pycom08g00810

No description available

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr8
Physical Location & Seq
Reverse (-)
622774 .. 624927
2154 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom08g00810.3

Sequence Viewer

Length: 1338 bp
ATGGTAACCGTAGATTTTGTTGCAGACAAGATACGAGGTTTCACGAAATCGACCCAGGAGATGTTCGACAGCCTCGTTCATGGACGCCCTCGGCCTTCAGCTCGTCGACATCCGATTGAAATATTGAAGCGGTTGCAACGAGAAGCGTTTTCGGATTTGATGAGACTGAGGGATAGACAAGATAAGGTTGAGAGAATGGTTTCCTTGTATGGAACATCCAGGGGAAGTCCATTCCAAGAAGCCAGCACCCTTGTAAGGGGAGAGGTTGATCTCTTGGGTGCTTTCTTATTCGTGCTTAATAGTGAAGATGAGGCTGATCACAGCTCTGATGCTCTAACTCGAGCCGGAATGAGTACTGGGGTCGATTCAAAGTTTGCTTTTGAAACTACTGTTCGGGAGAATGATACGCTTGTTGCAGAATTTGTGGCCGGTCAAAAGCACAAGAGTAGTCTTTCTGATCTTTCAGAATGCCCACTTTCTCTAGCAAAAGTTTCCTATACGGCAAATGTTAGCAACTGGTTATCTGCAATTGCAATCCCAGTGGGAGCTCGGTGCAGGGATGTTGCGGTTCTTACTAGTCCATCTCACCAGGGAAAGGGCCTTACTGATCTTTCATCATTTGGGCCACCTCTTCTAAATCAACACAATGGCAGTGCAATTGGTTTAATGGTGAAAAAATTAAATGTTGTTGCTTCATTGGCTCAGTTTGTTTCCGGACTGGCAACGCAAGCAGGTTCAGGTAGAGTTGGGCGCTGCTTGAGCACTTTTGGGCAAATTGTCTATCAACTTCCCGGAGGAACAAGGCTCTCGCTTCTTGGTTTGCACCAAATACCTAAGTTATCTAGTGAACGTGGTGAGCATAGAATTGGAGTTCTTACGATTCCTTTAAGCAGTTTGGTGCGTCACAAGCCCCCTGAGGCAACGGTTGAGGGCAGTCTGACACAGCACACCTCCCCCGAGACAATGGTTGAAGCCCTTGTTCCACCCCTAGGAACAAACTCACAGGACAATGGGTCAACTGGATCTGTTGCTCTGATGTTGGAATCAGAAATCGATGAGTTCACAAAGCTTGGGGGTTGGATTGAGATGAAGCAGTCGAATCCCAAGCATTTAGAATGGGCTGTGACCGTTGCTGATGATTCGGAAGATTCAGTTGGATGGGGAATAGGTTTAAATGGGATACTTGCAGGTCCAAACTTATGGGACCGTTTTCAGGCTGAATCGTACTTCAAATTTAACTTGGGTAAGAGGTTCAGTGTAAAGCCAGGGGTTGCATATATAAGGGATGGGAATGCCAAAATGACCGCCTTTATGCTGCGGTCAAACTGGTCTCTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

446

Amino Acids

48.39

Weight (kDa)

7.19

Isoelectric Point (pI)

33.27

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 722, 1178
AccI GTMKAC 1 cut(s) 106
AccIII TCCGGA 1 cut(s) 713
AciI CCGC 4 cut(s) 130, 566, 1305, 1318
AclWI GGATC 1 cut(s) 1030
AcoI YGGCCR 1 cut(s) 426
AcsI RAATTY 2 cut(s) 419, 1232
AcuI CTGAAG 1 cut(s) 81
AcyI GRCGYC 1 cut(s) 85
AfaI GTAC 2 cut(s) 355, 1226
AfiI CCNNNNNNNGG 5 cut(s) 255, 256, 595, 989, 1213
AgsI TTSAA 6 cut(s) 119, 127, 369, 383, 971, 1231
AhdI GACNNNNNGTC 1 cut(s) 1012
AhlI ACTAGT 1 cut(s) 575
AjnI CCWGG 4 cut(s) 54, 218, 588, 1264
AjuI GAANNNNNNNTTGG 2 cut(s) 1137, 1169
AluBI AGCT 4 cut(s) 101, 324, 548, 1069
AluI AGCT 4 cut(s) 101, 324, 548, 1069
Alw21I GWGCWC 2 cut(s) 550, 764
Alw26I GTCTC 2 cut(s) 157, 953
AlwI GGATC 1 cut(s) 1030
Ama87I CYCGRG 2 cut(s) 339, 956
Aor13HI TCCGGA 1 cut(s) 713
AoxI GGCC 4 cut(s) 92, 426, 598, 623
ApeKI GCWGC 2 cut(s) 753, 1315
ApoI RAATTY 2 cut(s) 419, 1232
Asp700I GAANNNNTTC 1 cut(s) 199
AspA2I CCTAGG 1 cut(s) 988
AspLEI GCGC 1 cut(s) 753
AspS9I GGNCC 4 cut(s) 598, 623, 1190, 1204
AsuC2I CCSGG 1 cut(s) 792
AsuHPI GGTGA 3 cut(s) 578, 682, 866
AvaI CYCGRG 2 cut(s) 339, 956
AvaII GGWCC 2 cut(s) 1190, 1204
AvrII CCTAGG 1 cut(s) 988
AxyI CCTNAGG 1 cut(s) 915
BaeI ACNNNNGTAYC 2 cut(s) 396, 429
BanII GRGCYC 1 cut(s) 550
Bbv12I GWGCWC 2 cut(s) 550, 764
BbvI GCAGC 2 cut(s) 740, 1302
BccI CCATC 3 cut(s) 589, 1152, 1280
BceAI ACGGC 1 cut(s) 516
BciT130I CCWGG 4 cut(s) 56, 220, 590, 1266
BciVI GTATCC 1 cut(s) 1173
BclI TGATCA 1 cut(s) 316
BcnI CCSGG 1 cut(s) 792
BcoDI GTCTC 2 cut(s) 157, 953
BcuI ACTAGT 1 cut(s) 575
BfaI CTAG 4 cut(s) 482, 576, 843, 989
BfoI RGCGCY 1 cut(s) 754
BfuAI ACCTGC 2 cut(s) 722, 1178
BfuI GTATCC 1 cut(s) 1173
BisI GCNGC 2 cut(s) 754, 1316
BlnI CCTAGG 1 cut(s) 988
BlsI GCNGC 2 cut(s) 755, 1317
BmcAI AGTACT 1 cut(s) 355
Bme1390I CCNGG 5 cut(s) 56, 220, 590, 792, 1266
Bme18I GGWCC 2 cut(s) 1190, 1204
BmeRI GACNNNNNGTC 1 cut(s) 1012
BmeT110I CYCGRG 2 cut(s) 339, 956
BmgT120I GGNCC 4 cut(s) 598, 623, 1190, 1204
BmiI GGNNCC 1 cut(s) 1205
BmrFI CCNGG 5 cut(s) 56, 220, 590, 792, 1266
BmrI ACTGGG 2 cut(s) 366, 533
BmsI GCATC 1 cut(s) 319
BmuI ACTGGG 2 cut(s) 366, 533
BpuEI CTTGAG 1 cut(s) 778
BpuMI CCSGG 1 cut(s) 792
Bsa29I ATCGAT 1 cut(s) 1053
BsaHI GRCGYC 1 cut(s) 85
BsaJI CCNNGG 6 cut(s) 54, 89, 219, 589, 988, 1265
BsaWI WCCGGW 1 cut(s) 713
Bsc4I CCNNNNNNNGG 5 cut(s) 255, 256, 595, 989, 1213
Bse118I RCCGGY 1 cut(s) 428
Bse1I ACTGG 6 cut(s) 361, 521, 539, 723, 1024, 1331
Bse21I CCTNAGG 1 cut(s) 915
BseAI TCCGGA 1 cut(s) 713
BseBI CCWGG 4 cut(s) 56, 220, 590, 1266
BseCI ATCGAT 1 cut(s) 1053
BseDI CCNNGG 6 cut(s) 54, 89, 219, 589, 988, 1265
BseGI GGATG 5 cut(s) 109, 215, 565, 1163, 1291
BseLI CCNNNNNNNGG 5 cut(s) 255, 256, 595, 989, 1213
BseMII CTCAG 3 cut(s) 158, 716, 906
BseNI ACTGG 6 cut(s) 361, 521, 539, 723, 1024, 1331
BseXI GCAGC 2 cut(s) 740, 1302
BsgI GTGCAG 1 cut(s) 574
BshFI GGCC 4 cut(s) 94, 428, 600, 625
BshVI ATCGAT 1 cut(s) 1053
BsiHKAI GWGCWC 2 cut(s) 550, 764
BsiHKCI CYCGRG 2 cut(s) 339, 956
BsiSI CCGG 4 cut(s) 345, 429, 714, 792
BslFI GGGAC 1 cut(s) 1217
BslI CCNNNNNNNGG 5 cut(s) 255, 256, 595, 989, 1213
BsmAI GTCTC 2 cut(s) 157, 953
BsmFI GGGAC 1 cut(s) 1217
BsmI GAATGC 2 cut(s) 473, 1297
BsnI GGCC 4 cut(s) 94, 428, 600, 625
BsoBI CYCGRG 2 cut(s) 339, 956
Bsp1286I GDGCHC 2 cut(s) 550, 764
Bsp13I TCCGGA 1 cut(s) 713
Bsp143I GATC 5 cut(s) 268, 316, 457, 607, 1022
BspACI CCGC 4 cut(s) 130, 566, 1305, 1318
BspANI GGCC 4 cut(s) 94, 428, 600, 625
BspCNI CTCAG 3 cut(s) 159, 715, 907
BspDI ATCGAT 1 cut(s) 1053
BspEI TCCGGA 1 cut(s) 713
BspLI GGNNCC 1 cut(s) 1205
BspMI ACCTGC 2 cut(s) 722, 1178
BspPI GGATC 1 cut(s) 1030
BsrFI RCCGGY 1 cut(s) 428
BsrI ACTGG 6 cut(s) 361, 521, 539, 723, 1024, 1331
BssAI RCCGGY 1 cut(s) 428
BssECI CCNNGG 6 cut(s) 54, 89, 219, 589, 988, 1265
BssMI GATC 5 cut(s) 268, 316, 457, 607, 1022
BssNI GRCGYC 1 cut(s) 85
BssT1I CCWWGG 1 cut(s) 988
Bst2UI CCWGG 4 cut(s) 56, 220, 590, 1266
Bst4CI ACNGT 5 cut(s) 10, 391, 925, 1129, 1208
Bst6I CTCTTC 1 cut(s) 636
BstACI GRCGYC 1 cut(s) 85
BstC8I GCNNGC 2 cut(s) 244, 729
BstDEI CTNAG 4 cut(s) 167, 702, 834, 915
BstEII GGTNACC 1 cut(s) 4
BstF5I GGATG 5 cut(s) 109, 215, 565, 1163, 1291
BstH2I RGCGCY 1 cut(s) 754
BstHHI GCGC 1 cut(s) 753
BstKTI GATC 5 cut(s) 271, 319, 460, 610, 1025
BstMAI GTCTC 2 cut(s) 157, 953
BstMBI GATC 5 cut(s) 268, 316, 457, 607, 1022
BstMWI GCNNNNNNNGC 4 cut(s) 698, 728, 759, 907
BstNI CCWGG 4 cut(s) 56, 220, 590, 1266
BstPI GGTNACC 1 cut(s) 4
BstSCI CCNGG 5 cut(s) 54, 218, 588, 790, 1264
BstV1I GCAGC 2 cut(s) 740, 1302
BstX2I RGATCY 1 cut(s) 1022
BstXI CCANNNNNNTGG 1 cut(s) 1200
BstYI RGATCY 1 cut(s) 1022
Bsu15I ATCGAT 1 cut(s) 1053
Bsu36I CCTNAGG 1 cut(s) 915
BsuI GTATCC 1 cut(s) 1173
BsuRI GGCC 4 cut(s) 94, 428, 600, 625
BsuTUI ATCGAT 1 cut(s) 1053
BtsCI GGATG 5 cut(s) 109, 215, 565, 1163, 1291
BtsI GCAGTG 1 cut(s) 658
BtsIMutI CAGTG 3 cut(s) 546, 658, 1261
BveI ACCTGC 2 cut(s) 722, 1178
Cac8I GCNNGC 2 cut(s) 244, 729
CfoI GCGC 1 cut(s) 753
Cfr10I RCCGGY 1 cut(s) 428
Cfr13I GGNCC 4 cut(s) 598, 623, 1190, 1204
ClaI ATCGAT 1 cut(s) 1053
CseI GACGC 2 cut(s) 93, 890
Csp6I GTAC 2 cut(s) 354, 1225
CspCI CAANNNNNGTGG 2 cut(s) 522, 557
CviAII CATG 1 cut(s) 80
CviQI GTAC 2 cut(s) 354, 1225
DdeI CTNAG 4 cut(s) 167, 702, 834, 915
DpnI GATC 5 cut(s) 270, 318, 459, 609, 1024
DpnII GATC 5 cut(s) 268, 316, 457, 607, 1022
DraI TTTAAA 1 cut(s) 1173
DriI GACNNNNNGTC 1 cut(s) 1012
EaeI YGGCCR 1 cut(s) 426
Eam1104I CTCTTC 1 cut(s) 636
Eam1105I GACNNNNNGTC 1 cut(s) 1012
EarI CTCTTC 1 cut(s) 636
Ecl136II GAGCTC 1 cut(s) 548
Eco130I CCWWGG 1 cut(s) 988
Eco24I GRGCYC 1 cut(s) 550
Eco47I GGWCC 2 cut(s) 1190, 1204
Eco53kI GAGCTC 1 cut(s) 548
Eco57I CTGAAG 1 cut(s) 81
Eco81I CCTNAGG 1 cut(s) 915
Eco88I CYCGRG 2 cut(s) 339, 956
Eco91I GGTNACC 1 cut(s) 4
EcoICRI GAGCTC 1 cut(s) 548
EcoO109I RGGNCCY 1 cut(s) 598
EcoO65I GGTNACC 1 cut(s) 4
EcoRII CCWGG 4 cut(s) 54, 218, 588, 1264
EcoT14I CCWWGG 1 cut(s) 988
EcoT38I GRGCYC 1 cut(s) 550
ErhI CCWWGG 1 cut(s) 988
FaeI CATG 1 cut(s) 83
FaiI YATR 9 cut(s) 81, 210, 498, 861, 1201, 1276, 1278, 1280, 1313
FaqI GGGAC 1 cut(s) 1217
FatI CATG 1 cut(s) 79
FbaI TGATCA 1 cut(s) 316
FblI GTMKAC 1 cut(s) 106
Fnu4HI GCNGC 2 cut(s) 754, 1316
FokI GGATG 5 cut(s) 96, 202, 572, 1170, 1298
FriOI GRGCYC 1 cut(s) 550
Fsp4HI GCNGC 2 cut(s) 754, 1316
FspBI CTAG 4 cut(s) 482, 576, 843, 989
GlaI GCGC 1 cut(s) 752
GluI GCNGC 2 cut(s) 754, 1316
HaeII RGCGCY 1 cut(s) 754
HaeIII GGCC 4 cut(s) 94, 428, 600, 625
HapII CCGG 4 cut(s) 345, 429, 714, 792
HgaI GACGC 2 cut(s) 93, 890
HhaI GCGC 1 cut(s) 753
Hin1I GRCGYC 1 cut(s) 85
Hin1II CATG 1 cut(s) 83
Hin6I GCGC 1 cut(s) 751
HinP1I GCGC 1 cut(s) 751
HincII GTYRAC 2 cut(s) 107, 1017
HindII GTYRAC 2 cut(s) 107, 1017
HindIII AAGCTT 1 cut(s) 1067
HinfI GANTC 7 cut(s) 365, 880, 1043, 1099, 1139, 1148, 1220
HpaII CCGG 4 cut(s) 345, 429, 714, 792
HphI GGTGA 3 cut(s) 578, 682, 866
Hpy166II GTNNAC 4 cut(s) 107, 848, 1017, 1062
Hpy188I TCNGA 9 cut(s) 114, 154, 328, 457, 466, 939, 1035, 1048, 1144
Hpy188III TCNNGA 3 cut(s) 43, 395, 714
Hpy8I GTNNAC 4 cut(s) 107, 848, 1017, 1062
Hpy99I CGWCG 1 cut(s) 108
HpyAV CCTTC 1 cut(s) 105
HpyCH4III ACNGT 5 cut(s) 10, 391, 925, 1129, 1208
HpyCH4IV ACGT 1 cut(s) 850
HpyF10VI GCNNNNNNNGC 4 cut(s) 698, 728, 759, 907
HpyF3I CTNAG 4 cut(s) 167, 702, 834, 915
HpySE526I ACGT 1 cut(s) 850
Hsp92I GRCGYC 1 cut(s) 85
Hsp92II CATG 1 cut(s) 83
HspAI GCGC 1 cut(s) 751
Kpn2I TCCGGA 1 cut(s) 713
Ksp22I TGATCA 1 cut(s) 316
Kzo9I GATC 5 cut(s) 268, 316, 457, 607, 1022
LmnI GCTCC 1 cut(s) 545
Lsp1109I GCAGC 2 cut(s) 740, 1302
LweI GCATC 1 cut(s) 319
MaeI CTAG 4 cut(s) 482, 576, 843, 989
MaeII ACGT 1 cut(s) 850
MaeIII GTNAC 3 cut(s) 4, 902, 1123
MalI GATC 5 cut(s) 270, 318, 459, 609, 1024
MboI GATC 5 cut(s) 268, 316, 457, 607, 1022
MboII GAAGA 3 cut(s) 317, 623, 1157
MfeI CAATTG 2 cut(s) 528, 657
MflI RGATCY 1 cut(s) 1022
MhlI GDGCHC 2 cut(s) 550, 764
MluCI AATT 7 cut(s) 419, 528, 657, 677, 774, 864, 1232
MmeI TCCRAC 3 cut(s) 1020, 1058, 1135
MroI TCCGGA 1 cut(s) 713
MroXI GAANNNNTTC 1 cut(s) 199
MseI TTAA 6 cut(s) 297, 665, 680, 887, 1172, 1236
MspI CCGG 4 cut(s) 345, 429, 714, 792
MspR9I CCNGG 5 cut(s) 56, 220, 590, 792, 1266
MunI CAATTG 2 cut(s) 528, 657
Mva1269I GAATGC 2 cut(s) 473, 1297
MvaI CCWGG 4 cut(s) 56, 220, 590, 1266
MwoI GCNNNNNNNGC 4 cut(s) 698, 728, 759, 907
NciI CCSGG 1 cut(s) 792
NdeII GATC 5 cut(s) 268, 316, 457, 607, 1022
NlaIII CATG 1 cut(s) 83
NlaIV GGNNCC 1 cut(s) 1205
NmeAIII GCCGAG 1 cut(s) 70
NmuCI GTSAC 2 cut(s) 902, 1123
PaeR7I CTCGAG 1 cut(s) 339
PcsI WCGNNNNNNNCGW 1 cut(s) 72
PctI GAATGC 2 cut(s) 473, 1297
PdmI GAANNNNTTC 1 cut(s) 199
PfeI GAWTC 7 cut(s) 365, 880, 1043, 1099, 1139, 1148, 1220
PfoI TCCNGGA 1 cut(s) 790
PkrI GCNGC 2 cut(s) 755, 1317
Psp124BI GAGCTC 1 cut(s) 550
Psp6I CCWGG 4 cut(s) 54, 218, 588, 1264
PspEI GGTNACC 1 cut(s) 4
PspGI CCWGG 4 cut(s) 54, 218, 588, 1264
PspN4I GGNNCC 1 cut(s) 1205
PspPI GGNCC 4 cut(s) 598, 623, 1190, 1204
PspXI VCTCGAGB 1 cut(s) 339
PsuI RGATCY 1 cut(s) 1022
RsaI GTAC 2 cut(s) 355, 1226
RsaNI GTAC 2 cut(s) 354, 1225
SacI GAGCTC 1 cut(s) 550
SalI GTCGAC 1 cut(s) 105
SaqAI TTAA 6 cut(s) 297, 665, 680, 887, 1172, 1236
SatI GCNGC 2 cut(s) 754, 1316
Sau3AI GATC 5 cut(s) 268, 316, 457, 607, 1022
Sau96I GGNCC 4 cut(s) 598, 623, 1190, 1204
ScaI AGTACT 1 cut(s) 355
ScrFI CCNGG 5 cut(s) 56, 220, 590, 792, 1266
SduI GDGCHC 2 cut(s) 550, 764
SfaNI GCATC 1 cut(s) 319
Sfr274I CTCGAG 1 cut(s) 339
SinI GGWCC 2 cut(s) 1190, 1204
SlaI CTCGAG 1 cut(s) 339
SmlI CTYRAG 2 cut(s) 339, 757
SmoI CTYRAG 2 cut(s) 339, 757
SpeI ACTAGT 1 cut(s) 575
Sse9I AATT 7 cut(s) 419, 528, 657, 677, 774, 864, 1232
SsiI CCGC 4 cut(s) 130, 566, 1305, 1318
SspI AATATT 1 cut(s) 123
SspMI CTAG 4 cut(s) 482, 576, 843, 989
SstI GAGCTC 1 cut(s) 550
StyD4I CCNGG 5 cut(s) 54, 218, 588, 790, 1264
StyI CCWWGG 1 cut(s) 988
TaaI ACNGT 5 cut(s) 10, 391, 925, 1129, 1208
TaiI ACGT 1 cut(s) 853
TaqI TCGA 7 cut(s) 50, 66, 106, 340, 363, 1053, 1097
TasI AATT 7 cut(s) 419, 528, 657, 677, 774, 864, 1232
TatI WGTACW 1 cut(s) 353
TfiI GAWTC 7 cut(s) 365, 880, 1043, 1099, 1139, 1148, 1220
Tru1I TTAA 6 cut(s) 297, 665, 680, 887, 1172, 1236
Tru9I TTAA 6 cut(s) 297, 665, 680, 887, 1172, 1236
TscAI CASTG 3 cut(s) 546, 658, 1261
TseFI GTSAC 2 cut(s) 902, 1123
TseI GCWGC 2 cut(s) 753, 1315
Tsp45I GTSAC 2 cut(s) 902, 1123
TspDTI ATGAA 4 cut(s) 68, 603, 684, 1103
TspRI CASTG 3 cut(s) 546, 658, 1261
VpaK11BI GGWCC 2 cut(s) 1190, 1204
XapI RAATTY 2 cut(s) 419, 1232
XhoI CTCGAG 1 cut(s) 339
XmaJI CCTAGG 1 cut(s) 988
XmiI GTMKAC 1 cut(s) 106
XmnI GAANNNNTTC 1 cut(s) 199
XspI CTAG 4 cut(s) 482, 576, 843, 989
ZrmI AGTACT 1 cut(s) 355
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.