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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G11320 |
| fragaria_vesca | FvH4_2g38110 FvH4_2g38110 FvH4_3g40530 FvH4_3g40670 FvH4_3g40670 FvH4_3g40670 FvH4_3g40670 |
| malus_domestica | MD08G1009600.v1.1 |
| prunus_persica | Prupe.1G361500_v2.0.a1 Prupe.1G361500_v2.0.a1 |
| pyrus_communis | pycom08g00810 |
| rosa_chinensis | RchiOBHm_Chr5g0073211 RchiOBHm_Chr6g0303441 |
| rosa_laevigata | RLG00000011085 RLG00000036374 |
| rosa_multiflora | Rmu_co8164096.1_g000001 Rmu_ssc0000114.1_g000051 |
| rosa_roxburghii | Rroxscaffold_1G00007980 Rroxscaffold_7G00164760 |
| rosa_rugosa | Rorug05G0422300 Rorug06G0321100 Rorug06G0321200 |
| rosa_samantha | Rh5AG479000 Rh5BG499700 Rh5CG522900 Rh5DG511800 Rh6AG435800 Rh6BG467700 Rh6CG447700 Rh6DG434400 |
| rosa_wichuraiana | Rw5G044530 Rw6G037710 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1543 |
| AccBSI | CCGCTC | 1 cut(s) | 1404 |
| AccI | GTMKAC | 2 cut(s) | 1377, 1461 |
| AccIII | TCCGGA | 1 cut(s) | 1193 |
| AciI | CCGC | 8 cut(s) | 11, 34, 61, 350, 1250, 1402, 1547, 1636 |
| AclWI | GGATC | 4 cut(s) | 894, 907, 1306, 1319 |
| AcoI | YGGCCR | 1 cut(s) | 360 |
| AcsI | RAATTY | 1 cut(s) | 985 |
| AcuI | CTGAAG | 4 cut(s) | 132, 667, 1041, 1232 |
| AcyI | GRCGYC | 1 cut(s) | 1443 |
| AfaI | GTAC | 1 cut(s) | 1361 |
| AfiI | CCNNNNNNNGG | 9 cut(s) | 141, 192, 193, 866, 1035, 1083, 1096, 1308, 1543 |
| AflIII | ACRYGT | 1 cut(s) | 775 |
| AgsI | TTSAA | 7 cut(s) | 58, 317, 848, 1070, 1103, 1114, 1594 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 1228 |
| AjiI | CACGTC | 1 cut(s) | 1375 |
| AjnI | CCWGG | 5 cut(s) | 171, 864, 1095, 1464, 1488 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 1014, 1046, 1106, 1138 |
| AluBI | AGCT | 6 cut(s) | 482, 730, 791, 876, 1218, 1429 |
| AluI | AGCT | 6 cut(s) | 482, 730, 791, 876, 1218, 1429 |
| Alw21I | GWGCWC | 3 cut(s) | 484, 1220, 1431 |
| Alw26I | GTCTC | 3 cut(s) | 252, 830, 1126 |
| AlwI | GGATC | 4 cut(s) | 894, 907, 1306, 1319 |
| Aor13HI | TCCGGA | 1 cut(s) | 1193 |
| AoxI | GGCC | 7 cut(s) | 4, 177, 360, 532, 1072, 1392, 1467 |
| ApeKI | GCWGC | 4 cut(s) | 678, 1172, 1382, 1493 |
| ApoI | RAATTY | 1 cut(s) | 985 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1433, 1465 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1091 |
| AspLEI | GCGC | 4 cut(s) | 678, 757, 1301, 1387 |
| AspS9I | GGNCC | 5 cut(s) | 4, 532, 557, 1073, 1633 |
| AsuHPI | GGTGA | 2 cut(s) | 740, 1321 |
| AvaII | GGWCC | 2 cut(s) | 557, 1633 |
| AxyI | CCTNAGG | 2 cut(s) | 1389, 1572 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 330, 363 |
| BalI | TGGCCA | 1 cut(s) | 362 |
| BamHI | GGATCC | 2 cut(s) | 899, 1311 |
| BanII | GRGCYC | 3 cut(s) | 484, 1220, 1431 |
| BbsI | GAAGAC | 1 cut(s) | 737 |
| Bbv12I | GWGCWC | 3 cut(s) | 484, 1220, 1431 |
| BbvI | GCAGC | 4 cut(s) | 665, 1184, 1369, 1480 |
| BccI | CCATC | 3 cut(s) | 595, 1029, 1280 |
| BceAI | ACGGC | 1 cut(s) | 1240 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 478, 512 |
| BciT130I | CCWGG | 5 cut(s) | 173, 866, 1097, 1466, 1490 |
| BclI | TGATCA | 2 cut(s) | 205, 1554 |
| BcoDI | GTCTC | 3 cut(s) | 252, 830, 1126 |
| BfaI | CTAG | 3 cut(s) | 416, 663, 768 |
| BfoI | RGCGCY | 2 cut(s) | 679, 758 |
| BglII | AGATCT | 1 cut(s) | 1338 |
| BisI | GCNGC | 5 cut(s) | 34, 679, 1173, 1383, 1494 |
| BlsI | GCNGC | 5 cut(s) | 35, 680, 1174, 1384, 1495 |
| BmcAI | AGTACT | 1 cut(s) | 1361 |
| Bme1390I | CCNGG | 5 cut(s) | 173, 866, 1097, 1466, 1490 |
| Bme18I | GGWCC | 2 cut(s) | 557, 1633 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 1228 |
| BmgBI | CACGTC | 1 cut(s) | 1375 |
| BmgT120I | GGNCC | 5 cut(s) | 4, 532, 557, 1073, 1633 |
| BmiI | GGNNCC | 4 cut(s) | 901, 1075, 1088, 1313 |
| BmrFI | CCNGG | 5 cut(s) | 173, 866, 1097, 1466, 1490 |
| BmrI | ACTGGG | 4 cut(s) | 300, 467, 1070, 1447 |
| BmsI | GCATC | 1 cut(s) | 903 |
| BmuI | ACTGGG | 4 cut(s) | 300, 467, 1070, 1447 |
| BpiI | GAAGAC | 1 cut(s) | 737 |
| BpuEI | CTTGAG | 1 cut(s) | 1415 |
| BsaHI | GRCGYC | 1 cut(s) | 1443 |
| BsaJI | CCNNGG | 3 cut(s) | 261, 864, 865 |
| BsaWI | WCCGGW | 2 cut(s) | 43, 1193 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 1388, 1391, 1418, 1421 |
| Bsc4I | CCNNNNNNNGG | 9 cut(s) | 141, 192, 193, 866, 1035, 1083, 1096, 1308, 1543 |
| Bse1I | ACTGG | 5 cut(s) | 295, 473, 901, 1065, 1442 |
| Bse21I | CCTNAGG | 2 cut(s) | 1389, 1572 |
| Bse3DI | GCAATG | 1 cut(s) | 903 |
| BseAI | TCCGGA | 1 cut(s) | 1193 |
| BseBI | CCWGG | 5 cut(s) | 173, 866, 1097, 1466, 1490 |
| BseDI | CCNNGG | 3 cut(s) | 261, 864, 865 |
| BseGI | GGATG | 3 cut(s) | 499, 1040, 1485 |
| BseLI | CCNNNNNNNGG | 9 cut(s) | 141, 192, 193, 866, 1035, 1083, 1096, 1308, 1543 |
| BseMI | GCAATG | 1 cut(s) | 903 |
| BseMII | CTCAG | 3 cut(s) | 825, 1127, 1563 |
| BseNI | ACTGG | 5 cut(s) | 295, 473, 901, 1065, 1442 |
| BseRI | GAGGAG | 6 cut(s) | 1396, 1399, 1402, 1589, 1640, 1643 |
| BseXI | GCAGC | 4 cut(s) | 665, 1184, 1369, 1480 |
| Bsh1285I | CGRYCG | 2 cut(s) | 1179, 1402 |
| BshFI | GGCC | 7 cut(s) | 6, 179, 362, 534, 1074, 1394, 1469 |
| BsiEI | CGRYCG | 2 cut(s) | 1179, 1402 |
| BsiHKAI | GWGCWC | 3 cut(s) | 484, 1220, 1431 |
| BsiSI | CCGG | 3 cut(s) | 44, 1194, 1416 |
| BslFI | GGGAC | 2 cut(s) | 157, 1454 |
| BslI | CCNNNNNNNGG | 9 cut(s) | 141, 192, 193, 866, 1035, 1083, 1096, 1308, 1543 |
| BsmAI | GTCTC | 3 cut(s) | 252, 830, 1126 |
| BsmFI | GGGAC | 2 cut(s) | 157, 1454 |
| BsmI | GAATGC | 1 cut(s) | 407 |
| BsnI | GGCC | 7 cut(s) | 6, 179, 362, 534, 1074, 1394, 1469 |
| Bsp1286I | GDGCHC | 3 cut(s) | 484, 1220, 1431 |
| Bsp13I | TCCGGA | 1 cut(s) | 1193 |
| BspACI | CCGC | 8 cut(s) | 11, 34, 61, 350, 1250, 1402, 1547, 1636 |
| BspANI | GGCC | 7 cut(s) | 6, 179, 362, 534, 1074, 1394, 1469 |
| BspCNI | CTCAG | 3 cut(s) | 826, 1128, 1564 |
| BspEI | TCCGGA | 1 cut(s) | 1193 |
| BspLI | GGNNCC | 4 cut(s) | 901, 1075, 1088, 1313 |
| BspPI | GGATC | 4 cut(s) | 894, 907, 1306, 1319 |
| BspQI | GCTCTTC | 1 cut(s) | 1208 |
| BsrBI | CCGCTC | 1 cut(s) | 1404 |
| BsrDI | GCAATG | 1 cut(s) | 903 |
| BsrI | ACTGG | 5 cut(s) | 295, 473, 901, 1065, 1442 |
| BssECI | CCNNGG | 3 cut(s) | 261, 864, 865 |
| BssNI | GRCGYC | 1 cut(s) | 1443 |
| Bst2UI | CCWGG | 5 cut(s) | 173, 866, 1097, 1466, 1490 |
| Bst4CI | ACNGT | 5 cut(s) | 325, 639, 844, 1006, 1543 |
| Bst6I | CTCTTC | 3 cut(s) | 1208, 1481, 1617 |
| BstACI | GRCGYC | 1 cut(s) | 1443 |
| BstC8I | GCNNGC | 1 cut(s) | 407 |
| BstDEI | CTNAG | 5 cut(s) | 269, 834, 1136, 1389, 1572 |
| BstF5I | GGATG | 3 cut(s) | 499, 1040, 1485 |
| BstH2I | RGCGCY | 2 cut(s) | 679, 758 |
| BstHHI | GCGC | 4 cut(s) | 678, 757, 1301, 1387 |
| BstMAI | GTCTC | 3 cut(s) | 252, 830, 1126 |
| BstMCI | CGRYCG | 2 cut(s) | 1179, 1402 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 425, 434, 632, 684, 1224, 1391 |
| BstNI | CCWGG | 5 cut(s) | 173, 866, 1097, 1466, 1490 |
| BstNSI | RCATGY | 1 cut(s) | 779 |
| BstSCI | CCNGG | 5 cut(s) | 171, 864, 1095, 1464, 1488 |
| BstV1I | GCAGC | 4 cut(s) | 665, 1184, 1369, 1480 |
| BstV2I | GAAGAC | 1 cut(s) | 737 |
| BstX2I | RGATCY | 3 cut(s) | 899, 1311, 1338 |
| BstYI | RGATCY | 3 cut(s) | 899, 1311, 1338 |
| Bsu36I | CCTNAGG | 2 cut(s) | 1389, 1572 |
| BsuRI | GGCC | 7 cut(s) | 6, 179, 362, 534, 1074, 1394, 1469 |
| BtrI | CACGTC | 1 cut(s) | 1375 |
| BtsCI | GGATG | 3 cut(s) | 499, 1040, 1485 |
| BtsIMutI | CAGTG | 2 cut(s) | 316, 480 |
| Cac8I | GCNNGC | 1 cut(s) | 407 |
| CfoI | GCGC | 4 cut(s) | 678, 757, 1301, 1387 |
| Cfr13I | GGNCC | 5 cut(s) | 4, 532, 557, 1073, 1633 |
| CseI | GACGC | 2 cut(s) | 1388, 1451 |
| Csp6I | GTAC | 1 cut(s) | 1360 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 456, 491 |
| CviAII | CATG | 5 cut(s) | 229, 776, 785, 1282, 1552 |
| CviQI | GTAC | 1 cut(s) | 1360 |
| DdeI | CTNAG | 5 cut(s) | 269, 834, 1136, 1389, 1572 |
| DraI | TTTAAA | 2 cut(s) | 570, 1050 |
| DriI | GACNNNNNGTC | 1 cut(s) | 1228 |
| EaeI | YGGCCR | 1 cut(s) | 360 |
| Eam1104I | CTCTTC | 3 cut(s) | 1208, 1481, 1617 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 1228 |
| EarI | CTCTTC | 3 cut(s) | 1208, 1481, 1617 |
| EciI | GGCGGA | 2 cut(s) | 365, 1562 |
| Ecl136II | GAGCTC | 3 cut(s) | 482, 1218, 1429 |
| Eco24I | GRGCYC | 3 cut(s) | 484, 1220, 1431 |
| Eco47I | GGWCC | 2 cut(s) | 557, 1633 |
| Eco53kI | GAGCTC | 3 cut(s) | 482, 1218, 1429 |
| Eco57I | CTGAAG | 4 cut(s) | 132, 667, 1041, 1232 |
| Eco81I | CCTNAGG | 2 cut(s) | 1389, 1572 |
| EcoICRI | GAGCTC | 3 cut(s) | 482, 1218, 1429 |
| EcoO109I | RGGNCCY | 2 cut(s) | 532, 1073 |
| EcoRII | CCWGG | 5 cut(s) | 171, 864, 1095, 1464, 1488 |
| EcoT22I | ATGCAT | 1 cut(s) | 234 |
| EcoT38I | GRGCYC | 3 cut(s) | 484, 1220, 1431 |
| FaeI | CATG | 5 cut(s) | 232, 779, 788, 1285, 1555 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1592, 1624 |
| FaqI | GGGAC | 2 cut(s) | 157, 1454 |
| FatI | CATG | 5 cut(s) | 228, 775, 784, 1281, 1551 |
| FauI | CCCGC | 1 cut(s) | 18 |
| FbaI | TGATCA | 2 cut(s) | 205, 1554 |
| FblI | GTMKAC | 2 cut(s) | 1377, 1461 |
| Fnu4HI | GCNGC | 5 cut(s) | 34, 679, 1173, 1383, 1494 |
| FokI | GGATG | 3 cut(s) | 506, 1047, 1472 |
| FriOI | GRGCYC | 3 cut(s) | 484, 1220, 1431 |
| Fsp4HI | GCNGC | 5 cut(s) | 34, 679, 1173, 1383, 1494 |
| FspBI | CTAG | 3 cut(s) | 416, 663, 768 |
| GlaI | GCGC | 4 cut(s) | 677, 756, 1300, 1386 |
| GluI | GCNGC | 5 cut(s) | 34, 679, 1173, 1383, 1494 |
| HaeII | RGCGCY | 2 cut(s) | 679, 758 |
| HaeIII | GGCC | 7 cut(s) | 6, 179, 362, 534, 1074, 1394, 1469 |
| HapII | CCGG | 3 cut(s) | 44, 1194, 1416 |
| HgaI | GACGC | 2 cut(s) | 1388, 1451 |
| HhaI | GCGC | 4 cut(s) | 678, 757, 1301, 1387 |
| Hin1I | GRCGYC | 1 cut(s) | 1443 |
| Hin1II | CATG | 5 cut(s) | 232, 779, 788, 1285, 1555 |
| Hin6I | GCGC | 4 cut(s) | 676, 755, 1299, 1385 |
| HinP1I | GCGC | 4 cut(s) | 676, 755, 1299, 1385 |
| HincII | GTYRAC | 4 cut(s) | 710, 894, 1378, 1462 |
| HindII | GTYRAC | 4 cut(s) | 710, 894, 1378, 1462 |
| HpaII | CCGG | 3 cut(s) | 44, 1194, 1416 |
| HphI | GGTGA | 2 cut(s) | 740, 1321 |
| Hpy166II | GTNNAC | 7 cut(s) | 710, 773, 894, 1058, 1243, 1378, 1462 |
| Hpy188I | TCNGA | 9 cut(s) | 85, 262, 391, 400, 912, 925, 1012, 1021, 1222 |
| Hpy188III | TCNNGA | 8 cut(s) | 150, 254, 329, 648, 1194, 1432, 1513, 1600 |
| Hpy8I | GTNNAC | 7 cut(s) | 710, 773, 894, 1058, 1243, 1378, 1462 |
| Hpy99I | CGWCG | 5 cut(s) | 1226, 1379, 1382, 1400, 1424 |
| HpyAV | CCTTC | 4 cut(s) | 525, 1064, 1191, 1342 |
| HpyCH4III | ACNGT | 5 cut(s) | 325, 639, 844, 1006, 1543 |
| HpyCH4IV | ACGT | 2 cut(s) | 1326, 1374 |
| HpyCH4V | TGCA | 9 cut(s) | 67, 232, 461, 467, 489, 590, 719, 1365, 1496 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 425, 434, 632, 684, 1224, 1391 |
| HpyF3I | CTNAG | 5 cut(s) | 269, 834, 1136, 1389, 1572 |
| HpySE526I | ACGT | 2 cut(s) | 1326, 1374 |
| Hsp92I | GRCGYC | 1 cut(s) | 1443 |
| Hsp92II | CATG | 5 cut(s) | 232, 779, 788, 1285, 1555 |
| HspAI | GCGC | 4 cut(s) | 676, 755, 1299, 1385 |
| Kpn2I | TCCGGA | 1 cut(s) | 1193 |
| Ksp22I | TGATCA | 2 cut(s) | 205, 1554 |
| LguI | GCTCTTC | 1 cut(s) | 1208 |
| LmnI | GCTCC | 3 cut(s) | 479, 1223, 1409 |
| Lsp1109I | GCAGC | 4 cut(s) | 665, 1184, 1369, 1480 |
| LweI | GCATC | 1 cut(s) | 903 |
| MaeI | CTAG | 3 cut(s) | 416, 663, 768 |
| MaeII | ACGT | 2 cut(s) | 1326, 1374 |
| MaeIII | GTNAC | 3 cut(s) | 1000, 1162, 1327 |
| MbiI | CCGCTC | 1 cut(s) | 1404 |
| MboII | GAAGA | 6 cut(s) | 737, 1034, 1213, 1225, 1468, 1634 |
| MfeI | CAATTG | 2 cut(s) | 462, 591 |
| MflI | RGATCY | 3 cut(s) | 899, 1311, 1338 |
| MhlI | GDGCHC | 3 cut(s) | 484, 1220, 1431 |
| MlsI | TGGCCA | 1 cut(s) | 362 |
| MluCI | AATT | 7 cut(s) | 95, 126, 462, 591, 761, 927, 985 |
| MluNI | TGGCCA | 1 cut(s) | 362 |
| MlyI | GAGTC | 5 cut(s) | 172, 254, 678, 1010, 1238 |
| MmeI | TCCRAC | 3 cut(s) | 935, 1064, 1245 |
| Mox20I | TGGCCA | 1 cut(s) | 362 |
| Mph1103I | ATGCAT | 1 cut(s) | 234 |
| MroI | TCCGGA | 1 cut(s) | 1193 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1091 |
| MscI | TGGCCA | 1 cut(s) | 362 |
| MseI | TTAA | 5 cut(s) | 287, 297, 569, 1049, 1119 |
| MslI | CAYNNNNRTG | 2 cut(s) | 237, 378 |
| Msp20I | TGGCCA | 1 cut(s) | 362 |
| MspI | CCGG | 3 cut(s) | 44, 1194, 1416 |
| MspR9I | CCNGG | 5 cut(s) | 173, 866, 1097, 1466, 1490 |
| MunI | CAATTG | 2 cut(s) | 462, 591 |
| Mva1269I | GAATGC | 1 cut(s) | 407 |
| MvaI | CCWGG | 5 cut(s) | 173, 866, 1097, 1466, 1490 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 425, 434, 632, 684, 1224, 1391 |
| NlaIII | CATG | 5 cut(s) | 232, 779, 788, 1285, 1555 |
| NlaIV | GGNNCC | 4 cut(s) | 901, 1075, 1088, 1313 |
| NmuCI | GTSAC | 1 cut(s) | 1327 |
| NsiI | ATGCAT | 1 cut(s) | 234 |
| NspI | RCATGY | 1 cut(s) | 779 |
| PasI | CCCWGGG | 1 cut(s) | 865 |
| PciI | ACATGT | 1 cut(s) | 775 |
| PciSI | GCTCTTC | 1 cut(s) | 1208 |
| PcsI | WCGNNNNNNNCGW | 5 cut(s) | 1172, 1242, 1299, 1449, 1458 |
| PctI | GAATGC | 1 cut(s) | 407 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1091 |
| PfeI | GAWTC | 7 cut(s) | 257, 920, 976, 1025, 1103, 1262, 1579 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1543 |
| PfoI | TCCNGGA | 1 cut(s) | 171 |
| PkrI | GCNGC | 5 cut(s) | 35, 680, 1174, 1384, 1495 |
| Ple19I | CGATCG | 1 cut(s) | 1179 |
| PleI | GAGTC | 5 cut(s) | 171, 253, 677, 1010, 1237 |
| PpsI | GAGTC | 5 cut(s) | 171, 253, 677, 1010, 1237 |
| PscI | ACATGT | 1 cut(s) | 775 |
| Psp124BI | GAGCTC | 3 cut(s) | 484, 1220, 1431 |
| Psp6I | CCWGG | 5 cut(s) | 171, 864, 1095, 1464, 1488 |
| PspGI | CCWGG | 5 cut(s) | 171, 864, 1095, 1464, 1488 |
| PspN4I | GGNNCC | 4 cut(s) | 901, 1075, 1088, 1313 |
| PspPI | GGNCC | 5 cut(s) | 4, 532, 557, 1073, 1633 |
| PsuI | RGATCY | 3 cut(s) | 899, 1311, 1338 |
| PvuI | CGATCG | 1 cut(s) | 1179 |
| RsaI | GTAC | 1 cut(s) | 1361 |
| RsaNI | GTAC | 1 cut(s) | 1360 |
| RseI | CAYNNNNRTG | 2 cut(s) | 237, 378 |
| SacI | GAGCTC | 3 cut(s) | 484, 1220, 1431 |
| SalI | GTCGAC | 2 cut(s) | 1376, 1460 |
| SapI | GCTCTTC | 1 cut(s) | 1208 |
| SaqAI | TTAA | 5 cut(s) | 287, 297, 569, 1049, 1119 |
| SatI | GCNGC | 5 cut(s) | 34, 679, 1173, 1383, 1494 |
| Sau96I | GGNCC | 5 cut(s) | 4, 532, 557, 1073, 1633 |
| ScaI | AGTACT | 1 cut(s) | 1361 |
| SchI | GAGTC | 5 cut(s) | 172, 254, 678, 1010, 1238 |
| ScrFI | CCNGG | 5 cut(s) | 173, 866, 1097, 1466, 1490 |
| SduI | GDGCHC | 3 cut(s) | 484, 1220, 1431 |
| SfaNI | GCATC | 1 cut(s) | 903 |
| SgrDI | CGTCGACG | 1 cut(s) | 1376 |
| SinI | GGWCC | 2 cut(s) | 557, 1633 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 237, 378 |
| SmlI | CTYRAG | 1 cut(s) | 1430 |
| SmoI | CTYRAG | 1 cut(s) | 1430 |
| Sse9I | AATT | 7 cut(s) | 95, 126, 462, 591, 761, 927, 985 |
| SsiI | CCGC | 8 cut(s) | 11, 34, 61, 350, 1250, 1402, 1547, 1636 |
| SspI | AATATT | 1 cut(s) | 285 |
| SspMI | CTAG | 3 cut(s) | 416, 663, 768 |
| SstI | GAGCTC | 3 cut(s) | 484, 1220, 1431 |
| StyD4I | CCNGG | 5 cut(s) | 171, 864, 1095, 1464, 1488 |
| TaaI | ACNGT | 5 cut(s) | 325, 639, 844, 1006, 1543 |
| TaiI | ACGT | 2 cut(s) | 1329, 1377 |
| TasI | AATT | 7 cut(s) | 95, 126, 462, 591, 761, 927, 985 |
| TatI | WGTACW | 1 cut(s) | 1359 |
| TauI | GCSGC | 1 cut(s) | 36 |
| TfiI | GAWTC | 7 cut(s) | 257, 920, 976, 1025, 1103, 1262, 1579 |
| Tru1I | TTAA | 5 cut(s) | 287, 297, 569, 1049, 1119 |
| Tru9I | TTAA | 5 cut(s) | 287, 297, 569, 1049, 1119 |
| TscAI | CASTG | 2 cut(s) | 316, 480 |
| TseFI | GTSAC | 1 cut(s) | 1327 |
| TseI | GCWGC | 4 cut(s) | 678, 1172, 1382, 1493 |
| Tsp45I | GTSAC | 1 cut(s) | 1327 |
| TspDTI | ATGAA | 5 cut(s) | 107, 217, 537, 618, 980 |
| TspRI | CASTG | 2 cut(s) | 316, 480 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1543 |
| VpaK11BI | GGWCC | 2 cut(s) | 557, 1633 |
| XapI | RAATTY | 1 cut(s) | 985 |
| XceI | RCATGY | 1 cut(s) | 779 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1339 |
| XmiI | GTMKAC | 2 cut(s) | 1377, 1461 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1091 |
| XspI | CTAG | 3 cut(s) | 416, 663, 768 |
| ZrmI | AGTACT | 1 cut(s) | 1361 |
| Zsp2I | ATGCAT | 1 cut(s) | 234 |