RchiOBHm_Chr6g0312541

Acetylglutamate kinase

Basic Information

Type: gene
Biological Identity
rosa_chinensis
6
Physical Location & Seq
Forward (+)
69128354 .. 69129785
1432 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ28116

Sequence Viewer

Length: 993 bp
ATGTTGGCTTCTAAAACCCACCCTTGTCCATCTCTGATCTCATTCCCTCCTTCCCCAAAACCCCGCAACCTCACCTTCTTCCGCCCCAAATGTCCACCGCACTCGCTCTCAATCAAAGCCCAACACCCGGCTCATACCACTCCGGGTCAGCTCCGGGTCGACATTCTCTCCGAATCCCTACCCTTCATCCAGAAATTCCGAGGCAAAACCATCGTCGTCAAGTACGGCGGCGCCGCCATGAAGGACGAGACCCTCCAGGCCACCGTCGTCAGAGACCTCGTCCTCCTCGCCTGCGTCGGCCTCCGCCCCATCTTGGTCCACGGCGGCGGCCCCGAGATCAACCTCTGGCTCAAGCGCCTCAACATCGAGGTCAACTTCCACGACGGCCTCCGTGTCACCGACGCGCCCACCATGGAGATCGTCTCCATGGTCTTGGCCGGCAAAGTCAACAAGCATTTGGTCTCCCTGATCAACCGGGAAGGAGTCAAGGCCATCGGCCTCTGCGGCTCCGACGGCGAGCTCATCACCGCCCGCCCCGCCCCCAACGCCGCCAAGTTAGGGTATGTCGGCGAGGTGGCGCGCGTGGACCCCGCAATTCTCCGGTCTATCGTGGACGACGGCCACATTCCGGTGATTGCGTCGGTGGCGTCGGACGGGTCCGGTCAGCAGTACAACATCAATGCGGACACGGTGGCGGGGGAGATCTCGGCGGCGCTGGGGGCGGAGAAGCTGATCCTGCTGACTGATGTGGCCGGAATTCTGGAGGACCGAGAGGATCCGAGTAGCTTGGTGAAGGAGATTGACATCAAGGGAGTGAAGAAGATGATGGAGGATGGGCAAATCGGAGGTGGGATGATTCCCAAGGTGAGTTGCTGCGTCAGGTCATTAGCTCAGGGAGTGAGGACTGCTAGTATTATTGATGGCCGGAAACCCCATTCTTTGTTGCTTGAGGTTTTGACTGATGAAGGAGCTGGGACTATGATCACTGGCTAA

Protein Analysis

330

Amino Acids

35.04

Weight (kDa)

8.18

Isoelectric Point (pI)

39.22

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
AA_kinase PF00696 69 - 307 2.8e-46 Amino acid kinase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 230
AccI GTMKAC 1 cut(s) 159
AccII CGCG 3 cut(s) 404, 580, 582
AclWI GGATC 3 cut(s) 727, 770, 783
AcoI YGGCCR 4 cut(s) 435, 619, 750, 922
AcsI RAATTY 2 cut(s) 194, 756
AcyI GRCGYC 2 cut(s) 231, 647
AfaI GTAC 2 cut(s) 224, 671
AfiI CCNNNNNNNGG 4 cut(s) 127, 313, 558, 628
AjnI CCWGG 1 cut(s) 255
AluBI AGCT 6 cut(s) 151, 520, 730, 786, 890, 971
AluI AGCT 6 cut(s) 151, 520, 730, 786, 890, 971
Alw21I GWGCWC 1 cut(s) 522
Alw26I GTCTC 4 cut(s) 242, 267, 427, 466
AlwI GGATC 3 cut(s) 727, 770, 783
Ama87I CYCGRG 1 cut(s) 332
ApeKI GCWGC 1 cut(s) 873
ApoI RAATTY 2 cut(s) 194, 756
ArsI GACNNNNNNTTYG 2 cut(s) 198, 230
AspLEI GCGC 6 cut(s) 233, 357, 406, 580, 582, 715
AspS9I GGNCC 5 cut(s) 316, 329, 586, 657, 766
AsuC2I CCSGG 4 cut(s) 128, 144, 155, 476
AsuHPI GGTGA 6 cut(s) 64, 388, 517, 643, 802, 877
AvaI CYCGRG 1 cut(s) 332
AvaII GGWCC 4 cut(s) 316, 586, 657, 766
BamHI GGATCC 1 cut(s) 775
BanI GGYRCC 1 cut(s) 230
BanII GRGCYC 1 cut(s) 522
Bbv12I GWGCWC 1 cut(s) 522
BbvI GCAGC 1 cut(s) 860
BccI CCATC 7 cut(s) 37, 218, 317, 500, 820, 827, 914
BceAI ACGGC 5 cut(s) 241, 337, 400, 529, 634
BcgI CGANNNNNNTGC 2 cut(s) 193, 227
BciT130I CCWGG 1 cut(s) 257
BclI TGATCA 2 cut(s) 468, 981
BcnI CCSGG 4 cut(s) 128, 144, 155, 476
BcoDI GTCTC 4 cut(s) 242, 267, 427, 466
BfaI CTAG 1 cut(s) 909
BfoI RGCGCY 3 cut(s) 234, 358, 716
BglI GCCNNNNNGGC 1 cut(s) 504
BglII AGATCT 1 cut(s) 702
BisI GCNGC 8 cut(s) 229, 234, 325, 328, 505, 549, 711, 874
BlsI GCNGC 8 cut(s) 230, 235, 326, 329, 506, 550, 712, 875
Bme1390I CCNGG 5 cut(s) 128, 144, 155, 257, 476
Bme18I GGWCC 4 cut(s) 316, 586, 657, 766
BmeT110I CYCGRG 1 cut(s) 332
BmgT120I GGNCC 5 cut(s) 316, 329, 586, 657, 766
BmiI GGNNCC 6 cut(s) 232, 331, 508, 588, 658, 777
BmrFI CCNGG 5 cut(s) 128, 144, 155, 257, 476
BplI GAGNNNNNCTC 2 cut(s) 407, 439
BpmI CTGGAG 2 cut(s) 239, 782
Bpu10I CCTNAGC 1 cut(s) 891
BpuEI CTTGAG 2 cut(s) 335, 968
BpuMI CCSGG 4 cut(s) 128, 144, 155, 476
BsaBI GATNNNNATC 1 cut(s) 803
BsaHI GRCGYC 2 cut(s) 231, 647
BsaI GGTCTC 3 cut(s) 242, 267, 466
BsaJI CCNNGG 5 cut(s) 199, 319, 411, 426, 861
BsaWI WCCGGW 3 cut(s) 600, 628, 659
BsaXI ACNNNNNCTCC 2 cut(s) 152, 182
Bsc4I CCNNNNNNNGG 4 cut(s) 127, 313, 558, 628
Bse118I RCCGGY 1 cut(s) 437
Bse1I ACTGG 1 cut(s) 991
Bse8I GATNNNNATC 1 cut(s) 803
BseBI CCWGG 1 cut(s) 257
BseDI CCNNGG 5 cut(s) 199, 319, 411, 426, 861
BseGI GGATG 3 cut(s) 186, 838, 858
BseJI GATNNNNATC 1 cut(s) 803
BseLI CCNNNNNNNGG 4 cut(s) 127, 313, 558, 628
BseMII CTCAG 1 cut(s) 905
BseNI ACTGG 1 cut(s) 991
BsePI GCGCGC 1 cut(s) 578
BseRI GAGGAG 1 cut(s) 275
BseXI GCAGC 1 cut(s) 860
BseYI CCCAGC 2 cut(s) 715, 971
Bsh1236I CGCG 3 cut(s) 404, 580, 582
BshNI GGYRCC 1 cut(s) 230
BsiHKAI GWGCWC 1 cut(s) 522
BsiHKCI CYCGRG 1 cut(s) 332
BslFI GGGAC 1 cut(s) 988
BslI CCNNNNNNNGG 4 cut(s) 127, 313, 558, 628
BsmAI GTCTC 4 cut(s) 242, 267, 427, 466
BsmBI CGTCTC 1 cut(s) 427
BsmFI GGGAC 1 cut(s) 988
Bso31I GGTCTC 3 cut(s) 242, 267, 466
BsoBI CYCGRG 1 cut(s) 332
Bsp1286I GDGCHC 1 cut(s) 522
Bsp143I GATC 8 cut(s) 36, 336, 417, 468, 702, 732, 775, 981
Bsp19I CCATGG 2 cut(s) 411, 426
BspCNI CTCAG 1 cut(s) 904
BspFNI CGCG 3 cut(s) 404, 580, 582
BspLI GGNNCC 6 cut(s) 232, 331, 508, 588, 658, 777
BspPI GGATC 3 cut(s) 727, 770, 783
BspT107I GGYRCC 1 cut(s) 230
BspTNI GGTCTC 3 cut(s) 242, 267, 466
BsrFI RCCGGY 1 cut(s) 437
BsrI ACTGG 1 cut(s) 991
BssAI RCCGGY 1 cut(s) 437
BssECI CCNNGG 5 cut(s) 199, 319, 411, 426, 861
BssHII GCGCGC 1 cut(s) 578
BssMI GATC 8 cut(s) 36, 336, 417, 468, 702, 732, 775, 981
BssNI GRCGYC 2 cut(s) 231, 647
BssT1I CCWWGG 3 cut(s) 411, 426, 861
Bst2UI CCWGG 1 cut(s) 257
Bst4CI ACNGT 2 cut(s) 265, 691
BstACI GRCGYC 2 cut(s) 231, 647
BstC8I GCNNGC 5 cut(s) 292, 439, 518, 532, 580
BstDEI CTNAG 1 cut(s) 891
BstDSI CCRYGG 3 cut(s) 319, 411, 426
BstF5I GGATG 3 cut(s) 186, 838, 858
BstFNI CGCG 3 cut(s) 404, 580, 582
BstH2I RGCGCY 3 cut(s) 234, 358, 716
BstHHI GCGC 6 cut(s) 233, 357, 406, 580, 582, 715
BstKTI GATC 8 cut(s) 39, 339, 420, 471, 705, 735, 778, 984
BstMAI GTCTC 4 cut(s) 242, 267, 427, 466
BstMBI GATC 8 cut(s) 36, 336, 417, 468, 702, 732, 775, 981
BstMWI GCNNNNNNNGC 7 cut(s) 504, 513, 536, 545, 644, 719, 736
BstNI CCWGG 1 cut(s) 257
BstSCI CCNGG 5 cut(s) 126, 142, 153, 255, 474
BstUI CGCG 3 cut(s) 404, 580, 582
BstV1I GCAGC 1 cut(s) 860
BstX2I RGATCY 2 cut(s) 702, 775
BstXI CCANNNNNNTGG 1 cut(s) 433
BstYI RGATCY 2 cut(s) 702, 775
BtgI CCRYGG 3 cut(s) 319, 411, 426
BtsCI GGATG 3 cut(s) 186, 838, 858
BtsIMutI CAGTG 1 cut(s) 984
Cac8I GCNNGC 5 cut(s) 292, 439, 518, 532, 580
CfoI GCGC 6 cut(s) 233, 357, 406, 580, 582, 715
Cfr10I RCCGGY 1 cut(s) 437
Cfr13I GGNCC 5 cut(s) 316, 329, 586, 657, 766
CseI GACGC 5 cut(s) 283, 410, 627, 636, 865
Csp6I GTAC 2 cut(s) 223, 670
CviAII CATG 3 cut(s) 238, 412, 427
CviQI GTAC 2 cut(s) 223, 670
DdeI CTNAG 1 cut(s) 891
DinI GGCGCC 1 cut(s) 232
DpnI GATC 8 cut(s) 38, 338, 419, 470, 704, 734, 777, 983
DpnII GATC 8 cut(s) 36, 336, 417, 468, 702, 732, 775, 981
EaeI YGGCCR 4 cut(s) 435, 619, 750, 922
EciI GGCGGA 3 cut(s) 71, 293, 737
Ecl136II GAGCTC 1 cut(s) 520
Eco130I CCWWGG 3 cut(s) 411, 426, 861
Eco24I GRGCYC 1 cut(s) 522
Eco31I GGTCTC 3 cut(s) 242, 267, 466
Eco47I GGWCC 4 cut(s) 316, 586, 657, 766
Eco53kI GAGCTC 1 cut(s) 520
Eco88I CYCGRG 1 cut(s) 332
EcoICRI GAGCTC 1 cut(s) 520
EcoRI GAATTC 1 cut(s) 756
EcoRII CCWGG 1 cut(s) 255
EcoT14I CCWWGG 3 cut(s) 411, 426, 861
EcoT38I GRGCYC 1 cut(s) 522
EgeI GGCGCC 1 cut(s) 232
EheI GGCGCC 1 cut(s) 232
ErhI CCWWGG 3 cut(s) 411, 426, 861
Esp3I CGTCTC 1 cut(s) 427
FaeI CATG 3 cut(s) 241, 415, 430
FaiI YATR 6 cut(s) 135, 239, 413, 428, 564, 980
FaqI GGGAC 1 cut(s) 988
FatI CATG 3 cut(s) 237, 411, 426
FauI CCCGC 5 cut(s) 71, 539, 544, 598, 688
FbaI TGATCA 2 cut(s) 468, 981
FblI GTMKAC 1 cut(s) 159
Fnu4HI GCNGC 8 cut(s) 229, 234, 325, 328, 505, 549, 711, 874
FokI GGATG 3 cut(s) 173, 845, 865
FriOI GRGCYC 1 cut(s) 522
Fsp4HI GCNGC 8 cut(s) 229, 234, 325, 328, 505, 549, 711, 874
FspBI CTAG 1 cut(s) 909
GlaI GCGC 6 cut(s) 232, 356, 405, 579, 581, 714
GluI GCNGC 8 cut(s) 229, 234, 325, 328, 505, 549, 711, 874
GsaI CCCAGC 2 cut(s) 719, 975
GsuI CTGGAG 2 cut(s) 239, 782
HaeII RGCGCY 3 cut(s) 234, 358, 716
HgaI GACGC 5 cut(s) 283, 410, 627, 636, 865
HhaI GCGC 6 cut(s) 233, 357, 406, 580, 582, 715
Hin1I GRCGYC 2 cut(s) 231, 647
Hin1II CATG 3 cut(s) 241, 415, 430
Hin6I GCGC 6 cut(s) 231, 355, 404, 578, 580, 713
HinP1I GCGC 6 cut(s) 231, 355, 404, 578, 580, 713
HincII GTYRAC 3 cut(s) 160, 373, 448
HindII GTYRAC 3 cut(s) 160, 373, 448
HinfI GANTC 3 cut(s) 173, 483, 856
HphI GGTGA 6 cut(s) 64, 388, 517, 643, 802, 877
Hpy166II GTNNAC 7 cut(s) 95, 160, 319, 373, 448, 586, 613
Hpy188I TCNGA 8 cut(s) 36, 172, 200, 272, 511, 652, 780, 845
Hpy188III TCNNGA 2 cut(s) 190, 761
Hpy8I GTNNAC 7 cut(s) 95, 160, 319, 373, 448, 586, 613
Hpy99I CGWCG 9 cut(s) 218, 269, 299, 386, 404, 515, 620, 643, 652
HpyAV CCTTC 7 cut(s) 60, 85, 193, 235, 473, 787, 959
HpyCH4III ACNGT 2 cut(s) 265, 691
HpyF10VI GCNNNNNNNGC 7 cut(s) 504, 513, 536, 545, 644, 719, 736
HpyF3I CTNAG 1 cut(s) 891
Hsp92I GRCGYC 2 cut(s) 231, 647
Hsp92II CATG 3 cut(s) 241, 415, 430
HspAI GCGC 6 cut(s) 231, 355, 404, 578, 580, 713
KasI GGCGCC 1 cut(s) 230
KroI GCCGGC 1 cut(s) 437
KroNI GCCGGC 1 cut(s) 439
Ksp22I TGATCA 2 cut(s) 468, 981
Kzo9I GATC 8 cut(s) 36, 336, 417, 468, 702, 732, 775, 981
LmnI GCTCC 3 cut(s) 156, 512, 968
Lsp1109I GCAGC 1 cut(s) 860
MaeI CTAG 1 cut(s) 909
MaeIII GTNAC 1 cut(s) 394
MalI GATC 8 cut(s) 38, 338, 419, 470, 704, 734, 777, 983
MboI GATC 8 cut(s) 36, 336, 417, 468, 702, 732, 775, 981
MboII GAAGA 3 cut(s) 70, 829, 832
MflI RGATCY 2 cut(s) 702, 775
MhlI GDGCHC 1 cut(s) 522
MluCI AATT 3 cut(s) 194, 594, 756
Mly113I GGCGCC 1 cut(s) 231
MlyI GAGTC 1 cut(s) 492
MmeI TCCRAC 2 cut(s) 534, 630
MroNI GCCGGC 1 cut(s) 437
MslI CAYNNNNRTG 1 cut(s) 629
MspR9I CCNGG 5 cut(s) 128, 144, 155, 257, 476
MvaI CCWGG 1 cut(s) 257
MvnI CGCG 3 cut(s) 404, 580, 582
MwoI GCNNNNNNNGC 7 cut(s) 504, 513, 536, 545, 644, 719, 736
NaeI GCCGGC 1 cut(s) 439
NarI GGCGCC 1 cut(s) 231
NciI CCSGG 4 cut(s) 128, 144, 155, 476
NcoI CCATGG 2 cut(s) 411, 426
NdeII GATC 8 cut(s) 36, 336, 417, 468, 702, 732, 775, 981
NgoMIV GCCGGC 1 cut(s) 437
NlaIII CATG 3 cut(s) 241, 415, 430
NlaIV GGNNCC 6 cut(s) 232, 331, 508, 588, 658, 777
NmeAIII GCCGAG 1 cut(s) 686
NmuCI GTSAC 1 cut(s) 394
PauI GCGCGC 1 cut(s) 578
PdiI GCCGGC 1 cut(s) 439
PfeI GAWTC 2 cut(s) 173, 856
PflFI GACNNNGTC 1 cut(s) 278
PkrI GCNGC 8 cut(s) 230, 235, 326, 329, 506, 550, 712, 875
PleI GAGTC 1 cut(s) 491
PluTI GGCGCC 1 cut(s) 234
PpsI GAGTC 1 cut(s) 491
Psp124BI GAGCTC 1 cut(s) 522
Psp6I CCWGG 1 cut(s) 255
PspFI CCCAGC 2 cut(s) 715, 971
PspGI CCWGG 1 cut(s) 255
PspN4I GGNNCC 6 cut(s) 232, 331, 508, 588, 658, 777
PspPI GGNCC 5 cut(s) 316, 329, 586, 657, 766
PsuI RGATCY 2 cut(s) 702, 775
PsyI GACNNNGTC 1 cut(s) 278
PteI GCGCGC 1 cut(s) 578
RsaI GTAC 2 cut(s) 224, 671
RsaNI GTAC 2 cut(s) 223, 670
RseI CAYNNNNRTG 1 cut(s) 629
SacI GAGCTC 1 cut(s) 522
SalI GTCGAC 1 cut(s) 158
SatI GCNGC 8 cut(s) 229, 234, 325, 328, 505, 549, 711, 874
Sau3AI GATC 8 cut(s) 36, 336, 417, 468, 702, 732, 775, 981
Sau96I GGNCC 5 cut(s) 316, 329, 586, 657, 766
SchI GAGTC 1 cut(s) 492
ScrFI CCNGG 5 cut(s) 128, 144, 155, 257, 476
SduI GDGCHC 1 cut(s) 522
SfoI GGCGCC 1 cut(s) 232
SinI GGWCC 4 cut(s) 316, 586, 657, 766
SmiMI CAYNNNNRTG 1 cut(s) 629
SmlI CTYRAG 2 cut(s) 350, 947
SmoI CTYRAG 2 cut(s) 350, 947
Sse9I AATT 3 cut(s) 194, 594, 756
SspDI GGCGCC 1 cut(s) 230
SspMI CTAG 1 cut(s) 909
SstI GAGCTC 1 cut(s) 522
StyD4I CCNGG 5 cut(s) 126, 142, 153, 255, 474
StyI CCWWGG 3 cut(s) 411, 426, 861
TaaI ACNGT 2 cut(s) 265, 691
TaqI TCGA 2 cut(s) 159, 366
TaqII GACCGA 1 cut(s) 783
TasI AATT 3 cut(s) 194, 594, 756
TatI WGTACW 1 cut(s) 669
TauI GCSGC 7 cut(s) 231, 236, 327, 330, 507, 551, 713
TfiI GAWTC 2 cut(s) 173, 856
TscAI CASTG 1 cut(s) 991
TseFI GTSAC 1 cut(s) 394
TseI GCWGC 1 cut(s) 873
Tsp45I GTSAC 1 cut(s) 394
TspDTI ATGAA 3 cut(s) 175, 254, 978
TspGWI ACGGA 1 cut(s) 380
TspRI CASTG 1 cut(s) 991
Tth111I GACNNNGTC 1 cut(s) 278
VpaK11BI GGWCC 4 cut(s) 316, 586, 657, 766
XapI RAATTY 2 cut(s) 194, 756
XmiI GTMKAC 1 cut(s) 159
XspI CTAG 1 cut(s) 909
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.