Rorug05G0029100

C-terminus of AA_permease

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
OG0002369
Physical Location & Seq
Reverse (-)
1857884 .. 1862655
4772 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0029100.1

Sequence Viewer

Length: 2004 bp
ATGACAGGGATTGATGCAGAGCTGTGCATGGAGGAGTTTGTGGCGAAAATCGAAGTGGAGGATCAGGAGAAGTTGGAGCTGGAGTATGGTGTTGAAATCGAAGCAGAGGCCGTGGTGGATGCGTGCCGAATCATTAAGCAGTACCCTGATGTTTTTCAGTTTAATTGTAGAGGAACACTGGATGATACCGAGAGGGCTATTTTGCAAATGAAGGTAGTAGAGCTTCTAGAAGAGGCTTGTTTGAGATTGAGGCATAAGTTTGACTACTCGAGAGAAGGAGAGGATGAACTAGAGGTGGGGGAGTACAGGTTGCATCGTGCACTTGTTGAGTTGAATGAAATCGAAAAGGAAAGAGAGCCATCCACCCAAAAATGGAGGGATCGTGTGGCCAAGGAACGCGAAGAACTAAACGATATGTGGAACAAGTTGGAGATAAAGTGGTTGGAATTACAAGCTTCACGGCAGAGATATGACATCAGAGCTCGGGAGGCACTTTTGTTGGAAAGGATGCGGGAAGGACTGGTTTACTATTTAAATGAGGAAAGATCGAAGGAAAATTTCTCTGGGTTGTTGCAATGGCTTGATGAACATGTGACTGAGCTTTTATATACAACTCGCAAAGATTTTAAGCATGAGCTGACCGTTAGCTCGCATGCTATTGCACTGGCAGCAAGCTTGTTGATTGATGCTCCACCATCGCAGTTGCTTTCCGAATCACCAGTACTTCAGAACCATGAATTAATTAGGAGGGTAATTGGACAAGAACATGTTCTACTTGCAGTCAGTGCTGCTTTATCGAGGCAGAGGCCTCCACGACGCCCTATTGGATCCTTCATCTTCATGTGTGGATCCGGTTGTGGGAGGACAGAAATTGCCAAACTTTTGGCCACTCTAGTCTTTGGTAAAAAAGACATGCTAACCGAGTTTGATCTAGAAAAGTACACAGGACCAAATTCTTTATCACGCCTTCTTGGTGTTCTCTGTAGCCACATTGAACCAGGCAAGAAGGGAGAGCTATGTGTTAAGAAGAGGCATCTAGGTGTCATTTTGTTTGACAATGTTGACAAGGCTCCTGCGCCTATTATTGAGCTTTTGACCCAGATTATAGGCTTTGGTTATCTAGTAGATGGTAATGGGAATAGTGTTGACTTCACTAATACGATGATCATCATGACGACAAATATTGGATGTGATCAATTGTGGCCGTGGAATTGCAAATGTGCTGATGAAGTTCAAAAGTTTCCTGTCAAAGAAGGATTATTTGATGATGCATGGGAAAGAAATCATAATTTCTGTTACCTATCGCTTCTGAGGGAGACAAAAAATCATTTTGGACCTCAATTTCTTGAATACGTAGATGATGTGATTGGATTTAGGTCTCTTTCCTCTCAACAATTGAAGGCTGTTGCTAGGCTCCAGCTAAGGGACCTTGCCGTGTACATGACCCAGAAGGGCCTCATCATTTACTCCTCTGAAGCTGCATTGGATATTATTGTGCGGAGATCAGCTTGGCCTGGAGATCGAATTAAAGGTGGAGAGAAAATAAGGATGTGGCTGGAACAGAACTTGGTCCCTGTGCTCTTCGAGATGATTTCAAAGAATGAGATATCTGATTTATCTATCATGTATATTGAAGCGTCAGTGGAGTCGGATCAATTGTCTTTCAGAATGGAAAAGACTGGACGTCTATTAGAAGAACGAGACGTTAATCAGTTAGCCTCTTTAAAGGAATTGAGATTAATGTACCAGAAAGAGAAAGAAAGAGCAAAGCGAATCTACATGCTGAGAAAATTTCAGAACAAATTGATGGCTAGTGCAAATGCTGGATTTGATCATGTGACGAATGTTGTTCAAGATCTGGTCAATATAATTCAGGATCTCATTACAATTCCCGGTAGCATCGTCAGGTCCTTCCTGGATAATCCTAAAAAGGTGGCAATGGCGGCCTTGAATGAGGATGAGGTTAGGCAGAACAAGAGGGCAAAAAAAGGGACCAAGGGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
AA_permease_2 AA_permease_C

Protein Analysis

667

Amino Acids

76.78

Weight (kDa)

5.65

Isoelectric Point (pI)

44.55

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
AAA_2 PF07724 273 - 449 5.4e-23 AAA domain (Cdc48 subfamily)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1687
AccII CGCG 1 cut(s) 399
AciI CCGC 3 cut(s) 511, 1498, 1943
AclWI GGATC 8 cut(s) 69, 387, 822, 835, 843, 856, 1659, 1884
AcoI YGGCCR 3 cut(s) 387, 885, 1202
AcsI RAATTY 3 cut(s) 556, 952, 1790
AcuI CTGAAG 2 cut(s) 710, 1494
AcyI GRCGYC 2 cut(s) 817, 1684
AfaI GTAC 6 cut(s) 143, 305, 723, 941, 1439, 1745
AfiI CCNNNNNNNGG 3 cut(s) 372, 858, 1423
AflIII ACRYGT 2 cut(s) 589, 766
AhdI GACNNNNNGTC 1 cut(s) 1683
AjnI CCWGG 3 cut(s) 997, 1513, 1914
Alw21I GWGCWC 3 cut(s) 322, 484, 1581
Alw26I GTCTC 3 cut(s) 1310, 1383, 1695
Alw44I GTGCAC 1 cut(s) 318
AlwI GGATC 8 cut(s) 69, 387, 822, 835, 843, 856, 1659, 1884
Ama87I CYCGRG 2 cut(s) 268, 483
AoxI GGCC 8 cut(s) 108, 387, 806, 885, 1202, 1453, 1511, 1944
ApaLI GTGCAC 1 cut(s) 318
ApeKI GCWGC 3 cut(s) 668, 788, 1478
ApoI RAATTY 3 cut(s) 556, 952, 1790
AseI ATTAAT 2 cut(s) 740, 1739
Asp700I GAANNNNTTC 1 cut(s) 768
AspLEI GCGC 1 cut(s) 1078
AspS9I GGNCC 7 cut(s) 947, 1334, 1426, 1453, 1570, 1908, 1992
AsuC2I CCSGG 1 cut(s) 1893
AsuHPI GGTGA 1 cut(s) 708
AvaI CYCGRG 2 cut(s) 268, 483
AvaII GGWCC 6 cut(s) 947, 1334, 1426, 1570, 1908, 1992
BaeGI GKGCMC 1 cut(s) 322
BalI TGGCCA 2 cut(s) 389, 887
BamHI GGATCC 2 cut(s) 827, 848
BanII GRGCYC 1 cut(s) 484
BarI GAAGNNNNNNTAC 2 cut(s) 207, 239
Bbv12I GWGCWC 3 cut(s) 322, 484, 1581
BbvI GCAGC 3 cut(s) 680, 775, 1465
BccI CCATC 4 cut(s) 367, 703, 1121, 1801
BceAI ACGGC 4 cut(s) 95, 476, 1189, 1418
BciT130I CCWGG 3 cut(s) 999, 1515, 1916
BclI TGATCA 3 cut(s) 1164, 1192, 1831
BcnI CCSGG 1 cut(s) 1893
BcoDI GTCTC 3 cut(s) 1310, 1383, 1695
BfaI CTAG 8 cut(s) 227, 290, 893, 932, 1037, 1121, 1410, 1812
BfmI CTRYAG 1 cut(s) 982
BglII AGATCT 1 cut(s) 1855
BisI GCNGC 4 cut(s) 669, 789, 1479, 1944
BlsI GCNGC 4 cut(s) 670, 790, 1480, 1945
BmcAI AGTACT 1 cut(s) 723
Bme1390I CCNGG 4 cut(s) 999, 1515, 1893, 1916
Bme18I GGWCC 6 cut(s) 947, 1334, 1426, 1570, 1908, 1992
BmeRI GACNNNNNGTC 1 cut(s) 1683
BmeT110I CYCGRG 2 cut(s) 268, 483
BmgT120I GGNCC 7 cut(s) 947, 1334, 1426, 1453, 1570, 1908, 1992
BmiI GGNNCC 7 cut(s) 829, 850, 1071, 1415, 1427, 1572, 1993
BmrFI CCNGG 4 cut(s) 999, 1515, 1893, 1916
BmsI GCATC 8 cut(s) 4, 109, 322, 498, 676, 1042, 1258, 1908
BpmI CTGGAG 3 cut(s) 101, 1400, 1536
Bpu10I CCTNAGC 1 cut(s) 1421
BpuMI CCSGG 1 cut(s) 1893
BsaAI YACGTR 1 cut(s) 1354
BsaBI GATNNNNATC 1 cut(s) 1166
BsaHI GRCGYC 2 cut(s) 817, 1684
BsaI GGTCTC 1 cut(s) 1383
BsaJI CCNNGG 4 cut(s) 111, 390, 1205, 1995
BsaWI WCCGGW 1 cut(s) 851
BsaXI ACNNNNNCTCC 8 cut(s) 68, 98, 293, 323, 367, 397, 422, 452
Bsc4I CCNNNNNNNGG 3 cut(s) 372, 858, 1423
Bse1I ACTGG 5 cut(s) 183, 525, 669, 719, 1684
Bse3DI GCAATG 2 cut(s) 581, 1944
Bse8I GATNNNNATC 1 cut(s) 1166
BseBI CCWGG 3 cut(s) 999, 1515, 1916
BseDI CCNNGG 4 cut(s) 111, 390, 1205, 1995
BseGI GGATG 8 cut(s) 124, 187, 289, 359, 513, 1193, 1554, 1963
BseJI GATNNNNATC 1 cut(s) 1166
BseLI CCNNNNNNNGG 3 cut(s) 372, 858, 1423
BseMI GCAATG 2 cut(s) 581, 1944
BseMII CTCAG 3 cut(s) 588, 1301, 1775
BseNI ACTGG 5 cut(s) 183, 525, 669, 719, 1684
BseRI GAGGAG 2 cut(s) 47, 1459
BseSI GKGCMC 1 cut(s) 322
BseXI GCAGC 3 cut(s) 680, 775, 1465
Bsh1236I CGCG 1 cut(s) 399
BshFI GGCC 8 cut(s) 110, 389, 808, 887, 1204, 1455, 1513, 1946
BsiHKAI GWGCWC 3 cut(s) 322, 484, 1581
BsiHKCI CYCGRG 2 cut(s) 268, 483
BsiSI CCGG 2 cut(s) 852, 1893
BslFI GGGAC 2 cut(s) 1439, 1556
BslI CCNNNNNNNGG 3 cut(s) 372, 858, 1423
BsmAI GTCTC 3 cut(s) 1310, 1383, 1695
BsmBI CGTCTC 1 cut(s) 1695
BsmFI GGGAC 2 cut(s) 1439, 1556
BsnI GGCC 8 cut(s) 110, 389, 808, 887, 1204, 1455, 1513, 1946
Bso31I GGTCTC 1 cut(s) 1383
BsoBI CYCGRG 2 cut(s) 268, 483
Bsp1286I GDGCHC 3 cut(s) 322, 484, 1581
Bsp1407I TGTACA 1 cut(s) 1437
BspACI CCGC 3 cut(s) 511, 1498, 1943
BspANI GGCC 8 cut(s) 110, 389, 808, 887, 1204, 1455, 1513, 1946
BspCNI CTCAG 3 cut(s) 589, 1302, 1776
BspFNI CGCG 1 cut(s) 399
BspHI TCATGA 1 cut(s) 1170
BspLI GGNNCC 7 cut(s) 829, 850, 1071, 1415, 1427, 1572, 1993
BspPI GGATC 8 cut(s) 69, 387, 822, 835, 843, 856, 1659, 1884
BspQI GCTCTTC 1 cut(s) 1586
BspTNI GGTCTC 1 cut(s) 1383
BsrDI GCAATG 2 cut(s) 581, 1944
BsrGI TGTACA 1 cut(s) 1437
BsrI ACTGG 5 cut(s) 183, 525, 669, 719, 1684
BssECI CCNNGG 4 cut(s) 111, 390, 1205, 1995
BssNI GRCGYC 2 cut(s) 817, 1684
BssT1I CCWWGG 2 cut(s) 390, 1995
Bst2UI CCWGG 3 cut(s) 999, 1515, 1916
Bst4CI ACNGT 1 cut(s) 643
Bst6I CTCTTC 3 cut(s) 225, 1022, 1586
BstACI GRCGYC 2 cut(s) 817, 1684
BstAPI GCANNNNNTGC 1 cut(s) 785
BstAUI TGTACA 1 cut(s) 1437
BstBAI YACGTR 1 cut(s) 1354
BstC8I GCNNGC 4 cut(s) 124, 650, 654, 673
BstDEI CTNAG 4 cut(s) 597, 1310, 1421, 1784
BstDSI CCRYGG 2 cut(s) 111, 1205
BstF5I GGATG 8 cut(s) 124, 187, 289, 359, 513, 1193, 1554, 1963
BstFNI CGCG 1 cut(s) 399
BstHHI GCGC 1 cut(s) 1078
BstMAI GTCTC 3 cut(s) 1310, 1383, 1695
BstMWI GCNNNNNNNGC 4 cut(s) 488, 668, 785, 1943
BstNI CCWGG 3 cut(s) 999, 1515, 1916
BstNSI RCATGY 5 cut(s) 593, 656, 770, 916, 1783
BstSCI CCNGG 4 cut(s) 997, 1513, 1891, 1914
BstSFI CTRYAG 1 cut(s) 982
BstSLI GKGCMC 1 cut(s) 322
BstSNI TACGTA 1 cut(s) 1354
BstUI CGCG 1 cut(s) 399
BstV1I GCAGC 3 cut(s) 680, 775, 1465
BstX2I RGATCY 4 cut(s) 827, 848, 1855, 1876
BstXI CCANNNNNNTGG 1 cut(s) 883
BstYI RGATCY 4 cut(s) 827, 848, 1855, 1876
BsuRI GGCC 8 cut(s) 110, 389, 808, 887, 1204, 1455, 1513, 1946
BtgI CCRYGG 2 cut(s) 111, 1205
BtgZI GCGATG 1 cut(s) 681
BtsCI GGATG 8 cut(s) 124, 187, 289, 359, 513, 1193, 1554, 1963
BtsIMutI CAGTG 4 cut(s) 176, 662, 790, 1647
Cac8I GCNNGC 4 cut(s) 124, 650, 654, 673
CciI TCATGA 1 cut(s) 1170
CfoI GCGC 1 cut(s) 1078
Cfr13I GGNCC 7 cut(s) 947, 1334, 1426, 1453, 1570, 1908, 1992
CseI GACGC 2 cut(s) 825, 1626
Csp6I GTAC 6 cut(s) 142, 304, 722, 940, 1438, 1744
CviQI GTAC 6 cut(s) 142, 304, 722, 940, 1438, 1744
DdeI CTNAG 4 cut(s) 597, 1310, 1421, 1784
DraI TTTAAA 2 cut(s) 534, 1725
DriI GACNNNNNGTC 1 cut(s) 1683
EaeI YGGCCR 3 cut(s) 387, 885, 1202
Eam1104I CTCTTC 3 cut(s) 225, 1022, 1586
Eam1105I GACNNNNNGTC 1 cut(s) 1683
EarI CTCTTC 3 cut(s) 225, 1022, 1586
Ecl136II GAGCTC 1 cut(s) 482
Eco105I TACGTA 1 cut(s) 1354
Eco130I CCWWGG 2 cut(s) 390, 1995
Eco147I AGGCCT 1 cut(s) 808
Eco24I GRGCYC 1 cut(s) 484
Eco31I GGTCTC 1 cut(s) 1383
Eco32I GATATC 1 cut(s) 1608
Eco47I GGWCC 6 cut(s) 947, 1334, 1426, 1570, 1908, 1992
Eco53kI GAGCTC 1 cut(s) 482
Eco57I CTGAAG 2 cut(s) 710, 1494
Eco88I CYCGRG 2 cut(s) 268, 483
EcoICRI GAGCTC 1 cut(s) 482
EcoO109I RGGNCCY 3 cut(s) 1426, 1453, 1908
EcoRII CCWGG 3 cut(s) 997, 1513, 1914
EcoRV GATATC 1 cut(s) 1608
EcoT14I CCWWGG 2 cut(s) 390, 1995
EcoT22I ATGCAT 1 cut(s) 1273
EcoT38I GRGCYC 1 cut(s) 484
ErhI CCWWGG 2 cut(s) 390, 1995
Esp3I CGTCTC 1 cut(s) 1695
FaqI GGGAC 2 cut(s) 1439, 1556
FauI CCCGC 1 cut(s) 504
FbaI TGATCA 3 cut(s) 1164, 1192, 1831
Fnu4HI GCNGC 4 cut(s) 669, 789, 1479, 1944
FokI GGATG 8 cut(s) 131, 194, 296, 346, 520, 1200, 1561, 1970
FriOI GRGCYC 1 cut(s) 484
Fsp4HI GCNGC 4 cut(s) 669, 789, 1479, 1944
FspBI CTAG 8 cut(s) 227, 290, 893, 932, 1037, 1121, 1410, 1812
GlaI GCGC 1 cut(s) 1077
GluI GCNGC 4 cut(s) 669, 789, 1479, 1944
GsuI CTGGAG 3 cut(s) 101, 1400, 1536
HaeIII GGCC 8 cut(s) 110, 389, 808, 887, 1204, 1455, 1513, 1946
HapII CCGG 2 cut(s) 852, 1893
HgaI GACGC 2 cut(s) 825, 1626
HhaI GCGC 1 cut(s) 1078
Hin1I GRCGYC 2 cut(s) 817, 1684
Hin6I GCGC 1 cut(s) 1076
HinP1I GCGC 1 cut(s) 1076
HincII GTYRAC 2 cut(s) 1063, 1147
HindII GTYRAC 2 cut(s) 1063, 1147
HindIII AAGCTT 2 cut(s) 453, 673
HinfI GANTC 4 cut(s) 129, 713, 1646, 1773
HpaII CCGG 2 cut(s) 852, 1893
HphI GGTGA 1 cut(s) 708
Hpy166II GTNNAC 6 cut(s) 320, 526, 942, 1063, 1147, 1438
Hpy188I TCNGA 9 cut(s) 479, 712, 729, 1311, 1474, 1612, 1651, 1667, 1797
Hpy8I GTNNAC 6 cut(s) 320, 526, 942, 1063, 1147, 1438
Hpy99I CGWCG 1 cut(s) 819
HpyCH4III ACNGT 1 cut(s) 643
HpyCH4IV ACGT 3 cut(s) 1353, 1684, 1704
HpyF10VI GCNNNNNNNGC 4 cut(s) 488, 668, 785, 1943
HpyF3I CTNAG 4 cut(s) 597, 1310, 1421, 1784
HpySE526I ACGT 3 cut(s) 1353, 1684, 1704
Hsp92I GRCGYC 2 cut(s) 817, 1684
HspAI GCGC 1 cut(s) 1076
Ksp22I TGATCA 3 cut(s) 1164, 1192, 1831
LguI GCTCTTC 1 cut(s) 1586
LmnI GCTCC 4 cut(s) 76, 694, 1075, 1419
Lsp1109I GCAGC 3 cut(s) 680, 775, 1465
LweI GCATC 8 cut(s) 4, 109, 322, 498, 676, 1042, 1258, 1908
MaeI CTAG 8 cut(s) 227, 290, 893, 932, 1037, 1121, 1410, 1812
MaeII ACGT 3 cut(s) 1353, 1684, 1704
MaeIII GTNAC 3 cut(s) 592, 1295, 1837
MboII GAAGA 6 cut(s) 242, 413, 829, 1039, 1573, 1706
MfeI CAATTG 3 cut(s) 1196, 1394, 1655
MflI RGATCY 4 cut(s) 827, 848, 1855, 1876
MhlI GDGCHC 3 cut(s) 322, 484, 1581
MlsI TGGCCA 2 cut(s) 389, 887
MluNI TGGCCA 2 cut(s) 389, 887
MlyI GAGTC 1 cut(s) 1655
MmeI TCCRAC 5 cut(s) 54, 408, 423, 480, 1629
Mox20I TGGCCA 2 cut(s) 389, 887
Mph1103I ATGCAT 1 cut(s) 1273
MroXI GAANNNNTTC 1 cut(s) 768
MscI TGGCCA 2 cut(s) 389, 887
MslI CAYNNNNRTG 2 cut(s) 839, 1038
Msp20I TGGCCA 2 cut(s) 389, 887
MspI CCGG 2 cut(s) 852, 1893
MspR9I CCNGG 4 cut(s) 999, 1515, 1893, 1916
MunI CAATTG 3 cut(s) 1196, 1394, 1655
MvaI CCWGG 3 cut(s) 999, 1515, 1916
MvnI CGCG 1 cut(s) 399
MwoI GCNNNNNNNGC 4 cut(s) 488, 668, 785, 1943
NciI CCSGG 1 cut(s) 1893
NlaIV GGNNCC 7 cut(s) 829, 850, 1071, 1415, 1427, 1572, 1993
NmuCI GTSAC 2 cut(s) 592, 1837
NsiI ATGCAT 1 cut(s) 1273
NspI RCATGY 5 cut(s) 593, 656, 770, 916, 1783
PaeI GCATGC 1 cut(s) 656
PaeR7I CTCGAG 1 cut(s) 268
PagI TCATGA 1 cut(s) 1170
PceI AGGCCT 1 cut(s) 808
PciI ACATGT 2 cut(s) 589, 766
PciSI GCTCTTC 1 cut(s) 1586
PdmI GAANNNNTTC 1 cut(s) 768
PfeI GAWTC 3 cut(s) 129, 713, 1773
PfoI TCCNGGA 1 cut(s) 1914
PkrI GCNGC 4 cut(s) 670, 790, 1480, 1945
PleI GAGTC 1 cut(s) 1654
PpsI GAGTC 1 cut(s) 1654
Ppu21I YACGTR 1 cut(s) 1354
PpuMI RGGWCCY 2 cut(s) 1426, 1908
PscI ACATGT 2 cut(s) 589, 766
PshBI ATTAAT 2 cut(s) 740, 1739
Psp124BI GAGCTC 1 cut(s) 484
Psp5II RGGWCCY 2 cut(s) 1426, 1908
Psp6I CCWGG 3 cut(s) 997, 1513, 1914
PspGI CCWGG 3 cut(s) 997, 1513, 1914
PspN4I GGNNCC 7 cut(s) 829, 850, 1071, 1415, 1427, 1572, 1993
PspPI GGNCC 7 cut(s) 947, 1334, 1426, 1453, 1570, 1908, 1992
PspPPI RGGWCCY 2 cut(s) 1426, 1908
PsrI GAACNNNNNNTAC 2 cut(s) 756, 788
PsuI RGATCY 4 cut(s) 827, 848, 1855, 1876
RsaI GTAC 6 cut(s) 143, 305, 723, 941, 1439, 1745
RsaNI GTAC 6 cut(s) 142, 304, 722, 940, 1438, 1744
RseI CAYNNNNRTG 2 cut(s) 839, 1038
SacI GAGCTC 1 cut(s) 484
SapI GCTCTTC 1 cut(s) 1586
SatI GCNGC 4 cut(s) 669, 789, 1479, 1944
Sau96I GGNCC 7 cut(s) 947, 1334, 1426, 1453, 1570, 1908, 1992
ScaI AGTACT 1 cut(s) 723
SchI GAGTC 1 cut(s) 1655
ScrFI CCNGG 4 cut(s) 999, 1515, 1893, 1916
SduI GDGCHC 3 cut(s) 322, 484, 1581
SfaNI GCATC 8 cut(s) 4, 109, 322, 498, 676, 1042, 1258, 1908
SfcI CTRYAG 1 cut(s) 982
Sfr274I CTCGAG 1 cut(s) 268
SinI GGWCC 6 cut(s) 947, 1334, 1426, 1570, 1908, 1992
SlaI CTCGAG 1 cut(s) 268
SmiI ATTTAAAT 1 cut(s) 534
SmiMI CAYNNNNRTG 2 cut(s) 839, 1038
SmlI CTYRAG 1 cut(s) 268
SmoI CTYRAG 1 cut(s) 268
SnaBI TACGTA 1 cut(s) 1354
SphI GCATGC 1 cut(s) 656
SseBI AGGCCT 1 cut(s) 808
SsiI CCGC 3 cut(s) 511, 1498, 1943
SspI AATATT 1 cut(s) 1183
SspMI CTAG 8 cut(s) 227, 290, 893, 932, 1037, 1121, 1410, 1812
SstI GAGCTC 1 cut(s) 484
StuI AGGCCT 1 cut(s) 808
StyD4I CCNGG 4 cut(s) 997, 1513, 1891, 1914
StyI CCWWGG 2 cut(s) 390, 1995
SwaI ATTTAAAT 1 cut(s) 534
TaaI ACNGT 1 cut(s) 643
TaiI ACGT 3 cut(s) 1356, 1687, 1707
TaqI TCGA 8 cut(s) 51, 99, 269, 342, 548, 797, 1522, 1584
TatI WGTACW 4 cut(s) 303, 721, 939, 1437
TauI GCSGC 1 cut(s) 1946
TfiI GAWTC 3 cut(s) 129, 713, 1773
TscAI CASTG 4 cut(s) 183, 669, 790, 1647
TseFI GTSAC 2 cut(s) 592, 1837
TseI GCWGC 3 cut(s) 668, 788, 1478
Tsp45I GTSAC 2 cut(s) 592, 1837
TspDTI ATGAA 8 cut(s) 224, 300, 351, 600, 750, 823, 829, 1242
TspRI CASTG 4 cut(s) 183, 669, 790, 1647
VneI GTGCAC 1 cut(s) 318
VpaK11BI GGWCC 6 cut(s) 947, 1334, 1426, 1570, 1908, 1992
VspI ATTAAT 2 cut(s) 740, 1739
XapI RAATTY 3 cut(s) 556, 952, 1790
XbaI TCTAGA 2 cut(s) 226, 931
XceI RCATGY 5 cut(s) 593, 656, 770, 916, 1783
XhoI CTCGAG 1 cut(s) 268
XmnI GAANNNNTTC 1 cut(s) 768
XspI CTAG 8 cut(s) 227, 290, 893, 932, 1037, 1121, 1410, 1812
ZraI GACGTC 1 cut(s) 1685
ZrmI AGTACT 1 cut(s) 723
Zsp2I ATGCAT 1 cut(s) 1273
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.