MD08G1134500.v1.1

Acetylglutamate kinase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr08
Physical Location & Seq
Forward (+)
12798639 .. 12799628
990 bp
Loading structure...
UTR
Exon/CDS
Intron
MD08G1134500.v1.1.491

Sequence Viewer

Length: 990 bp
ATGTTGGCAGCTAAAACCCTAATAAACCCATCGCCATCACTCAAGCTCCCAAACAACCTCTCCCTCCGCCGCAAACCCCCATTTTCTCTCTCGATCCGCAACTCTCTCTCCCAATCCCCGTCGTCTCCTGATCCCACTCCGGGGCAACTTCGAGTCGACATCCTCGCCGAGTCTCTCCCCTTCATCCAGAAATTCCGAGGCAAGACCATCGTCGTCAAGTATGGCGGCGCCGCCATGAAATCCGAGTCCCTCCAGGCCTCCGTCGTCAACGACCTCGTCCTCCTCTCCTGCGTCGGCCTCAGGCCTATCCTCGTCCACGGCGGCGGCCCCGAGATCAACCTCTTGCTCCGGCGCCTCGGCATCGAGGCGACCTTCGTCGACGGCCTCCGAGTCACCGACGCCAAAACAATGGAGGTCGTATCGATGGTCCTTGTAGGGAAAGTCAACAAAAATCTGGTCTCCTTAATCGACCGGGCCGGCGCCAAGGCAATCGGACTCTGCGGGATGGACGGGCGGCTTGTCACGGCCCGGCCCGTTCCGAACGCCGCCAAATTGGGATTTGTAGGGGAAGTTGCGAGGGTGGACCCCGCCGTGTTGCGGTCCAACGTCGAGGCAGGGTACATCCCGGTGATTGCGTCCGTGGCGGCGGACGAGACCGGGCAGCAGTATAACATCAATGCGGACACGGTGGCGGGGGAGCTGGCGGCGGCGGTGGGGGCGGAGAAGCTGATCCTGCTGACCGACGTGGCGGGGATTCTGGAGGATCGAAACGACGTGTCGAGTTTGGTAAAGGAGATTGATATCAATGGAGTGAAGAAGATGGTGGCGGAGGGGAAGATCGGCGGCGGAATGATTCCGAAGGTGAGTTGCTGCGTGAGGTCGCTGGCGCAGGGTGTGAAGACTGCTAGCATTGTTGATGGGAGAGTGCCCCATTCTCTGTTGCTTGAGATTTTGACTGATGAAGGGGCTGGAACTATGATTACTGGATGA

Protein Analysis

330

Amino Acids

34.4

Weight (kDa)

9.0

Isoelectric Point (pI)

40.02

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
AA_kinase PF00696 68 - 306 1.9e-45 Amino acid kinase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 3 cut(s) 227, 351, 479
AccI GTMKAC 2 cut(s) 156, 378
AclWI GGATC 4 cut(s) 88, 125, 724, 771
AcsI RAATTY 1 cut(s) 191
AcyI GRCGYC 4 cut(s) 228, 352, 399, 480
AfaI GTAC 1 cut(s) 620
AfiI CCNNNNNNNGG 3 cut(s) 140, 141, 597
AflIII ACRYGT 1 cut(s) 774
AjiI CACGTC 2 cut(s) 745, 775
AjnI CCWGG 1 cut(s) 252
AluBI AGCT 4 cut(s) 11, 46, 700, 727
AluI AGCT 4 cut(s) 11, 46, 700, 727
Alw26I GTCTC 4 cut(s) 129, 177, 463, 647
AlwI GGATC 4 cut(s) 88, 125, 724, 771
Ama87I CYCGRG 1 cut(s) 329
AoxI GGCC 8 cut(s) 255, 295, 302, 325, 382, 474, 525, 530
ApeKI GCWGC 3 cut(s) 8, 661, 870
ApoI RAATTY 1 cut(s) 191
ArsI GACNNNNNNTTYG 2 cut(s) 441, 473
AspLEI GCGC 4 cut(s) 230, 354, 482, 889
AspS9I GGNCC 7 cut(s) 326, 427, 474, 526, 531, 583, 600
AsuC2I CCSGG 5 cut(s) 141, 473, 529, 626, 658
AsuHPI GGTGA 3 cut(s) 385, 640, 874
AsuNHI GCTAGC 1 cut(s) 905
AvaI CYCGRG 1 cut(s) 329
AvaII GGWCC 3 cut(s) 427, 583, 600
AxyI CCTNAGG 1 cut(s) 299
BaeGI GKGCMC 1 cut(s) 930
BanI GGYRCC 3 cut(s) 227, 351, 479
BbsI GAAGAC 1 cut(s) 905
BbvI GCAGC 3 cut(s) 20, 673, 857
BccI CCATC 7 cut(s) 37, 43, 215, 418, 499, 814, 911
BceAI ACGGC 4 cut(s) 334, 397, 540, 575
BcgI CGANNNNNNTGC 2 cut(s) 190, 224
BciT130I CCWGG 1 cut(s) 254
BcnI CCSGG 5 cut(s) 141, 473, 529, 626, 658
BcoDI GTCTC 4 cut(s) 129, 177, 463, 647
BfaI CTAG 1 cut(s) 906
BfoI RGCGCY 3 cut(s) 231, 355, 483
Bme1390I CCNGG 6 cut(s) 141, 254, 473, 529, 626, 658
Bme18I GGWCC 3 cut(s) 427, 583, 600
BmeT110I CYCGRG 1 cut(s) 329
BmgBI CACGTC 2 cut(s) 745, 775
BmgT120I GGNCC 7 cut(s) 326, 427, 474, 526, 531, 583, 600
BmiI GGNNCC 5 cut(s) 229, 328, 353, 481, 585
BmrFI CCNGG 6 cut(s) 141, 254, 473, 529, 626, 658
BmsI GCATC 1 cut(s) 369
BmtI GCTAGC 1 cut(s) 909
BoxI GACNNNNGTC 2 cut(s) 209, 374
BpiI GAAGAC 1 cut(s) 905
BpmI CTGGAG 2 cut(s) 236, 779
BpuEI CTTGAG 2 cut(s) 26, 965
BpuMI CCSGG 5 cut(s) 141, 473, 529, 626, 658
Bsa29I ATCGAT 1 cut(s) 422
BsaBI GATNNNNATC 1 cut(s) 800
BsaHI GRCGYC 4 cut(s) 228, 352, 399, 480
BsaI GGTCTC 2 cut(s) 463, 647
BsaJI CCNNGG 6 cut(s) 140, 196, 316, 355, 483, 639
BsaXI ACNNNNNCTCC 6 cut(s) 30, 44, 60, 74, 92, 122
Bsc4I CCNNNNNNNGG 3 cut(s) 140, 141, 597
Bse118I RCCGGY 1 cut(s) 476
Bse1I ACTGG 1 cut(s) 988
Bse21I CCTNAGG 1 cut(s) 299
Bse8I GATNNNNATC 1 cut(s) 800
BseBI CCWGG 1 cut(s) 254
BseCI ATCGAT 1 cut(s) 422
BseDI CCNNGG 6 cut(s) 140, 196, 316, 355, 483, 639
BseGI GGATG 4 cut(s) 159, 183, 510, 621
BseJI GATNNNNATC 1 cut(s) 800
BseLI CCNNNNNNNGG 3 cut(s) 140, 141, 597
BseMII CTCAG 1 cut(s) 313
BseNI ACTGG 1 cut(s) 988
BseRI GAGGAG 1 cut(s) 272
BseSI GKGCMC 1 cut(s) 930
BseXI GCAGC 3 cut(s) 20, 673, 857
Bsh1285I CGRYCG 1 cut(s) 472
BshFI GGCC 8 cut(s) 257, 297, 304, 327, 384, 476, 527, 532
BshNI GGYRCC 3 cut(s) 227, 351, 479
BshVI ATCGAT 1 cut(s) 422
BsiEI CGRYCG 1 cut(s) 472
BsiHKCI CYCGRG 1 cut(s) 329
BsiSI CCGG 7 cut(s) 140, 349, 472, 477, 529, 626, 657
BslFI GGGAC 1 cut(s) 232
BslI CCNNNNNNNGG 3 cut(s) 140, 141, 597
BsmAI GTCTC 4 cut(s) 129, 177, 463, 647
BsmBI CGTCTC 1 cut(s) 129
BsmFI GGGAC 1 cut(s) 232
BsnI GGCC 8 cut(s) 257, 297, 304, 327, 384, 476, 527, 532
Bso31I GGTCTC 2 cut(s) 463, 647
BsoBI CYCGRG 1 cut(s) 329
Bsp1286I GDGCHC 1 cut(s) 930
Bsp143I GATC 6 cut(s) 93, 130, 333, 729, 763, 837
BspANI GGCC 8 cut(s) 257, 297, 304, 327, 384, 476, 527, 532
BspCNI CTCAG 1 cut(s) 312
BspDI ATCGAT 1 cut(s) 422
BspLI GGNNCC 5 cut(s) 229, 328, 353, 481, 585
BspOI GCTAGC 1 cut(s) 909
BspPI GGATC 4 cut(s) 88, 125, 724, 771
BspT107I GGYRCC 3 cut(s) 227, 351, 479
BspTNI GGTCTC 2 cut(s) 463, 647
BsrFI RCCGGY 1 cut(s) 476
BsrI ACTGG 1 cut(s) 988
BssAI RCCGGY 1 cut(s) 476
BssECI CCNNGG 6 cut(s) 140, 196, 316, 355, 483, 639
BssMI GATC 6 cut(s) 93, 130, 333, 729, 763, 837
BssNI GRCGYC 4 cut(s) 228, 352, 399, 480
BssT1I CCWWGG 1 cut(s) 483
Bst2UI CCWGG 1 cut(s) 254
Bst4CI ACNGT 1 cut(s) 688
BstACI GRCGYC 4 cut(s) 228, 352, 399, 480
BstC8I GCNNGC 4 cut(s) 478, 702, 885, 907
BstDEI CTNAG 1 cut(s) 299
BstDSI CCRYGG 2 cut(s) 316, 639
BstF5I GGATG 4 cut(s) 159, 183, 510, 621
BstH2I RGCGCY 3 cut(s) 231, 355, 483
BstHHI GCGC 4 cut(s) 230, 354, 482, 889
BstKTI GATC 6 cut(s) 96, 133, 336, 732, 766, 840
BstMAI GTCTC 4 cut(s) 129, 177, 463, 647
BstMBI GATC 6 cut(s) 93, 130, 333, 729, 763, 837
BstMCI CGRYCG 1 cut(s) 472
BstMWI GCNNNNNNNGC 3 cut(s) 641, 716, 733
BstNI CCWGG 1 cut(s) 254
BstPAI GACNNNNGTC 2 cut(s) 209, 374
BstSCI CCNGG 6 cut(s) 139, 252, 471, 527, 624, 656
BstSLI GKGCMC 1 cut(s) 930
BstV1I GCAGC 3 cut(s) 20, 673, 857
BstV2I GAAGAC 1 cut(s) 905
BstXI CCANNNNNNTGG 1 cut(s) 409
Bsu15I ATCGAT 1 cut(s) 422
Bsu36I CCTNAGG 1 cut(s) 299
BsuRI GGCC 8 cut(s) 257, 297, 304, 327, 384, 476, 527, 532
BsuTUI ATCGAT 1 cut(s) 422
BtgI CCRYGG 2 cut(s) 316, 639
BtgZI GCGATG 1 cut(s) 15
BtrI CACGTC 2 cut(s) 745, 775
BtsCI GGATG 4 cut(s) 159, 183, 510, 621
Cac8I GCNNGC 4 cut(s) 478, 702, 885, 907
CfoI GCGC 4 cut(s) 230, 354, 482, 889
Cfr10I RCCGGY 1 cut(s) 476
Cfr13I GGNCC 7 cut(s) 326, 427, 474, 526, 531, 583, 600
ClaI ATCGAT 1 cut(s) 422
CseI GACGC 3 cut(s) 280, 407, 624
Csp6I GTAC 1 cut(s) 619
CviAII CATG 1 cut(s) 235
CviQI GTAC 1 cut(s) 619
DdeI CTNAG 1 cut(s) 299
DinI GGCGCC 3 cut(s) 229, 353, 481
DpnI GATC 6 cut(s) 95, 132, 335, 731, 765, 839
DpnII GATC 6 cut(s) 93, 130, 333, 729, 763, 837
EciI GGCGGA 5 cut(s) 56, 662, 734, 842, 861
Eco130I CCWWGG 1 cut(s) 483
Eco147I AGGCCT 2 cut(s) 257, 304
Eco31I GGTCTC 2 cut(s) 463, 647
Eco32I GATATC 1 cut(s) 802
Eco47I GGWCC 3 cut(s) 427, 583, 600
Eco81I CCTNAGG 1 cut(s) 299
Eco88I CYCGRG 1 cut(s) 329
EcoRII CCWGG 1 cut(s) 252
EcoRV GATATC 1 cut(s) 802
EcoT14I CCWWGG 1 cut(s) 483
EgeI GGCGCC 3 cut(s) 229, 353, 481
EheI GGCGCC 3 cut(s) 229, 353, 481
ErhI CCWWGG 1 cut(s) 483
Esp3I CGTCTC 1 cut(s) 129
FaeI CATG 1 cut(s) 238
FaiI YATR 4 cut(s) 222, 236, 669, 977
FaqI GGGAC 1 cut(s) 232
FatI CATG 1 cut(s) 234
FauI CCCGC 4 cut(s) 494, 595, 685, 742
FblI GTMKAC 2 cut(s) 156, 378
FokI GGATG 4 cut(s) 146, 170, 517, 608
FspBI CTAG 1 cut(s) 906
GlaI GCGC 4 cut(s) 229, 353, 481, 888
GsuI CTGGAG 2 cut(s) 236, 779
HaeII RGCGCY 3 cut(s) 231, 355, 483
HaeIII GGCC 8 cut(s) 257, 297, 304, 327, 384, 476, 527, 532
HapII CCGG 7 cut(s) 140, 349, 472, 477, 529, 626, 657
HgaI GACGC 3 cut(s) 280, 407, 624
HhaI GCGC 4 cut(s) 230, 354, 482, 889
Hin1I GRCGYC 4 cut(s) 228, 352, 399, 480
Hin1II CATG 1 cut(s) 238
Hin6I GCGC 4 cut(s) 228, 352, 480, 887
HinP1I GCGC 4 cut(s) 228, 352, 480, 887
HincII GTYRAC 4 cut(s) 157, 268, 379, 445
HindII GTYRAC 4 cut(s) 157, 268, 379, 445
HinfI GANTC 7 cut(s) 153, 170, 245, 390, 495, 754, 853
HpaII CCGG 7 cut(s) 140, 349, 472, 477, 529, 626, 657
HphI GGTGA 3 cut(s) 385, 640, 874
Hpy166II GTNNAC 6 cut(s) 157, 268, 316, 379, 445, 583
Hpy188I TCNGA 6 cut(s) 197, 244, 389, 494, 540, 858
Hpy188III TCNNGA 4 cut(s) 91, 128, 187, 758
Hpy8I GTNNAC 6 cut(s) 157, 268, 316, 379, 445, 583
HpyAV CCTTC 4 cut(s) 190, 382, 853, 956
HpyCH4III ACNGT 1 cut(s) 688
HpyCH4IV ACGT 3 cut(s) 606, 744, 774
HpyF10VI GCNNNNNNNGC 3 cut(s) 641, 716, 733
HpyF3I CTNAG 1 cut(s) 299
HpySE526I ACGT 3 cut(s) 606, 744, 774
Hsp92I GRCGYC 4 cut(s) 228, 352, 399, 480
Hsp92II CATG 1 cut(s) 238
HspAI GCGC 4 cut(s) 228, 352, 480, 887
KasI GGCGCC 3 cut(s) 227, 351, 479
KroI GCCGGC 1 cut(s) 476
KroNI GCCGGC 1 cut(s) 478
Kzo9I GATC 6 cut(s) 93, 130, 333, 729, 763, 837
LmnI GCTCC 3 cut(s) 51, 351, 697
Lsp1109I GCAGC 3 cut(s) 20, 673, 857
LweI GCATC 1 cut(s) 369
MaeI CTAG 1 cut(s) 906
MaeII ACGT 3 cut(s) 606, 744, 774
MaeIII GTNAC 2 cut(s) 391, 520
MalI GATC 6 cut(s) 95, 132, 335, 731, 765, 839
MboI GATC 6 cut(s) 93, 130, 333, 729, 763, 837
MboII GAAGA 4 cut(s) 826, 829, 847, 910
MhlI GDGCHC 1 cut(s) 930
MluCI AATT 2 cut(s) 191, 551
Mly113I GGCGCC 3 cut(s) 228, 352, 480
MlyI GAGTC 5 cut(s) 162, 179, 254, 399, 489
MmeI TCCRAC 1 cut(s) 627
MroNI GCCGGC 1 cut(s) 476
MseI TTAA 1 cut(s) 464
MslI CAYNNNNRTG 1 cut(s) 626
MspI CCGG 7 cut(s) 140, 349, 472, 477, 529, 626, 657
MspR9I CCNGG 6 cut(s) 141, 254, 473, 529, 626, 658
MvaI CCWGG 1 cut(s) 254
MwoI GCNNNNNNNGC 3 cut(s) 641, 716, 733
NaeI GCCGGC 1 cut(s) 478
NarI GGCGCC 3 cut(s) 228, 352, 480
NciI CCSGG 5 cut(s) 141, 473, 529, 626, 658
NdeII GATC 6 cut(s) 93, 130, 333, 729, 763, 837
NgoMIV GCCGGC 1 cut(s) 476
NheI GCTAGC 1 cut(s) 905
NlaIII CATG 1 cut(s) 238
NlaIV GGNNCC 5 cut(s) 229, 328, 353, 481, 585
NmeAIII GCCGAG 2 cut(s) 193, 336
NmuCI GTSAC 2 cut(s) 391, 520
PceI AGGCCT 2 cut(s) 257, 304
PdiI GCCGGC 1 cut(s) 478
PfeI GAWTC 2 cut(s) 754, 853
PflFI GACNNNGTC 1 cut(s) 275
PleI GAGTC 5 cut(s) 161, 178, 253, 398, 489
PluTI GGCGCC 3 cut(s) 231, 355, 483
PpsI GAGTC 5 cut(s) 161, 178, 253, 398, 489
PshAI GACNNNNGTC 2 cut(s) 209, 374
Psp6I CCWGG 1 cut(s) 252
PspGI CCWGG 1 cut(s) 252
PspN4I GGNNCC 5 cut(s) 229, 328, 353, 481, 585
PspPI GGNCC 7 cut(s) 326, 427, 474, 526, 531, 583, 600
PsrI GAACNNNNNNTAC 1 cut(s) 964
PsyI GACNNNGTC 1 cut(s) 275
RsaI GTAC 1 cut(s) 620
RsaNI GTAC 1 cut(s) 619
RseI CAYNNNNRTG 1 cut(s) 626
SalI GTCGAC 2 cut(s) 155, 377
SaqAI TTAA 1 cut(s) 464
Sau3AI GATC 6 cut(s) 93, 130, 333, 729, 763, 837
Sau96I GGNCC 7 cut(s) 326, 427, 474, 526, 531, 583, 600
SchI GAGTC 5 cut(s) 162, 179, 254, 399, 489
ScrFI CCNGG 6 cut(s) 141, 254, 473, 529, 626, 658
SduI GDGCHC 1 cut(s) 930
SfaNI GCATC 1 cut(s) 369
SfoI GGCGCC 3 cut(s) 229, 353, 481
SgrDI CGTCGACG 1 cut(s) 377
SinI GGWCC 3 cut(s) 427, 583, 600
SmiMI CAYNNNNRTG 1 cut(s) 626
SmlI CTYRAG 2 cut(s) 41, 944
SmoI CTYRAG 2 cut(s) 41, 944
Sse9I AATT 2 cut(s) 191, 551
SseBI AGGCCT 2 cut(s) 257, 304
SspDI GGCGCC 3 cut(s) 227, 351, 479
SspMI CTAG 1 cut(s) 906
StuI AGGCCT 2 cut(s) 257, 304
StyD4I CCNGG 6 cut(s) 139, 252, 471, 527, 624, 656
StyI CCWWGG 1 cut(s) 483
TaaI ACNGT 1 cut(s) 688
TaiI ACGT 3 cut(s) 609, 747, 777
TaqII GACCGA 1 cut(s) 755
TasI AATT 2 cut(s) 191, 551
TfiI GAWTC 2 cut(s) 754, 853
Tru1I TTAA 1 cut(s) 464
Tru9I TTAA 1 cut(s) 464
TseFI GTSAC 2 cut(s) 391, 520
TseI GCWGC 3 cut(s) 8, 661, 870
Tsp45I GTSAC 2 cut(s) 391, 520
TspDTI ATGAA 3 cut(s) 172, 251, 975
TspGWI ACGGA 2 cut(s) 250, 628
Tth111I GACNNNGTC 1 cut(s) 275
VpaK11BI GGWCC 3 cut(s) 427, 583, 600
XapI RAATTY 1 cut(s) 191
XmiI GTMKAC 2 cut(s) 156, 378
XspI CTAG 1 cut(s) 906
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.