Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5A

Orthogroup ID

OG0002369

Physical Location & Seq

Genomic Coordinates Forward (+)

11433015 .. 11441926

Gene Structure 8912 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5AG122400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1902 bp

ATGATCCTTTACTCTTACGCAAAATTCTTGGAAACTGGTCAGGCTGTGGCTATAAAGAAGGTTTTACAATGCAGATTCAAAGAAGTGAGCTCTCTATCCAGACTAAACACTAATGGTAATGAGTTTCCACATTCAAATGCAAGCATTCAAGAGATGGGGATGAGCGGAACGGAACCGAGCGGCGGAGGCGAGGGACTGAAGAGGCGGGGGTGTTCGTGCGGAAAGAATGATTTTCTCCCGGAGGAGTCGTTCGAGAGCTGGGGCAATTACGCCAATGCGCTCCGGTCGACTCCGGCGAGGTTCAAGGACAGGTTCTTCACGCGGTCCACCTACAGCACCGAGCTGGTGGAGGTGAAGGCGCGGAGCCAGCACGAGATGAAGAAGACGCTTGACTGGTGGGACCTCATCTGGTTCGGGCTCGGAGCTGTCATCGGCGCTGGAATCTTCGTCCTCACTGGATTCGAGGCCAAGAAACACGCCGGACCCGCCGTCGTCGTGTCCTACGTCGTCTCCGGCGTCTCCGCCTTGCTCTCTGTTTTCTGTTACACAGAGTTCGCCGTCGAGATTCCCGTTGCAGGCGGCTCATTTGCCTACCTAAGAGTGGAGCTTGGGGACTTCGTGGCCTACATTGCAGCAGGCAACATCCTTCTCGAATATGTCATAGGCGGGGCGGCCGTTGCGCGTTCGTGGACCTCCTACTTCACCTCCCTATGCAACCAGGACGATTCCAATGCTTTCAGAATCACTGTCCACGGTTGGTCGGAGGACTACAAGTACCTGGACCCCATTGCCATTGGGGTAATCATCTTTATCTGCATACTCGTCGTCTTGAGCACAAAGGGCTCCTCGCACCTCAACAGCGTCGCCTCCATAGTCCACGTCATCGTCATTCTCTTCATCATCATAGCAGGTCTCCTTGCAGGTCTCACCAAAGCAGATACTGACAACTACAAGGAGTTTGCCCCAAATGGTGCTCGCGGCATCTTCCAAGCCTCGGCAGTTCTCTTCTTTGCATACGTTGGATTTGACGCCGTTTCAACCATGGCCGAAGAGACCAAGAATCCTGCTCGAGACATCCCAATAGGGCTGGTTGGGTCCATGGTGATCACCACCACTCTTTATTGCTTGCTAGCCGTGACACTCTGTCTTATGGTACCGTATCAGGTAATTGATGAGAACGCTCCATTTTCAAAAGCGTTTGAGACAGTTGGTATGGATTGGGCCAAGTATGTGGTTGCAGCTGGAGCTTTAAAAGGCATGACTAGTGTTTTGCTCGTCGGGGCAGTGGGTCAGGCCCGGTATTTGACCCACATTGCCCGAACCCACATGATGCCCCCATGGTTTGCTCAAGTTGATGCCAAGACAGGTACTCCAGTCCATGCCACAATTGTCATGCTCGCAGCCACAGCTGTAATCGCTTTCTTCACCAGCCTCAACATTCTTGCTAACCTTCTCTCCATTTCTACGCTATTCATCTTCAGCCTCGTTGCCATTGCTCTACTCGTACGCCGTTACTATGTAACCGGCGTGACCACGGATGCAAACAGGAATAAGCTCATACTGTGCATTGTAATGATACTCGGGGGTGCAATTGCCACTTCTGCTTACAGGGCTGTCAGCCATGATTGGGTAGGGTATTGCGTGACGGCTCCTATTTGGTTCTTGGGGACTTTGGGGATTTGGTTTCTTGTTCCGCAAGCAAGGAGTCCAAAGGTTTGGGGGGTGCCATTGGTTCCATGGTTTCCTTCACTTTCAATTGGCATCAACATTTTCTTGCTTGGTTCGATTGATGGTGCTTCTTTTGTCAGGTTTGCAGTATGGACTGTGATTACCTTGGTTTACTACATTTTCTTTGGGTTGCATGCTTCATATGACACAGCAAAGGACTCTGAAACTAATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005623 GO:0005886 GO:0016020 GO:0044464 GO:0071944

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AA_permease_2 AA_permease_C

Protein Analysis

633

Amino Acids

68.86

Weight (kDa)

7.56

Isoelectric Point (pI)

29.15

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AA_permease_2	PF13520	130 - 504	4.6e-54	Amino acid permease
AA_permease	PF00324	135 - 505	7.7e-35	Amino acid permease
AA_permease_C	PF13906	573 - 623	7e-17	C-terminus of AA_permease

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002369)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G21120 AT4G21120
fragaria_vesca	FvH4_3g09930 FvH4_3g09940
malus_domestica	MD05G1274600.v1.1 MD05G1274700.v1.1 MD05G1274900.v1.1 MD10G1254300.v1.1
prunus_persica	Prupe.4G089000_v2.0.a1 Prupe.4G089100_v2.0.a1
pyrus_communis	pycom05g25610 pycom05g25630 pycom10g21000
rosa_chinensis	RchiOBHm_Chr5g0015621 RchiOBHm_Chr5g0015661 RchiOBHm_Chr5g0015691 RchiOBHm_Chr5g0015791
rosa_laevigata	RLG00000032214 RLG00000032217 RLG00000032219
rosa_multiflora	Rmu_sc0000843.1_g000004 Rmu_sc0000843.1_g000008 Rmu_sc0003230.1_g000003 Rmu_sc0003230.1_g000005
rosa_roxburghii	Rroxscaffold_1G00060830
rosa_rugosa	Rorug01G0078300 Rorug05G0029000 Rorug05G0029100
rosa_samantha	Rh5AG122300 Rh5AG122400 Rh5AG122600 Rh5BG120900 Rh5BG121200 Rh5BG121700 Rh5CG131300 Rh5CG131900 Rh5CG132800 Rh5DG119900 Rh5DG120600
rosa_wichuraiana	Rw5G010550 Rw5G010560 Rw5G010570

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	899, 911
Acc65I	GGTACC	1 cut(s)	1153
AccB1I	GGYRCC	2 cut(s)	1153, 1723
AccBSI	CCGCTC	2 cut(s)	165, 180
AccI	GTMKAC	1 cut(s)	287
AccII	CGCG	4 cut(s)	322, 361, 682, 978
AcoI	YGGCCR	2 cut(s)	672, 1044
AcsI	RAATTY	1 cut(s)	23
AcuI	CTGAAG	2 cut(s)	218, 1462
AcyI	GRCGYC	2 cut(s)	516, 1029
AfaI	GTAC	4 cut(s)	776, 1155, 1369, 1506
AfiI	CCNNNNNNNGG	5 cut(s)	182, 575, 601, 994, 1627
AgsI	TTSAA	7 cut(s)	79, 135, 149, 304, 1038, 1191, 1755
AhdI	GACNNNNNGTC	2 cut(s)	488, 1143
AhlI	ACTAGT	1 cut(s)	1262
AjiI	CACGTC	1 cut(s)	880
AjnI	CCWGG	2 cut(s)	717, 777
AloI	GAACNNNNNNTCC	2 cut(s)	233, 265
AluBI	AGCT	9 cut(s)	90, 258, 343, 425, 607, 1241, 1247, 1409, 1555
AluI	AGCT	9 cut(s)	90, 258, 343, 425, 607, 1241, 1247, 1409, 1555
Alw21I	GWGCWC	3 cut(s)	92, 836, 976
Alw26I	GTCTC	7 cut(s)	514, 523, 917, 929, 1046, 1065, 1196
AlwNI	CAGNNNCTG	1 cut(s)	941
Ama87I	CYCGRG	2 cut(s)	1068, 1580
AoxI	GGCC	6 cut(s)	465, 621, 672, 1044, 1221, 1293
ApeKI	GCWGC	3 cut(s)	632, 1238, 1400
ApoI	RAATTY	1 cut(s)	23
ArsI	GACNNNNNNTTYG	2 cut(s)	1252, 1284
Asp718I	GGTACC	1 cut(s)	1153
AspLEI	GCGC	4 cut(s)	280, 361, 437, 682
AspS9I	GGNCC	8 cut(s)	324, 400, 482, 690, 781, 1095, 1221, 1294
AsuC2I	CCSGG	2 cut(s)	239, 1297
AsuHPI	GGTGA	6 cut(s)	364, 694, 919, 1099, 1114, 1417
AsuNHI	GCTAGC	1 cut(s)	1129
AvaI	CYCGRG	2 cut(s)	1068, 1580
AvaII	GGWCC	6 cut(s)	324, 400, 482, 690, 781, 1095
BaeI	ACNNNNGTAYC	2 cut(s)	1359, 1392
BanI	GGYRCC	2 cut(s)	1153, 1723
BanII	GRGCYC	3 cut(s)	92, 420, 845
BauI	CACGAG	1 cut(s)	371
BbsI	GAAGAC	1 cut(s)	389
Bbv12I	GWGCWC	3 cut(s)	92, 836, 976
BbvI	GCAGC	3 cut(s)	644, 1250, 1412
BccI	CCATC	2 cut(s)	148, 1784
BceAI	ACGGC	7 cut(s)	473, 542, 659, 1016, 1118, 1494, 1662
BcgI	CGANNNNNNTGC	4 cut(s)	713, 747, 805, 839
BciT130I	CCWGG	2 cut(s)	719, 779
BclI	TGATCA	1 cut(s)	1104
BcnI	CCSGG	2 cut(s)	239, 1297
BcoDI	GTCTC	7 cut(s)	514, 523, 917, 929, 1046, 1065, 1196
BcuI	ACTAGT	1 cut(s)	1262
BfaI	CTAG	2 cut(s)	1130, 1263
BfmI	CTRYAG	1 cut(s)	331
BfoI	RGCGCY	1 cut(s)	438
BfuAI	ACCTGC	2 cut(s)	899, 911
BisI	GCNGC	7 cut(s)	181, 580, 633, 672, 979, 1239, 1401
BlsI	GCNGC	7 cut(s)	182, 581, 634, 673, 980, 1240, 1402
Bme1390I	CCNGG	4 cut(s)	239, 719, 779, 1297
Bme18I	GGWCC	6 cut(s)	324, 400, 482, 690, 781, 1095
BmeRI	GACNNNNNGTC	2 cut(s)	488, 1143
BmeT110I	CYCGRG	2 cut(s)	1068, 1580
BmgBI	CACGTC	1 cut(s)	880
BmgT120I	GGNCC	8 cut(s)	324, 400, 482, 690, 781, 1095, 1221, 1294
BmrFI	CCNGG	4 cut(s)	239, 719, 779, 1297
BmsI	GCATC	5 cut(s)	990, 1320, 1345, 1528, 1770
BmtI	GCTAGC	1 cut(s)	1133
BpiI	GAAGAC	1 cut(s)	389
BpmI	CTGGAG	2 cut(s)	1263, 1356
BpuEI	CTTGAG	2 cut(s)	850, 1332
BpuMI	CCSGG	2 cut(s)	239, 1297
BsaHI	GRCGYC	2 cut(s)	516, 1029
BsaI	GGTCTC	3 cut(s)	917, 929, 1046
BsaJI	CCNNGG	8 cut(s)	751, 993, 1041, 1098, 1337, 1533, 1736, 1833
BsaWI	WCCGGW	1 cut(s)	282
Bsc4I	CCNNNNNNNGG	5 cut(s)	182, 575, 601, 994, 1627
Bse118I	RCCGGY	1 cut(s)	1523
Bse1I	ACTGG	4 cut(s)	40, 398, 460, 1373
Bse3DI	GCAATG	4 cut(s)	627, 786, 1311, 1491
BseBI	CCWGG	2 cut(s)	719, 779
BseDI	CCNNGG	8 cut(s)	751, 993, 1041, 1098, 1337, 1533, 1736, 1833
BseGI	GGATG	4 cut(s)	165, 642, 1074, 1543
BseLI	CCNNNNNNNGG	5 cut(s)	182, 575, 601, 994, 1627
BseMI	GCAATG	4 cut(s)	627, 786, 1311, 1491
BseNI	ACTGG	4 cut(s)	40, 398, 460, 1373
BseRI	GAGGAG	2 cut(s)	257, 835
BseX3I	CGGCCG	1 cut(s)	672
BseXI	GCAGC	3 cut(s)	644, 1250, 1412
BseYI	CCCAGC	1 cut(s)	258
Bsh1236I	CGCG	4 cut(s)	322, 361, 682, 978
Bsh1285I	CGRYCG	2 cut(s)	287, 675
BshFI	GGCC	6 cut(s)	467, 623, 674, 1046, 1223, 1295
BshNI	GGYRCC	2 cut(s)	1153, 1723
BsiEI	CGRYCG	2 cut(s)	287, 675
BsiHKAI	GWGCWC	3 cut(s)	92, 836, 976
BsiHKCI	CYCGRG	2 cut(s)	1068, 1580
BsiSI	CCGG	7 cut(s)	239, 283, 293, 480, 513, 1297, 1524
BsiWI	CGTACG	1 cut(s)	1504
BslFI	GGGAC	4 cut(s)	207, 413, 626, 1681
BslI	CCNNNNNNNGG	5 cut(s)	182, 575, 601, 994, 1627
BsmAI	GTCTC	7 cut(s)	514, 523, 917, 929, 1046, 1065, 1196
BsmBI	CGTCTC	2 cut(s)	514, 523
BsmFI	GGGAC	4 cut(s)	207, 413, 626, 1681
BsmI	GAATGC	1 cut(s)	144
BsnI	GGCC	6 cut(s)	467, 623, 674, 1046, 1223, 1295
Bso31I	GGTCTC	3 cut(s)	917, 929, 1046
BsoBI	CYCGRG	2 cut(s)	1068, 1580
Bsp1286I	GDGCHC	5 cut(s)	92, 420, 836, 845, 976
Bsp143I	GATC	2 cut(s)	3, 1104
Bsp19I	CCATGG	4 cut(s)	1041, 1098, 1337, 1736
BspANI	GGCC	6 cut(s)	467, 623, 674, 1046, 1223, 1295
BspFNI	CGCG	4 cut(s)	322, 361, 682, 978
BspMI	ACCTGC	2 cut(s)	899, 911
BspOI	GCTAGC	1 cut(s)	1133
BspT107I	GGYRCC	2 cut(s)	1153, 1723
BspTNI	GGTCTC	3 cut(s)	917, 929, 1046
BsrBI	CCGCTC	2 cut(s)	165, 180
BsrDI	GCAATG	4 cut(s)	627, 786, 1311, 1491
BsrFI	RCCGGY	1 cut(s)	1523
BsrI	ACTGG	4 cut(s)	40, 398, 460, 1373
BssAI	RCCGGY	1 cut(s)	1523
BssECI	CCNNGG	8 cut(s)	751, 993, 1041, 1098, 1337, 1533, 1736, 1833
BssMI	GATC	2 cut(s)	3, 1104
BssNI	GRCGYC	2 cut(s)	516, 1029
BssSI	CACGAG	1 cut(s)	371
BssT1I	CCWWGG	5 cut(s)	1041, 1098, 1337, 1736, 1833
Bst2BI	CACGAG	1 cut(s)	371
Bst2UI	CCWGG	2 cut(s)	719, 779
Bst4CI	ACNGT	6 cut(s)	748, 755, 1158, 1207, 1563, 1825
Bst6I	CTCTTC	4 cut(s)	194, 899, 1010, 1044
BstACI	GRCGYC	2 cut(s)	516, 1029
BstDEI	CTNAG	1 cut(s)	596
BstDSI	CCRYGG	6 cut(s)	751, 1041, 1098, 1337, 1533, 1736
BstF5I	GGATG	4 cut(s)	165, 642, 1074, 1543
BstFNI	CGCG	4 cut(s)	322, 361, 682, 978
BstH2I	RGCGCY	1 cut(s)	438
BstHHI	GCGC	4 cut(s)	280, 361, 437, 682
BstKTI	GATC	2 cut(s)	6, 1107
BstMAI	GTCTC	7 cut(s)	514, 523, 917, 929, 1046, 1065, 1196
BstMBI	GATC	2 cut(s)	3, 1104
BstMCI	CGRYCG	2 cut(s)	287, 675
BstNI	CCWGG	2 cut(s)	719, 779
BstNSI	RCATGY	1 cut(s)	1865
BstSCI	CCNGG	4 cut(s)	237, 717, 777, 1295
BstSFI	CTRYAG	1 cut(s)	331
BstUI	CGCG	4 cut(s)	322, 361, 682, 978
BstV1I	GCAGC	3 cut(s)	644, 1250, 1412
BstV2I	GAAGAC	1 cut(s)	389
BstXI	CCANNNNNNTGG	2 cut(s)	1231, 1716
BstZI	CGGCCG	1 cut(s)	672
BsuRI	GGCC	6 cut(s)	467, 623, 674, 1046, 1223, 1295
BtgI	CCRYGG	6 cut(s)	751, 1041, 1098, 1337, 1533, 1736
BtrI	CACGTC	1 cut(s)	880
BtsCI	GGATG	4 cut(s)	165, 642, 1074, 1543
BtsI	GCAGTG	1 cut(s)	1290
BtsIMutI	CAGTG	3 cut(s)	453, 744, 1290
BveI	ACCTGC	2 cut(s)	899, 911
CaiI	CAGNNNCTG	1 cut(s)	941
CfoI	GCGC	4 cut(s)	280, 361, 437, 682
Cfr10I	RCCGGY	1 cut(s)	1523
Cfr13I	GGNCC	8 cut(s)	324, 400, 482, 690, 781, 1095, 1221, 1294
CseI	GACGC	4 cut(s)	394, 505, 850, 1037
Csp6I	GTAC	4 cut(s)	775, 1154, 1368, 1505
CviQI	GTAC	4 cut(s)	775, 1154, 1368, 1505
DdeI	CTNAG	1 cut(s)	596
DpnI	GATC	2 cut(s)	5, 1106
DpnII	GATC	2 cut(s)	3, 1104
DraI	TTTAAA	1 cut(s)	1251
DriI	GACNNNNNGTC	2 cut(s)	488, 1143
EaeI	YGGCCR	2 cut(s)	672, 1044
EagI	CGGCCG	1 cut(s)	672
Eam1104I	CTCTTC	4 cut(s)	194, 899, 1010, 1044
Eam1105I	GACNNNNNGTC	2 cut(s)	488, 1143
EarI	CTCTTC	4 cut(s)	194, 899, 1010, 1044
EciI	GGCGGA	2 cut(s)	198, 511
Ecl136II	GAGCTC	1 cut(s)	90
EclXI	CGGCCG	1 cut(s)	672
Eco130I	CCWWGG	5 cut(s)	1041, 1098, 1337, 1736, 1833
Eco24I	GRGCYC	3 cut(s)	92, 420, 845
Eco31I	GGTCTC	3 cut(s)	917, 929, 1046
Eco47I	GGWCC	6 cut(s)	324, 400, 482, 690, 781, 1095
Eco52I	CGGCCG	1 cut(s)	672
Eco53kI	GAGCTC	1 cut(s)	90
Eco57I	CTGAAG	2 cut(s)	218, 1462
Eco88I	CYCGRG	2 cut(s)	1068, 1580
EcoICRI	GAGCTC	1 cut(s)	90
EcoO109I	RGGNCCY	1 cut(s)	400
EcoRII	CCWGG	2 cut(s)	717, 777
EcoT14I	CCWWGG	5 cut(s)	1041, 1098, 1337, 1736, 1833
EcoT38I	GRGCYC	3 cut(s)	92, 420, 845
ErhI	CCWWGG	5 cut(s)	1041, 1098, 1337, 1736, 1833
Esp3I	CGTCTC	2 cut(s)	514, 523
FaqI	GGGAC	4 cut(s)	207, 413, 626, 1681
FauI	CCCGC	3 cut(s)	198, 493, 659
FauNDI	CATATG	1 cut(s)	1870
FbaI	TGATCA	1 cut(s)	1104
FblI	GTMKAC	1 cut(s)	287
Fnu4HI	GCNGC	7 cut(s)	181, 580, 633, 672, 979, 1239, 1401
FokI	GGATG	4 cut(s)	172, 629, 1061, 1550
FriOI	GRGCYC	3 cut(s)	92, 420, 845
Fsp4HI	GCNGC	7 cut(s)	181, 580, 633, 672, 979, 1239, 1401
FspBI	CTAG	2 cut(s)	1130, 1263
GlaI	GCGC	4 cut(s)	279, 360, 436, 681
GluI	GCNGC	7 cut(s)	181, 580, 633, 672, 979, 1239, 1401
GsaI	CCCAGC	1 cut(s)	262
GsuI	CTGGAG	2 cut(s)	1263, 1356
HaeII	RGCGCY	1 cut(s)	438
HaeIII	GGCC	6 cut(s)	467, 623, 674, 1046, 1223, 1295
HapII	CCGG	7 cut(s)	239, 283, 293, 480, 513, 1297, 1524
HgaI	GACGC	4 cut(s)	394, 505, 850, 1037
HhaI	GCGC	4 cut(s)	280, 361, 437, 682
Hin1I	GRCGYC	2 cut(s)	516, 1029
Hin6I	GCGC	4 cut(s)	278, 359, 435, 680
HinP1I	GCGC	4 cut(s)	278, 359, 435, 680
HincII	GTYRAC	1 cut(s)	288
HindII	GTYRAC	1 cut(s)	288
HpaII	CCGG	7 cut(s)	239, 283, 293, 480, 513, 1297, 1524
HphI	GGTGA	6 cut(s)	364, 694, 919, 1099, 1114, 1417
Hpy166II	GTNNAC	6 cut(s)	288, 327, 690, 751, 877, 1840
Hpy188I	TCNGA	4 cut(s)	422, 740, 763, 1891
Hpy188III	TCNNGA	7 cut(s)	99, 149, 253, 562, 650, 829, 1070
Hpy8I	GTNNAC	6 cut(s)	288, 327, 690, 751, 877, 1840
Hpy99I	CGWCG	7 cut(s)	494, 497, 509, 563, 827, 866, 1280
HpyAV	CCTTC	5 cut(s)	52, 349, 656, 1460, 1755
HpyCH4III	ACNGT	6 cut(s)	748, 755, 1158, 1207, 1563, 1825
HpyCH4IV	ACGT	3 cut(s)	504, 879, 1017
HpyF3I	CTNAG	1 cut(s)	596
HpySE526I	ACGT	3 cut(s)	504, 879, 1017
Hsp92I	GRCGYC	2 cut(s)	516, 1029
HspAI	GCGC	4 cut(s)	278, 359, 435, 680
KpnI	GGTACC	1 cut(s)	1157
Ksp22I	TGATCA	1 cut(s)	1104
Kzo9I	GATC	2 cut(s)	3, 1104
LmnI	GCTCC	8 cut(s)	285, 363, 422, 604, 848, 1186, 1244, 1654
Lsp1109I	GCAGC	3 cut(s)	644, 1250, 1412
LweI	GCATC	5 cut(s)	990, 1320, 1345, 1528, 1770
MaeI	CTAG	2 cut(s)	1130, 1263
MaeII	ACGT	3 cut(s)	504, 879, 1017
MaeIII	GTNAC	6 cut(s)	542, 1135, 1511, 1519, 1528, 1642
MalI	GATC	2 cut(s)	5, 1106
MbiI	CCGCTC	2 cut(s)	165, 180
MboI	GATC	2 cut(s)	3, 1104
MfeI	CAATTG	3 cut(s)	1386, 1590, 1755
MhlI	GDGCHC	5 cut(s)	92, 420, 836, 845, 976
MluCI	AATT	7 cut(s)	23, 265, 1167, 1386, 1590, 1755, 1897
MlyI	GAGTC	4 cut(s)	254, 283, 1714, 1880
MmeI	TCCRAC	2 cut(s)	741, 1000
MseI	TTAA	2 cut(s)	1250, 1900
MslI	CAYNNNNRTG	2 cut(s)	135, 1571
MspA1I	CMGCKG	2 cut(s)	1241, 1409
MspI	CCGG	7 cut(s)	239, 283, 293, 480, 513, 1297, 1524
MspR9I	CCNGG	4 cut(s)	239, 719, 779, 1297
MunI	CAATTG	3 cut(s)	1386, 1590, 1755
Mva1269I	GAATGC	1 cut(s)	144
MvaI	CCWGG	2 cut(s)	719, 779
MvnI	CGCG	4 cut(s)	322, 361, 682, 978
NciI	CCSGG	2 cut(s)	239, 1297
NcoI	CCATGG	4 cut(s)	1041, 1098, 1337, 1736
NdeI	CATATG	1 cut(s)	1870
NdeII	GATC	2 cut(s)	3, 1104
NheI	GCTAGC	1 cut(s)	1129
NmeAIII	GCCGAG	1 cut(s)	974
NmuCI	GTSAC	3 cut(s)	1135, 1528, 1642
NspI	RCATGY	1 cut(s)	1865
PaeI	GCATGC	1 cut(s)	1865
PaeR7I	CTCGAG	1 cut(s)	1068
PcsI	WCGNNNNNNNCGW	4 cut(s)	293, 501, 513, 567
PctI	GAATGC	1 cut(s)	144
PfeI	GAWTC	7 cut(s)	75, 441, 459, 565, 725, 741, 1060
Pfl23II	CGTACG	1 cut(s)	1504
PfoI	TCCNGGA	1 cut(s)	237
PkrI	GCNGC	7 cut(s)	182, 581, 634, 673, 980, 1240, 1402
PleI	GAGTC	4 cut(s)	253, 283, 1713, 1880
PpsI	GAGTC	4 cut(s)	253, 283, 1713, 1880
PpuMI	RGGWCCY	1 cut(s)	400
Psp124BI	GAGCTC	1 cut(s)	92
Psp5II	RGGWCCY	1 cut(s)	400
Psp6I	CCWGG	2 cut(s)	717, 777
PspFI	CCCAGC	1 cut(s)	258
PspGI	CCWGG	2 cut(s)	717, 777
PspLI	CGTACG	1 cut(s)	1504
PspPI	GGNCC	8 cut(s)	324, 400, 482, 690, 781, 1095, 1221, 1294
PspPPI	RGGWCCY	1 cut(s)	400
PstNI	CAGNNNCTG	1 cut(s)	941
PvuII	CAGCTG	2 cut(s)	1241, 1409
RsaI	GTAC	4 cut(s)	776, 1155, 1369, 1506
RsaNI	GTAC	4 cut(s)	775, 1154, 1368, 1505
RseI	CAYNNNNRTG	2 cut(s)	135, 1571
SacI	GAGCTC	1 cut(s)	92
SalI	GTCGAC	1 cut(s)	286
SaqAI	TTAA	2 cut(s)	1250, 1900
SatI	GCNGC	7 cut(s)	181, 580, 633, 672, 979, 1239, 1401
Sau3AI	GATC	2 cut(s)	3, 1104
Sau96I	GGNCC	8 cut(s)	324, 400, 482, 690, 781, 1095, 1221, 1294
SchI	GAGTC	4 cut(s)	254, 283, 1714, 1880
ScrFI	CCNGG	4 cut(s)	239, 719, 779, 1297
SduI	GDGCHC	5 cut(s)	92, 420, 836, 845, 976
SfaNI	GCATC	5 cut(s)	990, 1320, 1345, 1528, 1770
SfcI	CTRYAG	1 cut(s)	331
Sfr274I	CTCGAG	1 cut(s)	1068
SinI	GGWCC	6 cut(s)	324, 400, 482, 690, 781, 1095
SlaI	CTCGAG	1 cut(s)	1068
SmiMI	CAYNNNNRTG	2 cut(s)	135, 1571
SmlI	CTYRAG	3 cut(s)	829, 1068, 1347
SmoI	CTYRAG	3 cut(s)	829, 1068, 1347
SpeI	ACTAGT	1 cut(s)	1262
SphI	GCATGC	1 cut(s)	1865
Sse9I	AATT	7 cut(s)	23, 265, 1167, 1386, 1590, 1755, 1897
SspMI	CTAG	2 cut(s)	1130, 1263
SstI	GAGCTC	1 cut(s)	92
StyD4I	CCNGG	4 cut(s)	237, 717, 777, 1295
StyI	CCWWGG	5 cut(s)	1041, 1098, 1337, 1736, 1833
TaaI	ACNGT	6 cut(s)	748, 755, 1158, 1207, 1563, 1825
TaiI	ACGT	3 cut(s)	507, 882, 1020
TaqI	TCGA	7 cut(s)	252, 287, 462, 561, 651, 1069, 1784
TasI	AATT	7 cut(s)	23, 265, 1167, 1386, 1590, 1755, 1897
TauI	GCSGC	4 cut(s)	183, 582, 674, 981
TfiI	GAWTC	7 cut(s)	75, 441, 459, 565, 725, 741, 1060
Tru1I	TTAA	2 cut(s)	1250, 1900
Tru9I	TTAA	2 cut(s)	1250, 1900
TscAI	CASTG	3 cut(s)	460, 751, 1290
TseFI	GTSAC	3 cut(s)	1135, 1528, 1642
TseI	GCWGC	3 cut(s)	632, 1238, 1400
Tsp45I	GTSAC	3 cut(s)	1135, 1528, 1642
TspDTI	ATGAA	4 cut(s)	392, 886, 1462, 1857
TspGWI	ACGGA	2 cut(s)	185, 1550
TspRI	CASTG	3 cut(s)	460, 751, 1290
VpaK11BI	GGWCC	6 cut(s)	324, 400, 482, 690, 781, 1095
XapI	RAATTY	1 cut(s)	23
XceI	RCATGY	1 cut(s)	1865
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1734
XhoI	CTCGAG	1 cut(s)	1068
XmiI	GTMKAC	1 cut(s)	287
XspI	CTAG	2 cut(s)	1130, 1263

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.