Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0002369

Physical Location & Seq

Genomic Coordinates Forward (+)

10857357 .. 10860872

Gene Structure 3516 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ29608

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1749 bp

ATGGGGATGAGCGGAACGGAACCGAGCGGCGGAGGAGAGGGACTGAAGAGGTGGGGGTGTTCGTGCGGAAAGAACGATTTTCTCCCGGAGGAGTCGTTCGAGAGCTGGGGCAATTACGCCAATGCGCTCCGGTCCACTCCGGCGAGGTTCAAGGACAGGTTCTTCACTCGGTCCGCCTACAGCACCGAGCTGGTGGAGGTGAAGGCGCGGAGCCAGCACGAGATGAAGAAGACGCTTGACTGGTGGGACCTCATCTGGTTCGGGCTCGGAGCTGTCATCGGCGCTGGAATCTTCGTCCTCACTGGATTCGAGGCCAAGAAACACGCCGGACCCGCCGTCGTCGTGTCCTACGTCGTCTCCGGCGTCTCCGCCTTGCTCTCTGTTTTCTGTTACACAGAGTTCGCCGTCGAGATTCCCGTTGCAGGCGGCTCATTTGCCTACCTAAGAGTGGAGCTTGGGGACTTCGTGGCCTACATTGCAGCAGGCAACATCCTTCTCGAATATGTCATAGGCGGGGCGGCCGTTGCGCGTTCGTGGACCTCCTACTTCACCTCCCTATGCAACCAGGACGATTCCAATGCTTTCCGAATCACTGTCCACGGTTGGTCGGAGGACTACAAGTACCTGGACCCCATTGCCATTGGGGTTATCATCTTTATCTGCATACTCGCCGTCTTGAGCACAAAGGGCTCCTCGCACCTCAACTGCGTCGCCTCCATAGTCCACGTCATCGTCATTCTCTTCATCATCATAGCCGGTCTCCTAGCAGGTCTCACCAAAGCAGATACTGACAACTACAAGGAGTTTGCCCCAAATGGTGCTCGCGGCATCTTCCAAGCCTCGGCAGTTCTCTTCTTTGCATACGTTGGATTTGACGCCGTTTCAACCATGGCTGAAGAGACCAAGAATCCTGCTCGAGACATCCCAATAGGGCTGGTTGGGTCCATGGTGATCACCACCACTCTTTATTGCTTGCTAGCCGTGACACTCTGTCTTATGGTACCGTATCAGGTAATTGATGAGAACGCTCCATTTTCAAAAGCGTTTGAGACAGTTGGTATGGATTGGGCCAAGTATGTGGTTGCAGCTGGAGCTTTAAAAGGCATGACTAGTGTTTTGCTCGTCGGGGCAGTGGGTCAGGCCCGGTATTTGACCCACATTGCCCGAACCCACATGATGCCCCCATGGTTTGCTCAAGTTGATGCCAAGACAGGTACTCCAGTCCATGCCACAATTGTCATGCTCGCAGCCACAGCTGTAATCGCTTTCTTCACCAGCCTCGACATTCTTGCTAACCTTCTCTCCATTTCTACGCTATTCATCTTCAGCCTCGTTGCCATTGCTCTGCTCGTACGCCGTTACTATGTAACCGGCGTGACCACGGATGCAAACAGGAATAAGCTCATACTGTGCATTGTAATGATACTCGGGGGTGCAATTGCCACTTCTTCTTACTGGGGTGTCAGCCATGATTGGGTAGGGTATTGCGTGACGGCTCCTATTTGGTTCTTGGGGACTTTGGGGATTTGGTTTCTTGTTCCGCAAGCAAGGAGTCCAAAGGTTTGGGGGGTGCCATTGGTTCCATGGTTTCCTTCACTTTCAATTGGCATCAACATTTTCTTGCTTGGATCGATTGATGGTGCTTCTTTTGTCAGGTTTGCAGTATGGACTGTGATTACCTTGGTTTACTACATTTTCTTTGGGTTGCATGCTTCATATGACACAGCAAAGGACTCTGAAACTAATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005623 GO:0005886 GO:0016020 GO:0044464 GO:0071944

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AA_permease_2 AA_permease_C

Protein Analysis

582

Amino Acids

63.13

Weight (kDa)

6.22

Isoelectric Point (pI)

29.14

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AA_permease_2	PF13520	79 - 454	1e-52	Amino acid permease
AA_permease	PF00324	84 - 453	4.5e-35	Amino acid permease
AA_permease_C	PF13906	522 - 572	6.2e-17	C-terminus of AA_permease

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002369)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G21120 AT4G21120
fragaria_vesca	FvH4_3g09930 FvH4_3g09940
malus_domestica	MD05G1274600.v1.1 MD05G1274700.v1.1 MD05G1274900.v1.1 MD10G1254300.v1.1
prunus_persica	Prupe.4G089000_v2.0.a1 Prupe.4G089100_v2.0.a1
pyrus_communis	pycom05g25610 pycom05g25630 pycom10g21000
rosa_chinensis	RchiOBHm_Chr5g0015621 RchiOBHm_Chr5g0015661 RchiOBHm_Chr5g0015691 RchiOBHm_Chr5g0015791
rosa_laevigata	RLG00000032214 RLG00000032217 RLG00000032219
rosa_multiflora	Rmu_sc0000843.1_g000004 Rmu_sc0000843.1_g000008 Rmu_sc0003230.1_g000003 Rmu_sc0003230.1_g000005
rosa_roxburghii	Rroxscaffold_1G00060830
rosa_rugosa	Rorug01G0078300 Rorug05G0029000 Rorug05G0029100
rosa_samantha	Rh5AG122300 Rh5AG122400 Rh5AG122600 Rh5BG120900 Rh5BG121200 Rh5BG121700 Rh5CG131300 Rh5CG131900 Rh5CG132800 Rh5DG119900 Rh5DG120600
rosa_wichuraiana	Rw5G010550 Rw5G010560 Rw5G010570

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	758
Acc65I	GGTACC	1 cut(s)	1000
AccB1I	GGYRCC	2 cut(s)	1000, 1570
AccBSI	CCGCTC	2 cut(s)	12, 27
AccII	CGCG	3 cut(s)	208, 529, 825
AclWI	GGATC	1 cut(s)	1636
AcoI	YGGCCR	1 cut(s)	519
AcuI	CTGAAG	3 cut(s)	65, 915, 1309
AcyI	GRCGYC	2 cut(s)	363, 876
AfaI	GTAC	4 cut(s)	623, 1002, 1216, 1353
AfiI	CCNNNNNNNGG	5 cut(s)	29, 422, 448, 841, 1474
AgsI	TTSAA	4 cut(s)	151, 885, 1038, 1602
AhdI	GACNNNNNGTC	2 cut(s)	335, 990
AhlI	ACTAGT	1 cut(s)	1109
AjiI	CACGTC	1 cut(s)	727
AjnI	CCWGG	2 cut(s)	564, 624
AloI	GAACNNNNNNTCC	2 cut(s)	80, 112
AluBI	AGCT	8 cut(s)	105, 190, 272, 454, 1088, 1094, 1256, 1402
AluI	AGCT	8 cut(s)	105, 190, 272, 454, 1088, 1094, 1256, 1402
Alw21I	GWGCWC	2 cut(s)	683, 823
Alw26I	GTCTC	7 cut(s)	361, 370, 764, 776, 893, 912, 1043
AlwI	GGATC	1 cut(s)	1636
AlwNI	CAGNNNCTG	1 cut(s)	788
Ama87I	CYCGRG	2 cut(s)	915, 1427
AoxI	GGCC	5 cut(s)	312, 468, 519, 1068, 1140
ApeKI	GCWGC	3 cut(s)	479, 1085, 1247
ArsI	GACNNNNNNTTYG	2 cut(s)	1099, 1131
Asp718I	GGTACC	1 cut(s)	1000
AspLEI	GCGC	4 cut(s)	127, 208, 284, 529
AspS9I	GGNCC	9 cut(s)	132, 171, 247, 329, 537, 628, 942, 1068, 1141
AsuC2I	CCSGG	2 cut(s)	86, 1144
AsuHPI	GGTGA	6 cut(s)	211, 541, 766, 946, 961, 1264
AsuNHI	GCTAGC	1 cut(s)	976
AvaI	CYCGRG	2 cut(s)	915, 1427
AvaII	GGWCC	7 cut(s)	132, 171, 247, 329, 537, 628, 942
BaeI	ACNNNNGTAYC	2 cut(s)	1206, 1239
BanI	GGYRCC	2 cut(s)	1000, 1570
BanII	GRGCYC	2 cut(s)	267, 692
BauI	CACGAG	1 cut(s)	218
BbsI	GAAGAC	1 cut(s)	236
Bbv12I	GWGCWC	2 cut(s)	683, 823
BbvI	GCAGC	3 cut(s)	491, 1097, 1259
BccI	CCATC	1 cut(s)	1631
BceAI	ACGGC	8 cut(s)	320, 389, 506, 656, 863, 965, 1341, 1509
BcgI	CGANNNNNNTGC	4 cut(s)	560, 594, 1271, 1305
BciT130I	CCWGG	2 cut(s)	566, 626
BclI	TGATCA	1 cut(s)	951
BcnI	CCSGG	2 cut(s)	86, 1144
BcoDI	GTCTC	7 cut(s)	361, 370, 764, 776, 893, 912, 1043
BcuI	ACTAGT	1 cut(s)	1109
BfaI	CTAG	3 cut(s)	764, 977, 1110
BfmI	CTRYAG	1 cut(s)	178
BfoI	RGCGCY	1 cut(s)	285
BfuAI	ACCTGC	1 cut(s)	758
BisI	GCNGC	7 cut(s)	28, 427, 480, 519, 826, 1086, 1248
BlsI	GCNGC	7 cut(s)	29, 428, 481, 520, 827, 1087, 1249
Bme1390I	CCNGG	4 cut(s)	86, 566, 626, 1144
Bme18I	GGWCC	7 cut(s)	132, 171, 247, 329, 537, 628, 942
BmeRI	GACNNNNNGTC	2 cut(s)	335, 990
BmeT110I	CYCGRG	2 cut(s)	915, 1427
BmgBI	CACGTC	1 cut(s)	727
BmgT120I	GGNCC	9 cut(s)	132, 171, 247, 329, 537, 628, 942, 1068, 1141
BmrFI	CCNGG	4 cut(s)	86, 566, 626, 1144
BmrI	ACTGGG	1 cut(s)	1465
BmsI	GCATC	5 cut(s)	837, 1167, 1192, 1375, 1617
BmtI	GCTAGC	1 cut(s)	980
BmuI	ACTGGG	1 cut(s)	1465
BpiI	GAAGAC	1 cut(s)	236
BpmI	CTGGAG	2 cut(s)	1110, 1203
BpuEI	CTTGAG	2 cut(s)	697, 1179
BpuMI	CCSGG	2 cut(s)	86, 1144
Bsa29I	ATCGAT	1 cut(s)	1631
BsaHI	GRCGYC	2 cut(s)	363, 876
BsaI	GGTCTC	3 cut(s)	764, 776, 893
BsaJI	CCNNGG	8 cut(s)	598, 840, 888, 945, 1184, 1380, 1583, 1680
BsaWI	WCCGGW	1 cut(s)	129
Bsc4I	CCNNNNNNNGG	5 cut(s)	29, 422, 448, 841, 1474
Bse118I	RCCGGY	2 cut(s)	755, 1370
Bse1I	ACTGG	4 cut(s)	245, 307, 1220, 1460
Bse3DI	GCAATG	4 cut(s)	474, 633, 1158, 1338
BseBI	CCWGG	2 cut(s)	566, 626
BseCI	ATCGAT	1 cut(s)	1631
BseDI	CCNNGG	8 cut(s)	598, 840, 888, 945, 1184, 1380, 1583, 1680
BseGI	GGATG	4 cut(s)	12, 489, 921, 1390
BseLI	CCNNNNNNNGG	5 cut(s)	29, 422, 448, 841, 1474
BseMI	GCAATG	4 cut(s)	474, 633, 1158, 1338
BseNI	ACTGG	4 cut(s)	245, 307, 1220, 1460
BseRI	GAGGAG	3 cut(s)	48, 104, 682
BseX3I	CGGCCG	1 cut(s)	519
BseXI	GCAGC	3 cut(s)	491, 1097, 1259
BseYI	CCCAGC	1 cut(s)	105
Bsh1236I	CGCG	3 cut(s)	208, 529, 825
Bsh1285I	CGRYCG	1 cut(s)	522
BshFI	GGCC	5 cut(s)	314, 470, 521, 1070, 1142
BshNI	GGYRCC	2 cut(s)	1000, 1570
BshVI	ATCGAT	1 cut(s)	1631
BsiEI	CGRYCG	1 cut(s)	522
BsiHKAI	GWGCWC	2 cut(s)	683, 823
BsiHKCI	CYCGRG	2 cut(s)	915, 1427
BsiSI	CCGG	8 cut(s)	86, 130, 140, 327, 360, 756, 1144, 1371
BsiWI	CGTACG	1 cut(s)	1351
BslFI	GGGAC	4 cut(s)	54, 260, 473, 1528
BslI	CCNNNNNNNGG	5 cut(s)	29, 422, 448, 841, 1474
BsmAI	GTCTC	7 cut(s)	361, 370, 764, 776, 893, 912, 1043
BsmBI	CGTCTC	2 cut(s)	361, 370
BsmFI	GGGAC	4 cut(s)	54, 260, 473, 1528
BsnI	GGCC	5 cut(s)	314, 470, 521, 1070, 1142
Bso31I	GGTCTC	3 cut(s)	764, 776, 893
BsoBI	CYCGRG	2 cut(s)	915, 1427
Bsp1286I	GDGCHC	4 cut(s)	267, 683, 692, 823
Bsp143I	GATC	2 cut(s)	951, 1628
Bsp19I	CCATGG	4 cut(s)	888, 945, 1184, 1583
BspANI	GGCC	5 cut(s)	314, 470, 521, 1070, 1142
BspDI	ATCGAT	1 cut(s)	1631
BspFNI	CGCG	3 cut(s)	208, 529, 825
BspMI	ACCTGC	1 cut(s)	758
BspOI	GCTAGC	1 cut(s)	980
BspPI	GGATC	1 cut(s)	1636
BspT107I	GGYRCC	2 cut(s)	1000, 1570
BspTNI	GGTCTC	3 cut(s)	764, 776, 893
BsrBI	CCGCTC	2 cut(s)	12, 27
BsrDI	GCAATG	4 cut(s)	474, 633, 1158, 1338
BsrFI	RCCGGY	2 cut(s)	755, 1370
BsrI	ACTGG	4 cut(s)	245, 307, 1220, 1460
BssAI	RCCGGY	2 cut(s)	755, 1370
BssECI	CCNNGG	8 cut(s)	598, 840, 888, 945, 1184, 1380, 1583, 1680
BssMI	GATC	2 cut(s)	951, 1628
BssNI	GRCGYC	2 cut(s)	363, 876
BssSI	CACGAG	1 cut(s)	218
BssT1I	CCWWGG	5 cut(s)	888, 945, 1184, 1583, 1680
Bst2BI	CACGAG	1 cut(s)	218
Bst2UI	CCWGG	2 cut(s)	566, 626
Bst4CI	ACNGT	6 cut(s)	595, 602, 1005, 1054, 1410, 1672
Bst6I	CTCTTC	4 cut(s)	41, 746, 857, 891
BstACI	GRCGYC	2 cut(s)	363, 876
BstC8I	GCNNGC	9 cut(s)	215, 424, 484, 823, 974, 978, 1245, 1545, 1710
BstDEI	CTNAG	1 cut(s)	443
BstDSI	CCRYGG	6 cut(s)	598, 888, 945, 1184, 1380, 1583
BstF5I	GGATG	4 cut(s)	12, 489, 921, 1390
BstFNI	CGCG	3 cut(s)	208, 529, 825
BstH2I	RGCGCY	1 cut(s)	285
BstHHI	GCGC	4 cut(s)	127, 208, 284, 529
BstKTI	GATC	2 cut(s)	954, 1631
BstMAI	GTCTC	7 cut(s)	361, 370, 764, 776, 893, 912, 1043
BstMBI	GATC	2 cut(s)	951, 1628
BstMCI	CGRYCG	1 cut(s)	522
BstMWI	GCNNNNNNNGC	8 cut(s)	214, 332, 476, 524, 687, 1091, 1253, 1262
BstNI	CCWGG	2 cut(s)	566, 626
BstNSI	RCATGY	1 cut(s)	1712
BstSCI	CCNGG	4 cut(s)	84, 564, 624, 1142
BstSFI	CTRYAG	1 cut(s)	178
BstUI	CGCG	3 cut(s)	208, 529, 825
BstV1I	GCAGC	3 cut(s)	491, 1097, 1259
BstV2I	GAAGAC	1 cut(s)	236
BstXI	CCANNNNNNTGG	2 cut(s)	1078, 1563
BstZI	CGGCCG	1 cut(s)	519
Bsu15I	ATCGAT	1 cut(s)	1631
BsuRI	GGCC	5 cut(s)	314, 470, 521, 1070, 1142
BsuTUI	ATCGAT	1 cut(s)	1631
BtgI	CCRYGG	6 cut(s)	598, 888, 945, 1184, 1380, 1583
BtrI	CACGTC	1 cut(s)	727
BtsCI	GGATG	4 cut(s)	12, 489, 921, 1390
BtsI	GCAGTG	1 cut(s)	1137
BtsIMutI	CAGTG	3 cut(s)	300, 591, 1137
BveI	ACCTGC	1 cut(s)	758
Cac8I	GCNNGC	9 cut(s)	215, 424, 484, 823, 974, 978, 1245, 1545, 1710
CaiI	CAGNNNCTG	1 cut(s)	788
CfoI	GCGC	4 cut(s)	127, 208, 284, 529
Cfr10I	RCCGGY	2 cut(s)	755, 1370
Cfr13I	GGNCC	9 cut(s)	132, 171, 247, 329, 537, 628, 942, 1068, 1141
ClaI	ATCGAT	1 cut(s)	1631
CpoI	CGGWCCG	1 cut(s)	171
CseI	GACGC	4 cut(s)	241, 352, 697, 884
Csp6I	GTAC	4 cut(s)	622, 1001, 1215, 1352
CspI	CGGWCCG	1 cut(s)	171
CviQI	GTAC	4 cut(s)	622, 1001, 1215, 1352
DdeI	CTNAG	1 cut(s)	443
DpnI	GATC	2 cut(s)	953, 1630
DpnII	GATC	2 cut(s)	951, 1628
DraI	TTTAAA	1 cut(s)	1098
DriI	GACNNNNNGTC	2 cut(s)	335, 990
EaeI	YGGCCR	1 cut(s)	519
EagI	CGGCCG	1 cut(s)	519
Eam1104I	CTCTTC	4 cut(s)	41, 746, 857, 891
Eam1105I	GACNNNNNGTC	2 cut(s)	335, 990
EarI	CTCTTC	4 cut(s)	41, 746, 857, 891
EciI	GGCGGA	3 cut(s)	45, 163, 358
EclXI	CGGCCG	1 cut(s)	519
Eco130I	CCWWGG	5 cut(s)	888, 945, 1184, 1583, 1680
Eco24I	GRGCYC	2 cut(s)	267, 692
Eco31I	GGTCTC	3 cut(s)	764, 776, 893
Eco47I	GGWCC	7 cut(s)	132, 171, 247, 329, 537, 628, 942
Eco52I	CGGCCG	1 cut(s)	519
Eco57I	CTGAAG	3 cut(s)	65, 915, 1309
Eco88I	CYCGRG	2 cut(s)	915, 1427
EcoO109I	RGGNCCY	1 cut(s)	247
EcoRII	CCWGG	2 cut(s)	564, 624
EcoT14I	CCWWGG	5 cut(s)	888, 945, 1184, 1583, 1680
EcoT38I	GRGCYC	2 cut(s)	267, 692
ErhI	CCWWGG	5 cut(s)	888, 945, 1184, 1583, 1680
Esp3I	CGTCTC	2 cut(s)	361, 370
FaqI	GGGAC	4 cut(s)	54, 260, 473, 1528
FauI	CCCGC	2 cut(s)	340, 506
FauNDI	CATATG	1 cut(s)	1717
FbaI	TGATCA	1 cut(s)	951
Fnu4HI	GCNGC	7 cut(s)	28, 427, 480, 519, 826, 1086, 1248
FokI	GGATG	4 cut(s)	19, 476, 908, 1397
FriOI	GRGCYC	2 cut(s)	267, 692
Fsp4HI	GCNGC	7 cut(s)	28, 427, 480, 519, 826, 1086, 1248
FspBI	CTAG	3 cut(s)	764, 977, 1110
GlaI	GCGC	4 cut(s)	126, 207, 283, 528
GluI	GCNGC	7 cut(s)	28, 427, 480, 519, 826, 1086, 1248
GsaI	CCCAGC	1 cut(s)	109
GsuI	CTGGAG	2 cut(s)	1110, 1203
HaeII	RGCGCY	1 cut(s)	285
HaeIII	GGCC	5 cut(s)	314, 470, 521, 1070, 1142
HapII	CCGG	8 cut(s)	86, 130, 140, 327, 360, 756, 1144, 1371
HgaI	GACGC	4 cut(s)	241, 352, 697, 884
HhaI	GCGC	4 cut(s)	127, 208, 284, 529
Hin1I	GRCGYC	2 cut(s)	363, 876
Hin6I	GCGC	4 cut(s)	125, 206, 282, 527
HinP1I	GCGC	4 cut(s)	125, 206, 282, 527
HinfI	GANTC	9 cut(s)	92, 288, 306, 412, 572, 588, 907, 1552, 1733
HpaII	CCGG	8 cut(s)	86, 130, 140, 327, 360, 756, 1144, 1371
HphI	GGTGA	6 cut(s)	211, 541, 766, 946, 961, 1264
Hpy166II	GTNNAC	5 cut(s)	135, 537, 598, 724, 1687
Hpy188I	TCNGA	4 cut(s)	269, 587, 610, 1738
Hpy188III	TCNNGA	5 cut(s)	100, 409, 497, 676, 917
Hpy8I	GTNNAC	5 cut(s)	135, 537, 598, 724, 1687
Hpy99I	CGWCG	6 cut(s)	341, 344, 356, 410, 713, 1127
HpyAV	CCTTC	4 cut(s)	196, 503, 1307, 1602
HpyCH4III	ACNGT	6 cut(s)	595, 602, 1005, 1054, 1410, 1672
HpyCH4IV	ACGT	3 cut(s)	351, 726, 864
HpyF10VI	GCNNNNNNNGC	8 cut(s)	214, 332, 476, 524, 687, 1091, 1253, 1262
HpyF3I	CTNAG	1 cut(s)	443
HpySE526I	ACGT	3 cut(s)	351, 726, 864
Hsp92I	GRCGYC	2 cut(s)	363, 876
HspAI	GCGC	4 cut(s)	125, 206, 282, 527
KpnI	GGTACC	1 cut(s)	1004
Ksp22I	TGATCA	1 cut(s)	951
Kzo9I	GATC	2 cut(s)	951, 1628
LmnI	GCTCC	8 cut(s)	132, 210, 269, 451, 695, 1033, 1091, 1501
Lsp1109I	GCAGC	3 cut(s)	491, 1097, 1259
LweI	GCATC	5 cut(s)	837, 1167, 1192, 1375, 1617
MaeI	CTAG	3 cut(s)	764, 977, 1110
MaeII	ACGT	3 cut(s)	351, 726, 864
MaeIII	GTNAC	6 cut(s)	389, 982, 1358, 1366, 1375, 1489
MalI	GATC	2 cut(s)	953, 1630
MbiI	CCGCTC	2 cut(s)	12, 27
MboI	GATC	2 cut(s)	951, 1628
MfeI	CAATTG	3 cut(s)	1233, 1437, 1602
MhlI	GDGCHC	4 cut(s)	267, 683, 692, 823
MluCI	AATT	6 cut(s)	112, 1014, 1233, 1437, 1602, 1744
MlyI	GAGTC	3 cut(s)	101, 1561, 1727
MmeI	TCCRAC	2 cut(s)	588, 847
MseI	TTAA	2 cut(s)	1097, 1747
MslI	CAYNNNNRTG	1 cut(s)	1418
MspA1I	CMGCKG	2 cut(s)	1088, 1256
MspI	CCGG	8 cut(s)	86, 130, 140, 327, 360, 756, 1144, 1371
MspR9I	CCNGG	4 cut(s)	86, 566, 626, 1144
MunI	CAATTG	3 cut(s)	1233, 1437, 1602
MvaI	CCWGG	2 cut(s)	566, 626
MvnI	CGCG	3 cut(s)	208, 529, 825
MwoI	GCNNNNNNNGC	8 cut(s)	214, 332, 476, 524, 687, 1091, 1253, 1262
NciI	CCSGG	2 cut(s)	86, 1144
NcoI	CCATGG	4 cut(s)	888, 945, 1184, 1583
NdeI	CATATG	1 cut(s)	1717
NdeII	GATC	2 cut(s)	951, 1628
NheI	GCTAGC	1 cut(s)	976
NmeAIII	GCCGAG	1 cut(s)	821
NmuCI	GTSAC	3 cut(s)	982, 1375, 1489
NspI	RCATGY	1 cut(s)	1712
PaeI	GCATGC	1 cut(s)	1712
PaeR7I	CTCGAG	1 cut(s)	915
PcsI	WCGNNNNNNNCGW	3 cut(s)	348, 360, 414
PfeI	GAWTC	6 cut(s)	288, 306, 412, 572, 588, 907
Pfl23II	CGTACG	1 cut(s)	1351
PfoI	TCCNGGA	1 cut(s)	84
PkrI	GCNGC	7 cut(s)	29, 428, 481, 520, 827, 1087, 1249
PleI	GAGTC	3 cut(s)	100, 1560, 1727
PpsI	GAGTC	3 cut(s)	100, 1560, 1727
PpuMI	RGGWCCY	1 cut(s)	247
Psp5II	RGGWCCY	1 cut(s)	247
Psp6I	CCWGG	2 cut(s)	564, 624
PspFI	CCCAGC	1 cut(s)	105
PspGI	CCWGG	2 cut(s)	564, 624
PspLI	CGTACG	1 cut(s)	1351
PspPI	GGNCC	9 cut(s)	132, 171, 247, 329, 537, 628, 942, 1068, 1141
PspPPI	RGGWCCY	1 cut(s)	247
PstNI	CAGNNNCTG	1 cut(s)	788
PvuII	CAGCTG	2 cut(s)	1088, 1256
RsaI	GTAC	4 cut(s)	623, 1002, 1216, 1353
RsaNI	GTAC	4 cut(s)	622, 1001, 1215, 1352
RseI	CAYNNNNRTG	1 cut(s)	1418
Rsr2I	CGGWCCG	1 cut(s)	171
RsrII	CGGWCCG	1 cut(s)	171
SaqAI	TTAA	2 cut(s)	1097, 1747
SatI	GCNGC	7 cut(s)	28, 427, 480, 519, 826, 1086, 1248
Sau3AI	GATC	2 cut(s)	951, 1628
Sau96I	GGNCC	9 cut(s)	132, 171, 247, 329, 537, 628, 942, 1068, 1141
SchI	GAGTC	3 cut(s)	101, 1561, 1727
ScrFI	CCNGG	4 cut(s)	86, 566, 626, 1144
SduI	GDGCHC	4 cut(s)	267, 683, 692, 823
SfaNI	GCATC	5 cut(s)	837, 1167, 1192, 1375, 1617
SfcI	CTRYAG	1 cut(s)	178
Sfr274I	CTCGAG	1 cut(s)	915
SinI	GGWCC	7 cut(s)	132, 171, 247, 329, 537, 628, 942
SlaI	CTCGAG	1 cut(s)	915
SmiMI	CAYNNNNRTG	1 cut(s)	1418
SmlI	CTYRAG	3 cut(s)	676, 915, 1194
SmoI	CTYRAG	3 cut(s)	676, 915, 1194
SpeI	ACTAGT	1 cut(s)	1109
SphI	GCATGC	1 cut(s)	1712
Sse9I	AATT	6 cut(s)	112, 1014, 1233, 1437, 1602, 1744
SspMI	CTAG	3 cut(s)	764, 977, 1110
StyD4I	CCNGG	4 cut(s)	84, 564, 624, 1142
StyI	CCWWGG	5 cut(s)	888, 945, 1184, 1583, 1680
TaaI	ACNGT	6 cut(s)	595, 602, 1005, 1054, 1410, 1672
TaiI	ACGT	3 cut(s)	354, 729, 867
TaqI	TCGA	7 cut(s)	99, 309, 408, 498, 916, 1281, 1631
TaqII	GACCGA	1 cut(s)	159
TasI	AATT	6 cut(s)	112, 1014, 1233, 1437, 1602, 1744
TauI	GCSGC	4 cut(s)	30, 429, 521, 828
TfiI	GAWTC	6 cut(s)	288, 306, 412, 572, 588, 907
Tru1I	TTAA	2 cut(s)	1097, 1747
Tru9I	TTAA	2 cut(s)	1097, 1747
TscAI	CASTG	3 cut(s)	307, 598, 1137
TseFI	GTSAC	3 cut(s)	982, 1375, 1489
TseI	GCWGC	3 cut(s)	479, 1085, 1247
Tsp45I	GTSAC	3 cut(s)	982, 1375, 1489
TspDTI	ATGAA	4 cut(s)	239, 733, 1309, 1704
TspGWI	ACGGA	2 cut(s)	32, 1397
TspRI	CASTG	3 cut(s)	307, 598, 1137
VpaK11BI	GGWCC	7 cut(s)	132, 171, 247, 329, 537, 628, 942
XceI	RCATGY	1 cut(s)	1712
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1581
XhoI	CTCGAG	1 cut(s)	915
XspI	CTAG	3 cut(s)	764, 977, 1110

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.