Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr5

Orthogroup ID

OG0002369

Physical Location & Seq

Genomic Coordinates Forward (+)

11602969 .. 11606772

Gene Structure 3804 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw5G010560.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1743 bp

ATGGGGATGAGCGGAACGGAACCGAGCGGCGAGGGACTGAAGAGGCGGGGGTGTTCGTGCGGAAAGAATGATTTTCTCCCGGAGGAGTCGTTCGAGAGCTGGGGCAATTACGCCAATGCGCTCCGGTCGACTCCGGCGAGGTTCAAGGACAGGTTCTTCACGCGGTCCACCTACAGCACCGAGCTGGTGGAGGTGAAGGCGCGGAGCCAGCACGAGATGAAGAAGACGCTTGACTGGTGGGACCTCATCTGGTTCGGGCTCGGAGCTGTCATCGGCGCTGGAATCTTCGTCCTCACTGGATTCGAGGCCAAGAAACACGCCGGACCCGCCGTCGTCGTGTCCTACGTCGTCTCCGGCGTCTCCGCCTTGCTCTCTGTTTTCTGTTACACAGAGTTCGCCGTCGAGATTCCCGTTGCAGGCGGCTCATTTGCCTACCTAAGAGTGGAGCTTGGGGACTTCGTGGCCTACATTGCAGCAGGCAACATCCTTCTCGAATATGTCATAGGCGGGGCGGCCGTTGCGCGTTCGTGGACCTCCTACTTCACCTCCCTATGCAACCAGGACGATTCCAATGCTTTCAGAATCACTGTCCACGGTTGGTCGGAGGACTACAAGTACCTGGACCCCATTGCCATTGGGGTAATCATCTTTATCTGCATACTCGCCGTCTTGAGCACAAAGGGCTCCTCGCACCTCAACAGCGTCGCCTCCATAGTCCACGTCATCGTCATTCTCTTCATCATCATAGCAGGTCTCCTTGCAGGTCTCACCAAAGCAGATACTGACAACTACAAGGAGTTTGCCCCAAATGGTGCTCGCGGCATCTTCCAAGCCTCGGCAGTTCTCTTCTTTGCATACGTTGGATTTGACGCCGTTTCAACCATGGCCGAAGAGACCAAGAATCCTGCTCGAGACATCCCAATAGGGCTGGTTGGGTCCATGGTGATCACCACCACTCTTTATTGCTTGCTAGCCGTGACACTCTGTCTTATGGTACCGTATCAGGTAATTGATGAGAACGCTCCATTTTCAAAAGCGTTTGAGACAGTTGGTATGGATTGGGCCAAGTATGTGGTTGCAGCTGGAGCTTTAAAAGGCATGACTAGTGTTTTGCTCGTCGGGGCAGTGGGTCAGGCCCGGTATTTGACCCACATTGCCCGAACCCACATGATGCCCCCATGGTTTGCTCAAGTTGATGCCAAGACAGGTACTCCAGTCCATGCCACAATTGTCATGCTCGCAGCCACAGCTGTAATCGCTTTCTTCACCAGCCTCAACATTCTTGCTAACCTTCTCTCCATTTCTACGCTATTCATCTTCAGCCTCGTTGCCATTGCTCTACTCGTACGCCGTTACTATGTAACCGGCGTGACCACGGATGCAAACAGGAATAAGCTCATACTGTGCATTGTAATGATACTCGGGGGTGCAATTGCCACTTCTGCTTACAGGGCTGTCAGCCATGATTGGGTAGGGTATTGCGTGACGGCTCCTATTTGGTTCTTGGGGACTTTGGGGATTTGGTTTCTTGTTCCGCAAGCAAGGAGTCCAAAGGTTTGGGGGGTGCCATTGGTTCCATGGTTTCCTTCACTTTCAATTGGCATCAACATTTTCTTGCTTGGTTCGATTGATGGTGCTTCTTTTGTCAGGTTTGCAGTATGGACTGTGATTACCTTAGTTTACTACATTTTCTTTGGGTTGCATGCTTCATATGACACAGCAAAGGACTCTGAAACTAATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005623 GO:0005886 GO:0016020 GO:0044464 GO:0071944

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AA_permease_2 AA_permease_C

Protein Analysis

580

Amino Acids

62.97

Weight (kDa)

6.79

Isoelectric Point (pI)

29.48

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AA_permease_2	PF13520	77 - 451	3.6e-54	Amino acid permease
AA_permease	PF00324	82 - 451	4.2e-35	Amino acid permease
AA_permease_C	PF13906	520 - 570	6.2e-17	C-terminus of AA_permease

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002369)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G21120 AT4G21120
fragaria_vesca	FvH4_3g09930 FvH4_3g09940
malus_domestica	MD05G1274600.v1.1 MD05G1274700.v1.1 MD05G1274900.v1.1 MD10G1254300.v1.1
prunus_persica	Prupe.4G089000_v2.0.a1 Prupe.4G089100_v2.0.a1
pyrus_communis	pycom05g25610 pycom05g25630 pycom10g21000
rosa_chinensis	RchiOBHm_Chr5g0015621 RchiOBHm_Chr5g0015661 RchiOBHm_Chr5g0015691 RchiOBHm_Chr5g0015791
rosa_laevigata	RLG00000032214 RLG00000032217 RLG00000032219
rosa_multiflora	Rmu_sc0000843.1_g000004 Rmu_sc0000843.1_g000008 Rmu_sc0003230.1_g000003 Rmu_sc0003230.1_g000005
rosa_roxburghii	Rroxscaffold_1G00060830
rosa_rugosa	Rorug01G0078300 Rorug05G0029000 Rorug05G0029100
rosa_samantha	Rh5AG122300 Rh5AG122400 Rh5AG122600 Rh5BG120900 Rh5BG121200 Rh5BG121700 Rh5CG131300 Rh5CG131900 Rh5CG132800 Rh5DG119900 Rh5DG120600
rosa_wichuraiana	Rw5G010550 Rw5G010560 Rw5G010570

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	740, 752
Acc65I	GGTACC	1 cut(s)	994
AccB1I	GGYRCC	2 cut(s)	994, 1564
AccBSI	CCGCTC	2 cut(s)	12, 27
AccI	GTMKAC	1 cut(s)	128
AccII	CGCG	4 cut(s)	163, 202, 523, 819
AcoI	YGGCCR	2 cut(s)	513, 885
AcuI	CTGAAG	2 cut(s)	59, 1303
AcyI	GRCGYC	2 cut(s)	357, 870
AfaI	GTAC	4 cut(s)	617, 996, 1210, 1347
AfiI	CCNNNNNNNGG	4 cut(s)	416, 442, 835, 1468
AgsI	TTSAA	4 cut(s)	145, 879, 1032, 1596
AhdI	GACNNNNNGTC	2 cut(s)	329, 984
AhlI	ACTAGT	1 cut(s)	1103
AjiI	CACGTC	1 cut(s)	721
AjnI	CCWGG	2 cut(s)	558, 618
AloI	GAACNNNNNNTCC	2 cut(s)	74, 106
AluBI	AGCT	8 cut(s)	99, 184, 266, 448, 1082, 1088, 1250, 1396
AluI	AGCT	8 cut(s)	99, 184, 266, 448, 1082, 1088, 1250, 1396
Alw21I	GWGCWC	2 cut(s)	677, 817
Alw26I	GTCTC	7 cut(s)	355, 364, 758, 770, 887, 906, 1037
AlwNI	CAGNNNCTG	1 cut(s)	782
Ama87I	CYCGRG	2 cut(s)	909, 1421
AoxI	GGCC	6 cut(s)	306, 462, 513, 885, 1062, 1134
ApeKI	GCWGC	3 cut(s)	473, 1079, 1241
ArsI	GACNNNNNNTTYG	2 cut(s)	1093, 1125
Asp718I	GGTACC	1 cut(s)	994
AspLEI	GCGC	4 cut(s)	121, 202, 278, 523
AspS9I	GGNCC	8 cut(s)	165, 241, 323, 531, 622, 936, 1062, 1135
AsuC2I	CCSGG	2 cut(s)	80, 1138
AsuHPI	GGTGA	6 cut(s)	205, 535, 760, 940, 955, 1258
AsuNHI	GCTAGC	1 cut(s)	970
AvaI	CYCGRG	2 cut(s)	909, 1421
AvaII	GGWCC	6 cut(s)	165, 241, 323, 531, 622, 936
BaeI	ACNNNNGTAYC	2 cut(s)	1200, 1233
BanI	GGYRCC	2 cut(s)	994, 1564
BanII	GRGCYC	2 cut(s)	261, 686
BauI	CACGAG	1 cut(s)	212
BbsI	GAAGAC	1 cut(s)	230
Bbv12I	GWGCWC	2 cut(s)	677, 817
BbvI	GCAGC	3 cut(s)	485, 1091, 1253
BccI	CCATC	1 cut(s)	1625
BceAI	ACGGC	8 cut(s)	314, 383, 500, 650, 857, 959, 1335, 1503
BcgI	CGANNNNNNTGC	2 cut(s)	554, 588
BciT130I	CCWGG	2 cut(s)	560, 620
BclI	TGATCA	1 cut(s)	945
BcnI	CCSGG	2 cut(s)	80, 1138
BcoDI	GTCTC	7 cut(s)	355, 364, 758, 770, 887, 906, 1037
BcuI	ACTAGT	1 cut(s)	1103
BfaI	CTAG	2 cut(s)	971, 1104
BfmI	CTRYAG	1 cut(s)	172
BfoI	RGCGCY	1 cut(s)	279
BfuAI	ACCTGC	2 cut(s)	740, 752
BisI	GCNGC	7 cut(s)	28, 421, 474, 513, 820, 1080, 1242
BlsI	GCNGC	7 cut(s)	29, 422, 475, 514, 821, 1081, 1243
Bme1390I	CCNGG	4 cut(s)	80, 560, 620, 1138
Bme18I	GGWCC	6 cut(s)	165, 241, 323, 531, 622, 936
BmeRI	GACNNNNNGTC	2 cut(s)	329, 984
BmeT110I	CYCGRG	2 cut(s)	909, 1421
BmgBI	CACGTC	1 cut(s)	721
BmgT120I	GGNCC	8 cut(s)	165, 241, 323, 531, 622, 936, 1062, 1135
BmrFI	CCNGG	4 cut(s)	80, 560, 620, 1138
BmsI	GCATC	5 cut(s)	831, 1161, 1186, 1369, 1611
BmtI	GCTAGC	1 cut(s)	974
BpiI	GAAGAC	1 cut(s)	230
BpmI	CTGGAG	2 cut(s)	1104, 1197
BpuEI	CTTGAG	2 cut(s)	691, 1173
BpuMI	CCSGG	2 cut(s)	80, 1138
BsaHI	GRCGYC	2 cut(s)	357, 870
BsaI	GGTCTC	3 cut(s)	758, 770, 887
BsaJI	CCNNGG	7 cut(s)	592, 834, 882, 939, 1178, 1374, 1577
BsaWI	WCCGGW	1 cut(s)	123
Bsc4I	CCNNNNNNNGG	4 cut(s)	416, 442, 835, 1468
Bse118I	RCCGGY	1 cut(s)	1364
Bse1I	ACTGG	3 cut(s)	239, 301, 1214
Bse3DI	GCAATG	4 cut(s)	468, 627, 1152, 1332
BseBI	CCWGG	2 cut(s)	560, 620
BseDI	CCNNGG	7 cut(s)	592, 834, 882, 939, 1178, 1374, 1577
BseGI	GGATG	4 cut(s)	12, 483, 915, 1384
BseLI	CCNNNNNNNGG	4 cut(s)	416, 442, 835, 1468
BseMI	GCAATG	4 cut(s)	468, 627, 1152, 1332
BseNI	ACTGG	3 cut(s)	239, 301, 1214
BseRI	GAGGAG	2 cut(s)	98, 676
BseX3I	CGGCCG	1 cut(s)	513
BseXI	GCAGC	3 cut(s)	485, 1091, 1253
BseYI	CCCAGC	1 cut(s)	99
Bsh1236I	CGCG	4 cut(s)	163, 202, 523, 819
Bsh1285I	CGRYCG	2 cut(s)	128, 516
BshFI	GGCC	6 cut(s)	308, 464, 515, 887, 1064, 1136
BshNI	GGYRCC	2 cut(s)	994, 1564
BsiEI	CGRYCG	2 cut(s)	128, 516
BsiHKAI	GWGCWC	2 cut(s)	677, 817
BsiHKCI	CYCGRG	2 cut(s)	909, 1421
BsiSI	CCGG	7 cut(s)	80, 124, 134, 321, 354, 1138, 1365
BsiWI	CGTACG	1 cut(s)	1345
BslFI	GGGAC	4 cut(s)	48, 254, 467, 1522
BslI	CCNNNNNNNGG	4 cut(s)	416, 442, 835, 1468
BsmAI	GTCTC	7 cut(s)	355, 364, 758, 770, 887, 906, 1037
BsmBI	CGTCTC	2 cut(s)	355, 364
BsmFI	GGGAC	4 cut(s)	48, 254, 467, 1522
BsnI	GGCC	6 cut(s)	308, 464, 515, 887, 1064, 1136
Bso31I	GGTCTC	3 cut(s)	758, 770, 887
BsoBI	CYCGRG	2 cut(s)	909, 1421
Bsp1286I	GDGCHC	4 cut(s)	261, 677, 686, 817
Bsp143I	GATC	1 cut(s)	945
Bsp19I	CCATGG	4 cut(s)	882, 939, 1178, 1577
BspANI	GGCC	6 cut(s)	308, 464, 515, 887, 1064, 1136
BspFNI	CGCG	4 cut(s)	163, 202, 523, 819
BspMI	ACCTGC	2 cut(s)	740, 752
BspOI	GCTAGC	1 cut(s)	974
BspT107I	GGYRCC	2 cut(s)	994, 1564
BspTNI	GGTCTC	3 cut(s)	758, 770, 887
BsrBI	CCGCTC	2 cut(s)	12, 27
BsrDI	GCAATG	4 cut(s)	468, 627, 1152, 1332
BsrFI	RCCGGY	1 cut(s)	1364
BsrI	ACTGG	3 cut(s)	239, 301, 1214
BssAI	RCCGGY	1 cut(s)	1364
BssECI	CCNNGG	7 cut(s)	592, 834, 882, 939, 1178, 1374, 1577
BssMI	GATC	1 cut(s)	945
BssNI	GRCGYC	2 cut(s)	357, 870
BssSI	CACGAG	1 cut(s)	212
BssT1I	CCWWGG	4 cut(s)	882, 939, 1178, 1577
Bst2BI	CACGAG	1 cut(s)	212
Bst2UI	CCWGG	2 cut(s)	560, 620
Bst4CI	ACNGT	6 cut(s)	589, 596, 999, 1048, 1404, 1666
Bst6I	CTCTTC	4 cut(s)	35, 740, 851, 885
BstACI	GRCGYC	2 cut(s)	357, 870
BstC8I	GCNNGC	9 cut(s)	209, 418, 478, 817, 968, 972, 1239, 1539, 1704
BstDEI	CTNAG	2 cut(s)	437, 1675
BstDSI	CCRYGG	6 cut(s)	592, 882, 939, 1178, 1374, 1577
BstF5I	GGATG	4 cut(s)	12, 483, 915, 1384
BstFNI	CGCG	4 cut(s)	163, 202, 523, 819
BstH2I	RGCGCY	1 cut(s)	279
BstHHI	GCGC	4 cut(s)	121, 202, 278, 523
BstKTI	GATC	1 cut(s)	948
BstMAI	GTCTC	7 cut(s)	355, 364, 758, 770, 887, 906, 1037
BstMBI	GATC	1 cut(s)	945
BstMCI	CGRYCG	2 cut(s)	128, 516
BstNI	CCWGG	2 cut(s)	560, 620
BstNSI	RCATGY	1 cut(s)	1706
BstSCI	CCNGG	4 cut(s)	78, 558, 618, 1136
BstSFI	CTRYAG	1 cut(s)	172
BstUI	CGCG	4 cut(s)	163, 202, 523, 819
BstV1I	GCAGC	3 cut(s)	485, 1091, 1253
BstV2I	GAAGAC	1 cut(s)	230
BstXI	CCANNNNNNTGG	2 cut(s)	1072, 1557
BstZI	CGGCCG	1 cut(s)	513
BsuRI	GGCC	6 cut(s)	308, 464, 515, 887, 1064, 1136
BtgI	CCRYGG	6 cut(s)	592, 882, 939, 1178, 1374, 1577
BtrI	CACGTC	1 cut(s)	721
BtsCI	GGATG	4 cut(s)	12, 483, 915, 1384
BtsI	GCAGTG	1 cut(s)	1131
BtsIMutI	CAGTG	3 cut(s)	294, 585, 1131
BveI	ACCTGC	2 cut(s)	740, 752
Cac8I	GCNNGC	9 cut(s)	209, 418, 478, 817, 968, 972, 1239, 1539, 1704
CaiI	CAGNNNCTG	1 cut(s)	782
CfoI	GCGC	4 cut(s)	121, 202, 278, 523
Cfr10I	RCCGGY	1 cut(s)	1364
Cfr13I	GGNCC	8 cut(s)	165, 241, 323, 531, 622, 936, 1062, 1135
CseI	GACGC	4 cut(s)	235, 346, 691, 878
Csp6I	GTAC	4 cut(s)	616, 995, 1209, 1346
CviQI	GTAC	4 cut(s)	616, 995, 1209, 1346
DdeI	CTNAG	2 cut(s)	437, 1675
DpnI	GATC	1 cut(s)	947
DpnII	GATC	1 cut(s)	945
DraI	TTTAAA	1 cut(s)	1092
DriI	GACNNNNNGTC	2 cut(s)	329, 984
EaeI	YGGCCR	2 cut(s)	513, 885
EagI	CGGCCG	1 cut(s)	513
Eam1104I	CTCTTC	4 cut(s)	35, 740, 851, 885
Eam1105I	GACNNNNNGTC	2 cut(s)	329, 984
EarI	CTCTTC	4 cut(s)	35, 740, 851, 885
EciI	GGCGGA	1 cut(s)	352
EclXI	CGGCCG	1 cut(s)	513
Eco130I	CCWWGG	4 cut(s)	882, 939, 1178, 1577
Eco24I	GRGCYC	2 cut(s)	261, 686
Eco31I	GGTCTC	3 cut(s)	758, 770, 887
Eco47I	GGWCC	6 cut(s)	165, 241, 323, 531, 622, 936
Eco52I	CGGCCG	1 cut(s)	513
Eco57I	CTGAAG	2 cut(s)	59, 1303
Eco88I	CYCGRG	2 cut(s)	909, 1421
EcoO109I	RGGNCCY	1 cut(s)	241
EcoRII	CCWGG	2 cut(s)	558, 618
EcoT14I	CCWWGG	4 cut(s)	882, 939, 1178, 1577
EcoT38I	GRGCYC	2 cut(s)	261, 686
ErhI	CCWWGG	4 cut(s)	882, 939, 1178, 1577
Esp3I	CGTCTC	2 cut(s)	355, 364
FaqI	GGGAC	4 cut(s)	48, 254, 467, 1522
FauI	CCCGC	3 cut(s)	39, 334, 500
FauNDI	CATATG	1 cut(s)	1711
FbaI	TGATCA	1 cut(s)	945
FblI	GTMKAC	1 cut(s)	128
Fnu4HI	GCNGC	7 cut(s)	28, 421, 474, 513, 820, 1080, 1242
FokI	GGATG	4 cut(s)	19, 470, 902, 1391
FriOI	GRGCYC	2 cut(s)	261, 686
Fsp4HI	GCNGC	7 cut(s)	28, 421, 474, 513, 820, 1080, 1242
FspBI	CTAG	2 cut(s)	971, 1104
GlaI	GCGC	4 cut(s)	120, 201, 277, 522
GluI	GCNGC	7 cut(s)	28, 421, 474, 513, 820, 1080, 1242
GsaI	CCCAGC	1 cut(s)	103
GsuI	CTGGAG	2 cut(s)	1104, 1197
HaeII	RGCGCY	1 cut(s)	279
HaeIII	GGCC	6 cut(s)	308, 464, 515, 887, 1064, 1136
HapII	CCGG	7 cut(s)	80, 124, 134, 321, 354, 1138, 1365
HgaI	GACGC	4 cut(s)	235, 346, 691, 878
HhaI	GCGC	4 cut(s)	121, 202, 278, 523
Hin1I	GRCGYC	2 cut(s)	357, 870
Hin6I	GCGC	4 cut(s)	119, 200, 276, 521
HinP1I	GCGC	4 cut(s)	119, 200, 276, 521
HincII	GTYRAC	1 cut(s)	129
HindII	GTYRAC	1 cut(s)	129
HpaII	CCGG	7 cut(s)	80, 124, 134, 321, 354, 1138, 1365
HphI	GGTGA	6 cut(s)	205, 535, 760, 940, 955, 1258
Hpy166II	GTNNAC	6 cut(s)	129, 168, 531, 592, 718, 1681
Hpy188I	TCNGA	4 cut(s)	263, 581, 604, 1732
Hpy188III	TCNNGA	5 cut(s)	94, 403, 491, 670, 911
Hpy8I	GTNNAC	6 cut(s)	129, 168, 531, 592, 718, 1681
Hpy99I	CGWCG	6 cut(s)	335, 338, 350, 404, 707, 1121
HpyAV	CCTTC	4 cut(s)	190, 497, 1301, 1596
HpyCH4III	ACNGT	6 cut(s)	589, 596, 999, 1048, 1404, 1666
HpyCH4IV	ACGT	3 cut(s)	345, 720, 858
HpyF3I	CTNAG	2 cut(s)	437, 1675
HpySE526I	ACGT	3 cut(s)	345, 720, 858
Hsp92I	GRCGYC	2 cut(s)	357, 870
HspAI	GCGC	4 cut(s)	119, 200, 276, 521
KpnI	GGTACC	1 cut(s)	998
Ksp22I	TGATCA	1 cut(s)	945
Kzo9I	GATC	1 cut(s)	945
LmnI	GCTCC	8 cut(s)	126, 204, 263, 445, 689, 1027, 1085, 1495
Lsp1109I	GCAGC	3 cut(s)	485, 1091, 1253
LweI	GCATC	5 cut(s)	831, 1161, 1186, 1369, 1611
MaeI	CTAG	2 cut(s)	971, 1104
MaeII	ACGT	3 cut(s)	345, 720, 858
MaeIII	GTNAC	6 cut(s)	383, 976, 1352, 1360, 1369, 1483
MalI	GATC	1 cut(s)	947
MbiI	CCGCTC	2 cut(s)	12, 27
MboI	GATC	1 cut(s)	945
MfeI	CAATTG	3 cut(s)	1227, 1431, 1596
MhlI	GDGCHC	4 cut(s)	261, 677, 686, 817
MluCI	AATT	6 cut(s)	106, 1008, 1227, 1431, 1596, 1738
MlyI	GAGTC	4 cut(s)	95, 124, 1555, 1721
MmeI	TCCRAC	2 cut(s)	582, 841
MseI	TTAA	2 cut(s)	1091, 1741
MslI	CAYNNNNRTG	1 cut(s)	1412
MspA1I	CMGCKG	2 cut(s)	1082, 1250
MspI	CCGG	7 cut(s)	80, 124, 134, 321, 354, 1138, 1365
MspR9I	CCNGG	4 cut(s)	80, 560, 620, 1138
MunI	CAATTG	3 cut(s)	1227, 1431, 1596
MvaI	CCWGG	2 cut(s)	560, 620
MvnI	CGCG	4 cut(s)	163, 202, 523, 819
NciI	CCSGG	2 cut(s)	80, 1138
NcoI	CCATGG	4 cut(s)	882, 939, 1178, 1577
NdeI	CATATG	1 cut(s)	1711
NdeII	GATC	1 cut(s)	945
NheI	GCTAGC	1 cut(s)	970
NmeAIII	GCCGAG	1 cut(s)	815
NmuCI	GTSAC	3 cut(s)	976, 1369, 1483
NspI	RCATGY	1 cut(s)	1706
PaeI	GCATGC	1 cut(s)	1706
PaeR7I	CTCGAG	1 cut(s)	909
PcsI	WCGNNNNNNNCGW	4 cut(s)	134, 342, 354, 408
PfeI	GAWTC	6 cut(s)	282, 300, 406, 566, 582, 901
Pfl23II	CGTACG	1 cut(s)	1345
PfoI	TCCNGGA	1 cut(s)	78
PkrI	GCNGC	7 cut(s)	29, 422, 475, 514, 821, 1081, 1243
PleI	GAGTC	4 cut(s)	94, 124, 1554, 1721
PpsI	GAGTC	4 cut(s)	94, 124, 1554, 1721
PpuMI	RGGWCCY	1 cut(s)	241
Psp5II	RGGWCCY	1 cut(s)	241
Psp6I	CCWGG	2 cut(s)	558, 618
PspFI	CCCAGC	1 cut(s)	99
PspGI	CCWGG	2 cut(s)	558, 618
PspLI	CGTACG	1 cut(s)	1345
PspPI	GGNCC	8 cut(s)	165, 241, 323, 531, 622, 936, 1062, 1135
PspPPI	RGGWCCY	1 cut(s)	241
PstNI	CAGNNNCTG	1 cut(s)	782
PvuII	CAGCTG	2 cut(s)	1082, 1250
RsaI	GTAC	4 cut(s)	617, 996, 1210, 1347
RsaNI	GTAC	4 cut(s)	616, 995, 1209, 1346
RseI	CAYNNNNRTG	1 cut(s)	1412
SalI	GTCGAC	1 cut(s)	127
SaqAI	TTAA	2 cut(s)	1091, 1741
SatI	GCNGC	7 cut(s)	28, 421, 474, 513, 820, 1080, 1242
Sau3AI	GATC	1 cut(s)	945
Sau96I	GGNCC	8 cut(s)	165, 241, 323, 531, 622, 936, 1062, 1135
SchI	GAGTC	4 cut(s)	95, 124, 1555, 1721
ScrFI	CCNGG	4 cut(s)	80, 560, 620, 1138
SduI	GDGCHC	4 cut(s)	261, 677, 686, 817
SfaNI	GCATC	5 cut(s)	831, 1161, 1186, 1369, 1611
SfcI	CTRYAG	1 cut(s)	172
Sfr274I	CTCGAG	1 cut(s)	909
SinI	GGWCC	6 cut(s)	165, 241, 323, 531, 622, 936
SlaI	CTCGAG	1 cut(s)	909
SmiMI	CAYNNNNRTG	1 cut(s)	1412
SmlI	CTYRAG	3 cut(s)	670, 909, 1188
SmoI	CTYRAG	3 cut(s)	670, 909, 1188
SpeI	ACTAGT	1 cut(s)	1103
SphI	GCATGC	1 cut(s)	1706
Sse9I	AATT	6 cut(s)	106, 1008, 1227, 1431, 1596, 1738
SspMI	CTAG	2 cut(s)	971, 1104
StyD4I	CCNGG	4 cut(s)	78, 558, 618, 1136
StyI	CCWWGG	4 cut(s)	882, 939, 1178, 1577
TaaI	ACNGT	6 cut(s)	589, 596, 999, 1048, 1404, 1666
TaiI	ACGT	3 cut(s)	348, 723, 861
TaqI	TCGA	7 cut(s)	93, 128, 303, 402, 492, 910, 1625
TasI	AATT	6 cut(s)	106, 1008, 1227, 1431, 1596, 1738
TauI	GCSGC	4 cut(s)	30, 423, 515, 822
TfiI	GAWTC	6 cut(s)	282, 300, 406, 566, 582, 901
Tru1I	TTAA	2 cut(s)	1091, 1741
Tru9I	TTAA	2 cut(s)	1091, 1741
TscAI	CASTG	3 cut(s)	301, 592, 1131
TseFI	GTSAC	3 cut(s)	976, 1369, 1483
TseI	GCWGC	3 cut(s)	473, 1079, 1241
Tsp45I	GTSAC	3 cut(s)	976, 1369, 1483
TspDTI	ATGAA	4 cut(s)	233, 727, 1303, 1698
TspGWI	ACGGA	2 cut(s)	32, 1391
TspRI	CASTG	3 cut(s)	301, 592, 1131
VpaK11BI	GGWCC	6 cut(s)	165, 241, 323, 531, 622, 936
XceI	RCATGY	1 cut(s)	1706
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1575
XhoI	CTCGAG	1 cut(s)	909
XmiI	GTMKAC	1 cut(s)	128
XspI	CTAG	2 cut(s)	971, 1104

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.