Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0003230.1

Orthogroup ID

OG0002369

Physical Location & Seq

Genomic Coordinates Forward (+)

31662 .. 35015

Gene Structure 3354 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0003230.1_g000005.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1833 bp

atggggatgagcggaacggaaccgagcggcggaggcgagggactgaagaggcgggggtgttcgtgcggaaagaatgattttctcccggaggagtcgttcgagagctggggcaattacgccaatgcgctccggtcgactccggcgaggttcaaggaccggttcttcacgcggtcagccgacagcaccgagctggtggaggtgaaggcgcggagccagcacgagatgaagaagacgctcaactggtgggacctcatctggttcgggctcggagccgtcatcggcgccggaatcttcgtcctcactggactcgaggccaagaaacacgccggacccgccgtcgtcatgtcctacgtcgtctccggcgtctccgccttgctctctgttttctgttacacagagttcgccgtcgagattcccgttgcaggcggctcgtttgcctacctaagagtggagcttggggacttcgtggcctacattgcagcaggcaacatccttctcgaatatgtcataggcggggcggcagttgcgcgttcgtggacctcctacttcacctccctatgcaaccaggacgattccaatgctttccgaatcactgtccacggttggtcggaggactacaagtacctggaccccatagccattggggttatcatctgtatctgcatactcgccgtcttgagcacaaagggctcctcgcgcctcaactacgtcgcctccatagtccacgtcatcgtcattctcttcatcatcatagcaggtctcaccaaagcagatactaacaactacaaggattttgccccaaatggtgctcgcggcgtgttccaagcctcggcagttctcttcttcgcatacgttggatttgacgccgttgcaaccatggccgaagagaccaagaatcctgctcgtgacatcccaatagggctggttgggtccatggtgatcaccaccactctttattgcttgctagccgtgacactctgcctcatggtaccgtatcaggtaattgatgaggacgctccattttcaaaagcgtttgagacagttggtatgggttgggccaagtatgtggttgcagctggagctctaaaaggcatgactagtgttttgctcgtcggggcagtgggtcaggcccggtatttgacccacattgcccgaacccacatgatgcccccatggtttgctcaagttgatgccaagacaggtactccagtcaatgccacaattgtcatgctcgcagccacagctgtaatcgctttcttcaccagcctcgacattcttgctaaccttctctccatttctacgctattcatcttcagcctcgttgccattgctctcctcgtacgccgttactatgtaaccggtgtgaccacggatgcaaacaggaataagctcatactgtgcattgtaatgatactcgggggtgcaattgccacttctgcttactggggtgtcagccatgattggttagggtattgcgtgacggctcctatttggttcttggggactttggggatttggtttcttgttccgcaagcaaggagtccaaagctttggggggtgccattggttccatggttgccttcactttcgattggcatcaacattttcttgcttggttcgattgatggtgcttcttttgtcaggtttgcagtatggactgtgattatcttggtttactacattttctttgggttgcatgcttcatatgacacagcaaaggactctgaagctgcgaggctcgagggtgggaaatacgagacgaaggttgaaggaactaaggactctggtttggacggtgcgtatagcaaggcctctacagaacctgctagttaa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005623 GO:0005886 GO:0016020 GO:0044464 GO:0071944

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AA_permease_2 AA_permease_C

Protein Analysis

610

Amino Acids

65.84

Weight (kDa)

6.47

Isoelectric Point (pI)

31.89

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002369)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G21120 AT4G21120
fragaria_vesca	FvH4_3g09930 FvH4_3g09940
malus_domestica	MD05G1274600.v1.1 MD05G1274700.v1.1 MD05G1274900.v1.1 MD10G1254300.v1.1
prunus_persica	Prupe.4G089000_v2.0.a1 Prupe.4G089100_v2.0.a1
pyrus_communis	pycom05g25610 pycom05g25630 pycom10g21000
rosa_chinensis	RchiOBHm_Chr5g0015621 RchiOBHm_Chr5g0015661 RchiOBHm_Chr5g0015691 RchiOBHm_Chr5g0015791
rosa_laevigata	RLG00000032214 RLG00000032217 RLG00000032219
rosa_multiflora	Rmu_sc0000843.1_g000004 Rmu_sc0000843.1_g000008 Rmu_sc0003230.1_g000003 Rmu_sc0003230.1_g000005
rosa_roxburghii	Rroxscaffold_1G00060830
rosa_rugosa	Rorug01G0078300 Rorug05G0029000 Rorug05G0029100
rosa_samantha	Rh5AG122300 Rh5AG122400 Rh5AG122600 Rh5BG120900 Rh5BG121200 Rh5BG121700 Rh5CG131300 Rh5CG131900 Rh5CG132800 Rh5DG119900 Rh5DG120600
rosa_wichuraiana	Rw5G010550 Rw5G010560 Rw5G010570

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	746
Acc65I	GGTACC	1 cut(s)	988
AccB1I	GGYRCC	3 cut(s)	281, 988, 1558
AccBSI	CCGCTC	2 cut(s)	12, 27
AccI	GTMKAC	1 cut(s)	134
AccII	CGCG	5 cut(s)	169, 208, 529, 697, 813
AcoI	YGGCCR	1 cut(s)	879
AcuI	CTGAAG	3 cut(s)	65, 1297, 1746
AcyI	GRCGYC	3 cut(s)	282, 363, 864
AfaI	GTAC	4 cut(s)	623, 990, 1204, 1341
AfiI	CCNNNNNNNGG	4 cut(s)	29, 422, 448, 829
AgeI	ACCGGT	2 cut(s)	156, 1358
AgsI	TTSAA	3 cut(s)	151, 1026, 1769
AhdI	GACNNNNNGTC	1 cut(s)	335
AhlI	ACTAGT	1 cut(s)	1097
AjiI	CACGTC	1 cut(s)	727
AjnI	CCWGG	2 cut(s)	564, 624
AloI	GAACNNNNNNTCC	2 cut(s)	80, 112
AluBI	AGCT	9 cut(s)	105, 190, 454, 1076, 1082, 1244, 1390, 1549, 1730
AluI	AGCT	9 cut(s)	105, 190, 454, 1076, 1082, 1244, 1390, 1549, 1730
Alw21I	GWGCWC	3 cut(s)	683, 811, 1084
Alw26I	GTCTC	6 cut(s)	361, 370, 764, 881, 1031, 1751
AlwNI	CAGNNNCTG	1 cut(s)	1823
Ama87I	CYCGRG	3 cut(s)	308, 1415, 1739
AoxI	GGCC	6 cut(s)	312, 468, 879, 1056, 1128, 1809
ApeKI	GCWGC	4 cut(s)	479, 1073, 1235, 1730
ArsI	GACNNNNNNTTYG	2 cut(s)	1087, 1119
AsiGI	ACCGGT	2 cut(s)	156, 1358
Asp718I	GGTACC	1 cut(s)	988
AspLEI	GCGC	5 cut(s)	127, 208, 284, 529, 699
AspS9I	GGNCC	8 cut(s)	154, 247, 329, 537, 628, 930, 1056, 1129
AsuC2I	CCSGG	2 cut(s)	86, 1132
AsuHPI	GGTGA	6 cut(s)	211, 541, 754, 934, 949, 1252
AsuNHI	GCTAGC	1 cut(s)	964
AvaI	CYCGRG	3 cut(s)	308, 1415, 1739
AvaII	GGWCC	6 cut(s)	154, 247, 329, 537, 628, 930
BaeI	ACNNNNGTAYC	2 cut(s)	1194, 1227
BanI	GGYRCC	3 cut(s)	281, 988, 1558
BanII	GRGCYC	3 cut(s)	267, 692, 1084
BauI	CACGAG	2 cut(s)	218, 903
BbsI	GAAGAC	1 cut(s)	236
Bbv12I	GWGCWC	3 cut(s)	683, 811, 1084
BbvI	GCAGC	4 cut(s)	491, 1085, 1247, 1717
BccI	CCATC	1 cut(s)	1619
BceAI	ACGGC	8 cut(s)	257, 320, 389, 656, 851, 953, 1329, 1497
BcgI	CGANNNNNNTGC	6 cut(s)	411, 445, 560, 594, 1259, 1293
BciT130I	CCWGG	2 cut(s)	566, 626
BclI	TGATCA	1 cut(s)	939
BcnI	CCSGG	2 cut(s)	86, 1132
BcoDI	GTCTC	6 cut(s)	361, 370, 764, 881, 1031, 1751
BcuI	ACTAGT	1 cut(s)	1097
BfaI	CTAG	3 cut(s)	965, 1098, 1827
BfmI	CTRYAG	1 cut(s)	1815
BfoI	RGCGCY	1 cut(s)	285
BfuAI	ACCTGC	1 cut(s)	746
BisI	GCNGC	8 cut(s)	28, 427, 480, 519, 814, 1074, 1236, 1731
BlsI	GCNGC	8 cut(s)	29, 428, 481, 520, 815, 1075, 1237, 1732
Bme1390I	CCNGG	4 cut(s)	86, 566, 626, 1132
Bme18I	GGWCC	6 cut(s)	154, 247, 329, 537, 628, 930
BmeRI	GACNNNNNGTC	1 cut(s)	335
BmeT110I	CYCGRG	3 cut(s)	308, 1415, 1739
BmgBI	CACGTC	1 cut(s)	727
BmgT120I	GGNCC	8 cut(s)	154, 247, 329, 537, 628, 930, 1056, 1129
BmrFI	CCNGG	4 cut(s)	86, 566, 626, 1132
BmrI	ACTGGG	1 cut(s)	1453
BmsI	GCATC	4 cut(s)	1155, 1180, 1363, 1605
BmtI	GCTAGC	1 cut(s)	968
BmuI	ACTGGG	1 cut(s)	1453
BpiI	GAAGAC	1 cut(s)	236
BpmI	CTGGAG	2 cut(s)	1098, 1191
BpuEI	CTTGAG	2 cut(s)	697, 1167
BpuMI	CCSGG	2 cut(s)	86, 1132
BsaBI	GATNNNNATC	1 cut(s)	1595
BsaHI	GRCGYC	3 cut(s)	282, 363, 864
BsaI	GGTCTC	2 cut(s)	764, 881
BsaJI	CCNNGG	7 cut(s)	598, 828, 876, 933, 1172, 1368, 1571
BsaWI	WCCGGW	3 cut(s)	129, 156, 1358
Bsc4I	CCNNNNNNNGG	4 cut(s)	29, 422, 448, 829
Bse118I	RCCGGY	2 cut(s)	156, 1358
Bse1I	ACTGG	4 cut(s)	245, 307, 1208, 1448
Bse3DI	GCAATG	3 cut(s)	474, 1146, 1326
Bse8I	GATNNNNATC	1 cut(s)	1595
BseBI	CCWGG	2 cut(s)	566, 626
BseDI	CCNNGG	7 cut(s)	598, 828, 876, 933, 1172, 1368, 1571
BseGI	GGATG	4 cut(s)	12, 489, 909, 1378
BseJI	GATNNNNATC	1 cut(s)	1595
BseLI	CCNNNNNNNGG	4 cut(s)	29, 422, 448, 829
BseMI	GCAATG	3 cut(s)	474, 1146, 1326
BseNI	ACTGG	4 cut(s)	245, 307, 1208, 1448
BseRI	GAGGAG	3 cut(s)	104, 682, 1325
BseXI	GCAGC	4 cut(s)	491, 1085, 1247, 1717
BseYI	CCCAGC	1 cut(s)	105
Bsh1236I	CGCG	5 cut(s)	169, 208, 529, 697, 813
Bsh1285I	CGRYCG	1 cut(s)	134
BshFI	GGCC	6 cut(s)	314, 470, 881, 1058, 1130, 1811
BshNI	GGYRCC	3 cut(s)	281, 988, 1558
BshTI	ACCGGT	2 cut(s)	156, 1358
BsiEI	CGRYCG	1 cut(s)	134
BsiHKAI	GWGCWC	3 cut(s)	683, 811, 1084
BsiHKCI	CYCGRG	3 cut(s)	308, 1415, 1739
BsiSI	CCGG	9 cut(s)	86, 130, 140, 157, 285, 327, 360, 1132, 1359
BsiWI	CGTACG	1 cut(s)	1339
BslFI	GGGAC	4 cut(s)	54, 260, 473, 1516
BslI	CCNNNNNNNGG	4 cut(s)	29, 422, 448, 829
BsmAI	GTCTC	6 cut(s)	361, 370, 764, 881, 1031, 1751
BsmBI	CGTCTC	3 cut(s)	361, 370, 1751
BsmFI	GGGAC	4 cut(s)	54, 260, 473, 1516
BsnI	GGCC	6 cut(s)	314, 470, 881, 1058, 1130, 1811
Bso31I	GGTCTC	2 cut(s)	764, 881
BsoBI	CYCGRG	3 cut(s)	308, 1415, 1739
Bsp1286I	GDGCHC	5 cut(s)	267, 683, 692, 811, 1084
Bsp143I	GATC	1 cut(s)	939
Bsp19I	CCATGG	4 cut(s)	876, 933, 1172, 1571
BspANI	GGCC	6 cut(s)	314, 470, 881, 1058, 1130, 1811
BspFNI	CGCG	5 cut(s)	169, 208, 529, 697, 813
BspMI	ACCTGC	1 cut(s)	746
BspOI	GCTAGC	1 cut(s)	968
BspT107I	GGYRCC	3 cut(s)	281, 988, 1558
BspTNI	GGTCTC	2 cut(s)	764, 881
BsrBI	CCGCTC	2 cut(s)	12, 27
BsrDI	GCAATG	3 cut(s)	474, 1146, 1326
BsrFI	RCCGGY	2 cut(s)	156, 1358
BsrI	ACTGG	4 cut(s)	245, 307, 1208, 1448
BssAI	RCCGGY	2 cut(s)	156, 1358
BssECI	CCNNGG	7 cut(s)	598, 828, 876, 933, 1172, 1368, 1571
BssMI	GATC	1 cut(s)	939
BssNI	GRCGYC	3 cut(s)	282, 363, 864
BssSI	CACGAG	2 cut(s)	218, 903
BssT1I	CCWWGG	4 cut(s)	876, 933, 1172, 1571
Bst2BI	CACGAG	2 cut(s)	218, 903
Bst2UI	CCWGG	2 cut(s)	566, 626
Bst4CI	ACNGT	7 cut(s)	595, 602, 993, 1042, 1398, 1660, 1796
Bst6I	CTCTTC	4 cut(s)	41, 746, 845, 879
BstACI	GRCGYC	3 cut(s)	282, 363, 864
BstC8I	GCNNGC	9 cut(s)	215, 424, 484, 811, 962, 966, 1233, 1533, 1698
BstDEI	CTNAG	2 cut(s)	443, 1776
BstDSI	CCRYGG	6 cut(s)	598, 876, 933, 1172, 1368, 1571
BstF5I	GGATG	4 cut(s)	12, 489, 909, 1378
BstFNI	CGCG	5 cut(s)	169, 208, 529, 697, 813
BstH2I	RGCGCY	1 cut(s)	285
BstHHI	GCGC	5 cut(s)	127, 208, 284, 529, 699
BstKTI	GATC	1 cut(s)	942
BstMAI	GTCTC	6 cut(s)	361, 370, 764, 881, 1031, 1751
BstMBI	GATC	1 cut(s)	939
BstMCI	CGRYCG	1 cut(s)	134
BstNI	CCWGG	2 cut(s)	566, 626
BstNSI	RCATGY	1 cut(s)	1700
BstSCI	CCNGG	4 cut(s)	84, 564, 624, 1130
BstSFI	CTRYAG	1 cut(s)	1815
BstUI	CGCG	5 cut(s)	169, 208, 529, 697, 813
BstV1I	GCAGC	4 cut(s)	491, 1085, 1247, 1717
BstV2I	GAAGAC	1 cut(s)	236
BstXI	CCANNNNNNTGG	2 cut(s)	1066, 1551
BsuRI	GGCC	6 cut(s)	314, 470, 881, 1058, 1130, 1811
BtgI	CCRYGG	6 cut(s)	598, 876, 933, 1172, 1368, 1571
BtrI	CACGTC	1 cut(s)	727
BtsCI	GGATG	4 cut(s)	12, 489, 909, 1378
BtsI	GCAGTG	1 cut(s)	1125
BtsIMutI	CAGTG	3 cut(s)	300, 591, 1125
BveI	ACCTGC	1 cut(s)	746
Cac8I	GCNNGC	9 cut(s)	215, 424, 484, 811, 962, 966, 1233, 1533, 1698
CaiI	CAGNNNCTG	1 cut(s)	1823
CfoI	GCGC	5 cut(s)	127, 208, 284, 529, 699
Cfr10I	RCCGGY	2 cut(s)	156, 1358
Cfr13I	GGNCC	8 cut(s)	154, 247, 329, 537, 628, 930, 1056, 1129
CseI	GACGC	4 cut(s)	241, 352, 872, 1022
Csp6I	GTAC	4 cut(s)	622, 989, 1203, 1340
CspAI	ACCGGT	2 cut(s)	156, 1358
CviQI	GTAC	4 cut(s)	622, 989, 1203, 1340
DdeI	CTNAG	2 cut(s)	443, 1776
DinI	GGCGCC	1 cut(s)	283
DpnI	GATC	1 cut(s)	941
DpnII	GATC	1 cut(s)	939
DriI	GACNNNNNGTC	1 cut(s)	335
EaeI	YGGCCR	1 cut(s)	879
Eam1104I	CTCTTC	4 cut(s)	41, 746, 845, 879
Eam1105I	GACNNNNNGTC	1 cut(s)	335
EarI	CTCTTC	4 cut(s)	41, 746, 845, 879
EciI	GGCGGA	2 cut(s)	45, 358
Ecl136II	GAGCTC	1 cut(s)	1082
Eco130I	CCWWGG	4 cut(s)	876, 933, 1172, 1571
Eco147I	AGGCCT	1 cut(s)	1811
Eco24I	GRGCYC	3 cut(s)	267, 692, 1084
Eco31I	GGTCTC	2 cut(s)	764, 881
Eco47I	GGWCC	6 cut(s)	154, 247, 329, 537, 628, 930
Eco53kI	GAGCTC	1 cut(s)	1082
Eco57I	CTGAAG	3 cut(s)	65, 1297, 1746
Eco88I	CYCGRG	3 cut(s)	308, 1415, 1739
EcoICRI	GAGCTC	1 cut(s)	1082
EcoO109I	RGGNCCY	1 cut(s)	247
EcoRII	CCWGG	2 cut(s)	564, 624
EcoT14I	CCWWGG	4 cut(s)	876, 933, 1172, 1571
EcoT38I	GRGCYC	3 cut(s)	267, 692, 1084
EgeI	GGCGCC	1 cut(s)	283
EheI	GGCGCC	1 cut(s)	283
ErhI	CCWWGG	4 cut(s)	876, 933, 1172, 1571
Esp3I	CGTCTC	3 cut(s)	361, 370, 1751
FaqI	GGGAC	4 cut(s)	54, 260, 473, 1516
FauI	CCCGC	3 cut(s)	45, 340, 506
FauNDI	CATATG	1 cut(s)	1705
FbaI	TGATCA	1 cut(s)	939
FblI	GTMKAC	1 cut(s)	134
Fnu4HI	GCNGC	8 cut(s)	28, 427, 480, 519, 814, 1074, 1236, 1731
FokI	GGATG	4 cut(s)	19, 476, 896, 1385
FriOI	GRGCYC	3 cut(s)	267, 692, 1084
Fsp4HI	GCNGC	8 cut(s)	28, 427, 480, 519, 814, 1074, 1236, 1731
FspBI	CTAG	3 cut(s)	965, 1098, 1827
GlaI	GCGC	5 cut(s)	126, 207, 283, 528, 698
GluI	GCNGC	8 cut(s)	28, 427, 480, 519, 814, 1074, 1236, 1731
GsaI	CCCAGC	1 cut(s)	109
GsuI	CTGGAG	2 cut(s)	1098, 1191
HaeII	RGCGCY	1 cut(s)	285
HaeIII	GGCC	6 cut(s)	314, 470, 881, 1058, 1130, 1811
HapII	CCGG	9 cut(s)	86, 130, 140, 157, 285, 327, 360, 1132, 1359
HgaI	GACGC	4 cut(s)	241, 352, 872, 1022
HhaI	GCGC	5 cut(s)	127, 208, 284, 529, 699
Hin1I	GRCGYC	3 cut(s)	282, 363, 864
Hin6I	GCGC	5 cut(s)	125, 206, 282, 527, 697
HinP1I	GCGC	5 cut(s)	125, 206, 282, 527, 697
HincII	GTYRAC	1 cut(s)	135
HindII	GTYRAC	1 cut(s)	135
HindIII	AAGCTT	1 cut(s)	1547
HpaII	CCGG	9 cut(s)	86, 130, 140, 157, 285, 327, 360, 1132, 1359
HphI	GGTGA	6 cut(s)	211, 541, 754, 934, 949, 1252
Hpy166II	GTNNAC	5 cut(s)	135, 537, 598, 724, 1675
Hpy188I	TCNGA	4 cut(s)	269, 587, 610, 1726
Hpy188III	TCNNGA	5 cut(s)	100, 409, 497, 676, 905
Hpy8I	GTNNAC	5 cut(s)	135, 537, 598, 724, 1675
Hpy99I	CGWCG	5 cut(s)	341, 356, 410, 713, 1115
HpyAV	CCTTC	6 cut(s)	196, 503, 1295, 1590, 1756, 1763
HpyCH4III	ACNGT	7 cut(s)	595, 602, 993, 1042, 1398, 1660, 1796
HpyCH4IV	ACGT	4 cut(s)	351, 708, 726, 852
HpyF3I	CTNAG	2 cut(s)	443, 1776
HpySE526I	ACGT	4 cut(s)	351, 708, 726, 852
Hsp92I	GRCGYC	3 cut(s)	282, 363, 864
HspAI	GCGC	5 cut(s)	125, 206, 282, 527, 697
KasI	GGCGCC	1 cut(s)	281
KpnI	GGTACC	1 cut(s)	992
Ksp22I	TGATCA	1 cut(s)	939
Kzo9I	GATC	1 cut(s)	939
LmnI	GCTCC	8 cut(s)	132, 210, 269, 451, 695, 1021, 1079, 1489
Lsp1109I	GCAGC	4 cut(s)	491, 1085, 1247, 1717
LweI	GCATC	4 cut(s)	1155, 1180, 1363, 1605
MaeI	CTAG	3 cut(s)	965, 1098, 1827
MaeII	ACGT	4 cut(s)	351, 708, 726, 852
MaeIII	GTNAC	7 cut(s)	389, 905, 970, 1346, 1354, 1363, 1477
MalI	GATC	1 cut(s)	941
MbiI	CCGCTC	2 cut(s)	12, 27
MboI	GATC	1 cut(s)	939
MfeI	CAATTG	2 cut(s)	1221, 1425
MhlI	GDGCHC	5 cut(s)	267, 683, 692, 811, 1084
MluCI	AATT	4 cut(s)	112, 1002, 1221, 1425
Mly113I	GGCGCC	1 cut(s)	282
MlyI	GAGTC	6 cut(s)	101, 130, 300, 1549, 1715, 1775
MmeI	TCCRAC	2 cut(s)	588, 835
MseI	TTAA	1 cut(s)	1831
MslI	CAYNNNNRTG	1 cut(s)	1406
MspA1I	CMGCKG	2 cut(s)	1076, 1244
MspI	CCGG	9 cut(s)	86, 130, 140, 157, 285, 327, 360, 1132, 1359
MspR9I	CCNGG	4 cut(s)	86, 566, 626, 1132
MunI	CAATTG	2 cut(s)	1221, 1425
MvaI	CCWGG	2 cut(s)	566, 626
MvnI	CGCG	5 cut(s)	169, 208, 529, 697, 813
NarI	GGCGCC	1 cut(s)	282
NciI	CCSGG	2 cut(s)	86, 1132
NcoI	CCATGG	4 cut(s)	876, 933, 1172, 1571
NdeI	CATATG	1 cut(s)	1705
NdeII	GATC	1 cut(s)	939
NheI	GCTAGC	1 cut(s)	964
NmeAIII	GCCGAG	1 cut(s)	809
NmuCI	GTSAC	4 cut(s)	905, 970, 1363, 1477
NspI	RCATGY	1 cut(s)	1700
PaeI	GCATGC	1 cut(s)	1700
PaeR7I	CTCGAG	2 cut(s)	308, 1739
PceI	AGGCCT	1 cut(s)	1811
PcsI	WCGNNNNNNNCGW	3 cut(s)	140, 360, 414
PfeI	GAWTC	5 cut(s)	288, 412, 572, 588, 895
Pfl23II	CGTACG	1 cut(s)	1339
PfoI	TCCNGGA	1 cut(s)	84
PinAI	ACCGGT	2 cut(s)	156, 1358
PkrI	GCNGC	8 cut(s)	29, 428, 481, 520, 815, 1075, 1237, 1732
PleI	GAGTC	6 cut(s)	100, 130, 300, 1548, 1715, 1775
PluTI	GGCGCC	1 cut(s)	285
PpsI	GAGTC	6 cut(s)	100, 130, 300, 1548, 1715, 1775
PpuMI	RGGWCCY	1 cut(s)	247
Psp124BI	GAGCTC	1 cut(s)	1084
Psp5II	RGGWCCY	1 cut(s)	247
Psp6I	CCWGG	2 cut(s)	564, 624
PspFI	CCCAGC	1 cut(s)	105
PspGI	CCWGG	2 cut(s)	564, 624
PspLI	CGTACG	1 cut(s)	1339
PspPI	GGNCC	8 cut(s)	154, 247, 329, 537, 628, 930, 1056, 1129
PspPPI	RGGWCCY	1 cut(s)	247
PspXI	VCTCGAGB	2 cut(s)	308, 1739
PstNI	CAGNNNCTG	1 cut(s)	1823
PvuII	CAGCTG	2 cut(s)	1076, 1244
RsaI	GTAC	4 cut(s)	623, 990, 1204, 1341
RsaNI	GTAC	4 cut(s)	622, 989, 1203, 1340
RseI	CAYNNNNRTG	1 cut(s)	1406
SacI	GAGCTC	1 cut(s)	1084
SalI	GTCGAC	1 cut(s)	133
SaqAI	TTAA	1 cut(s)	1831
SatI	GCNGC	8 cut(s)	28, 427, 480, 519, 814, 1074, 1236, 1731
Sau3AI	GATC	1 cut(s)	939
Sau96I	GGNCC	8 cut(s)	154, 247, 329, 537, 628, 930, 1056, 1129
SchI	GAGTC	6 cut(s)	101, 130, 300, 1549, 1715, 1775
ScrFI	CCNGG	4 cut(s)	86, 566, 626, 1132
SduI	GDGCHC	5 cut(s)	267, 683, 692, 811, 1084
SfaNI	GCATC	4 cut(s)	1155, 1180, 1363, 1605
SfcI	CTRYAG	1 cut(s)	1815
SfoI	GGCGCC	1 cut(s)	283
Sfr274I	CTCGAG	2 cut(s)	308, 1739
SinI	GGWCC	6 cut(s)	154, 247, 329, 537, 628, 930
SlaI	CTCGAG	2 cut(s)	308, 1739
SmiMI	CAYNNNNRTG	1 cut(s)	1406
SmlI	CTYRAG	4 cut(s)	308, 676, 1182, 1739
SmoI	CTYRAG	4 cut(s)	308, 676, 1182, 1739
SpeI	ACTAGT	1 cut(s)	1097
SphI	GCATGC	1 cut(s)	1700
Sse9I	AATT	4 cut(s)	112, 1002, 1221, 1425
SseBI	AGGCCT	1 cut(s)	1811
SspDI	GGCGCC	1 cut(s)	281
SspMI	CTAG	3 cut(s)	965, 1098, 1827
SstI	GAGCTC	1 cut(s)	1084
StuI	AGGCCT	1 cut(s)	1811
StyD4I	CCNGG	4 cut(s)	84, 564, 624, 1130
StyI	CCWWGG	4 cut(s)	876, 933, 1172, 1571
TaaI	ACNGT	7 cut(s)	595, 602, 993, 1042, 1398, 1660, 1796
TaiI	ACGT	4 cut(s)	354, 711, 729, 855
TaqI	TCGA	9 cut(s)	99, 134, 309, 408, 498, 1269, 1589, 1619, 1740
TasI	AATT	4 cut(s)	112, 1002, 1221, 1425
TauI	GCSGC	4 cut(s)	30, 429, 521, 816
TfiI	GAWTC	5 cut(s)	288, 412, 572, 588, 895
Tru1I	TTAA	1 cut(s)	1831
Tru9I	TTAA	1 cut(s)	1831
TscAI	CASTG	3 cut(s)	307, 598, 1125
TseFI	GTSAC	4 cut(s)	905, 970, 1363, 1477
TseI	GCWGC	4 cut(s)	479, 1073, 1235, 1730
Tsp45I	GTSAC	4 cut(s)	905, 970, 1363, 1477
TspDTI	ATGAA	4 cut(s)	239, 733, 1297, 1692
TspGWI	ACGGA	2 cut(s)	32, 1385
TspRI	CASTG	3 cut(s)	307, 598, 1125
VpaK11BI	GGWCC	6 cut(s)	154, 247, 329, 537, 628, 930
XceI	RCATGY	1 cut(s)	1700
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1569
XhoI	CTCGAG	2 cut(s)	308, 1739
XmiI	GTMKAC	1 cut(s)	134
XspI	CTAG	3 cut(s)	965, 1098, 1827

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.