Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr7

Orthogroup ID

OG0002369

Physical Location & Seq

Genomic Coordinates Forward (+)

12132538 .. 12136429

Gene Structure 3892 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000032214

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1902 bp

ATGGAGTGGGACCCCACTGAAGATCAAACGGCCCAAAATCAACGGCTTTTTACTAGCGAATCAACAAGGATGGGGATGAGCGGAACGGAACCGAGCGGCGGCGGCGAGGGACTGAAGAGGAGGGGGTGTTCGTGCGGAAAGAACGATTTTCTCCCGGAGGAGTCGTTCGAGAGCTGGGGCAATTACGCCAATGCGCTCCGGTCGACTCCGGCTAGGTTCAAGGACCGGTTCTTCACGCGGTCCTCTGACAGCACCGAGCTGGTGGAGGTGAAGGCGCGGAGCCAGCACGAGATGAAGAAGACGCTTACCTGGTGGGACCTCATCTGGTTCGGGCTCGGAGCCGTCATAGGCGCCGGAATCTTCGTCCTTACTGGACTCGAGGCCAAGAAACACGCCGGACCCGCCGTCGTCATGTCCTACGTCGTCTCCGGCGTCTCCGCCTTGCTCTCTGTTTTCTGTTACACAGAGTTCGCCGTCGAGATTCCCGTTGCAGGCGGCTCATTTGCCTACCTAAGAGTGGAGCTTGGGGACTTCGTGGCCTACATTGCAGCAGGTAACATCCTTCTCGAATATGTCATAGGCGGGGCGGCCGTTGCGCGTTCGTGGACCTCCTACTTCACCTCCCTATGCAACCAGGACGATTCCAATGCTTTCCGAATCACTGTCCACGGTTGGTCGGAGGACTACAAGTACCTGGACCCCATCGCCATTGGGGTTATCATCTTTATCTGCATACTCGCCGTCTTGAGCACAAAGGGCTCCTCGCGCCTCAACTACGTCGCCTCCATAGTCCACGTTATCGTCATTCTCTTCATCATCATAGCAGGTCTCACCAAAGCAGATACTAACAACTACAAGGATTTTGCCCCACATGGTGCTCGCGGCGTGTTCCAAGCCTCCGCAGTTCTCTTCTTTGCATACGTTGGATTTGACGCCGTTTCAACCATGGCCGAAGAGACCAAGAATCCTGCTCGAGACATCCCAATAGGGCTGGTTGGGTCCATGGTGATCACCACCACTCTTTATTGCTTGCTAGCCGTGACACTCTGCCTTATGGTACCATTTCAGGTAATTGATGAGGACGCTCCATTTTCAAAAGCGTTTGAGACAGTTGGTATGGGTTGGGCCAAGTATGTGGTTGCAGCTGGAGCTCTAAAAGGCATGACTAGTGTTTTGCTCGTCGGGGCAGTGGGTCAGGCTCGGTATTTGACCCACATTGCCCGAACCCACATGATGCCCCCATGGTTTGCTCATGTTGATGCCAAGACAGGTACTCCAGTCAATGCCACAATTGTCATGCTCGCAGCCACAGCTGTAATCGCTTTCTTCACCAGCCTCAACGTTCTTGCTAACCTTCTCTCCATTTCTACGCTATTCATCTTCAGCCTCGTTGCCATTGCTCTACTCGTACGCCGTTACTATGTAACCGGTGTGACCACGGATGCAAACAGGAATAAGCTCATACTGTGCATTGTTATGATACTCGGGGGTGCAGTTGCCACTTCTGCTTACTGGGGTGTCAGCCATGATTGGGTAGGGTATTGCGTGACGGCTCCTATTTGGTTCTTGGGGACTTTGGGGATTTGGTTTCTTGTTCCGCAAGCAAGGAGTCCAAAGCTTTGGGGGGTGCCATTGGTTCCATGGTTGCCTTCACTTTCGATTGGCATCAACATTTTCTTGCTTGGTTCGATTGATGGTGCTTCTTTTGTCAGGTTTGCAGTATGGACTGTGATTATCTTGGTTTACTACATTTTCTTTGGGTTGCATGCTTCATATGACACAGCAAAGGACTCTGAAGCTAAGAGGCTCGAGGGTGGGAAATACGAGACGAAGGTTGAAGGAACCAAGGACTCTGGTTTGGATGGTGCGTATAGCAAGGCCTCAACAGAACCTGCTAGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005623 GO:0005886 GO:0016020 GO:0044464 GO:0071944

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AA_permease_2 AA_permease_C

Protein Analysis

634

Amino Acids

68.69

Weight (kDa)

6.39

Isoelectric Point (pI)

32.43

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AA_permease_2	PF13520	102 - 501	3.2e-51	Amino acid permease
AA_permease	PF00324	107 - 472	8.5e-35	Amino acid permease
AA_permease_C	PF13906	541 - 591	1.6e-17	C-terminus of AA_permease

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002369)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G21120 AT4G21120
fragaria_vesca	FvH4_3g09930 FvH4_3g09940
malus_domestica	MD05G1274600.v1.1 MD05G1274700.v1.1 MD05G1274900.v1.1 MD10G1254300.v1.1
prunus_persica	Prupe.4G089000_v2.0.a1 Prupe.4G089100_v2.0.a1
pyrus_communis	pycom05g25610 pycom05g25630 pycom10g21000
rosa_chinensis	RchiOBHm_Chr5g0015621 RchiOBHm_Chr5g0015661 RchiOBHm_Chr5g0015691 RchiOBHm_Chr5g0015791
rosa_laevigata	RLG00000032214 RLG00000032217 RLG00000032219
rosa_multiflora	Rmu_sc0000843.1_g000004 Rmu_sc0000843.1_g000008 Rmu_sc0003230.1_g000003 Rmu_sc0003230.1_g000005
rosa_roxburghii	Rroxscaffold_1G00060830
rosa_rugosa	Rorug01G0078300 Rorug05G0029000 Rorug05G0029100
rosa_samantha	Rh5AG122300 Rh5AG122400 Rh5AG122600 Rh5BG120900 Rh5BG121200 Rh5BG121700 Rh5CG131300 Rh5CG131900 Rh5CG132800 Rh5DG119900 Rh5DG120600
rosa_wichuraiana	Rw5G010550 Rw5G010560 Rw5G010570

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	542, 815
Acc65I	GGTACC	1 cut(s)	1057
AccB1I	GGYRCC	3 cut(s)	350, 1057, 1627
AccBSI	CCGCTC	2 cut(s)	81, 96
AccI	GTMKAC	1 cut(s)	203
AccII	CGCG	5 cut(s)	238, 277, 598, 766, 882
AclI	AACGTT	1 cut(s)	1341
AcoI	YGGCCR	2 cut(s)	588, 948
AcuI	CTGAAG	4 cut(s)	39, 134, 1366, 1815
AcyI	GRCGYC	3 cut(s)	351, 432, 933
AdeI	CACNNNGTG	1 cut(s)	875
AfaI	GTAC	4 cut(s)	692, 1059, 1273, 1410
AfiI	CCNNNNNNNGG	4 cut(s)	98, 491, 517, 1531
AgeI	ACCGGT	2 cut(s)	225, 1427
AgsI	TTSAA	4 cut(s)	220, 942, 1095, 1838
AhdI	GACNNNNNGTC	1 cut(s)	404
AhlI	ACTAGT	1 cut(s)	1166
AjnI	CCWGG	3 cut(s)	308, 633, 693
AloI	GAACNNNNNNTCC	4 cut(s)	112, 144, 149, 181
AluBI	AGCT	9 cut(s)	174, 259, 523, 1145, 1151, 1313, 1459, 1618, 1799
AluI	AGCT	9 cut(s)	174, 259, 523, 1145, 1151, 1313, 1459, 1618, 1799
Alw21I	GWGCWC	3 cut(s)	752, 880, 1153
Alw26I	GTCTC	7 cut(s)	430, 439, 833, 950, 969, 1100, 1820
AlwNI	CAGNNNCTG	1 cut(s)	1892
Ama87I	CYCGRG	4 cut(s)	377, 972, 1484, 1808
AoxI	GGCC	7 cut(s)	30, 381, 537, 588, 948, 1125, 1878
ApeKI	GCWGC	3 cut(s)	548, 1142, 1304
ArsI	GACNNNNNNTTYG	2 cut(s)	1156, 1188
AsiGI	ACCGGT	2 cut(s)	225, 1427
Asp718I	GGTACC	1 cut(s)	1057
AspLEI	GCGC	5 cut(s)	196, 277, 353, 598, 768
AsuC2I	CCSGG	1 cut(s)	155
AsuHPI	GGTGA	6 cut(s)	280, 610, 823, 1003, 1018, 1321
AsuNHI	GCTAGC	1 cut(s)	1033
AvaI	CYCGRG	4 cut(s)	377, 972, 1484, 1808
AvaII	GGWCC	8 cut(s)	10, 223, 240, 316, 398, 606, 697, 999
BaeI	ACNNNNGTAYC	2 cut(s)	1263, 1296
BanI	GGYRCC	3 cut(s)	350, 1057, 1627
BanII	GRGCYC	3 cut(s)	336, 761, 1153
BauI	CACGAG	1 cut(s)	287
BbsI	GAAGAC	1 cut(s)	305
Bbv12I	GWGCWC	3 cut(s)	752, 880, 1153
BbvI	GCAGC	3 cut(s)	560, 1154, 1316
BccI	CCATC	4 cut(s)	64, 710, 1688, 1856
BcgI	CGANNNNNNTGC	2 cut(s)	629, 663
BciT130I	CCWGG	3 cut(s)	310, 635, 695
BclI	TGATCA	1 cut(s)	1008
BcnI	CCSGG	1 cut(s)	155
BcoDI	GTCTC	7 cut(s)	430, 439, 833, 950, 969, 1100, 1820
BcuI	ACTAGT	1 cut(s)	1166
BfaI	CTAG	5 cut(s)	54, 213, 1034, 1167, 1896
BfoI	RGCGCY	1 cut(s)	354
BfuAI	ACCTGC	2 cut(s)	542, 815
BisI	GCNGC	9 cut(s)	97, 100, 103, 496, 549, 588, 883, 1143, 1305
BlsI	GCNGC	9 cut(s)	98, 101, 104, 497, 550, 589, 884, 1144, 1306
Bme1390I	CCNGG	4 cut(s)	155, 310, 635, 695
Bme18I	GGWCC	8 cut(s)	10, 223, 240, 316, 398, 606, 697, 999
BmeRI	GACNNNNNGTC	1 cut(s)	404
BmeT110I	CYCGRG	4 cut(s)	377, 972, 1484, 1808
BmrFI	CCNGG	4 cut(s)	155, 310, 635, 695
BmrI	ACTGGG	1 cut(s)	1522
BmsI	GCATC	4 cut(s)	1224, 1249, 1432, 1674
BmtI	GCTAGC	1 cut(s)	1037
BmuI	ACTGGG	1 cut(s)	1522
BpiI	GAAGAC	1 cut(s)	305
BpmI	CTGGAG	2 cut(s)	1167, 1260
BpuEI	CTTGAG	1 cut(s)	766
BpuMI	CCSGG	1 cut(s)	155
BsaBI	GATNNNNATC	1 cut(s)	1664
BsaHI	GRCGYC	3 cut(s)	351, 432, 933
BsaI	GGTCTC	2 cut(s)	833, 950
BsaJI	CCNNGG	7 cut(s)	667, 945, 1002, 1241, 1437, 1640, 1845
BsaWI	WCCGGW	3 cut(s)	198, 225, 1427
Bsc4I	CCNNNNNNNGG	4 cut(s)	98, 491, 517, 1531
Bse118I	RCCGGY	2 cut(s)	225, 1427
Bse1I	ACTGG	3 cut(s)	376, 1277, 1517
Bse3DI	GCAATG	3 cut(s)	543, 1215, 1395
Bse8I	GATNNNNATC	1 cut(s)	1664
BseBI	CCWGG	3 cut(s)	310, 635, 695
BseDI	CCNNGG	7 cut(s)	667, 945, 1002, 1241, 1437, 1640, 1845
BseGI	GGATG	6 cut(s)	75, 81, 558, 978, 1447, 1867
BseJI	GATNNNNATC	1 cut(s)	1664
BseLI	CCNNNNNNNGG	4 cut(s)	98, 491, 517, 1531
BseMI	GCAATG	3 cut(s)	543, 1215, 1395
BseNI	ACTGG	3 cut(s)	376, 1277, 1517
BseRI	GAGGAG	3 cut(s)	133, 173, 751
BseX3I	CGGCCG	1 cut(s)	588
BseXI	GCAGC	3 cut(s)	560, 1154, 1316
BseYI	CCCAGC	1 cut(s)	174
BsgI	GTGCAG	1 cut(s)	1512
Bsh1236I	CGCG	5 cut(s)	238, 277, 598, 766, 882
Bsh1285I	CGRYCG	2 cut(s)	203, 591
BshFI	GGCC	7 cut(s)	32, 383, 539, 590, 950, 1127, 1880
BshNI	GGYRCC	3 cut(s)	350, 1057, 1627
BshTI	ACCGGT	2 cut(s)	225, 1427
BsiEI	CGRYCG	2 cut(s)	203, 591
BsiHKAI	GWGCWC	3 cut(s)	752, 880, 1153
BsiHKCI	CYCGRG	4 cut(s)	377, 972, 1484, 1808
BsiSI	CCGG	8 cut(s)	155, 199, 209, 226, 354, 396, 429, 1428
BsiWI	CGTACG	1 cut(s)	1408
BslFI	GGGAC	5 cut(s)	23, 123, 329, 542, 1585
BslI	CCNNNNNNNGG	4 cut(s)	98, 491, 517, 1531
BsmAI	GTCTC	7 cut(s)	430, 439, 833, 950, 969, 1100, 1820
BsmBI	CGTCTC	3 cut(s)	430, 439, 1820
BsmFI	GGGAC	5 cut(s)	23, 123, 329, 542, 1585
BsnI	GGCC	7 cut(s)	32, 383, 539, 590, 950, 1127, 1880
Bso31I	GGTCTC	2 cut(s)	833, 950
BsoBI	CYCGRG	4 cut(s)	377, 972, 1484, 1808
Bsp1286I	GDGCHC	5 cut(s)	336, 752, 761, 880, 1153
Bsp143I	GATC	2 cut(s)	22, 1008
Bsp19I	CCATGG	4 cut(s)	945, 1002, 1241, 1640
BspANI	GGCC	7 cut(s)	32, 383, 539, 590, 950, 1127, 1880
BspFNI	CGCG	5 cut(s)	238, 277, 598, 766, 882
BspMI	ACCTGC	2 cut(s)	542, 815
BspOI	GCTAGC	1 cut(s)	1037
BspT107I	GGYRCC	3 cut(s)	350, 1057, 1627
BspTNI	GGTCTC	2 cut(s)	833, 950
BsrBI	CCGCTC	2 cut(s)	81, 96
BsrDI	GCAATG	3 cut(s)	543, 1215, 1395
BsrFI	RCCGGY	2 cut(s)	225, 1427
BsrI	ACTGG	3 cut(s)	376, 1277, 1517
BssAI	RCCGGY	2 cut(s)	225, 1427
BssECI	CCNNGG	7 cut(s)	667, 945, 1002, 1241, 1437, 1640, 1845
BssMI	GATC	2 cut(s)	22, 1008
BssNI	GRCGYC	3 cut(s)	351, 432, 933
BssSI	CACGAG	1 cut(s)	287
BssT1I	CCWWGG	5 cut(s)	945, 1002, 1241, 1640, 1845
Bst2BI	CACGAG	1 cut(s)	287
Bst2UI	CCWGG	3 cut(s)	310, 635, 695
Bst4CI	ACNGT	5 cut(s)	664, 671, 1111, 1467, 1729
Bst6I	CTCTTC	4 cut(s)	110, 815, 914, 948
BstACI	GRCGYC	3 cut(s)	351, 432, 933
BstC8I	GCNNGC	8 cut(s)	284, 493, 880, 1031, 1035, 1302, 1602, 1767
BstDEI	CTNAG	2 cut(s)	512, 1800
BstDSI	CCRYGG	6 cut(s)	667, 945, 1002, 1241, 1437, 1640
BstF5I	GGATG	6 cut(s)	75, 81, 558, 978, 1447, 1867
BstFNI	CGCG	5 cut(s)	238, 277, 598, 766, 882
BstH2I	RGCGCY	1 cut(s)	354
BstHHI	GCGC	5 cut(s)	196, 277, 353, 598, 768
BstKTI	GATC	2 cut(s)	25, 1011
BstMAI	GTCTC	7 cut(s)	430, 439, 833, 950, 969, 1100, 1820
BstMBI	GATC	2 cut(s)	22, 1008
BstMCI	CGRYCG	2 cut(s)	203, 591
BstNI	CCWGG	3 cut(s)	310, 635, 695
BstNSI	RCATGY	1 cut(s)	1769
BstSCI	CCNGG	4 cut(s)	153, 308, 633, 693
BstUI	CGCG	5 cut(s)	238, 277, 598, 766, 882
BstV1I	GCAGC	3 cut(s)	560, 1154, 1316
BstV2I	GAAGAC	1 cut(s)	305
BstXI	CCANNNNNNTGG	2 cut(s)	1135, 1620
BstZI	CGGCCG	1 cut(s)	588
BsuRI	GGCC	7 cut(s)	32, 383, 539, 590, 950, 1127, 1880
BtgI	CCRYGG	6 cut(s)	667, 945, 1002, 1241, 1437, 1640
BtgZI	GCGATG	1 cut(s)	688
BtsCI	GGATG	6 cut(s)	75, 81, 558, 978, 1447, 1867
BtsI	GCAGTG	1 cut(s)	1194
BtsIMutI	CAGTG	3 cut(s)	15, 660, 1194
BveI	ACCTGC	2 cut(s)	542, 815
Cac8I	GCNNGC	8 cut(s)	284, 493, 880, 1031, 1035, 1302, 1602, 1767
CaiI	CAGNNNCTG	1 cut(s)	1892
CfoI	GCGC	5 cut(s)	196, 277, 353, 598, 768
Cfr10I	RCCGGY	2 cut(s)	225, 1427
CseI	GACGC	4 cut(s)	310, 421, 941, 1091
CsiI	ACCWGGT	1 cut(s)	308
Csp6I	GTAC	4 cut(s)	691, 1058, 1272, 1409
CspAI	ACCGGT	2 cut(s)	225, 1427
CviQI	GTAC	4 cut(s)	691, 1058, 1272, 1409
DdeI	CTNAG	2 cut(s)	512, 1800
DinI	GGCGCC	1 cut(s)	352
DpnI	GATC	2 cut(s)	24, 1010
DpnII	GATC	2 cut(s)	22, 1008
DraIII	CACNNNGTG	1 cut(s)	875
DriI	GACNNNNNGTC	1 cut(s)	404
EaeI	YGGCCR	2 cut(s)	588, 948
EagI	CGGCCG	1 cut(s)	588
Eam1104I	CTCTTC	4 cut(s)	110, 815, 914, 948
Eam1105I	GACNNNNNGTC	1 cut(s)	404
EarI	CTCTTC	4 cut(s)	110, 815, 914, 948
EciI	GGCGGA	1 cut(s)	427
Ecl136II	GAGCTC	1 cut(s)	1151
EclXI	CGGCCG	1 cut(s)	588
Eco130I	CCWWGG	5 cut(s)	945, 1002, 1241, 1640, 1845
Eco147I	AGGCCT	1 cut(s)	1880
Eco24I	GRGCYC	3 cut(s)	336, 761, 1153
Eco31I	GGTCTC	2 cut(s)	833, 950
Eco47I	GGWCC	8 cut(s)	10, 223, 240, 316, 398, 606, 697, 999
Eco52I	CGGCCG	1 cut(s)	588
Eco53kI	GAGCTC	1 cut(s)	1151
Eco57I	CTGAAG	4 cut(s)	39, 134, 1366, 1815
Eco88I	CYCGRG	4 cut(s)	377, 972, 1484, 1808
EcoICRI	GAGCTC	1 cut(s)	1151
EcoO109I	RGGNCCY	2 cut(s)	10, 316
EcoRII	CCWGG	3 cut(s)	308, 633, 693
EcoT14I	CCWWGG	5 cut(s)	945, 1002, 1241, 1640, 1845
EcoT38I	GRGCYC	3 cut(s)	336, 761, 1153
EgeI	GGCGCC	1 cut(s)	352
EheI	GGCGCC	1 cut(s)	352
ErhI	CCWWGG	5 cut(s)	945, 1002, 1241, 1640, 1845
Esp3I	CGTCTC	3 cut(s)	430, 439, 1820
FaqI	GGGAC	5 cut(s)	23, 123, 329, 542, 1585
FauI	CCCGC	2 cut(s)	409, 575
FauNDI	CATATG	1 cut(s)	1774
FbaI	TGATCA	1 cut(s)	1008
FblI	GTMKAC	1 cut(s)	203
Fnu4HI	GCNGC	9 cut(s)	97, 100, 103, 496, 549, 588, 883, 1143, 1305
FokI	GGATG	6 cut(s)	82, 88, 545, 965, 1454, 1874
FriOI	GRGCYC	3 cut(s)	336, 761, 1153
Fsp4HI	GCNGC	9 cut(s)	97, 100, 103, 496, 549, 588, 883, 1143, 1305
FspBI	CTAG	5 cut(s)	54, 213, 1034, 1167, 1896
GlaI	GCGC	5 cut(s)	195, 276, 352, 597, 767
GluI	GCNGC	9 cut(s)	97, 100, 103, 496, 549, 588, 883, 1143, 1305
GsaI	CCCAGC	1 cut(s)	178
GsuI	CTGGAG	2 cut(s)	1167, 1260
HaeII	RGCGCY	1 cut(s)	354
HaeIII	GGCC	7 cut(s)	32, 383, 539, 590, 950, 1127, 1880
HapII	CCGG	8 cut(s)	155, 199, 209, 226, 354, 396, 429, 1428
HgaI	GACGC	4 cut(s)	310, 421, 941, 1091
HhaI	GCGC	5 cut(s)	196, 277, 353, 598, 768
Hin1I	GRCGYC	3 cut(s)	351, 432, 933
Hin6I	GCGC	5 cut(s)	194, 275, 351, 596, 766
HinP1I	GCGC	5 cut(s)	194, 275, 351, 596, 766
HincII	GTYRAC	1 cut(s)	204
HindII	GTYRAC	1 cut(s)	204
HindIII	AAGCTT	1 cut(s)	1616
HpaII	CCGG	8 cut(s)	155, 199, 209, 226, 354, 396, 429, 1428
HphI	GGTGA	6 cut(s)	280, 610, 823, 1003, 1018, 1321
Hpy166II	GTNNAC	5 cut(s)	204, 606, 667, 793, 1744
Hpy188I	TCNGA	5 cut(s)	247, 338, 656, 679, 1795
Hpy188III	TCNNGA	5 cut(s)	169, 478, 566, 745, 974
Hpy8I	GTNNAC	5 cut(s)	204, 606, 667, 793, 1744
Hpy99I	CGWCG	5 cut(s)	410, 425, 479, 782, 1184
HpyAV	CCTTC	6 cut(s)	265, 572, 1364, 1659, 1825, 1832
HpyCH4III	ACNGT	5 cut(s)	664, 671, 1111, 1467, 1729
HpyCH4IV	ACGT	5 cut(s)	420, 777, 795, 921, 1341
HpyF3I	CTNAG	2 cut(s)	512, 1800
HpySE526I	ACGT	5 cut(s)	420, 777, 795, 921, 1341
Hsp92I	GRCGYC	3 cut(s)	351, 432, 933
HspAI	GCGC	5 cut(s)	194, 275, 351, 596, 766
KasI	GGCGCC	1 cut(s)	350
KflI	GGGWCCC	1 cut(s)	10
KpnI	GGTACC	1 cut(s)	1061
Ksp22I	TGATCA	1 cut(s)	1008
Kzo9I	GATC	2 cut(s)	22, 1008
LmnI	GCTCC	8 cut(s)	201, 279, 338, 520, 764, 1090, 1148, 1558
Lsp1109I	GCAGC	3 cut(s)	560, 1154, 1316
LweI	GCATC	4 cut(s)	1224, 1249, 1432, 1674
MabI	ACCWGGT	1 cut(s)	308
MaeI	CTAG	5 cut(s)	54, 213, 1034, 1167, 1896
MaeII	ACGT	5 cut(s)	420, 777, 795, 921, 1341
MaeIII	GTNAC	7 cut(s)	458, 554, 1039, 1415, 1423, 1432, 1546
MalI	GATC	2 cut(s)	24, 1010
MbiI	CCGCTC	2 cut(s)	81, 96
MboI	GATC	2 cut(s)	22, 1008
MfeI	CAATTG	1 cut(s)	1290
MhlI	GDGCHC	5 cut(s)	336, 752, 761, 880, 1153
MluCI	AATT	3 cut(s)	181, 1071, 1290
Mly113I	GGCGCC	1 cut(s)	351
MlyI	GAGTC	6 cut(s)	170, 199, 369, 1618, 1784, 1844
MmeI	TCCRAC	2 cut(s)	657, 904
MseI	TTAA	1 cut(s)	1900
MslI	CAYNNNNRTG	2 cut(s)	1257, 1475
MspA1I	CMGCKG	2 cut(s)	1145, 1313
MspI	CCGG	8 cut(s)	155, 199, 209, 226, 354, 396, 429, 1428
MspR9I	CCNGG	4 cut(s)	155, 310, 635, 695
MunI	CAATTG	1 cut(s)	1290
MvaI	CCWGG	3 cut(s)	310, 635, 695
MvnI	CGCG	5 cut(s)	238, 277, 598, 766, 882
NarI	GGCGCC	1 cut(s)	351
NciI	CCSGG	1 cut(s)	155
NcoI	CCATGG	4 cut(s)	945, 1002, 1241, 1640
NdeI	CATATG	1 cut(s)	1774
NdeII	GATC	2 cut(s)	22, 1008
NheI	GCTAGC	1 cut(s)	1033
NmuCI	GTSAC	3 cut(s)	1039, 1432, 1546
NspI	RCATGY	1 cut(s)	1769
PaeI	GCATGC	1 cut(s)	1769
PaeR7I	CTCGAG	3 cut(s)	377, 972, 1808
PceI	AGGCCT	1 cut(s)	1880
PcsI	WCGNNNNNNNCGW	2 cut(s)	429, 483
PfeI	GAWTC	6 cut(s)	59, 357, 481, 641, 657, 964
Pfl23II	CGTACG	1 cut(s)	1408
PfoI	TCCNGGA	1 cut(s)	153
PinAI	ACCGGT	2 cut(s)	225, 1427
PkrI	GCNGC	9 cut(s)	98, 101, 104, 497, 550, 589, 884, 1144, 1306
PleI	GAGTC	6 cut(s)	169, 199, 369, 1617, 1784, 1844
PluTI	GGCGCC	1 cut(s)	354
PpsI	GAGTC	6 cut(s)	169, 199, 369, 1617, 1784, 1844
PpuMI	RGGWCCY	2 cut(s)	10, 316
Psp124BI	GAGCTC	1 cut(s)	1153
Psp1406I	AACGTT	1 cut(s)	1341
Psp5II	RGGWCCY	2 cut(s)	10, 316
Psp6I	CCWGG	3 cut(s)	308, 633, 693
PspFI	CCCAGC	1 cut(s)	174
PspGI	CCWGG	3 cut(s)	308, 633, 693
PspLI	CGTACG	1 cut(s)	1408
PspPPI	RGGWCCY	2 cut(s)	10, 316
PspXI	VCTCGAGB	2 cut(s)	377, 1808
PstNI	CAGNNNCTG	1 cut(s)	1892
PvuII	CAGCTG	2 cut(s)	1145, 1313
RsaI	GTAC	4 cut(s)	692, 1059, 1273, 1410
RsaNI	GTAC	4 cut(s)	691, 1058, 1272, 1409
RseI	CAYNNNNRTG	2 cut(s)	1257, 1475
SacI	GAGCTC	1 cut(s)	1153
SalI	GTCGAC	1 cut(s)	202
SaqAI	TTAA	1 cut(s)	1900
SatI	GCNGC	9 cut(s)	97, 100, 103, 496, 549, 588, 883, 1143, 1305
Sau3AI	GATC	2 cut(s)	22, 1008
SchI	GAGTC	6 cut(s)	170, 199, 369, 1618, 1784, 1844
ScrFI	CCNGG	4 cut(s)	155, 310, 635, 695
SduI	GDGCHC	5 cut(s)	336, 752, 761, 880, 1153
SexAI	ACCWGGT	1 cut(s)	308
SfaNI	GCATC	4 cut(s)	1224, 1249, 1432, 1674
SfoI	GGCGCC	1 cut(s)	352
Sfr274I	CTCGAG	3 cut(s)	377, 972, 1808
SinI	GGWCC	8 cut(s)	10, 223, 240, 316, 398, 606, 697, 999
SlaI	CTCGAG	3 cut(s)	377, 972, 1808
SmiMI	CAYNNNNRTG	2 cut(s)	1257, 1475
SmlI	CTYRAG	4 cut(s)	377, 745, 972, 1808
SmoI	CTYRAG	4 cut(s)	377, 745, 972, 1808
SpeI	ACTAGT	1 cut(s)	1166
SphI	GCATGC	1 cut(s)	1769
Sse9I	AATT	3 cut(s)	181, 1071, 1290
SseBI	AGGCCT	1 cut(s)	1880
SspDI	GGCGCC	1 cut(s)	350
SspMI	CTAG	5 cut(s)	54, 213, 1034, 1167, 1896
SstI	GAGCTC	1 cut(s)	1153
StuI	AGGCCT	1 cut(s)	1880
StyD4I	CCNGG	4 cut(s)	153, 308, 633, 693
StyI	CCWWGG	5 cut(s)	945, 1002, 1241, 1640, 1845
TaaI	ACNGT	5 cut(s)	664, 671, 1111, 1467, 1729
TaiI	ACGT	5 cut(s)	423, 780, 798, 924, 1344
TaqI	TCGA	9 cut(s)	168, 203, 378, 477, 567, 973, 1658, 1688, 1809
TasI	AATT	3 cut(s)	181, 1071, 1290
TauI	GCSGC	6 cut(s)	99, 102, 105, 498, 590, 885
TfiI	GAWTC	6 cut(s)	59, 357, 481, 641, 657, 964
Tru1I	TTAA	1 cut(s)	1900
Tru9I	TTAA	1 cut(s)	1900
TscAI	CASTG	3 cut(s)	22, 667, 1194
TseFI	GTSAC	3 cut(s)	1039, 1432, 1546
TseI	GCWGC	3 cut(s)	548, 1142, 1304
Tsp45I	GTSAC	3 cut(s)	1039, 1432, 1546
TspDTI	ATGAA	4 cut(s)	308, 802, 1366, 1761
TspGWI	ACGGA	2 cut(s)	101, 1454
TspRI	CASTG	3 cut(s)	22, 667, 1194
VpaK11BI	GGWCC	8 cut(s)	10, 223, 240, 316, 398, 606, 697, 999
XceI	RCATGY	1 cut(s)	1769
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1638
XhoI	CTCGAG	3 cut(s)	377, 972, 1808
XmiI	GTMKAC	1 cut(s)	203
XspI	CTAG	5 cut(s)	54, 213, 1034, 1167, 1896

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.