RLG00000012398

Acetylglutamate kinase

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr3
Physical Location & Seq
Forward (+)
18338119 .. 18340745
2627 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000012398

Sequence Viewer

Length: 996 bp
ATGTTGGCTTCTAAAACCCACCCTTGTCCATCTCTGATCTCATTCCCTCCTTCCCCAACACCCCGCAACCTCCCCAACACCCTCACCTTCTTCCGCCCCAAATGTCCACCGCACTCGCACTCACTCTCAATCAAAGCCCAACACCCGGCTCATACCACTCCAGGCAAAACCATCGTCGTCAAGTACGGCGGCGCCGCCATGAAGGACGAGACCCTCCAGGCCACCGTCGTCAGAGACCTCGTCCTCCTCGCCTGCGTCGGCCTCCGCCCCATCTTGGTCCACGGCGGCGGCCTCGAGATCAACCTCTGGCTCAAGCGCCTCAACATCGAGGTCAACTTCCACGACGGCCTCCGTGTCACCGACGCGCCCACCATGGAGATCGTCTCCATGGTCTTGGCCGGCAAAGTCAACAAGCATTTGGTCTCCCTGATCAACCGGGAAGGAGTCAAGGCCATCGGCCTCTGCGGCTCCGACGGCGAGCTCATCACCGCTCGCCCCGCCCCCAACGCCGCCAAGTTAGGGTTTGTCGACGAGCCACATTCCGGTGATTGCGTCGGAGTGGTAGAGGCTGTTGAGGTTGAAGGTGGCTTGGAAGTTTTCAGGGTCAGAAGAAGTGTAGAAGGCGGGCTTGGCGGTGGGGACGGTGGTGGTGGTGGTGGTGCTGTTGGAGTTTCGTCTGCAGTTTCGACGATTTCAATTTGGAGGGCGAGGCATGGAGCAGGAAAAGGAGGCTTTGGGAGCGCGGGTTGCGGAAGAAGAAGAGGAGAGGAGGAGAGAGGTGGCCCAAACTCAGAATCCGGCCCAGAGCCCCAGGCCAAACTCCAAGCCCAGGAACCTGCTCTGAGCAACACCACCGCTGTTGCAAGTTCCAGCGGTCGATTACTCCAGGAGGCCATAGATCGCCTCCCCTTTGTATCCCAACTAATCGGACCACCAACGCAGCATGTTCGACAAATTAGATCTGAACTGATCTGTCCCAACTTGCGCGACCCCTAG

Protein Analysis

332

Amino Acids

34.66

Weight (kDa)

8.88

Isoelectric Point (pI)

51.1

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
AA_kinase PF00696 56 - 166 1.6e-17 Amino acid kinase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 844
AccB1I GGYRCC 1 cut(s) 191
AccBSI CCGCTC 1 cut(s) 491
AccI GTMKAC 1 cut(s) 528
AccII CGCG 3 cut(s) 365, 743, 987
AcoI YGGCCR 1 cut(s) 396
AcyI GRCGYC 1 cut(s) 192
AfaI GTAC 1 cut(s) 185
AfiI CCNNNNNNNGG 5 cut(s) 145, 274, 519, 542, 829
AgsI TTSAA 2 cut(s) 581, 696
AjnI CCWGG 5 cut(s) 160, 216, 810, 828, 885
AjuI GAANNNNNNNTTGG 2 cut(s) 612, 644
AluBI AGCT 1 cut(s) 481
AluI AGCT 1 cut(s) 481
Alw21I GWGCWC 1 cut(s) 483
Alw26I GTCTC 4 cut(s) 203, 228, 388, 427
Ama87I CYCGRG 1 cut(s) 293
ApeKI GCWGC 1 cut(s) 940
ArsI GACNNNNNNTTYG 2 cut(s) 159, 191
AspLEI GCGC 5 cut(s) 194, 318, 367, 743, 987
AspS9I GGNCC 4 cut(s) 277, 782, 800, 929
AsuC2I CCSGG 2 cut(s) 146, 437
AsuHPI GGTGA 4 cut(s) 76, 349, 478, 557
AvaI CYCGRG 1 cut(s) 293
AvaII GGWCC 2 cut(s) 277, 929
BanI GGYRCC 1 cut(s) 191
BanII GRGCYC 2 cut(s) 483, 810
Bbv12I GWGCWC 1 cut(s) 483
BbvI GCAGC 1 cut(s) 952
BccI CCATC 4 cut(s) 37, 179, 278, 461
BceAI ACGGC 4 cut(s) 202, 298, 361, 490
BcgI CGANNNNNNTGC 4 cut(s) 154, 188, 929, 963
BciT130I CCWGG 5 cut(s) 162, 218, 812, 830, 887
BciVI GTATCC 1 cut(s) 925
BclI TGATCA 1 cut(s) 429
BcnI CCSGG 2 cut(s) 146, 437
BcoDI GTCTC 4 cut(s) 203, 228, 388, 427
BfaI CTAG 1 cut(s) 994
BfmI CTRYAG 1 cut(s) 678
BfoI RGCGCY 2 cut(s) 195, 319
BfuAI ACCTGC 1 cut(s) 844
BfuI GTATCC 1 cut(s) 925
BglI GCCNNNNNGGC 1 cut(s) 465
BglII AGATCT 1 cut(s) 959
BisI GCNGC 7 cut(s) 190, 195, 286, 289, 466, 510, 941
BlsI GCNGC 7 cut(s) 191, 196, 287, 290, 467, 511, 942
Bme1390I CCNGG 7 cut(s) 146, 162, 218, 437, 812, 830, 887
Bme18I GGWCC 2 cut(s) 277, 929
BmeT110I CYCGRG 1 cut(s) 293
BmgT120I GGNCC 4 cut(s) 277, 782, 800, 929
BmiI GGNNCC 3 cut(s) 193, 469, 834
BmrFI CCNGG 7 cut(s) 146, 162, 218, 437, 812, 830, 887
BplI GAGNNNNNCTC 2 cut(s) 368, 400
BpmI CTGGAG 3 cut(s) 144, 200, 869
BpuEI CTTGAG 1 cut(s) 296
BpuMI CCSGG 2 cut(s) 146, 437
BsaHI GRCGYC 1 cut(s) 192
BsaI GGTCTC 3 cut(s) 203, 228, 427
BsaJI CCNNGG 5 cut(s) 280, 372, 387, 810, 828
BsaWI WCCGGW 1 cut(s) 542
BsaXI ACNNNNNCTCC 2 cut(s) 730, 760
Bsc4I CCNNNNNNNGG 5 cut(s) 145, 274, 519, 542, 829
Bse118I RCCGGY 1 cut(s) 398
BseBI CCWGG 5 cut(s) 162, 218, 812, 830, 887
BseDI CCNNGG 5 cut(s) 280, 372, 387, 810, 828
BseLI CCNNNNNNNGG 5 cut(s) 145, 274, 519, 542, 829
BseMII CTCAG 2 cut(s) 804, 833
BseRI GAGGAG 4 cut(s) 236, 777, 782, 785
BseXI GCAGC 1 cut(s) 952
Bsh1236I CGCG 3 cut(s) 365, 743, 987
Bsh1285I CGRYCG 1 cut(s) 877
BshNI GGYRCC 1 cut(s) 191
BsiEI CGRYCG 1 cut(s) 877
BsiHKAI GWGCWC 1 cut(s) 483
BsiHKCI CYCGRG 1 cut(s) 293
BsiSI CCGG 5 cut(s) 146, 399, 436, 543, 798
BslFI GGGAC 2 cut(s) 653, 960
BslI CCNNNNNNNGG 5 cut(s) 145, 274, 519, 542, 829
BsmAI GTCTC 4 cut(s) 203, 228, 388, 427
BsmBI CGTCTC 1 cut(s) 388
BsmFI GGGAC 2 cut(s) 653, 960
Bso31I GGTCTC 3 cut(s) 203, 228, 427
BsoBI CYCGRG 1 cut(s) 293
Bsp1286I GDGCHC 2 cut(s) 483, 810
Bsp143I GATC 7 cut(s) 36, 297, 378, 429, 898, 959, 969
Bsp19I CCATGG 2 cut(s) 372, 387
BspCNI CTCAG 2 cut(s) 803, 834
BspFNI CGCG 3 cut(s) 365, 743, 987
BspLI GGNNCC 3 cut(s) 193, 469, 834
BspMAI CTGCAG 1 cut(s) 682
BspMI ACCTGC 1 cut(s) 844
BspT107I GGYRCC 1 cut(s) 191
BspTNI GGTCTC 3 cut(s) 203, 228, 427
BsrBI CCGCTC 1 cut(s) 491
BsrFI RCCGGY 1 cut(s) 398
BssAI RCCGGY 1 cut(s) 398
BssECI CCNNGG 5 cut(s) 280, 372, 387, 810, 828
BssMI GATC 7 cut(s) 36, 297, 378, 429, 898, 959, 969
BssNI GRCGYC 1 cut(s) 192
BssT1I CCWWGG 2 cut(s) 372, 387
Bst2UI CCWGG 5 cut(s) 162, 218, 812, 830, 887
Bst4CI ACNGT 2 cut(s) 226, 644
Bst6I CTCTTC 1 cut(s) 754
BstACI GRCGYC 1 cut(s) 192
BstC8I GCNNGC 5 cut(s) 253, 400, 479, 493, 626
BstDEI CTNAG 2 cut(s) 790, 842
BstDSI CCRYGG 3 cut(s) 280, 372, 387
BstFNI CGCG 3 cut(s) 365, 743, 987
BstH2I RGCGCY 2 cut(s) 195, 319
BstHHI GCGC 5 cut(s) 194, 318, 367, 743, 987
BstKTI GATC 7 cut(s) 39, 300, 381, 432, 901, 962, 972
BstMAI GTCTC 4 cut(s) 203, 228, 388, 427
BstMBI GATC 7 cut(s) 36, 297, 378, 429, 898, 959, 969
BstMCI CGRYCG 1 cut(s) 877
BstMWI GCNNNNNNNGC 7 cut(s) 465, 474, 497, 506, 630, 738, 747
BstNI CCWGG 5 cut(s) 162, 218, 812, 830, 887
BstNSI RCATGY 1 cut(s) 947
BstSCI CCNGG 7 cut(s) 144, 160, 216, 435, 810, 828, 885
BstSFI CTRYAG 1 cut(s) 678
BstUI CGCG 3 cut(s) 365, 743, 987
BstV1I GCAGC 1 cut(s) 952
BstX2I RGATCY 1 cut(s) 959
BstXI CCANNNNNNTGG 1 cut(s) 394
BstYI RGATCY 1 cut(s) 959
BsuI GTATCC 1 cut(s) 925
BtgI CCRYGG 3 cut(s) 280, 372, 387
BveI ACCTGC 1 cut(s) 844
Cac8I GCNNGC 5 cut(s) 253, 400, 479, 493, 626
CfoI GCGC 5 cut(s) 194, 318, 367, 743, 987
Cfr10I RCCGGY 1 cut(s) 398
Cfr13I GGNCC 4 cut(s) 277, 782, 800, 929
CseI GACGC 3 cut(s) 244, 371, 541
Csp6I GTAC 1 cut(s) 184
CspCI CAANNNNNGTGG 2 cut(s) 841, 876
CviAII CATG 5 cut(s) 199, 373, 388, 713, 944
CviQI GTAC 1 cut(s) 184
DdeI CTNAG 2 cut(s) 790, 842
DinI GGCGCC 1 cut(s) 193
DpnI GATC 7 cut(s) 38, 299, 380, 431, 900, 961, 971
DpnII GATC 7 cut(s) 36, 297, 378, 429, 898, 959, 969
EaeI YGGCCR 1 cut(s) 396
Eam1104I CTCTTC 1 cut(s) 754
EarI CTCTTC 1 cut(s) 754
EciI GGCGGA 2 cut(s) 83, 254
Ecl136II GAGCTC 1 cut(s) 481
Eco130I CCWWGG 2 cut(s) 372, 387
Eco24I GRGCYC 2 cut(s) 483, 810
Eco31I GGTCTC 3 cut(s) 203, 228, 427
Eco47I GGWCC 2 cut(s) 277, 929
Eco53kI GAGCTC 1 cut(s) 481
Eco88I CYCGRG 1 cut(s) 293
EcoICRI GAGCTC 1 cut(s) 481
EcoRII CCWGG 5 cut(s) 160, 216, 810, 828, 885
EcoT14I CCWWGG 2 cut(s) 372, 387
EcoT38I GRGCYC 2 cut(s) 483, 810
EgeI GGCGCC 1 cut(s) 193
EheI GGCGCC 1 cut(s) 193
ErhI CCWWGG 2 cut(s) 372, 387
Esp3I CGTCTC 1 cut(s) 388
FaeI CATG 5 cut(s) 202, 376, 391, 716, 947
FaiI YATR 7 cut(s) 153, 200, 374, 389, 714, 896, 945
FalI AAGNNNNNCTT 2 cut(s) 612, 644
FaqI GGGAC 2 cut(s) 653, 960
FatI CATG 5 cut(s) 198, 372, 387, 712, 943
FauI CCCGC 4 cut(s) 71, 505, 617, 736
FbaI TGATCA 1 cut(s) 429
FblI GTMKAC 1 cut(s) 528
Fnu4HI GCNGC 7 cut(s) 190, 195, 286, 289, 466, 510, 941
FriOI GRGCYC 2 cut(s) 483, 810
Fsp4HI GCNGC 7 cut(s) 190, 195, 286, 289, 466, 510, 941
FspBI CTAG 1 cut(s) 994
GlaI GCGC 5 cut(s) 193, 317, 366, 742, 986
GluI GCNGC 7 cut(s) 190, 195, 286, 289, 466, 510, 941
GsuI CTGGAG 3 cut(s) 144, 200, 869
HaeII RGCGCY 2 cut(s) 195, 319
HapII CCGG 5 cut(s) 146, 399, 436, 543, 798
HgaI GACGC 3 cut(s) 244, 371, 541
HhaI GCGC 5 cut(s) 194, 318, 367, 743, 987
Hin1I GRCGYC 1 cut(s) 192
Hin1II CATG 5 cut(s) 202, 376, 391, 716, 947
Hin6I GCGC 5 cut(s) 192, 316, 365, 741, 985
HinP1I GCGC 5 cut(s) 192, 316, 365, 741, 985
HincII GTYRAC 3 cut(s) 334, 409, 529
HindII GTYRAC 3 cut(s) 334, 409, 529
HinfI GANTC 2 cut(s) 444, 794
HpaII CCGG 5 cut(s) 146, 399, 436, 543, 798
HphI GGTGA 4 cut(s) 76, 349, 478, 557
Hpy166II GTNNAC 5 cut(s) 107, 280, 334, 409, 529
Hpy188I TCNGA 9 cut(s) 36, 233, 472, 557, 608, 793, 843, 929, 964
Hpy188III TCNNGA 1 cut(s) 295
Hpy8I GTNNAC 5 cut(s) 107, 280, 334, 409, 529
Hpy99I CGWCG 9 cut(s) 179, 230, 260, 347, 365, 476, 533, 557, 691
HpyAV CCTTC 6 cut(s) 60, 97, 196, 434, 575, 614
HpyCH4III ACNGT 2 cut(s) 226, 644
HpyCH4V TGCA 2 cut(s) 680, 863
HpyF10VI GCNNNNNNNGC 7 cut(s) 465, 474, 497, 506, 630, 738, 747
HpyF3I CTNAG 2 cut(s) 790, 842
Hsp92I GRCGYC 1 cut(s) 192
Hsp92II CATG 5 cut(s) 202, 376, 391, 716, 947
HspAI GCGC 5 cut(s) 192, 316, 365, 741, 985
KasI GGCGCC 1 cut(s) 191
KroI GCCGGC 1 cut(s) 398
KroNI GCCGGC 1 cut(s) 400
Ksp22I TGATCA 1 cut(s) 429
Kzo9I GATC 7 cut(s) 36, 297, 378, 429, 898, 959, 969
LmnI GCTCC 3 cut(s) 473, 716, 738
Lsp1109I GCAGC 1 cut(s) 952
MaeI CTAG 1 cut(s) 994
MaeIII GTNAC 1 cut(s) 355
MalI GATC 7 cut(s) 38, 299, 380, 431, 900, 961, 971
MbiI CCGCTC 1 cut(s) 491
MboI GATC 7 cut(s) 36, 297, 378, 429, 898, 959, 969
MboII GAAGA 5 cut(s) 82, 621, 765, 768, 771
MflI RGATCY 1 cut(s) 959
MhlI GDGCHC 2 cut(s) 483, 810
MluCI AATT 2 cut(s) 696, 954
Mly113I GGCGCC 1 cut(s) 192
MlyI GAGTC 1 cut(s) 453
MmeI TCCRAC 3 cut(s) 495, 535, 646
MroNI GCCGGC 1 cut(s) 398
MslI CAYNNNNRTG 1 cut(s) 543
MspA1I CMGCKG 2 cut(s) 857, 873
MspI CCGG 5 cut(s) 146, 399, 436, 543, 798
MspR9I CCNGG 7 cut(s) 146, 162, 218, 437, 812, 830, 887
MvaI CCWGG 5 cut(s) 162, 218, 812, 830, 887
MvnI CGCG 3 cut(s) 365, 743, 987
MwoI GCNNNNNNNGC 7 cut(s) 465, 474, 497, 506, 630, 738, 747
NaeI GCCGGC 1 cut(s) 400
NarI GGCGCC 1 cut(s) 192
NciI CCSGG 2 cut(s) 146, 437
NcoI CCATGG 2 cut(s) 372, 387
NdeII GATC 7 cut(s) 36, 297, 378, 429, 898, 959, 969
NgoMIV GCCGGC 1 cut(s) 398
NlaIII CATG 5 cut(s) 202, 376, 391, 716, 947
NlaIV GGNNCC 3 cut(s) 193, 469, 834
NmuCI GTSAC 1 cut(s) 355
NspI RCATGY 1 cut(s) 947
PaeR7I CTCGAG 1 cut(s) 293
PdiI GCCGGC 1 cut(s) 400
PfeI GAWTC 1 cut(s) 794
PflFI GACNNNGTC 1 cut(s) 239
PfoI TCCNGGA 1 cut(s) 885
PkrI GCNGC 7 cut(s) 191, 196, 287, 290, 467, 511, 942
PleI GAGTC 1 cut(s) 452
PluTI GGCGCC 1 cut(s) 195
PpsI GAGTC 1 cut(s) 452
Psp124BI GAGCTC 1 cut(s) 483
Psp6I CCWGG 5 cut(s) 160, 216, 810, 828, 885
PspGI CCWGG 5 cut(s) 160, 216, 810, 828, 885
PspN4I GGNNCC 3 cut(s) 193, 469, 834
PspPI GGNCC 4 cut(s) 277, 782, 800, 929
PstI CTGCAG 1 cut(s) 682
PsuI RGATCY 1 cut(s) 959
PsyI GACNNNGTC 1 cut(s) 239
RsaI GTAC 1 cut(s) 185
RsaNI GTAC 1 cut(s) 184
RseI CAYNNNNRTG 1 cut(s) 543
SacI GAGCTC 1 cut(s) 483
SalI GTCGAC 1 cut(s) 527
SatI GCNGC 7 cut(s) 190, 195, 286, 289, 466, 510, 941
Sau3AI GATC 7 cut(s) 36, 297, 378, 429, 898, 959, 969
Sau96I GGNCC 4 cut(s) 277, 782, 800, 929
SchI GAGTC 1 cut(s) 453
ScrFI CCNGG 7 cut(s) 146, 162, 218, 437, 812, 830, 887
SduI GDGCHC 2 cut(s) 483, 810
SfcI CTRYAG 1 cut(s) 678
SfoI GGCGCC 1 cut(s) 193
Sfr274I CTCGAG 1 cut(s) 293
SinI GGWCC 2 cut(s) 277, 929
SlaI CTCGAG 1 cut(s) 293
SmiMI CAYNNNNRTG 1 cut(s) 543
SmlI CTYRAG 2 cut(s) 293, 311
SmoI CTYRAG 2 cut(s) 293, 311
Sse9I AATT 2 cut(s) 696, 954
SspDI GGCGCC 1 cut(s) 191
SspMI CTAG 1 cut(s) 994
SstI GAGCTC 1 cut(s) 483
StyD4I CCNGG 7 cut(s) 144, 160, 216, 435, 810, 828, 885
StyI CCWWGG 2 cut(s) 372, 387
TaaI ACNGT 2 cut(s) 226, 644
TaqI TCGA 6 cut(s) 294, 327, 528, 686, 877, 949
TasI AATT 2 cut(s) 696, 954
TauI GCSGC 6 cut(s) 192, 197, 288, 291, 468, 512
TfiI GAWTC 1 cut(s) 794
TseFI GTSAC 1 cut(s) 355
TseI GCWGC 1 cut(s) 940
Tsp45I GTSAC 1 cut(s) 355
TspDTI ATGAA 1 cut(s) 215
TspGWI ACGGA 1 cut(s) 341
Tth111I GACNNNGTC 1 cut(s) 239
VpaK11BI GGWCC 2 cut(s) 277, 929
XceI RCATGY 1 cut(s) 947
XhoI CTCGAG 1 cut(s) 293
XmiI GTMKAC 1 cut(s) 528
XspI CTAG 1 cut(s) 994
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.