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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G11320 |
| fragaria_vesca | FvH4_2g38110 FvH4_2g38110 FvH4_3g40530 FvH4_3g40670 FvH4_3g40670 FvH4_3g40670 FvH4_3g40670 |
| malus_domestica | MD08G1009600.v1.1 |
| prunus_persica | Prupe.1G361500_v2.0.a1 Prupe.1G361500_v2.0.a1 |
| pyrus_communis | pycom08g00810 |
| rosa_chinensis | RchiOBHm_Chr5g0073211 RchiOBHm_Chr6g0303441 |
| rosa_laevigata | RLG00000011085 RLG00000036374 |
| rosa_multiflora | Rmu_co8164096.1_g000001 Rmu_ssc0000114.1_g000051 |
| rosa_roxburghii | Rroxscaffold_1G00007980 Rroxscaffold_7G00164760 |
| rosa_rugosa | Rorug05G0422300 Rorug06G0321100 Rorug06G0321200 |
| rosa_samantha | Rh5AG479000 Rh5BG499700 Rh5CG522900 Rh5DG511800 Rh6AG435800 Rh6BG467700 Rh6CG447700 Rh6DG434400 |
| rosa_wichuraiana | Rw5G044530 Rw6G037710 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 506 |
| AciI | CCGC | 4 cut(s) | 106, 136, 293, 425 |
| AclWI | GGATC | 3 cut(s) | 538, 978, 991 |
| AcoI | YGGCCR | 1 cut(s) | 435 |
| AcuI | CTGAAG | 2 cut(s) | 742, 1125 |
| AdeI | CACNNNGTG | 1 cut(s) | 829 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 216, 267, 941, 1119, 1167, 1180 |
| AgsI | TTSAA | 6 cut(s) | 133, 392, 923, 1154, 1187, 1198 |
| AjnI | CCWGG | 4 cut(s) | 54, 939, 1179, 1231 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 1098, 1130, 1190, 1222 |
| AluBI | AGCT | 7 cut(s) | 14, 23, 38, 557, 805, 866, 951 |
| AluI | AGCT | 7 cut(s) | 14, 23, 38, 557, 805, 866, 951 |
| Alw21I | GWGCWC | 2 cut(s) | 482, 559 |
| Alw26I | GTCTC | 3 cut(s) | 327, 905, 1210 |
| AlwI | GGATC | 3 cut(s) | 538, 978, 991 |
| Ama87I | CYCGRG | 1 cut(s) | 225 |
| AoxI | GGCC | 3 cut(s) | 252, 435, 607 |
| ApeKI | GCWGC | 1 cut(s) | 753 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1175 |
| AspLEI | GCGC | 2 cut(s) | 654, 753 |
| AspS9I | GGNCC | 5 cut(s) | 83, 607, 632, 974, 1157 |
| AsuC2I | CCSGG | 1 cut(s) | 548 |
| AsuHPI | GGTGA | 4 cut(s) | 691, 815, 896, 1078 |
| AvaI | CYCGRG | 1 cut(s) | 225 |
| AvaII | GGWCC | 4 cut(s) | 83, 632, 974, 1157 |
| BaeGI | GKGCMC | 1 cut(s) | 834 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 405, 438 |
| BalI | TGGCCA | 1 cut(s) | 437 |
| BamHI | GGATCC | 1 cut(s) | 983 |
| BanII | GRGCYC | 1 cut(s) | 559 |
| BbsI | GAAGAC | 1 cut(s) | 812 |
| Bbv12I | GWGCWC | 2 cut(s) | 482, 559 |
| BbvI | GCAGC | 1 cut(s) | 740 |
| BccI | CCATC | 3 cut(s) | 670, 1113, 1250 |
| BciT130I | CCWGG | 4 cut(s) | 56, 941, 1181, 1233 |
| BclI | TGATCA | 1 cut(s) | 280 |
| BcnI | CCSGG | 1 cut(s) | 548 |
| BcoDI | GTCTC | 3 cut(s) | 327, 905, 1210 |
| BfaI | CTAG | 4 cut(s) | 491, 738, 843, 1001 |
| BfoI | RGCGCY | 1 cut(s) | 754 |
| BisI | GCNGC | 2 cut(s) | 106, 754 |
| BlsI | GCNGC | 2 cut(s) | 107, 755 |
| Bme1390I | CCNGG | 5 cut(s) | 56, 548, 941, 1181, 1233 |
| Bme18I | GGWCC | 4 cut(s) | 83, 632, 974, 1157 |
| BmeT110I | CYCGRG | 1 cut(s) | 225 |
| BmgT120I | GGNCC | 5 cut(s) | 83, 607, 632, 974, 1157 |
| BmiI | GGNNCC | 4 cut(s) | 985, 1159, 1172, 1301 |
| BmrFI | CCNGG | 5 cut(s) | 56, 548, 941, 1181, 1233 |
| BmrI | ACTGGG | 1 cut(s) | 375 |
| BmsI | GCATC | 1 cut(s) | 987 |
| BmuI | ACTGGG | 1 cut(s) | 375 |
| BpiI | GAAGAC | 1 cut(s) | 812 |
| BpuEI | CTTGAG | 1 cut(s) | 333 |
| BpuMI | CCSGG | 1 cut(s) | 548 |
| BsaJI | CCNNGG | 5 cut(s) | 54, 226, 336, 939, 940 |
| BsaWI | WCCGGW | 1 cut(s) | 980 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 216, 267, 941, 1119, 1167, 1180 |
| Bse1I | ACTGG | 5 cut(s) | 370, 438, 530, 976, 1301 |
| Bse3DI | GCAATG | 2 cut(s) | 661, 987 |
| BseBI | CCWGG | 4 cut(s) | 56, 941, 1181, 1233 |
| BseDI | CCNNGG | 5 cut(s) | 54, 226, 336, 939, 940 |
| BseGI | GGATG | 3 cut(s) | 574, 1124, 1261 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 216, 267, 941, 1119, 1167, 1180 |
| BseMI | GCAATG | 2 cut(s) | 661, 987 |
| BseMII | CTCAG | 4 cut(s) | 164, 900, 1118, 1211 |
| BseNI | ACTGG | 5 cut(s) | 370, 438, 530, 976, 1301 |
| BseSI | GKGCMC | 1 cut(s) | 834 |
| BseXI | GCAGC | 1 cut(s) | 740 |
| BshFI | GGCC | 3 cut(s) | 254, 437, 609 |
| BsiHKAI | GWGCWC | 2 cut(s) | 482, 559 |
| BsiHKCI | CYCGRG | 1 cut(s) | 225 |
| BsiSI | CCGG | 3 cut(s) | 354, 548, 981 |
| BslFI | GGGAC | 4 cut(s) | 191, 232, 1137, 1143 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 216, 267, 941, 1119, 1167, 1180 |
| BsmAI | GTCTC | 3 cut(s) | 327, 905, 1210 |
| BsmFI | GGGAC | 4 cut(s) | 191, 232, 1137, 1143 |
| BsnI | GGCC | 3 cut(s) | 254, 437, 609 |
| BsoBI | CYCGRG | 1 cut(s) | 225 |
| Bsp1286I | GDGCHC | 3 cut(s) | 482, 559, 834 |
| Bsp143I | GATC | 5 cut(s) | 280, 457, 466, 543, 983 |
| BspACI | CCGC | 4 cut(s) | 106, 136, 293, 425 |
| BspANI | GGCC | 3 cut(s) | 254, 437, 609 |
| BspCNI | CTCAG | 4 cut(s) | 165, 901, 1119, 1212 |
| BspLI | GGNNCC | 4 cut(s) | 985, 1159, 1172, 1301 |
| BspPI | GGATC | 3 cut(s) | 538, 978, 991 |
| BsrDI | GCAATG | 2 cut(s) | 661, 987 |
| BsrI | ACTGG | 5 cut(s) | 370, 438, 530, 976, 1301 |
| BssECI | CCNNGG | 5 cut(s) | 54, 226, 336, 939, 940 |
| BssMI | GATC | 5 cut(s) | 280, 457, 466, 543, 983 |
| BssNAI | GTATAC | 1 cut(s) | 507 |
| Bst1107I | GTATAC | 1 cut(s) | 507 |
| Bst2UI | CCWGG | 4 cut(s) | 56, 941, 1181, 1233 |
| Bst4CI | ACNGT | 5 cut(s) | 262, 714, 919, 1090, 1166 |
| Bst6I | CTCTTC | 1 cut(s) | 645 |
| BstC8I | GCNNGC | 2 cut(s) | 256, 482 |
| BstDEI | CTNAG | 4 cut(s) | 173, 909, 1127, 1220 |
| BstF5I | GGATG | 3 cut(s) | 574, 1124, 1261 |
| BstH2I | RGCGCY | 1 cut(s) | 754 |
| BstHHI | GCGC | 2 cut(s) | 654, 753 |
| BstKTI | GATC | 5 cut(s) | 283, 460, 469, 546, 986 |
| BstMAI | GTCTC | 3 cut(s) | 327, 905, 1210 |
| BstMBI | GATC | 5 cut(s) | 280, 457, 466, 543, 983 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 20, 500, 509, 707, 759 |
| BstNI | CCWGG | 4 cut(s) | 56, 941, 1181, 1233 |
| BstNSI | RCATGY | 1 cut(s) | 854 |
| BstSCI | CCNGG | 5 cut(s) | 54, 546, 939, 1179, 1231 |
| BstSLI | GKGCMC | 1 cut(s) | 834 |
| BstV1I | GCAGC | 1 cut(s) | 740 |
| BstV2I | GAAGAC | 1 cut(s) | 812 |
| BstX2I | RGATCY | 1 cut(s) | 983 |
| BstYI | RGATCY | 1 cut(s) | 983 |
| BstZ17I | GTATAC | 1 cut(s) | 507 |
| BsuRI | GGCC | 3 cut(s) | 254, 437, 609 |
| BtsCI | GGATG | 3 cut(s) | 574, 1124, 1261 |
| BtsIMutI | CAGTG | 2 cut(s) | 391, 445 |
| Cac8I | GCNNGC | 2 cut(s) | 256, 482 |
| CfoI | GCGC | 2 cut(s) | 654, 753 |
| Cfr13I | GGNCC | 5 cut(s) | 83, 607, 632, 974, 1157 |
| CviAII | CATG | 3 cut(s) | 304, 851, 860 |
| DdeI | CTNAG | 4 cut(s) | 173, 909, 1127, 1220 |
| DpnI | GATC | 5 cut(s) | 282, 459, 468, 545, 985 |
| DpnII | GATC | 5 cut(s) | 280, 457, 466, 543, 983 |
| DraI | TTTAAA | 1 cut(s) | 1134 |
| DraIII | CACNNNGTG | 1 cut(s) | 829 |
| EaeI | YGGCCR | 1 cut(s) | 435 |
| Eam1104I | CTCTTC | 1 cut(s) | 645 |
| EarI | CTCTTC | 1 cut(s) | 645 |
| EciI | GGCGGA | 1 cut(s) | 440 |
| Ecl136II | GAGCTC | 1 cut(s) | 557 |
| Eco24I | GRGCYC | 1 cut(s) | 559 |
| Eco47I | GGWCC | 4 cut(s) | 83, 632, 974, 1157 |
| Eco53kI | GAGCTC | 1 cut(s) | 557 |
| Eco57I | CTGAAG | 2 cut(s) | 742, 1125 |
| Eco88I | CYCGRG | 1 cut(s) | 225 |
| EcoICRI | GAGCTC | 1 cut(s) | 557 |
| EcoO109I | RGGNCCY | 2 cut(s) | 607, 1157 |
| EcoRII | CCWGG | 4 cut(s) | 54, 939, 1179, 1231 |
| EcoT22I | ATGCAT | 1 cut(s) | 309 |
| EcoT38I | GRGCYC | 1 cut(s) | 559 |
| FaeI | CATG | 3 cut(s) | 307, 854, 863 |
| FaqI | GGGAC | 4 cut(s) | 191, 232, 1137, 1143 |
| FatI | CATG | 3 cut(s) | 303, 850, 859 |
| FbaI | TGATCA | 1 cut(s) | 280 |
| FblI | GTMKAC | 1 cut(s) | 506 |
| Fnu4HI | GCNGC | 2 cut(s) | 106, 754 |
| FokI | GGATG | 3 cut(s) | 581, 1131, 1268 |
| FriOI | GRGCYC | 1 cut(s) | 559 |
| Fsp4HI | GCNGC | 2 cut(s) | 106, 754 |
| FspBI | CTAG | 4 cut(s) | 491, 738, 843, 1001 |
| GlaI | GCGC | 2 cut(s) | 653, 752 |
| GluI | GCNGC | 2 cut(s) | 106, 754 |
| HaeII | RGCGCY | 1 cut(s) | 754 |
| HaeIII | GGCC | 3 cut(s) | 254, 437, 609 |
| HapII | CCGG | 3 cut(s) | 354, 548, 981 |
| HhaI | GCGC | 2 cut(s) | 654, 753 |
| Hin1II | CATG | 3 cut(s) | 307, 854, 863 |
| Hin6I | GCGC | 2 cut(s) | 652, 751 |
| HinP1I | GCGC | 2 cut(s) | 652, 751 |
| HincII | GTYRAC | 2 cut(s) | 785, 969 |
| HindII | GTYRAC | 2 cut(s) | 785, 969 |
| HinfI | GANTC | 9 cut(s) | 68, 238, 320, 332, 744, 1004, 1100, 1109, 1187 |
| HpaII | CCGG | 3 cut(s) | 354, 548, 981 |
| HphI | GGTGA | 4 cut(s) | 691, 815, 896, 1078 |
| Hpy166II | GTNNAC | 3 cut(s) | 507, 785, 969 |
| Hpy188III | TCNNGA | 5 cut(s) | 225, 329, 404, 723, 1160 |
| Hpy8I | GTNNAC | 3 cut(s) | 507, 785, 969 |
| HpyAV | CCTTC | 2 cut(s) | 600, 1148 |
| HpyCH4III | ACNGT | 5 cut(s) | 262, 714, 919, 1090, 1166 |
| HpyCH4V | TGCA | 6 cut(s) | 142, 307, 512, 665, 794, 895 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 20, 500, 509, 707, 759 |
| HpyF3I | CTNAG | 4 cut(s) | 173, 909, 1127, 1220 |
| Hsp92II | CATG | 3 cut(s) | 307, 854, 863 |
| HspAI | GCGC | 2 cut(s) | 652, 751 |
| Ksp22I | TGATCA | 1 cut(s) | 280 |
| Kzo9I | GATC | 5 cut(s) | 280, 457, 466, 543, 983 |
| LmnI | GCTCC | 1 cut(s) | 554 |
| Lsp1109I | GCAGC | 1 cut(s) | 740 |
| LweI | GCATC | 1 cut(s) | 987 |
| MaeI | CTAG | 4 cut(s) | 491, 738, 843, 1001 |
| MaeIII | GTNAC | 2 cut(s) | 521, 1084 |
| MalI | GATC | 5 cut(s) | 282, 459, 468, 545, 985 |
| MboI | GATC | 5 cut(s) | 280, 457, 466, 543, 983 |
| MboII | GAAGA | 5 cut(s) | 55, 211, 632, 812, 1118 |
| MfeI | CAATTG | 2 cut(s) | 537, 666 |
| MflI | RGATCY | 1 cut(s) | 983 |
| MhlI | GDGCHC | 3 cut(s) | 482, 559, 834 |
| MlsI | TGGCCA | 1 cut(s) | 437 |
| MluCI | AATT | 3 cut(s) | 537, 666, 1011 |
| MluNI | TGGCCA | 1 cut(s) | 437 |
| MlyI | GAGTC | 5 cut(s) | 62, 247, 329, 753, 1094 |
| MmeI | TCCRAC | 2 cut(s) | 1019, 1148 |
| MnlI | CCTC | 9 cut(s) | 96, 105, 111, 168, 221, 244, 331, 648, 1028 |
| Mox20I | TGGCCA | 1 cut(s) | 437 |
| Mph1103I | ATGCAT | 1 cut(s) | 309 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1175 |
| MscI | TGGCCA | 1 cut(s) | 437 |
| MseI | TTAA | 4 cut(s) | 362, 372, 1133, 1203 |
| MslI | CAYNNNNRTG | 1 cut(s) | 312 |
| Msp20I | TGGCCA | 1 cut(s) | 437 |
| MspI | CCGG | 3 cut(s) | 354, 548, 981 |
| MspR9I | CCNGG | 5 cut(s) | 56, 548, 941, 1181, 1233 |
| MunI | CAATTG | 2 cut(s) | 537, 666 |
| MvaI | CCWGG | 4 cut(s) | 56, 941, 1181, 1233 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 20, 500, 509, 707, 759 |
| NciI | CCSGG | 1 cut(s) | 548 |
| NdeII | GATC | 5 cut(s) | 280, 457, 466, 543, 983 |
| NlaIII | CATG | 3 cut(s) | 307, 854, 863 |
| NlaIV | GGNNCC | 4 cut(s) | 985, 1159, 1172, 1301 |
| NmuCI | GTSAC | 1 cut(s) | 1084 |
| NsiI | ATGCAT | 1 cut(s) | 309 |
| NspI | RCATGY | 1 cut(s) | 854 |
| PasI | CCCWGGG | 1 cut(s) | 940 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 539 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1175 |
| PfeI | GAWTC | 4 cut(s) | 332, 1004, 1109, 1187 |
| PkrI | GCNGC | 2 cut(s) | 107, 755 |
| PleI | GAGTC | 5 cut(s) | 62, 246, 328, 752, 1094 |
| PpsI | GAGTC | 5 cut(s) | 62, 246, 328, 752, 1094 |
| PpuMI | RGGWCCY | 1 cut(s) | 1157 |
| Psp124BI | GAGCTC | 1 cut(s) | 559 |
| Psp5II | RGGWCCY | 1 cut(s) | 1157 |
| Psp6I | CCWGG | 4 cut(s) | 54, 939, 1179, 1231 |
| PspGI | CCWGG | 4 cut(s) | 54, 939, 1179, 1231 |
| PspN4I | GGNNCC | 4 cut(s) | 985, 1159, 1172, 1301 |
| PspPI | GGNCC | 5 cut(s) | 83, 607, 632, 974, 1157 |
| PspPPI | RGGWCCY | 1 cut(s) | 1157 |
| PsuI | RGATCY | 1 cut(s) | 983 |
| RseI | CAYNNNNRTG | 1 cut(s) | 312 |
| SacI | GAGCTC | 1 cut(s) | 559 |
| SaqAI | TTAA | 4 cut(s) | 362, 372, 1133, 1203 |
| SatI | GCNGC | 2 cut(s) | 106, 754 |
| Sau3AI | GATC | 5 cut(s) | 280, 457, 466, 543, 983 |
| Sau96I | GGNCC | 5 cut(s) | 83, 607, 632, 974, 1157 |
| SchI | GAGTC | 5 cut(s) | 62, 247, 329, 753, 1094 |
| ScrFI | CCNGG | 5 cut(s) | 56, 548, 941, 1181, 1233 |
| SduI | GDGCHC | 3 cut(s) | 482, 559, 834 |
| SfaNI | GCATC | 1 cut(s) | 987 |
| SinI | GGWCC | 4 cut(s) | 83, 632, 974, 1157 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 312 |
| SmlI | CTYRAG | 1 cut(s) | 348 |
| SmoI | CTYRAG | 1 cut(s) | 348 |
| Sse9I | AATT | 3 cut(s) | 537, 666, 1011 |
| SsiI | CCGC | 4 cut(s) | 106, 136, 293, 425 |
| SspI | AATATT | 1 cut(s) | 360 |
| SspMI | CTAG | 4 cut(s) | 491, 738, 843, 1001 |
| SstI | GAGCTC | 1 cut(s) | 559 |
| StyD4I | CCNGG | 5 cut(s) | 54, 546, 939, 1179, 1231 |
| TaaI | ACNGT | 5 cut(s) | 262, 714, 919, 1090, 1166 |
| TaqI | TCGA | 1 cut(s) | 66 |
| TasI | AATT | 3 cut(s) | 537, 666, 1011 |
| TauI | GCSGC | 1 cut(s) | 108 |
| TfiI | GAWTC | 4 cut(s) | 332, 1004, 1109, 1187 |
| Tru1I | TTAA | 4 cut(s) | 362, 372, 1133, 1203 |
| Tru9I | TTAA | 4 cut(s) | 362, 372, 1133, 1203 |
| TscAI | CASTG | 2 cut(s) | 391, 445 |
| TseFI | GTSAC | 1 cut(s) | 1084 |
| TseI | GCWGC | 1 cut(s) | 753 |
| Tsp45I | GTSAC | 1 cut(s) | 1084 |
| TspDTI | ATGAA | 5 cut(s) | 182, 292, 612, 693, 1064 |
| TspRI | CASTG | 2 cut(s) | 391, 445 |
| VpaK11BI | GGWCC | 4 cut(s) | 83, 632, 974, 1157 |
| XceI | RCATGY | 1 cut(s) | 854 |
| XmiI | GTMKAC | 1 cut(s) | 506 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1175 |
| XspI | CTAG | 4 cut(s) | 491, 738, 843, 1001 |
| Zsp2I | ATGCAT | 1 cut(s) | 309 |