FvH4_2g30500

Acetylglutamate kinase

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
Physical Location & Seq
Reverse (-)
23616255 .. 23617280
1026 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_2g30500.t1

Sequence Viewer

Length: 1026 bp
ATGTTGGGCGCTTCCGAAACCCTACTAAACCCTTCTCCTCCATCTCTCTCATTCCCTTCCCTTAAAACCCGCCGCAATCTTCTCCTCCCCAACACCCGCCTCACCTTCCGCCCCAAACCGCCGCACTCTCTTCCAATCAAAGCCCAACACGCCCCGGACCCGACCCTGCCCACTCCGGGTCAGCTCCGGGTCGACATTCTCTCCGAGTCCCTACCTTTCATCCGGAAATTTCGGGGCAAAACCATCGTGGTGAAATACGGCGGCGCCGCCATGAAGGACGCGAGCCTCCAGGCCACCGTCGTCAGAGACCTCGTCCTCCTCGCCTGCGTCGGCCTCCGCCCGATTCTCGTCCACGGCGGCGGCCCGGAGATCAACCTTTGGCTCAAGCGCCTCAACATCGAGGTCAACTTCCACGACGGCCTGCGCGTCACCGACGCCGCGACGATGGAGATCGTCTCCATGGTCCTCGCCGGGAAGGTCAACAAGAATCTGGTCTCGCTGATCAACCGGGAAGGCGTGAAGGCGATCGGGCTCTGCGGCTCCGACGGCGGGCTCATCACCGCCCGCCCCGCCCCGAACGCCACGAAATTAGGGTTCGTCGGGGAGGTGGCGCGTGTGGACCCGACGATTCTCCGGTCGATCGTTGACGACGGCCACATTCCGGTGATCGCTTCCGTGGCGTCGGATGAGTCCGGGCAGCAGTACAACATCAATGCGGACACGGTGGCCGGAGAAATCTCGGCGGCGCTGGGGGCGGAGAAGCTGATTCTGCTGACTGACGTGGCCGGAATCTTGGAGGACCGAGAGGATGCGAGTAGCTTGGTGAAGGAGATTGATATTAAAGGAGTGAAGAAGATGATGGAGGATGGGAAAATCGGAGGAGGGATGATTCCGAAAGTGAGCTGCTGCGTCAGGTCATTGGCTCAGGGAGTGAGGACTGCTAGTATTATTGATGGCCGGAAACCACATTCTCTGTTGCTTGAGGTTTTGACTGATGAAGGAGCTGGGACTATGATCACTGGCTAA

Protein Analysis

342

Amino Acids

36.12

Weight (kDa)

8.83

Isoelectric Point (pI)

40.89

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
AA_kinase PF00696 80 - 318 1.8e-45 Amino acid kinase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 263
AccI GTMKAC 1 cut(s) 192
AccII CGCG 4 cut(s) 281, 426, 440, 613
AccIII TCCGGA 1 cut(s) 222
AcoI YGGCCR 4 cut(s) 652, 726, 783, 955
AcsI RAATTY 1 cut(s) 227
AcyI GRCGYC 3 cut(s) 264, 435, 680
AfaI GTAC 1 cut(s) 704
AfiI CCNNNNNNNGG 3 cut(s) 176, 549, 661
AjiI CACGTC 1 cut(s) 781
AjnI CCWGG 1 cut(s) 288
AluBI AGCT 5 cut(s) 184, 763, 819, 903, 1004
AluI AGCT 5 cut(s) 184, 763, 819, 903, 1004
Alw26I GTCTC 3 cut(s) 300, 460, 499
Aor13HI TCCGGA 1 cut(s) 222
AoxI GGCC 8 cut(s) 291, 331, 361, 418, 652, 726, 783, 955
ApeKI GCWGC 3 cut(s) 697, 903, 906
ApoI RAATTY 1 cut(s) 227
AspLEI GCGC 6 cut(s) 11, 266, 390, 426, 613, 748
AspS9I GGNCC 5 cut(s) 157, 362, 463, 619, 799
AsuC2I CCSGG 7 cut(s) 155, 177, 188, 365, 472, 509, 694
AsuHPI GGTGA 6 cut(s) 94, 262, 421, 550, 676, 835
AvaII GGWCC 4 cut(s) 157, 463, 619, 799
BanI GGYRCC 1 cut(s) 263
BanII GRGCYC 2 cut(s) 534, 555
BbvI GCAGC 3 cut(s) 709, 890, 893
BccI CCATC 6 cut(s) 49, 251, 439, 853, 860, 947
BceAI ACGGC 5 cut(s) 274, 370, 433, 562, 667
BcgI CGANNNNNNTGC 2 cut(s) 226, 260
BciT130I CCWGG 1 cut(s) 290
BclI TGATCA 2 cut(s) 501, 1014
BcnI CCSGG 7 cut(s) 155, 177, 188, 365, 472, 509, 694
BcoDI GTCTC 3 cut(s) 300, 460, 499
BfaI CTAG 1 cut(s) 942
BfoI RGCGCY 4 cut(s) 12, 267, 391, 749
Bme1390I CCNGG 8 cut(s) 155, 177, 188, 290, 365, 472, 509, 694
Bme18I GGWCC 4 cut(s) 157, 463, 619, 799
BmgBI CACGTC 1 cut(s) 781
BmgT120I GGNCC 5 cut(s) 157, 362, 463, 619, 799
BmiI GGNNCC 4 cut(s) 159, 265, 541, 621
BmrFI CCNGG 8 cut(s) 155, 177, 188, 290, 365, 472, 509, 694
BmsI GCATC 1 cut(s) 799
BplI GAGNNNNNCTC 2 cut(s) 440, 472
BpmI CTGGAG 1 cut(s) 272
Bpu10I CCTNAGC 1 cut(s) 924
BpuEI CTTGAG 2 cut(s) 368, 1001
BpuMI CCSGG 7 cut(s) 155, 177, 188, 365, 472, 509, 694
BsaBI GATNNNNATC 1 cut(s) 449
BsaHI GRCGYC 3 cut(s) 264, 435, 680
BsaI GGTCTC 2 cut(s) 300, 499
BsaJI CCNNGG 4 cut(s) 153, 352, 459, 675
BsaWI WCCGGW 3 cut(s) 222, 633, 661
BsaXI ACNNNNNCTCC 2 cut(s) 185, 215
Bsc4I CCNNNNNNNGG 3 cut(s) 176, 549, 661
Bse1I ACTGG 1 cut(s) 1024
Bse8I GATNNNNATC 1 cut(s) 449
BseAI TCCGGA 1 cut(s) 222
BseBI CCWGG 1 cut(s) 290
BseDI CCNNGG 4 cut(s) 153, 352, 459, 675
BseGI GGATG 5 cut(s) 219, 691, 814, 871, 891
BseJI GATNNNNATC 1 cut(s) 449
BseLI CCNNNNNNNGG 3 cut(s) 176, 549, 661
BseMII CTCAG 1 cut(s) 938
BseNI ACTGG 1 cut(s) 1024
BseRI GAGGAG 4 cut(s) 27, 74, 308, 894
BseXI GCAGC 3 cut(s) 709, 890, 893
BseYI CCCAGC 2 cut(s) 748, 1004
Bsh1236I CGCG 4 cut(s) 281, 426, 440, 613
Bsh1285I CGRYCG 3 cut(s) 528, 638, 642
BshFI GGCC 8 cut(s) 293, 333, 363, 420, 654, 728, 785, 957
BshNI GGYRCC 1 cut(s) 263
BsiEI CGRYCG 3 cut(s) 528, 638, 642
BslFI GGGAC 2 cut(s) 193, 1021
BslI CCNNNNNNNGG 3 cut(s) 176, 549, 661
BsmAI GTCTC 3 cut(s) 300, 460, 499
BsmBI CGTCTC 1 cut(s) 460
BsmFI GGGAC 2 cut(s) 193, 1021
BsnI GGCC 8 cut(s) 293, 333, 363, 420, 654, 728, 785, 957
Bso31I GGTCTC 2 cut(s) 300, 499
Bsp1286I GDGCHC 2 cut(s) 534, 555
Bsp13I TCCGGA 1 cut(s) 222
Bsp143I GATC 7 cut(s) 369, 450, 501, 525, 639, 666, 1014
Bsp19I CCATGG 1 cut(s) 459
BspANI GGCC 8 cut(s) 293, 333, 363, 420, 654, 728, 785, 957
BspCNI CTCAG 1 cut(s) 937
BspEI TCCGGA 1 cut(s) 222
BspFNI CGCG 4 cut(s) 281, 426, 440, 613
BspLI GGNNCC 4 cut(s) 159, 265, 541, 621
BspT107I GGYRCC 1 cut(s) 263
BspTNI GGTCTC 2 cut(s) 300, 499
BsrI ACTGG 1 cut(s) 1024
BssECI CCNNGG 4 cut(s) 153, 352, 459, 675
BssMI GATC 7 cut(s) 369, 450, 501, 525, 639, 666, 1014
BssNI GRCGYC 3 cut(s) 264, 435, 680
BssT1I CCWWGG 1 cut(s) 459
Bst2UI CCWGG 1 cut(s) 290
Bst4CI ACNGT 2 cut(s) 298, 724
Bst6I CTCTTC 1 cut(s) 135
BstACI GRCGYC 3 cut(s) 264, 435, 680
BstC8I GCNNGC 5 cut(s) 283, 325, 422, 551, 565
BstDEI CTNAG 1 cut(s) 924
BstDSI CCRYGG 3 cut(s) 352, 459, 675
BstF5I GGATG 5 cut(s) 219, 691, 814, 871, 891
BstFNI CGCG 4 cut(s) 281, 426, 440, 613
BstH2I RGCGCY 4 cut(s) 12, 267, 391, 749
BstHHI GCGC 6 cut(s) 11, 266, 390, 426, 613, 748
BstKTI GATC 7 cut(s) 372, 453, 504, 528, 642, 669, 1017
BstMAI GTCTC 3 cut(s) 300, 460, 499
BstMBI GATC 7 cut(s) 369, 450, 501, 525, 639, 666, 1014
BstMCI CGRYCG 3 cut(s) 528, 638, 642
BstMWI GCNNNNNNNGC 7 cut(s) 149, 546, 569, 578, 677, 752, 769
BstNI CCWGG 1 cut(s) 290
BstSCI CCNGG 8 cut(s) 153, 175, 186, 288, 363, 470, 507, 692
BstUI CGCG 4 cut(s) 281, 426, 440, 613
BstV1I GCAGC 3 cut(s) 709, 890, 893
BsuRI GGCC 8 cut(s) 293, 333, 363, 420, 654, 728, 785, 957
BtgI CCRYGG 3 cut(s) 352, 459, 675
BtrI CACGTC 1 cut(s) 781
BtsCI GGATG 5 cut(s) 219, 691, 814, 871, 891
BtsIMutI CAGTG 1 cut(s) 1017
Cac8I GCNNGC 5 cut(s) 283, 325, 422, 551, 565
CfoI GCGC 6 cut(s) 11, 266, 390, 426, 613, 748
Cfr13I GGNCC 5 cut(s) 157, 362, 463, 619, 799
CseI GACGC 6 cut(s) 287, 316, 415, 443, 669, 898
Csp6I GTAC 1 cut(s) 703
CviAII CATG 2 cut(s) 271, 460
CviQI GTAC 1 cut(s) 703
DdeI CTNAG 1 cut(s) 924
DinI GGCGCC 1 cut(s) 265
DpnI GATC 7 cut(s) 371, 452, 503, 527, 641, 668, 1016
DpnII GATC 7 cut(s) 369, 450, 501, 525, 639, 666, 1014
EaeI YGGCCR 4 cut(s) 652, 726, 783, 955
Eam1104I CTCTTC 1 cut(s) 135
EarI CTCTTC 1 cut(s) 135
EciI GGCGGA 3 cut(s) 98, 326, 770
Eco130I CCWWGG 1 cut(s) 459
Eco24I GRGCYC 2 cut(s) 534, 555
Eco31I GGTCTC 2 cut(s) 300, 499
Eco47I GGWCC 4 cut(s) 157, 463, 619, 799
EcoRII CCWGG 1 cut(s) 288
EcoT14I CCWWGG 1 cut(s) 459
EcoT38I GRGCYC 2 cut(s) 534, 555
EgeI GGCGCC 1 cut(s) 265
EheI GGCGCC 1 cut(s) 265
ErhI CCWWGG 1 cut(s) 459
Esp3I CGTCTC 1 cut(s) 460
FaeI CATG 2 cut(s) 274, 463
FaiI YATR 3 cut(s) 272, 461, 1013
FaqI GGGAC 2 cut(s) 193, 1021
FatI CATG 2 cut(s) 270, 459
FauI CCCGC 5 cut(s) 77, 104, 542, 572, 577
FbaI TGATCA 2 cut(s) 501, 1014
FblI GTMKAC 1 cut(s) 192
FokI GGATG 5 cut(s) 206, 698, 821, 878, 898
FriOI GRGCYC 2 cut(s) 534, 555
FspBI CTAG 1 cut(s) 942
GlaI GCGC 6 cut(s) 10, 265, 389, 425, 612, 747
GsaI CCCAGC 2 cut(s) 752, 1008
GsuI CTGGAG 1 cut(s) 272
HaeII RGCGCY 4 cut(s) 12, 267, 391, 749
HaeIII GGCC 8 cut(s) 293, 333, 363, 420, 654, 728, 785, 957
HgaI GACGC 6 cut(s) 287, 316, 415, 443, 669, 898
HhaI GCGC 6 cut(s) 11, 266, 390, 426, 613, 748
Hin1I GRCGYC 3 cut(s) 264, 435, 680
Hin1II CATG 2 cut(s) 274, 463
Hin6I GCGC 6 cut(s) 9, 264, 388, 424, 611, 746
HinP1I GCGC 6 cut(s) 9, 264, 388, 424, 611, 746
HincII GTYRAC 4 cut(s) 193, 406, 481, 646
HindII GTYRAC 4 cut(s) 193, 406, 481, 646
HinfI GANTC 8 cut(s) 206, 343, 487, 628, 689, 766, 789, 889
HphI GGTGA 6 cut(s) 94, 262, 421, 550, 676, 835
Hpy166II GTNNAC 6 cut(s) 193, 352, 406, 481, 619, 646
Hpy188I TCNGA 7 cut(s) 16, 205, 305, 544, 685, 878, 894
Hpy188III TCNNGA 1 cut(s) 223
Hpy8I GTNNAC 6 cut(s) 193, 352, 406, 481, 619, 646
HpyAV CCTTC 9 cut(s) 42, 66, 115, 268, 469, 506, 514, 820, 992
HpyCH4III ACNGT 2 cut(s) 298, 724
HpyCH4IV ACGT 1 cut(s) 780
HpyF10VI GCNNNNNNNGC 7 cut(s) 149, 546, 569, 578, 677, 752, 769
HpyF3I CTNAG 1 cut(s) 924
HpySE526I ACGT 1 cut(s) 780
Hsp92I GRCGYC 3 cut(s) 264, 435, 680
Hsp92II CATG 2 cut(s) 274, 463
HspAI GCGC 6 cut(s) 9, 264, 388, 424, 611, 746
KasI GGCGCC 1 cut(s) 263
Kpn2I TCCGGA 1 cut(s) 222
Ksp22I TGATCA 2 cut(s) 501, 1014
Kzo9I GATC 7 cut(s) 369, 450, 501, 525, 639, 666, 1014
LmnI GCTCC 3 cut(s) 189, 545, 1001
Lsp1109I GCAGC 3 cut(s) 709, 890, 893
LweI GCATC 1 cut(s) 799
MaeI CTAG 1 cut(s) 942
MaeII ACGT 1 cut(s) 780
MaeIII GTNAC 1 cut(s) 427
MalI GATC 7 cut(s) 371, 452, 503, 527, 641, 668, 1016
MboI GATC 7 cut(s) 369, 450, 501, 525, 639, 666, 1014
MboII GAAGA 4 cut(s) 71, 122, 862, 865
MhlI GDGCHC 2 cut(s) 534, 555
MluCI AATT 2 cut(s) 227, 587
Mly113I GGCGCC 1 cut(s) 264
MlyI GAGTC 2 cut(s) 215, 698
MmeI TCCRAC 2 cut(s) 567, 663
MroI TCCGGA 1 cut(s) 222
MseI TTAA 2 cut(s) 63, 840
MslI CAYNNNNRTG 2 cut(s) 248, 662
MspR9I CCNGG 8 cut(s) 155, 177, 188, 290, 365, 472, 509, 694
MvaI CCWGG 1 cut(s) 290
MvnI CGCG 4 cut(s) 281, 426, 440, 613
MwoI GCNNNNNNNGC 7 cut(s) 149, 546, 569, 578, 677, 752, 769
NarI GGCGCC 1 cut(s) 264
NciI CCSGG 7 cut(s) 155, 177, 188, 365, 472, 509, 694
NcoI CCATGG 1 cut(s) 459
NdeII GATC 7 cut(s) 369, 450, 501, 525, 639, 666, 1014
NlaIII CATG 2 cut(s) 274, 463
NlaIV GGNNCC 4 cut(s) 159, 265, 541, 621
NmeAIII GCCGAG 1 cut(s) 719
NmuCI GTSAC 1 cut(s) 427
PcsI WCGNNNNNNNCGW 1 cut(s) 423
PfeI GAWTC 6 cut(s) 343, 487, 628, 766, 789, 889
PflFI GACNNNGTC 1 cut(s) 311
Ple19I CGATCG 2 cut(s) 528, 642
PleI GAGTC 2 cut(s) 214, 697
PluTI GGCGCC 1 cut(s) 267
PpsI GAGTC 2 cut(s) 214, 697
Psp6I CCWGG 1 cut(s) 288
PspFI CCCAGC 2 cut(s) 748, 1004
PspGI CCWGG 1 cut(s) 288
PspN4I GGNNCC 4 cut(s) 159, 265, 541, 621
PspPI GGNCC 5 cut(s) 157, 362, 463, 619, 799
PsyI GACNNNGTC 1 cut(s) 311
PvuI CGATCG 2 cut(s) 528, 642
RsaI GTAC 1 cut(s) 704
RsaNI GTAC 1 cut(s) 703
RseI CAYNNNNRTG 2 cut(s) 248, 662
SalI GTCGAC 1 cut(s) 191
SaqAI TTAA 2 cut(s) 63, 840
Sau3AI GATC 7 cut(s) 369, 450, 501, 525, 639, 666, 1014
Sau96I GGNCC 5 cut(s) 157, 362, 463, 619, 799
SchI GAGTC 2 cut(s) 215, 698
ScrFI CCNGG 8 cut(s) 155, 177, 188, 290, 365, 472, 509, 694
SduI GDGCHC 2 cut(s) 534, 555
SfaNI GCATC 1 cut(s) 799
SfoI GGCGCC 1 cut(s) 265
SinI GGWCC 4 cut(s) 157, 463, 619, 799
SmiMI CAYNNNNRTG 2 cut(s) 248, 662
SmlI CTYRAG 2 cut(s) 383, 980
SmoI CTYRAG 2 cut(s) 383, 980
Sse9I AATT 2 cut(s) 227, 587
SspDI GGCGCC 1 cut(s) 263
SspMI CTAG 1 cut(s) 942
StyD4I CCNGG 8 cut(s) 153, 175, 186, 288, 363, 470, 507, 692
StyI CCWWGG 1 cut(s) 459
TaaI ACNGT 2 cut(s) 298, 724
TaiI ACGT 1 cut(s) 783
TaqI TCGA 3 cut(s) 192, 399, 638
TaqII GACCGA 1 cut(s) 816
TasI AATT 2 cut(s) 227, 587
TatI WGTACW 1 cut(s) 702
TauI GCSGC 9 cut(s) 75, 124, 264, 269, 360, 363, 440, 540, 746
TfiI GAWTC 6 cut(s) 343, 487, 628, 766, 789, 889
Tru1I TTAA 2 cut(s) 63, 840
Tru9I TTAA 2 cut(s) 63, 840
TscAI CASTG 1 cut(s) 1024
TseFI GTSAC 1 cut(s) 427
TseI GCWGC 3 cut(s) 697, 903, 906
Tsp45I GTSAC 1 cut(s) 427
TspDTI ATGAA 3 cut(s) 208, 287, 1011
TspGWI ACGGA 1 cut(s) 664
TspRI CASTG 1 cut(s) 1024
Tth111I GACNNNGTC 1 cut(s) 311
VpaK11BI GGWCC 4 cut(s) 157, 463, 619, 799
XapI RAATTY 1 cut(s) 227
XmiI GTMKAC 1 cut(s) 192
XspI CTAG 1 cut(s) 942
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.