Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb3

Orthogroup ID

OG0002369

Physical Location & Seq

Genomic Coordinates Forward (+)

5777639 .. 5781816

Gene Structure 4178 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_3g09930.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1839 bp

ATGGGAGCGAGCGGAACTGAACCGAGCGCTGGCGGCGGCGAGGGGCTGACGAAGAGGAGGGGATGCTCGTGTTCGAAAGAAGATTTTCTACCGGAGGAGTCGTTCGAGAGCTGGGGCAATTACGTAAATGCGCTGAGGTCGACTCCGGCGCGGTTCAAGGACCGGTTCCTGACGCGGTCGGCGGACAGCACGGAGCTGGTGGAGATGAAGGCGCGGAGCCAGCACGAGATGAAGAAGACGCTCAACTGGTGGGACCTCATCTGGTTCGGCATCGGTGCCGTCATCGGCGCCGGAATATTCGTCCTCACTGGAATCGAGGCCAAGAACCACGCCGGTCCCGCCGTGGTTATGTCCTACGTCGTCTCCGGCGTCTCCGCCTTGCTATCTGTTTTCTGTTACACCGAGTTCGCCGTCGAGATTCCCGTTGCGGGCGGCTCATTTGCCTACCTAAGAGTGGAGCTTGGGGACTTCGTGGCCTACATTGCAGCAGGCAACATCCTCCTCGAATATGTCATAGGCGGTGCGGCTGTCGCGCGTTCCTGGACCTCCTACTTCACCACCCTATGCAACCGGAACTCCAATGATTTTCGAATCACTGTCGACGGCTGGTCGGAAAACTACAAGTACCTCGACCCCATCGCCATCGGGGTCATCATCTGCATCTGCATACTCGCCGTCATGAGCACAAAGGGCTCCTCGCGCCTCAACTACATTGCCTCCATAGTCCACGTCATTGTCATTCTCTTCATCATCATAGCAGGTCTCACCAAAGCAGACACTAACAACTACAAGGACTTTGCCCCGCATGGTGCTCGCGGTATCTTCCAAGCCTCGGCAGTTCTCTTCTTTGCATACGTTGGATTTGATGCCGTTTCAACCATGGCCGAAGAGACCAAGAATCCTGCTCGTGACATCCCAATAGGGCTGGTTGGTTCCATGGTGATCACCACCACTGTTTATTGCTTGCTAGCCGTGACCCTGTGCCTTATGGTTCCATACGGGATGATCGATGAGCAAGCTCCATTTTCTAAAGCGTTTGAGACGGTTGGTATGAGTTGGGCCAAGTATGTGGTTGCAGCTGGAGCTCTAAAAGGGATGACTAGTGTTTTGCTAGTCGGGGCAGTTGGTCAGGCTAGGTATTTGACACACATTGCCCGAACACACATGTTGCCCCCATGGTTTGCTCAAGTTGATGCCAAGACAGGTACTCCAGTCCATGCCACAATCGTCATGCTCGCAGCCACAGCTGTAATCGCCTTCTTCACCAGCCTCGACGTTCTTGCTAACCTTCTCTCCATTTCTACGCTATTCATCTTCAGCCTAGTCGCCACTGCTCTCCTCGTACGCCGCTACTATGTAACCGGCGTGACTACGGATGCAAACAGGAATAAGCTCATAGTTTGCATTTCTATGATATATGGGGGTGCAATTGCCACTTCTGCTTACTGGGGTGTTAGCGATGATTGGGTAGGGTATTGCGCGACGGCTCCTATTTGGTTCTTGGGGACTTTGGGGATCTGGTTTCTTGTTCCGCAAGCAAGGAGTCCAAAGCTTTGGGGGGTGCCATTGGTTCCATGGTTGCCTGCACTTTCAATTGGCATCAACATTTTCTTGCTTGGGTCGATTGATGGTGATTCTTTTATCAGGTTTGCAGCGTGGACTGTGATTATCTTGGTTTACTACATTTTCTTTGGGTTGCATGCTTCATATGACACAGCAAAGGACTCTGAAGCTAAGAAGCTCGAGGGTGGGAAATATGAGACGAAGATCGAAGGAACTAAGGACTGTGGTTTGGATGGTGCTCATAACAATAAGGCCTCTACAGAACCTGCTAGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005623 GO:0005886 GO:0016020 GO:0044464 GO:0071944

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AA_permease_2 AA_permease_C

Protein Analysis

613

Amino Acids

66.16

Weight (kDa)

6.52

Isoelectric Point (pI)

31.57

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AA_permease_2	PF13520	81 - 451	3.3e-51	Amino acid permease
AA_permease	PF00324	86 - 450	9.5e-35	Amino acid permease
AA_permease_C	PF13906	519 - 569	9.6e-18	C-terminus of AA_permease

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002369)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G21120 AT4G21120
fragaria_vesca	FvH4_3g09930 FvH4_3g09940
malus_domestica	MD05G1274600.v1.1 MD05G1274700.v1.1 MD05G1274900.v1.1 MD10G1254300.v1.1
prunus_persica	Prupe.4G089000_v2.0.a1 Prupe.4G089100_v2.0.a1
pyrus_communis	pycom05g25610 pycom05g25630 pycom10g21000
rosa_chinensis	RchiOBHm_Chr5g0015621 RchiOBHm_Chr5g0015661 RchiOBHm_Chr5g0015691 RchiOBHm_Chr5g0015791
rosa_laevigata	RLG00000032214 RLG00000032217 RLG00000032219
rosa_multiflora	Rmu_sc0000843.1_g000004 Rmu_sc0000843.1_g000008 Rmu_sc0003230.1_g000003 Rmu_sc0003230.1_g000005
rosa_roxburghii	Rroxscaffold_1G00060830
rosa_rugosa	Rorug01G0078300 Rorug05G0029000 Rorug05G0029100
rosa_samantha	Rh5AG122300 Rh5AG122400 Rh5AG122600 Rh5BG120900 Rh5BG121200 Rh5BG121700 Rh5CG131300 Rh5CG131900 Rh5CG132800 Rh5DG119900 Rh5DG120600
rosa_wichuraiana	Rw5G010550 Rw5G010560 Rw5G010570

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	749
AccB1I	GGYRCC	3 cut(s)	275, 287, 1561
AccBSI	CCGCTC	1 cut(s)	12
AccI	GTMKAC	2 cut(s)	140, 600
AccII	CGCG	8 cut(s)	151, 175, 214, 533, 535, 700, 816, 1481
AclWI	GGATC	1 cut(s)	1523
AcoI	YGGCCR	1 cut(s)	882
AcuI	CTGAAG	2 cut(s)	1300, 1749
AcyI	GRCGYC	2 cut(s)	288, 369
AfaI	GTAC	3 cut(s)	626, 1207, 1344
AfeI	AGCGCT	1 cut(s)	28
AfiI	CCNNNNNNNGG	4 cut(s)	29, 428, 454, 832
AflIII	ACRYGT	1 cut(s)	1164
AgeI	ACCGGT	1 cut(s)	162
AgsI	TTSAA	3 cut(s)	157, 876, 1593
AhdI	GACNNNNNGTC	1 cut(s)	607
AhlI	ACTAGT	1 cut(s)	1100
AjiI	CACGTC	1 cut(s)	730
AjnI	CCWGG	1 cut(s)	539
AloI	GAACNNNNNNTCC	2 cut(s)	86, 118
Alw21I	GWGCWC	4 cut(s)	686, 814, 1087, 1804
Alw26I	GTCTC	6 cut(s)	367, 376, 767, 884, 1034, 1754
AlwI	GGATC	1 cut(s)	1523
AlwNI	CAGNNNCTG	1 cut(s)	1829
Ama87I	CYCGRG	1 cut(s)	1742
Aor51HI	AGCGCT	1 cut(s)	28
AoxI	GGCC	5 cut(s)	318, 474, 882, 1059, 1815
ApeKI	GCWGC	4 cut(s)	485, 1076, 1238, 1652
ArsI	GACNNNNNNTTYG	2 cut(s)	1090, 1122
AsiGI	ACCGGT	1 cut(s)	162
Asp700I	GAANNNNTTC	1 cut(s)	84
AspLEI	GCGC	8 cut(s)	29, 133, 151, 214, 290, 535, 702, 1481
AspS9I	GGNCC	5 cut(s)	160, 253, 335, 543, 1059
AsuHPI	GGTGA	6 cut(s)	547, 757, 937, 952, 1255, 1643
AsuII	TTCGAA	2 cut(s)	74, 589
AsuNHI	GCTAGC	1 cut(s)	967
AvaI	CYCGRG	1 cut(s)	1742
AvaII	GGWCC	4 cut(s)	160, 253, 335, 543
BaeI	ACNNNNGTAYC	2 cut(s)	1197, 1230
BanI	GGYRCC	3 cut(s)	275, 287, 1561
BanII	GRGCYC	2 cut(s)	695, 1087
BarI	GAAGNNNNNNTAC	2 cut(s)	72, 104
BauI	CACGAG	3 cut(s)	67, 224, 906
BbsI	GAAGAC	1 cut(s)	242
Bbv12I	GWGCWC	4 cut(s)	686, 814, 1087, 1804
BbvCI	CCTCAGC	1 cut(s)	134
BbvI	GCAGC	4 cut(s)	497, 1088, 1250, 1664
BccI	CCATC	4 cut(s)	644, 650, 1622, 1790
BceAI	ACGGC	8 cut(s)	263, 326, 395, 619, 659, 854, 956, 1500
BcgI	CGANNNNNNTGC	4 cut(s)	794, 828, 1262, 1296
BciT130I	CCWGG	1 cut(s)	541
BclI	TGATCA	1 cut(s)	942
BcoDI	GTCTC	6 cut(s)	367, 376, 767, 884, 1034, 1754
BcuI	ACTAGT	1 cut(s)	1100
BfaI	CTAG	6 cut(s)	968, 1101, 1112, 1134, 1322, 1833
BfmI	CTRYAG	1 cut(s)	1821
BfoI	RGCGCY	2 cut(s)	30, 291
BfuAI	ACCTGC	1 cut(s)	749
BisI	GCNGC	9 cut(s)	34, 37, 433, 486, 525, 1077, 1239, 1348, 1653
BlsI	GCNGC	9 cut(s)	35, 38, 434, 487, 526, 1078, 1240, 1349, 1654
Bme1390I	CCNGG	1 cut(s)	541
Bme18I	GGWCC	4 cut(s)	160, 253, 335, 543
BmeRI	GACNNNNNGTC	1 cut(s)	607
BmeT110I	CYCGRG	1 cut(s)	1742
BmgBI	CACGTC	1 cut(s)	730
BmgT120I	GGNCC	5 cut(s)	160, 253, 335, 543, 1059
BmrFI	CCNGG	1 cut(s)	541
BmrI	ACTGGG	1 cut(s)	1456
BmsI	GCATC	7 cut(s)	53, 279, 669, 856, 1183, 1366, 1608
BmtI	GCTAGC	1 cut(s)	971
BmuI	ACTGGG	1 cut(s)	1456
BpiI	GAAGAC	1 cut(s)	242
BplI	GAGNNNNNCTC	2 cut(s)	127, 159
BpmI	CTGGAG	2 cut(s)	1101, 1194
Bpu10I	CCTNAGC	1 cut(s)	134
Bpu14I	TTCGAA	2 cut(s)	74, 589
BpuEI	CTTGAG	1 cut(s)	1170
Bsa29I	ATCGAT	1 cut(s)	1008
BsaAI	YACGTR	1 cut(s)	124
BsaHI	GRCGYC	2 cut(s)	288, 369
BsaI	GGTCTC	2 cut(s)	767, 884
BsaJI	CCNNGG	6 cut(s)	342, 831, 879, 936, 1175, 1574
BsaWI	WCCGGW	3 cut(s)	91, 162, 570
Bsc4I	CCNNNNNNNGG	4 cut(s)	29, 428, 454, 832
Bse118I	RCCGGY	3 cut(s)	162, 332, 1361
Bse1I	ACTGG	4 cut(s)	251, 313, 1211, 1451
Bse3DI	GCAATG	3 cut(s)	480, 711, 1149
BseBI	CCWGG	1 cut(s)	541
BseCI	ATCGAT	1 cut(s)	1008
BseDI	CCNNGG	6 cut(s)	342, 831, 879, 936, 1175, 1574
BseGI	GGATG	7 cut(s)	68, 495, 912, 1008, 1101, 1381, 1801
BseLI	CCNNNNNNNGG	4 cut(s)	29, 428, 454, 832
BseMI	GCAATG	3 cut(s)	480, 711, 1149
BseMII	CTCAG	1 cut(s)	125
BseNI	ACTGG	4 cut(s)	251, 313, 1211, 1451
BseRI	GAGGAG	5 cut(s)	70, 110, 491, 685, 1328
BseXI	GCAGC	4 cut(s)	497, 1088, 1250, 1664
BseYI	CCCAGC	1 cut(s)	111
BsgI	GTGCAG	1 cut(s)	1569
Bsh1236I	CGCG	8 cut(s)	151, 175, 214, 533, 535, 700, 816, 1481
Bsh1285I	CGRYCG	1 cut(s)	179
BshFI	GGCC	5 cut(s)	320, 476, 884, 1061, 1817
BshNI	GGYRCC	3 cut(s)	275, 287, 1561
BshTI	ACCGGT	1 cut(s)	162
BshVI	ATCGAT	1 cut(s)	1008
BsiEI	CGRYCG	1 cut(s)	179
BsiHKAI	GWGCWC	4 cut(s)	686, 814, 1087, 1804
BsiHKCI	CYCGRG	1 cut(s)	1742
BsiSI	CCGG	8 cut(s)	92, 146, 163, 291, 333, 366, 571, 1362
BsiWI	CGTACG	1 cut(s)	1342
BslFI	GGGAC	4 cut(s)	266, 321, 479, 1519
BslI	CCNNNNNNNGG	4 cut(s)	29, 428, 454, 832
BsmAI	GTCTC	6 cut(s)	367, 376, 767, 884, 1034, 1754
BsmBI	CGTCTC	4 cut(s)	367, 376, 1034, 1754
BsmFI	GGGAC	4 cut(s)	266, 321, 479, 1519
BsnI	GGCC	5 cut(s)	320, 476, 884, 1061, 1817
Bso31I	GGTCTC	2 cut(s)	767, 884
BsoBI	CYCGRG	1 cut(s)	1742
Bsp119I	TTCGAA	2 cut(s)	74, 589
Bsp1286I	GDGCHC	5 cut(s)	686, 695, 814, 1087, 1804
Bsp143I	GATC	4 cut(s)	942, 1005, 1515, 1767
Bsp19I	CCATGG	4 cut(s)	879, 936, 1175, 1574
BspANI	GGCC	5 cut(s)	320, 476, 884, 1061, 1817
BspCNI	CTCAG	1 cut(s)	126
BspDI	ATCGAT	1 cut(s)	1008
BspFNI	CGCG	8 cut(s)	151, 175, 214, 533, 535, 700, 816, 1481
BspHI	TCATGA	1 cut(s)	678
BspMI	ACCTGC	1 cut(s)	749
BspOI	GCTAGC	1 cut(s)	971
BspPI	GGATC	1 cut(s)	1523
BspT104I	TTCGAA	2 cut(s)	74, 589
BspT107I	GGYRCC	3 cut(s)	275, 287, 1561
BspTNI	GGTCTC	2 cut(s)	767, 884
BsrBI	CCGCTC	1 cut(s)	12
BsrDI	GCAATG	3 cut(s)	480, 711, 1149
BsrFI	RCCGGY	3 cut(s)	162, 332, 1361
BsrI	ACTGG	4 cut(s)	251, 313, 1211, 1451
BssAI	RCCGGY	3 cut(s)	162, 332, 1361
BssECI	CCNNGG	6 cut(s)	342, 831, 879, 936, 1175, 1574
BssMI	GATC	4 cut(s)	942, 1005, 1515, 1767
BssNI	GRCGYC	2 cut(s)	288, 369
BssSI	CACGAG	3 cut(s)	67, 224, 906
BssT1I	CCWWGG	4 cut(s)	879, 936, 1175, 1574
Bst2BI	CACGAG	3 cut(s)	67, 224, 906
Bst2UI	CCWGG	1 cut(s)	541
Bst4CI	ACNGT	5 cut(s)	598, 955, 1045, 1663, 1787
Bst6I	CTCTTC	4 cut(s)	47, 749, 848, 882
BstACI	GRCGYC	2 cut(s)	288, 369
BstBAI	YACGTR	1 cut(s)	124
BstBI	TTCGAA	2 cut(s)	74, 589
BstDEI	CTNAG	4 cut(s)	134, 449, 1734, 1779
BstDSI	CCRYGG	5 cut(s)	342, 879, 936, 1175, 1574
BstF5I	GGATG	7 cut(s)	68, 495, 912, 1008, 1101, 1381, 1801
BstFNI	CGCG	8 cut(s)	151, 175, 214, 533, 535, 700, 816, 1481
BstH2I	RGCGCY	2 cut(s)	30, 291
BstHHI	GCGC	8 cut(s)	29, 133, 151, 214, 290, 535, 702, 1481
BstKTI	GATC	4 cut(s)	945, 1008, 1518, 1770
BstMAI	GTCTC	6 cut(s)	367, 376, 767, 884, 1034, 1754
BstMBI	GATC	4 cut(s)	942, 1005, 1515, 1767
BstMCI	CGRYCG	1 cut(s)	179
BstNI	CCWGG	1 cut(s)	541
BstNSI	RCATGY	2 cut(s)	1168, 1703
BstSCI	CCNGG	1 cut(s)	539
BstSFI	CTRYAG	1 cut(s)	1821
BstSNI	TACGTA	1 cut(s)	124
BstUI	CGCG	8 cut(s)	151, 175, 214, 533, 535, 700, 816, 1481
BstV1I	GCAGC	4 cut(s)	497, 1088, 1250, 1664
BstV2I	GAAGAC	1 cut(s)	242
BstX2I	RGATCY	1 cut(s)	1515
BstXI	CCANNNNNNTGG	2 cut(s)	1069, 1554
BstYI	RGATCY	1 cut(s)	1515
Bsu15I	ATCGAT	1 cut(s)	1008
BsuRI	GGCC	5 cut(s)	320, 476, 884, 1061, 1817
BsuTUI	ATCGAT	1 cut(s)	1008
BtgI	CCRYGG	5 cut(s)	342, 879, 936, 1175, 1574
BtgZI	GCGATG	2 cut(s)	622, 1473
BtrI	CACGTC	1 cut(s)	730
BtsCI	GGATG	7 cut(s)	68, 495, 912, 1008, 1101, 1381, 1801
BtsI	GCAGTG	1 cut(s)	1329
BtsIMutI	CAGTG	4 cut(s)	306, 594, 951, 1329
BveI	ACCTGC	1 cut(s)	749
CaiI	CAGNNNCTG	1 cut(s)	1829
CciI	TCATGA	1 cut(s)	678
CfoI	GCGC	8 cut(s)	29, 133, 151, 214, 290, 535, 702, 1481
Cfr10I	RCCGGY	3 cut(s)	162, 332, 1361
Cfr13I	GGNCC	5 cut(s)	160, 253, 335, 543, 1059
ClaI	ATCGAT	1 cut(s)	1008
CseI	GACGC	3 cut(s)	181, 247, 358
Csp6I	GTAC	3 cut(s)	625, 1206, 1343
CspAI	ACCGGT	1 cut(s)	162
CviQI	GTAC	3 cut(s)	625, 1206, 1343
DdeI	CTNAG	4 cut(s)	134, 449, 1734, 1779
DinI	GGCGCC	1 cut(s)	289
DpnI	GATC	4 cut(s)	944, 1007, 1517, 1769
DpnII	GATC	4 cut(s)	942, 1005, 1515, 1767
DriI	GACNNNNNGTC	1 cut(s)	607
EaeI	YGGCCR	1 cut(s)	882
Eam1104I	CTCTTC	4 cut(s)	47, 749, 848, 882
Eam1105I	GACNNNNNGTC	1 cut(s)	607
EarI	CTCTTC	4 cut(s)	47, 749, 848, 882
EciI	GGCGGA	2 cut(s)	197, 364
Ecl136II	GAGCTC	1 cut(s)	1085
Eco105I	TACGTA	1 cut(s)	124
Eco130I	CCWWGG	4 cut(s)	879, 936, 1175, 1574
Eco147I	AGGCCT	1 cut(s)	1817
Eco24I	GRGCYC	2 cut(s)	695, 1087
Eco31I	GGTCTC	2 cut(s)	767, 884
Eco47I	GGWCC	4 cut(s)	160, 253, 335, 543
Eco47III	AGCGCT	1 cut(s)	28
Eco53kI	GAGCTC	1 cut(s)	1085
Eco57I	CTGAAG	2 cut(s)	1300, 1749
Eco88I	CYCGRG	1 cut(s)	1742
EcoICRI	GAGCTC	1 cut(s)	1085
EcoO109I	RGGNCCY	1 cut(s)	253
EcoRII	CCWGG	1 cut(s)	539
EcoT14I	CCWWGG	4 cut(s)	879, 936, 1175, 1574
EcoT38I	GRGCYC	2 cut(s)	695, 1087
EgeI	GGCGCC	1 cut(s)	289
EheI	GGCGCC	1 cut(s)	289
ErhI	CCWWGG	4 cut(s)	879, 936, 1175, 1574
Esp3I	CGTCTC	4 cut(s)	367, 376, 1034, 1754
FaqI	GGGAC	4 cut(s)	266, 321, 479, 1519
FauI	CCCGC	3 cut(s)	346, 421, 810
FauNDI	CATATG	1 cut(s)	1708
FbaI	TGATCA	1 cut(s)	942
FblI	GTMKAC	2 cut(s)	140, 600
Fnu4HI	GCNGC	9 cut(s)	34, 37, 433, 486, 525, 1077, 1239, 1348, 1653
FokI	GGATG	7 cut(s)	75, 482, 899, 1015, 1108, 1388, 1808
FriOI	GRGCYC	2 cut(s)	695, 1087
Fsp4HI	GCNGC	9 cut(s)	34, 37, 433, 486, 525, 1077, 1239, 1348, 1653
FspBI	CTAG	6 cut(s)	968, 1101, 1112, 1134, 1322, 1833
GlaI	GCGC	8 cut(s)	28, 132, 150, 213, 289, 534, 701, 1480
GluI	GCNGC	9 cut(s)	34, 37, 433, 486, 525, 1077, 1239, 1348, 1653
GsaI	CCCAGC	1 cut(s)	115
GsuI	CTGGAG	2 cut(s)	1101, 1194
HaeII	RGCGCY	2 cut(s)	30, 291
HaeIII	GGCC	5 cut(s)	320, 476, 884, 1061, 1817
HapII	CCGG	8 cut(s)	92, 146, 163, 291, 333, 366, 571, 1362
HgaI	GACGC	3 cut(s)	181, 247, 358
HhaI	GCGC	8 cut(s)	29, 133, 151, 214, 290, 535, 702, 1481
Hin1I	GRCGYC	2 cut(s)	288, 369
Hin6I	GCGC	8 cut(s)	27, 131, 149, 212, 288, 533, 700, 1479
HinP1I	GCGC	8 cut(s)	27, 131, 149, 212, 288, 533, 700, 1479
HincII	GTYRAC	2 cut(s)	141, 601
HindII	GTYRAC	2 cut(s)	141, 601
HindIII	AAGCTT	1 cut(s)	1550
HinfI	GANTC	9 cut(s)	98, 142, 312, 418, 591, 898, 1543, 1634, 1724
HpaII	CCGG	8 cut(s)	92, 146, 163, 291, 333, 366, 571, 1362
HphI	GGTGA	6 cut(s)	547, 757, 937, 952, 1255, 1643
Hpy166II	GTNNAC	5 cut(s)	141, 601, 727, 1659, 1678
Hpy188I	TCNGA	2 cut(s)	613, 1729
Hpy188III	TCNNGA	5 cut(s)	106, 169, 415, 679, 908
Hpy8I	GTNNAC	5 cut(s)	141, 601, 727, 1659, 1678
Hpy99I	CGWCG	5 cut(s)	362, 416, 605, 1277, 1486
HpyAV	CCTTC	4 cut(s)	202, 1267, 1298, 1766
HpyCH4III	ACNGT	5 cut(s)	598, 955, 1045, 1663, 1787
HpyCH4IV	ACGT	5 cut(s)	123, 357, 729, 855, 1275
HpyF3I	CTNAG	4 cut(s)	134, 449, 1734, 1779
HpySE526I	ACGT	5 cut(s)	123, 357, 729, 855, 1275
Hsp92I	GRCGYC	2 cut(s)	288, 369
HspAI	GCGC	8 cut(s)	27, 131, 149, 212, 288, 533, 700, 1479
KasI	GGCGCC	1 cut(s)	287
Ksp22I	TGATCA	1 cut(s)	942
Kzo9I	GATC	4 cut(s)	942, 1005, 1515, 1767
LmnI	GCTCC	8 cut(s)	5, 193, 216, 457, 698, 1024, 1082, 1492
Lsp1109I	GCAGC	4 cut(s)	497, 1088, 1250, 1664
LweI	GCATC	7 cut(s)	53, 279, 669, 856, 1183, 1366, 1608
MaeI	CTAG	6 cut(s)	968, 1101, 1112, 1134, 1322, 1833
MaeII	ACGT	5 cut(s)	123, 357, 729, 855, 1275
MaeIII	GTNAC	5 cut(s)	395, 908, 973, 1357, 1366
MalI	GATC	4 cut(s)	944, 1007, 1517, 1769
MbiI	CCGCTC	1 cut(s)	12
MboI	GATC	4 cut(s)	942, 1005, 1515, 1767
MfeI	CAATTG	2 cut(s)	1428, 1593
MflI	RGATCY	1 cut(s)	1515
MhlI	GDGCHC	5 cut(s)	686, 695, 814, 1087, 1804
MluCI	AATT	3 cut(s)	118, 1428, 1593
Mly113I	GGCGCC	1 cut(s)	288
MlyI	GAGTC	4 cut(s)	107, 136, 1552, 1718
MmeI	TCCRAC	2 cut(s)	591, 838
MroXI	GAANNNNTTC	1 cut(s)	84
MseI	TTAA	1 cut(s)	1837
MslI	CAYNNNNRTG	1 cut(s)	1409
MspA1I	CMGCKG	2 cut(s)	1079, 1247
MspI	CCGG	8 cut(s)	92, 146, 163, 291, 333, 366, 571, 1362
MspR9I	CCNGG	1 cut(s)	541
MunI	CAATTG	2 cut(s)	1428, 1593
MvaI	CCWGG	1 cut(s)	541
MvnI	CGCG	8 cut(s)	151, 175, 214, 533, 535, 700, 816, 1481
NarI	GGCGCC	1 cut(s)	288
NcoI	CCATGG	4 cut(s)	879, 936, 1175, 1574
NdeI	CATATG	1 cut(s)	1708
NdeII	GATC	4 cut(s)	942, 1005, 1515, 1767
NheI	GCTAGC	1 cut(s)	967
NmeAIII	GCCGAG	1 cut(s)	812
NmuCI	GTSAC	3 cut(s)	908, 973, 1366
NspI	RCATGY	2 cut(s)	1168, 1703
NspV	TTCGAA	2 cut(s)	74, 589
PaeI	GCATGC	1 cut(s)	1703
PaeR7I	CTCGAG	1 cut(s)	1742
PagI	TCATGA	1 cut(s)	678
PceI	AGGCCT	1 cut(s)	1817
PciI	ACATGT	1 cut(s)	1164
PcsI	WCGNNNNNNNCGW	3 cut(s)	366, 420, 1005
PdmI	GAANNNNTTC	1 cut(s)	84
PfeI	GAWTC	5 cut(s)	312, 418, 591, 898, 1634
Pfl23II	CGTACG	1 cut(s)	1342
PflFI	GACNNNGTC	1 cut(s)	175
PfoI	TCCNGGA	1 cut(s)	539
PinAI	ACCGGT	1 cut(s)	162
PkrI	GCNGC	9 cut(s)	35, 38, 434, 487, 526, 1078, 1240, 1349, 1654
PleI	GAGTC	4 cut(s)	106, 136, 1551, 1718
PluTI	GGCGCC	1 cut(s)	291
PpsI	GAGTC	4 cut(s)	106, 136, 1551, 1718
Ppu21I	YACGTR	1 cut(s)	124
PpuMI	RGGWCCY	1 cut(s)	253
PscI	ACATGT	1 cut(s)	1164
Psp124BI	GAGCTC	1 cut(s)	1087
Psp5II	RGGWCCY	1 cut(s)	253
Psp6I	CCWGG	1 cut(s)	539
PspFI	CCCAGC	1 cut(s)	111
PspGI	CCWGG	1 cut(s)	539
PspLI	CGTACG	1 cut(s)	1342
PspPI	GGNCC	5 cut(s)	160, 253, 335, 543, 1059
PspPPI	RGGWCCY	1 cut(s)	253
PspXI	VCTCGAGB	1 cut(s)	1742
PstNI	CAGNNNCTG	1 cut(s)	1829
PsuI	RGATCY	1 cut(s)	1515
PsyI	GACNNNGTC	1 cut(s)	175
PvuII	CAGCTG	2 cut(s)	1079, 1247
RsaI	GTAC	3 cut(s)	626, 1207, 1344
RsaNI	GTAC	3 cut(s)	625, 1206, 1343
RseI	CAYNNNNRTG	1 cut(s)	1409
SacI	GAGCTC	1 cut(s)	1087
SalI	GTCGAC	2 cut(s)	139, 599
SaqAI	TTAA	1 cut(s)	1837
SatI	GCNGC	9 cut(s)	34, 37, 433, 486, 525, 1077, 1239, 1348, 1653
Sau3AI	GATC	4 cut(s)	942, 1005, 1515, 1767
Sau96I	GGNCC	5 cut(s)	160, 253, 335, 543, 1059
SchI	GAGTC	4 cut(s)	107, 136, 1552, 1718
ScrFI	CCNGG	1 cut(s)	541
SduI	GDGCHC	5 cut(s)	686, 695, 814, 1087, 1804
SfaNI	GCATC	7 cut(s)	53, 279, 669, 856, 1183, 1366, 1608
SfcI	CTRYAG	1 cut(s)	1821
SfoI	GGCGCC	1 cut(s)	289
Sfr274I	CTCGAG	1 cut(s)	1742
SfuI	TTCGAA	2 cut(s)	74, 589
SinI	GGWCC	4 cut(s)	160, 253, 335, 543
SlaI	CTCGAG	1 cut(s)	1742
SmiMI	CAYNNNNRTG	1 cut(s)	1409
SmlI	CTYRAG	2 cut(s)	1185, 1742
SmoI	CTYRAG	2 cut(s)	1185, 1742
SnaBI	TACGTA	1 cut(s)	124
SpeI	ACTAGT	1 cut(s)	1100
SphI	GCATGC	1 cut(s)	1703
Sse9I	AATT	3 cut(s)	118, 1428, 1593
SseBI	AGGCCT	1 cut(s)	1817
SspDI	GGCGCC	1 cut(s)	287
SspI	AATATT	1 cut(s)	297
SspMI	CTAG	6 cut(s)	968, 1101, 1112, 1134, 1322, 1833
SstI	GAGCTC	1 cut(s)	1087
StuI	AGGCCT	1 cut(s)	1817
StyD4I	CCNGG	1 cut(s)	539
StyI	CCWWGG	4 cut(s)	879, 936, 1175, 1574
TaaI	ACNGT	5 cut(s)	598, 955, 1045, 1663, 1787
TaiI	ACGT	5 cut(s)	126, 360, 732, 858, 1278
TasI	AATT	3 cut(s)	118, 1428, 1593
TauI	GCSGC	5 cut(s)	36, 39, 435, 527, 1350
TfiI	GAWTC	5 cut(s)	312, 418, 591, 898, 1634
Tru1I	TTAA	1 cut(s)	1837
Tru9I	TTAA	1 cut(s)	1837
TscAI	CASTG	4 cut(s)	313, 601, 958, 1336
TseFI	GTSAC	3 cut(s)	908, 973, 1366
TseI	GCWGC	4 cut(s)	485, 1076, 1238, 1652
Tsp45I	GTSAC	3 cut(s)	908, 973, 1366
TspDTI	ATGAA	5 cut(s)	221, 245, 736, 1300, 1695
TspGWI	ACGGA	2 cut(s)	206, 1388
TspRI	CASTG	4 cut(s)	313, 601, 958, 1336
Tth111I	GACNNNGTC	1 cut(s)	175
VpaK11BI	GGWCC	4 cut(s)	160, 253, 335, 543
XceI	RCATGY	2 cut(s)	1168, 1703
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1572
XhoI	CTCGAG	1 cut(s)	1742
XmiI	GTMKAC	2 cut(s)	140, 600
XmnI	GAANNNNTTC	1 cut(s)	84
XspI	CTAG	6 cut(s)	968, 1101, 1112, 1134, 1322, 1833

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.