminal
Asp	PF00026	84 - 447	3.4e-19	Eukaryotic aspartyl protease
TAXi_C	PF14541	288 - 446	1.5e-15	Xylanase inhibitor C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000982)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G02740 AT3G02740
fragaria_vesca	FvH4_2g24030 FvH4_6g00390 FvH4_6g00390 FvH4_6g00390
malus_domestica	MD03G1269400.v1.1 MD03G1269600.v1.1 MD04G1246000.v1.1 MD11G1290400.v1.1 MD12G1264000.v1.1
prunus_persica	Prupe.6G362400_v2.0.a1 Prupe.6G362400_v2.0.a1 Prupe.8G245700_v2.0.a1
pyrus_communis	pycom03g21490 pycom04g21690 pycom11g25770
rosa_chinensis	RchiOBHm_Chr2g0165041 RchiOBHm_Chr3g0447731 RchiOBHm_Chr5g0038071 RchiOBHm_Chr6g0291731
rosa_laevigata	RLG00000012088 RLG00000023499 RLG00000025975 RLG00000027765 RLG00000033833 RLG00000033834
rosa_multiflora	Rmu_sc0002407.1_g000014
rosa_roxburghii	Rroxscaffold_1G00042870 Rroxscaffold_3G00230620 Rroxscaffold_6G00425930 Rroxscaffold_7G00175790
rosa_rugosa	Rorug02G0033100 Rorug02G0605200 Rorug06G0221400 Rorug07G0073200
rosa_samantha	Rh1BG276600 Rh1DG307300 Rh2AG078500 Rh2BG591900 Rh2BG592000 Rh2CG562400 Rh2DG077500 Rh3AG004800 Rh3BG004400 Rh3CG004800 Rh3DG004700 Rh4BG233300 Rh5AG258400 Rh5BG261800 Rh5CG293900 Rh5DG270900 Rh6AG333900 Rh6BG341000 Rh6CG347100 Rh6DG334300
rosa_wichuraiana	Rw2G006790 Rw2G048190 Rw3G000350 Rw5G024160 Rw6G014720 Rw6G029070

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccI	GTMKAC	1 cut(s)	1305
AccII	CGCG	1 cut(s)	338
AciI	CCGC	8 cut(s)	44, 338, 345, 585, 633, 651, 735, 1164
AclI	AACGTT	1 cut(s)	1119
AclWI	GGATC	1 cut(s)	622
AcoI	YGGCCR	1 cut(s)	222
AcsI	RAATTY	3 cut(s)	755, 1067, 1159
AcuI	CTGAAG	1 cut(s)	1404
AfaI	GTAC	5 cut(s)	261, 382, 846, 991, 1094
AfeI	AGCGCT	1 cut(s)	232
AfiI	CCNNNNNNNGG	3 cut(s)	224, 325, 1333
AgsI	TTSAA	7 cut(s)	518, 596, 1066, 1150, 1156, 1316, 1356
AhlI	ACTAGT	2 cut(s)	608, 917
AjnI	CCWGG	4 cut(s)	699, 1057, 1220, 1320
AjuI	GAANNNNNNNTTGG	2 cut(s)	1028, 1060
AluBI	AGCT	2 cut(s)	514, 727
AluI	AGCT	2 cut(s)	514, 727
AlwI	GGATC	1 cut(s)	622
Ama87I	CYCGRG	1 cut(s)	188
Aor51HI	AGCGCT	1 cut(s)	232
AoxI	GGCC	3 cut(s)	13, 192, 222
ApeKI	GCWGC	8 cut(s)	228, 354, 731, 951, 1472, 1475, 1478, 1481
ApoI	RAATTY	3 cut(s)	755, 1067, 1159
ArsI	GACNNNNNNTTYG	2 cut(s)	416, 448
Asp700I	GAANNNNTTC	2 cut(s)	409, 1131
AspA2I	CCTAGG	1 cut(s)	16
AspLEI	GCGC	2 cut(s)	233, 338
AspS9I	GGNCC	3 cut(s)	192, 1054, 1324
AsuC2I	CCSGG	3 cut(s)	88, 104, 682
AsuHPI	GGTGA	7 cut(s)	118, 340, 452, 469, 757, 828, 941
AsuII	TTCGAA	2 cut(s)	422, 1289
AsuNHI	GCTAGC	1 cut(s)	727
AvaI	CYCGRG	1 cut(s)	188
AvaII	GGWCC	2 cut(s)	1054, 1324
AvrII	CCTAGG	1 cut(s)	16
BanII	GRGCYC	1 cut(s)	249
BbsI	GAAGAC	1 cut(s)	1260
BbvI	GCAGC	8 cut(s)	240, 341, 743, 963, 1459, 1462, 1465, 1468
BccI	CCATC	1 cut(s)	469
BceAI	ACGGC	2 cut(s)	156, 1102
BciT130I	CCWGG	4 cut(s)	701, 1059, 1222, 1322
BciVI	GTATCC	1 cut(s)	1191
BclI	TGATCA	2 cut(s)	163, 1339
BcnI	CCSGG	3 cut(s)	88, 104, 682
BcuI	ACTAGT	2 cut(s)	608, 917
BfaI	CTAG	5 cut(s)	17, 180, 609, 728, 918
BfmI	CTRYAG	1 cut(s)	798
BfoI	RGCGCY	1 cut(s)	234
BfuI	GTATCC	1 cut(s)	1191
BglII	AGATCT	1 cut(s)	365
BlnI	CCTAGG	1 cut(s)	16
BlpI	GCTNAGC	1 cut(s)	234
BmcAI	AGTACT	1 cut(s)	1094
Bme1390I	CCNGG	7 cut(s)	88, 104, 682, 701, 1059, 1222, 1322
Bme18I	GGWCC	2 cut(s)	1054, 1324
BmeT110I	CYCGRG	1 cut(s)	188
BmgT120I	GGNCC	3 cut(s)	192, 1054, 1324
BmiI	GGNNCC	3 cut(s)	6, 193, 1056
BmrFI	CCNGG	7 cut(s)	88, 104, 682, 701, 1059, 1222, 1322
BmrI	ACTGGG	2 cut(s)	252, 1257
BmsI	GCATC	3 cut(s)	816, 889, 1414
BmtI	GCTAGC	1 cut(s)	731
BmuI	ACTGGG	2 cut(s)	252, 1257
BpiI	GAAGAC	1 cut(s)	1260
Bpu1102I	GCTNAGC	1 cut(s)	234
Bpu14I	TTCGAA	2 cut(s)	422, 1289
BpuMI	CCSGG	3 cut(s)	88, 104, 682
BsaAI	YACGTR	1 cut(s)	295
BsaJI	CCNNGG	3 cut(s)	16, 1057, 1327
BsaWI	WCCGGW	2 cut(s)	308, 542
BsaXI	ACNNNNNCTCC	2 cut(s)	795, 825
Bsc4I	CCNNNNNNNGG	3 cut(s)	224, 325, 1333
Bse118I	RCCGGY	1 cut(s)	224
Bse1I	ACTGG	3 cut(s)	75, 247, 1252
BseBI	CCWGG	4 cut(s)	701, 1059, 1222, 1322
BseDI	CCNNGG	3 cut(s)	16, 1057, 1327
BseGI	GGATG	4 cut(s)	565, 599, 943, 1242
BseLI	CCNNNNNNNGG	3 cut(s)	224, 325, 1333
BseMII	CTCAG	1 cut(s)	225
BseNI	ACTGG	3 cut(s)	75, 247, 1252
BseXI	GCAGC	8 cut(s)	240, 341, 743, 963, 1459, 1462, 1465, 1468
Bsh1236I	CGCG	1 cut(s)	338
Bsh1285I	CGRYCG	1 cut(s)	403
BshFI	GGCC	3 cut(s)	15, 194, 224
BsiEI	CGRYCG	1 cut(s)	403
BsiHKCI	CYCGRG	1 cut(s)	188
BsiSI	CCGG	6 cut(s)	87, 104, 225, 309, 543, 681
BslFI	GGGAC	1 cut(s)	649
BslI	CCNNNNNNNGG	3 cut(s)	224, 325, 1333
BsmFI	GGGAC	1 cut(s)	649
BsmI	GAATGC	1 cut(s)	208
BsnI	GGCC	3 cut(s)	15, 194, 224
BsoBI	CYCGRG	1 cut(s)	188
Bsp119I	TTCGAA	2 cut(s)	422, 1289
Bsp1286I	GDGCHC	1 cut(s)	249
Bsp143I	GATC	7 cut(s)	163, 365, 400, 614, 1309, 1339, 1497
Bsp1720I	GCTNAGC	1 cut(s)	234
BspACI	CCGC	8 cut(s)	44, 338, 345, 585, 633, 651, 735, 1164
BspANI	GGCC	3 cut(s)	15, 194, 224
BspCNI	CTCAG	1 cut(s)	226
BspFNI	CGCG	1 cut(s)	338
BspHI	TCATGA	1 cut(s)	1186
BspLI	GGNNCC	3 cut(s)	6, 193, 1056
BspOI	GCTAGC	1 cut(s)	731
BspPI	GGATC	1 cut(s)	622
BspT104I	TTCGAA	2 cut(s)	422, 1289
BsrFI	RCCGGY	1 cut(s)	224
BsrI	ACTGG	3 cut(s)	75, 247, 1252
BssAI	RCCGGY	1 cut(s)	224
BssECI	CCNNGG	3 cut(s)	16, 1057, 1327
BssMI	GATC	7 cut(s)	163, 365, 400, 614, 1309, 1339, 1497
BssNAI	GTATAC	1 cut(s)	1306
BssT1I	CCWWGG	2 cut(s)	16, 1327
Bst1107I	GTATAC	1 cut(s)	1306
Bst2UI	CCWGG	4 cut(s)	701, 1059, 1222, 1322
Bst4CI	ACNGT	4 cut(s)	259, 410, 986, 1349
BstAPI	GCANNNNNTGC	1 cut(s)	354
BstBAI	YACGTR	1 cut(s)	295
BstBI	TTCGAA	2 cut(s)	422, 1289
BstC8I	GCNNGC	4 cut(s)	226, 488, 583, 729
BstDEI	CTNAG	1 cut(s)	234
BstF5I	GGATG	4 cut(s)	565, 599, 943, 1242
BstFNI	CGCG	1 cut(s)	338
BstH2I	RGCGCY	1 cut(s)	234
BstHHI	GCGC	2 cut(s)	233, 338
BstKTI	GATC	7 cut(s)	166, 368, 403, 617, 1312, 1342, 1500
BstMBI	GATC	7 cut(s)	163, 365, 400, 614, 1309, 1339, 1497
BstMCI	CGRYCG	1 cut(s)	403
BstMWI	GCNNNNNNNGC	9 cut(s)	230, 244, 342, 351, 354, 724, 1424, 1478, 1481
BstNI	CCWGG	4 cut(s)	701, 1059, 1222, 1322
BstSCI	CCNGG	7 cut(s)	86, 102, 680, 699, 1057, 1220, 1320
BstSFI	CTRYAG	1 cut(s)	798
BstUI	CGCG	1 cut(s)	338
BstV1I	GCAGC	8 cut(s)	240, 341, 743, 963, 1459, 1462, 1465, 1468
BstV2I	GAAGAC	1 cut(s)	1260
BstX2I	RGATCY	1 cut(s)	365
BstXI	CCANNNNNNTGG	1 cut(s)	1328
BstYI	RGATCY	1 cut(s)	365
BstZ17I	GTATAC	1 cut(s)	1306
BsuI	GTATCC	1 cut(s)	1191
BsuRI	GGCC	3 cut(s)	15, 194, 224
BtgZI	GCGATG	1 cut(s)	152
BtsCI	GGATG	4 cut(s)	565, 599, 943, 1242
BtsI	GCAGTG	1 cut(s)	763
BtsIMutI	CAGTG	4 cut(s)	68, 255, 763, 991
Cac8I	GCNNGC	4 cut(s)	226, 488, 583, 729
CciI	TCATGA	1 cut(s)	1186
CfoI	GCGC	2 cut(s)	233, 338
Cfr10I	RCCGGY	1 cut(s)	224
Cfr13I	GGNCC	3 cut(s)	192, 1054, 1324
CseI	GACGC	2 cut(s)	126, 1291
CsiI	ACCWGGT	1 cut(s)	1320
Csp6I	GTAC	5 cut(s)	260, 381, 845, 990, 1093
CspCI	CAANNNNNGTGG	2 cut(s)	999, 1034
CviAII	CATG	5 cut(s)	161, 715, 1098, 1187, 1229
CviQI	GTAC	5 cut(s)	260, 381, 845, 990, 1093
DdeI	CTNAG	1 cut(s)	234
DpnI	GATC	7 cut(s)	165, 367, 402, 616, 1311, 1341, 1499
DpnII	GATC	7 cut(s)	163, 365, 400, 614, 1309, 1339, 1497
EaeI	YGGCCR	1 cut(s)	222
Eco130I	CCWWGG	2 cut(s)	16, 1327
Eco147I	AGGCCT	1 cut(s)	15
Eco24I	GRGCYC	1 cut(s)	249
Eco47I	GGWCC	2 cut(s)	1054, 1324
Eco47III	AGCGCT	1 cut(s)	232
Eco57I	CTGAAG	1 cut(s)	1404
Eco88I	CYCGRG	1 cut(s)	188
EcoO109I	RGGNCCY	1 cut(s)	1324
EcoRI	GAATTC	1 cut(s)	1159
EcoRII	CCWGG	4 cut(s)	699, 1057, 1220, 1320
EcoT14I	CCWWGG	2 cut(s)	16, 1327
EcoT38I	GRGCYC	1 cut(s)	249
ErhI	CCWWGG	2 cut(s)	16, 1327
FaeI	CATG	5 cut(s)	164, 718, 1101, 1190, 1232
FaqI	GGGAC	1 cut(s)	649
FatI	CATG	5 cut(s)	160, 714, 1097, 1186, 1228
FauI	CCCGC	3 cut(s)	578, 626, 644
FbaI	TGATCA	2 cut(s)	163, 1339
FblI	GTMKAC	1 cut(s)	1305
FokI	GGATG	4 cut(s)	572, 586, 950, 1249
FriOI	GRGCYC	1 cut(s)	249
FspBI	CTAG	5 cut(s)	17, 180, 609, 728, 918
GlaI	GCGC	2 cut(s)	232, 337
HaeII	RGCGCY	1 cut(s)	234
HaeIII	GGCC	3 cut(s)	15, 194, 224
HapII	CCGG	6 cut(s)	87, 104, 225, 309, 543, 681
HgaI	GACGC	2 cut(s)	126, 1291
HhaI	GCGC	2 cut(s)	233, 338
Hin1II	CATG	5 cut(s)	164, 718, 1101, 1190, 1232
Hin6I	GCGC	2 cut(s)	231, 336
HinP1I	GCGC	2 cut(s)	231, 336
HinfI	GANTC	5 cut(s)	274, 637, 789, 856, 1379
HpaII	CCGG	6 cut(s)	87, 104, 225, 309, 543, 681
HphI	GGTGA	7 cut(s)	118, 340, 452, 469, 757, 828, 941
Hpy166II	GTNNAC	2 cut(s)	149, 1306
Hpy188I	TCNGA	6 cut(s)	370, 576, 855, 1073, 1390, 1423
Hpy188III	TCNNGA	5 cut(s)	959, 1156, 1187, 1201, 1313
Hpy8I	GTNNAC	2 cut(s)	149, 1306
Hpy99I	CGWCG	1 cut(s)	815
HpyAV	CCTTC	2 cut(s)	288, 418
HpyCH4III	ACNGT	4 cut(s)	259, 410, 986, 1349
HpyCH4IV	ACGT	2 cut(s)	294, 1119
HpyCH4V	TGCA	8 cut(s)	453, 486, 504, 524, 568, 761, 829, 974
HpyF10VI	GCNNNNNNNGC	9 cut(s)	230, 244, 342, 351, 354, 724, 1424, 1478, 1481
HpyF3I	CTNAG	1 cut(s)	234
HpySE526I	ACGT	2 cut(s)	294, 1119
Hsp92II	CATG	5 cut(s)	164, 718, 1101, 1190, 1232
HspAI	GCGC	2 cut(s)	231, 336
KroI	GCCGGC	1 cut(s)	224
KroNI	GCCGGC	1 cut(s)	226
Ksp22I	TGATCA	2 cut(s)	163, 1339
Kzo9I	GATC	7 cut(s)	163, 365, 400, 614, 1309, 1339, 1497
LmnI	GCTCC	2 cut(s)	134, 671
Lsp1109I	GCAGC	8 cut(s)	240, 341, 743, 963, 1459, 1462, 1465, 1468
LweI	GCATC	3 cut(s)	816, 889, 1414
MabI	ACCWGGT	1 cut(s)	1320
MaeI	CTAG	5 cut(s)	17, 180, 609, 728, 918
MaeII	ACGT	2 cut(s)	294, 1119
MaeIII	GTNAC	5 cut(s)	173, 314, 545, 860, 1465
MalI	GATC	7 cut(s)	165, 367, 402, 616, 1311, 1341, 1499
MboI	GATC	7 cut(s)	163, 365, 400, 614, 1309, 1339, 1497
MboII	GAAGA	5 cut(s)	405, 1048, 1051, 1265, 1344
MfeI	CAATTG	1 cut(s)	481
MflI	RGATCY	1 cut(s)	365
MhlI	GDGCHC	1 cut(s)	249
MlyI	GAGTC	3 cut(s)	631, 850, 1388
MmeI	TCCRAC	2 cut(s)	871, 1214
MnlI	CCTC	9 cut(s)	5, 124, 613, 741, 773, 865, 880, 1194, 1268
MroNI	GCCGGC	1 cut(s)	224
MroXI	GAANNNNTTC	2 cut(s)	409, 1131
MseI	TTAA	5 cut(s)	78, 120, 153, 686, 1244
MslI	CAYNNNNRTG	2 cut(s)	713, 1364
MspA1I	CMGCKG	1 cut(s)	585
MspI	CCGG	6 cut(s)	87, 104, 225, 309, 543, 681
MspR9I	CCNGG	7 cut(s)	88, 104, 682, 701, 1059, 1222, 1322
MunI	CAATTG	1 cut(s)	481
Mva1269I	GAATGC	1 cut(s)	208
MvaI	CCWGG	4 cut(s)	701, 1059, 1222, 1322
MvnI	CGCG	1 cut(s)	338
MwoI	GCNNNNNNNGC	9 cut(s)	230, 244, 342, 351, 354, 724, 1424, 1478, 1481
NaeI	GCCGGC	1 cut(s)	226
NciI	CCSGG	3 cut(s)	88, 104, 682
NdeII	GATC	7 cut(s)	163, 365, 400, 614, 1309, 1339, 1497
NgoMIV	GCCGGC	1 cut(s)	224
NheI	GCTAGC	1 cut(s)	727
NlaIII	CATG	5 cut(s)	164, 718, 1101, 1190, 1232
NlaIV	GGNNCC	3 cut(s)	6, 193, 1056
NmuCI	GTSAC	1 cut(s)	173
NspV	TTCGAA	2 cut(s)	422, 1289
PagI	TCATGA	1 cut(s)	1186
PceI	AGGCCT	1 cut(s)	15
PcsI	WCGNNNNNNNCGW	1 cut(s)	291
PctI	GAATGC	1 cut(s)	208
PdiI	GCCGGC	1 cut(s)	226
PdmI	GAANNNNTTC	2 cut(s)	409, 1131
PfeI	GAWTC	2 cut(s)	274, 789
PfoI	TCCNGGA	1 cut(s)	86
Ple19I	CGATCG	1 cut(s)	403
PleI	GAGTC	3 cut(s)	631, 850, 1387
PpsI	GAGTC	3 cut(s)	631, 850, 1387
Ppu21I	YACGTR	1 cut(s)	295
PpuMI	RGGWCCY	1 cut(s)	1324
Psp1406I	AACGTT	1 cut(s)	1119
Psp5II	RGGWCCY	1 cut(s)	1324
Psp6I	CCWGG	4 cut(s)	699, 1057, 1220, 1320
PspGI	CCWGG	4 cut(s)	699, 1057, 1220, 1320
PspN4I	GGNNCC	3 cut(s)	6, 193, 1056
PspPI	GGNCC	3 cut(s)	192, 1054, 1324
PspPPI	RGGWCCY	1 cut(s)	1324
PsuI	RGATCY	1 cut(s)	365
PvuI	CGATCG	1 cut(s)	403
RsaI	GTAC	5 cut(s)	261, 382, 846, 991, 1094
RsaNI	GTAC	5 cut(s)	260, 381, 845, 990, 1093
RseI	CAYNNNNRTG	2 cut(s)	713, 1364
SaqAI	TTAA	5 cut(s)	78, 120, 153, 686, 1244
Sau3AI	GATC	7 cut(s)	163, 365, 400, 614, 1309, 1339, 1497
Sau96I	GGNCC	3 cut(s)	192, 1054, 1324
ScaI	AGTACT	1 cut(s)	1094
SchI	GAGTC	3 cut(s)	631, 850, 1388
ScrFI	CCNGG	7 cut(s)	88, 104, 682, 701, 1059, 1222, 1322
SduI	GDGCHC	1 cut(s)	249
SexAI	ACCWGGT	1 cut(s)	1320
SfaNI	GCATC	3 cut(s)	816, 889, 1414
SfcI	CTRYAG	1 cut(s)	798
SfuI	TTCGAA	2 cut(s)	422, 1289
SinI	GGWCC	2 cut(s)	1054, 1324
SmiMI	CAYNNNNRTG	2 cut(s)	713, 1364
SpeI	ACTAGT	2 cut(s)	608, 917
SseBI	AGGCCT	1 cut(s)	15
SsiI	CCGC	8 cut(s)	44, 338, 345, 585, 633, 651, 735, 1164
SspI	AATATT	2 cut(s)	624, 868
SspMI	CTAG	5 cut(s)	17, 180, 609, 728, 918
StuI	AGGCCT	1 cut(s)	15
StyD4I	CCNGG	7 cut(s)	86, 102, 680, 699, 1057, 1220, 1320
StyI	CCWWGG	2 cut(s)	16, 1327
TaaI	ACNGT	4 cut(s)	259, 410, 986, 1349
TaiI	ACGT	2 cut(s)	297, 1122
TaqI	TCGA	6 cut(s)	403, 422, 813, 1104, 1260, 1289
TatI	WGTACW	2 cut(s)	259, 1092
TauI	GCSGC	2 cut(s)	348, 737
TfiI	GAWTC	2 cut(s)	274, 789
Tru1I	TTAA	5 cut(s)	78, 120, 153, 686, 1244
Tru9I	TTAA	5 cut(s)	78, 120, 153, 686, 1244
TscAI	CASTG	4 cut(s)	75, 262, 770, 991
TseFI	GTSAC	1 cut(s)	173
TseI	GCWGC	8 cut(s)	228, 354, 731, 951, 1472, 1475, 1478, 1481
Tsp45I	GTSAC	1 cut(s)	173
TspDTI	ATGAA	6 cut(s)	954, 1038, 1140, 1158, 1223, 1253
TspGWI	ACGGA	1 cut(s)	1067
TspRI	CASTG	4 cut(s)	75, 262, 770, 991
VpaK11BI	GGWCC	2 cut(s)	1054, 1324
XapI	RAATTY	3 cut(s)	755, 1067, 1159
XcmI	CCANNNNNNNNNTGG	2 cut(s)	119, 424
XmaJI	CCTAGG	1 cut(s)	16
XmiI	GTMKAC	1 cut(s)	1305
XmnI	GAANNNNTTC	2 cut(s)	409, 1131
XspI	CTAG	5 cut(s)	17, 180, 609, 728, 918
ZrmI	AGTACT	1 cut(s)	1094

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.