Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr10

Orthogroup ID

OG0002369

Physical Location & Seq

Genomic Coordinates Reverse (-)

23729538 .. 23733162

Gene Structure 3625 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom10g21000.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1656 bp

ATGAAGGCGCGGAGTCATAACGAGATGAAGAAAACGCTCAACTGGTGGGACCTCATCTGGTTCGGACTCGGCGCTGTCATCGGCGCCGGAATATTCGTGCTCACCGGACTGGAGGCGAAAAATCACGCGGGCCCCGCGGTCGTGCTGTCGTACGTCGTCTCGGGCGTCTCCGCCTTGCTCTCTGTTTTCTGCTACACCGAGTTCGCAGTCGAGATTCCTGTTGCAGGGGGCTCATTTGCGTACCTAAGGGTGGAGCTAGGGGACTTCGTGGCCTTCATTGCAGCAGGCAACATCCTCCTCGAGTATGTCATAGGCGGCGCAGCCGTTGCTCGTTCCTGGACCTCCTACTTCACCACCCTCTGCAACCGAAGCGACACCAATGATTTCCGCATCGTAGCCCACGATTTGCCAGAGGACTACAGGTTCCTCGACCCTATTGCCGTTGTTGTCATTATCGGCATCTGCTGCCTCGCAGTCCTCAGCACAAAGGGCTCTTCTCGTCTCAACTACATTGCCTCGATTGTCCATGTAATTGTCATTGTCTTCATCATCATTGCCGGCCTCACCAAAGCTGATACCAAAAACTACGTCGATTTCGCCCCTTTTGGCCCCCGCGGTGTGTTCCAAGCCTCAGCTGTACTGTTCTTTGCGTACGTTGGATTCGATGCTGTTTCAACCATGGCGGAGGAGACCAAGAATCCCGCAAGGGACATCCCAATTGGTCTTGTCGGTTCAATGGTGATTACCACAGTGGTCTATTGCTTGCTTGCAGTGACATTATGCCTTATGCAGCCGTATGGCAGCATTGACGAACAAGCTCCATTTTCGGTTGCATTTGAAGCTGTTGGGATGGGATGGGCTAAGTACGTTGTGGCAGCAGGCGCATTGAAAGGTATGACAAGCGTGCTGCTTGTCGGGGCAGTTGGACAGGCTCGGTACCTCACTCACATTGCCCGAACGCACATGGTGCCGCCATGGTTTGCGCAAGTTGATTCCAAAACCGGCACTCCTGTCAATGCCACGGTCACCATGCTTGCAGCCACCGCAGTCATTGCTTTCTTCACGAGCCTCGACGTTCTGGCCAACCTTCTCTCCATCTCCACTCTGTTCATCTTCAGCCTTGTCGCCATGGCTCTCCTTGTTCGCCGCTACTATGTCAGCGGCGTCACAACTCAGGCCAACAGGAACAAGTTCATTGCCTGCCTTTTCATCATAATTAGCTCTTCAATGGCCACCTCTATCTACTGGAGCAGAACAGATAAATGGACTGCCTACGTGGTAACCGCGCCGCTTTGGTTCTTGGGTACTTTAGGGATTTGGTTACTTGTCCCCCAAGCAAGGAATCCGAAGCTCTGGGGAGTGCCACTGGTGCCATGGTTGCCATCTCTTTCAATTGCCATCAACATTTTCCTGCTCGGGTCAATCGATCACGCCTCATTCATAAGGTTTGCAGTGTGGACTCTGATCATCTTGATTTACTACTTCATCTTCGGGTTGCACGCGTCTTATGACACGGCAAAGGACTCCGAAGCGAAGAGGCTGGAGGGCGGCACAGGCAATGAGTTGAGGAAGGTCGAAGCTTCAGGGGTTGCGACAAGGGACTCCGGGTTAGGCAGCGGAAATGGTAGCTATGCCTCTGTAACTCCTGCTAATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005623 GO:0005886 GO:0016020 GO:0044464 GO:0071944

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AA_permease_2 AA_permease_C

Protein Analysis

552

Amino Acids

59.48

Weight (kDa)

8.34

Isoelectric Point (pI)

26.07

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002369)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G21120 AT4G21120
fragaria_vesca	FvH4_3g09930 FvH4_3g09940
malus_domestica	MD05G1274600.v1.1 MD05G1274700.v1.1 MD05G1274900.v1.1 MD10G1254300.v1.1
prunus_persica	Prupe.4G089000_v2.0.a1 Prupe.4G089100_v2.0.a1
pyrus_communis	pycom05g25610 pycom05g25630 pycom10g21000
rosa_chinensis	RchiOBHm_Chr5g0015621 RchiOBHm_Chr5g0015661 RchiOBHm_Chr5g0015691 RchiOBHm_Chr5g0015791
rosa_laevigata	RLG00000032214 RLG00000032217 RLG00000032219
rosa_multiflora	Rmu_sc0000843.1_g000004 Rmu_sc0000843.1_g000008 Rmu_sc0003230.1_g000003 Rmu_sc0003230.1_g000005
rosa_roxburghii	Rroxscaffold_1G00060830
rosa_rugosa	Rorug01G0078300 Rorug05G0029000 Rorug05G0029100
rosa_samantha	Rh5AG122300 Rh5AG122400 Rh5AG122600 Rh5BG120900 Rh5BG121200 Rh5BG121700 Rh5CG131300 Rh5CG131900 Rh5CG132800 Rh5DG119900 Rh5DG120600
rosa_wichuraiana	Rw5G010550 Rw5G010560 Rw5G010570

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	984
Acc65I	GGTACC	1 cut(s)	936
AccB1I	GGYRCC	4 cut(s)	83, 936, 967, 1369
AccII	CGCG	6 cut(s)	10, 128, 137, 615, 1286, 1502
AcoI	YGGCCR	2 cut(s)	1080, 1230
AcuI	CTGAAG	2 cut(s)	1099, 1566
AcyI	GRCGYC	3 cut(s)	84, 165, 1164
AdeI	CACNNNGTG	1 cut(s)	967
AfaI	GTAC	7 cut(s)	152, 242, 639, 653, 866, 938, 1306
AfiI	CCNNNNNNNGG	3 cut(s)	224, 250, 1338
AflIII	ACRYGT	1 cut(s)	1500
AgsI	TTSAA	6 cut(s)	675, 735, 839, 889, 1227, 1392
AjnI	CCWGG	1 cut(s)	335
AloI	GAACNNNNNNTCC	2 cut(s)	407, 439
AluBI	AGCT	9 cut(s)	256, 572, 635, 818, 842, 1221, 1351, 1580, 1629
AluI	AGCT	9 cut(s)	256, 572, 635, 818, 842, 1221, 1351, 1580, 1629
Alw21I	GWGCWC	1 cut(s)	102
Alw26I	GTCTC	4 cut(s)	163, 172, 506, 683
Ama87I	CYCGRG	3 cut(s)	160, 299, 1415
AoxI	GGCC	7 cut(s)	130, 270, 559, 607, 1080, 1176, 1230
ApaI	GGGCCC	1 cut(s)	134
ApeKI	GCWGC	9 cut(s)	281, 320, 465, 790, 801, 875, 907, 1037, 1614
ArsI	GACNNNNNNTTYG	2 cut(s)	573, 605
Asp700I	GAANNNNTTC	1 cut(s)	1190
Asp718I	GGTACC	1 cut(s)	936
AspLEI	GCGC	7 cut(s)	10, 74, 86, 320, 884, 985, 1288
AspS9I	GGNCC	5 cut(s)	49, 130, 131, 339, 608
AsuC2I	CCSGG	1 cut(s)	1606
AsuHPI	GGTGA	5 cut(s)	94, 343, 556, 751, 1018
AvaI	CYCGRG	3 cut(s)	160, 299, 1415
AvaII	GGWCC	2 cut(s)	49, 339
AxyI	CCTNAGG	1 cut(s)	245
BaeGI	GKGCMC	1 cut(s)	134
BalI	TGGCCA	2 cut(s)	1082, 1232
BanI	GGYRCC	4 cut(s)	83, 936, 967, 1369
BanII	GRGCYC	3 cut(s)	134, 233, 494
BauI	CACGAG	1 cut(s)	1063
BbsI	GAAGAC	1 cut(s)	535
Bbv12I	GWGCWC	1 cut(s)	102
BbvCI	CCTCAGC	2 cut(s)	479, 631
BbvI	GCAGC	9 cut(s)	293, 332, 452, 802, 813, 887, 894, 1049, 1626
BccI	CCATC	5 cut(s)	844, 849, 1103, 1390, 1406
BceAI	ACGGC	4 cut(s)	308, 425, 778, 1530
BcgI	CGANNNNNNTGC	2 cut(s)	419, 453
BciT130I	CCWGG	1 cut(s)	337
BclI	TGATCA	1 cut(s)	1464
BcnI	CCSGG	1 cut(s)	1606
BcoDI	GTCTC	4 cut(s)	163, 172, 506, 683
BfaI	CTAG	1 cut(s)	257
BfmI	CTRYAG	1 cut(s)	418
BfoI	RGCGCY	2 cut(s)	75, 87
Bme1390I	CCNGG	2 cut(s)	337, 1606
Bme18I	GGWCC	2 cut(s)	49, 339
BmeT110I	CYCGRG	3 cut(s)	160, 299, 1415
BmgT120I	GGNCC	5 cut(s)	49, 130, 131, 339, 608
BmiI	GGNNCC	9 cut(s)	50, 85, 132, 133, 425, 610, 938, 969, 1371
BmrFI	CCNGG	2 cut(s)	337, 1606
BmsI	GCATC	3 cut(s)	399, 468, 655
BpiI	GAAGAC	1 cut(s)	535
BpmI	CTGGAG	3 cut(s)	131, 1267, 1562
Bpu10I	CCTNAGC	2 cut(s)	479, 631
BpuMI	CCSGG	1 cut(s)	1606
Bsa29I	ATCGAT	1 cut(s)	1425
BsaAI	YACGTR	1 cut(s)	1276
BsaHI	GRCGYC	3 cut(s)	84, 165, 1164
BsaI	GGTCTC	1 cut(s)	683
BsaJI	CCNNGG	7 cut(s)	135, 613, 678, 974, 1020, 1128, 1373
BsaWI	WCCGGW	1 cut(s)	104
BsaXI	ACNNNNNCTCC	4 cut(s)	991, 1021, 1076, 1106
Bsc4I	CCNNNNNNNGG	3 cut(s)	224, 250, 1338
Bse118I	RCCGGY	2 cut(s)	557, 1001
Bse1I	ACTGG	4 cut(s)	47, 114, 1250, 1371
Bse21I	CCTNAGG	1 cut(s)	245
Bse3DI	GCAATG	7 cut(s)	276, 510, 552, 948, 1050, 1194, 1564
BseBI	CCWGG	1 cut(s)	337
BseCI	ATCGAT	1 cut(s)	1425
BseDI	CCNNGG	7 cut(s)	135, 613, 678, 974, 1020, 1128, 1373
BseGI	GGATG	4 cut(s)	291, 711, 855, 860
BseLI	CCNNNNNNNGG	3 cut(s)	224, 250, 1338
BseMI	GCAATG	7 cut(s)	276, 510, 552, 948, 1050, 1194, 1564
BseMII	CTCAG	3 cut(s)	493, 645, 1187
BseNI	ACTGG	4 cut(s)	47, 114, 1250, 1371
BseRI	GAGGAG	2 cut(s)	287, 701
BseSI	GKGCMC	1 cut(s)	134
BseXI	GCAGC	9 cut(s)	293, 332, 452, 802, 813, 887, 894, 1049, 1626
Bsh1236I	CGCG	6 cut(s)	10, 128, 137, 615, 1286, 1502
Bsh1285I	CGRYCG	1 cut(s)	141
BshFI	GGCC	7 cut(s)	132, 272, 561, 609, 1082, 1178, 1232
BshNI	GGYRCC	4 cut(s)	83, 936, 967, 1369
BshVI	ATCGAT	1 cut(s)	1425
BsiEI	CGRYCG	1 cut(s)	141
BsiHKAI	GWGCWC	1 cut(s)	102
BsiHKCI	CYCGRG	3 cut(s)	160, 299, 1415
BsiSI	CCGG	5 cut(s)	87, 105, 558, 1002, 1605
BsiWI	CGTACG	2 cut(s)	150, 651
BslFI	GGGAC	5 cut(s)	62, 275, 722, 1313, 1613
BslI	CCNNNNNNNGG	3 cut(s)	224, 250, 1338
BsmAI	GTCTC	4 cut(s)	163, 172, 506, 683
BsmBI	CGTCTC	3 cut(s)	163, 172, 506
BsmFI	GGGAC	5 cut(s)	62, 275, 722, 1313, 1613
BsnI	GGCC	7 cut(s)	132, 272, 561, 609, 1082, 1178, 1232
Bso31I	GGTCTC	1 cut(s)	683
BsoBI	CYCGRG	3 cut(s)	160, 299, 1415
Bsp120I	GGGCCC	1 cut(s)	130
Bsp1286I	GDGCHC	4 cut(s)	102, 134, 233, 494
Bsp143I	GATC	2 cut(s)	1426, 1464
Bsp19I	CCATGG	4 cut(s)	678, 974, 1128, 1373
BspANI	GGCC	7 cut(s)	132, 272, 561, 609, 1082, 1178, 1232
BspCNI	CTCAG	3 cut(s)	492, 644, 1186
BspDI	ATCGAT	1 cut(s)	1425
BspFNI	CGCG	6 cut(s)	10, 128, 137, 615, 1286, 1502
BspLI	GGNNCC	9 cut(s)	50, 85, 132, 133, 425, 610, 938, 969, 1371
BspQI	GCTCTTC	2 cut(s)	499, 1228
BspT107I	GGYRCC	4 cut(s)	83, 936, 967, 1369
BspTNI	GGTCTC	1 cut(s)	683
BsrDI	GCAATG	7 cut(s)	276, 510, 552, 948, 1050, 1194, 1564
BsrFI	RCCGGY	2 cut(s)	557, 1001
BsrI	ACTGG	4 cut(s)	47, 114, 1250, 1371
BssAI	RCCGGY	2 cut(s)	557, 1001
BssECI	CCNNGG	7 cut(s)	135, 613, 678, 974, 1020, 1128, 1373
BssMI	GATC	2 cut(s)	1426, 1464
BssNI	GRCGYC	3 cut(s)	84, 165, 1164
BssSI	CACGAG	1 cut(s)	1063
BssT1I	CCWWGG	4 cut(s)	678, 974, 1128, 1373
Bst2BI	CACGAG	1 cut(s)	1063
Bst2UI	CCWGG	1 cut(s)	337
Bst4CI	ACNGT	3 cut(s)	642, 751, 1024
Bst6I	CTCTTC	3 cut(s)	499, 1228, 1529
BstACI	GRCGYC	3 cut(s)	84, 165, 1164
BstAPI	GCANNNNNTGC	4 cut(s)	326, 465, 967, 1052
BstBAI	YACGTR	1 cut(s)	1276
BstDEI	CTNAG	5 cut(s)	245, 479, 631, 861, 1173
BstDSI	CCRYGG	7 cut(s)	135, 613, 678, 974, 1020, 1128, 1373
BstEII	GGTNACC	2 cut(s)	1024, 1279
BstENI	CCTNNNNNAGG	1 cut(s)	222
BstF5I	GGATG	4 cut(s)	291, 711, 855, 860
BstFNI	CGCG	6 cut(s)	10, 128, 137, 615, 1286, 1502
BstH2I	RGCGCY	2 cut(s)	75, 87
BstHHI	GCGC	7 cut(s)	10, 74, 86, 320, 884, 985, 1288
BstKTI	GATC	2 cut(s)	1429, 1467
BstMAI	GTCTC	4 cut(s)	163, 172, 506, 683
BstMBI	GATC	2 cut(s)	1426, 1464
BstMCI	CGRYCG	1 cut(s)	141
BstNI	CCWGG	1 cut(s)	337
BstPI	GGTNACC	2 cut(s)	1024, 1279
BstSCI	CCNGG	2 cut(s)	335, 1604
BstSFI	CTRYAG	1 cut(s)	418
BstSLI	GKGCMC	1 cut(s)	134
BstUI	CGCG	6 cut(s)	10, 128, 137, 615, 1286, 1502
BstV1I	GCAGC	9 cut(s)	293, 332, 452, 802, 813, 887, 894, 1049, 1626
BstV2I	GAAGAC	1 cut(s)	535
Bsu15I	ATCGAT	1 cut(s)	1425
Bsu36I	CCTNAGG	1 cut(s)	245
BsuRI	GGCC	7 cut(s)	132, 272, 561, 609, 1082, 1178, 1232
BsuTUI	ATCGAT	1 cut(s)	1425
BtgI	CCRYGG	7 cut(s)	135, 613, 678, 974, 1020, 1128, 1373
BtsCI	GGATG	4 cut(s)	291, 711, 855, 860
BtsI	GCAGTG	2 cut(s)	777, 1458
BtsIMutI	CAGTG	4 cut(s)	756, 777, 1364, 1458
CfoI	GCGC	7 cut(s)	10, 74, 86, 320, 884, 985, 1288
Cfr10I	RCCGGY	2 cut(s)	557, 1001
Cfr13I	GGNCC	5 cut(s)	49, 130, 131, 339, 608
Cfr42I	CCGCGG	2 cut(s)	138, 616
ClaI	ATCGAT	1 cut(s)	1425
CseI	GACGC	3 cut(s)	154, 1153, 1491
Csp6I	GTAC	7 cut(s)	151, 241, 638, 652, 865, 937, 1305
CviAII	CATG	7 cut(s)	527, 679, 964, 975, 1030, 1129, 1374
CviQI	GTAC	7 cut(s)	151, 241, 638, 652, 865, 937, 1305
DdeI	CTNAG	5 cut(s)	245, 479, 631, 861, 1173
DinI	GGCGCC	1 cut(s)	85
DpnI	GATC	2 cut(s)	1428, 1466
DpnII	GATC	2 cut(s)	1426, 1464
DraIII	CACNNNGTG	1 cut(s)	967
EaeI	YGGCCR	2 cut(s)	1080, 1230
Eam1104I	CTCTTC	3 cut(s)	499, 1228, 1529
EarI	CTCTTC	3 cut(s)	499, 1228, 1529
EciI	GGCGGA	2 cut(s)	160, 698
Eco130I	CCWWGG	4 cut(s)	678, 974, 1128, 1373
Eco24I	GRGCYC	3 cut(s)	134, 233, 494
Eco31I	GGTCTC	1 cut(s)	683
Eco47I	GGWCC	2 cut(s)	49, 339
Eco57I	CTGAAG	2 cut(s)	1099, 1566
Eco81I	CCTNAGG	1 cut(s)	245
Eco88I	CYCGRG	3 cut(s)	160, 299, 1415
Eco91I	GGTNACC	2 cut(s)	1024, 1279
EcoNI	CCTNNNNNAGG	1 cut(s)	222
EcoO109I	RGGNCCY	2 cut(s)	49, 131
EcoO65I	GGTNACC	2 cut(s)	1024, 1279
EcoRII	CCWGG	1 cut(s)	335
EcoT14I	CCWWGG	4 cut(s)	678, 974, 1128, 1373
EcoT38I	GRGCYC	3 cut(s)	134, 233, 494
EgeI	GGCGCC	1 cut(s)	85
EheI	GGCGCC	1 cut(s)	85
ErhI	CCWWGG	4 cut(s)	678, 974, 1128, 1373
Esp3I	CGTCTC	3 cut(s)	163, 172, 506
FaeI	CATG	7 cut(s)	530, 682, 967, 978, 1033, 1132, 1377
FaqI	GGGAC	5 cut(s)	62, 275, 722, 1313, 1613
FatI	CATG	7 cut(s)	526, 678, 963, 974, 1029, 1128, 1373
FauI	CCCGC	4 cut(s)	121, 142, 620, 709
FbaI	TGATCA	1 cut(s)	1464
FokI	GGATG	4 cut(s)	278, 698, 862, 867
FriOI	GRGCYC	3 cut(s)	134, 233, 494
FspBI	CTAG	1 cut(s)	257
FspI	TGCGCA	1 cut(s)	984
GlaI	GCGC	7 cut(s)	9, 73, 85, 319, 883, 984, 1287
GsuI	CTGGAG	3 cut(s)	131, 1267, 1562
HaeII	RGCGCY	2 cut(s)	75, 87
HaeIII	GGCC	7 cut(s)	132, 272, 561, 609, 1082, 1178, 1232
HapII	CCGG	5 cut(s)	87, 105, 558, 1002, 1605
HgaI	GACGC	3 cut(s)	154, 1153, 1491
HhaI	GCGC	7 cut(s)	10, 74, 86, 320, 884, 985, 1288
Hin1I	GRCGYC	3 cut(s)	84, 165, 1164
Hin1II	CATG	7 cut(s)	530, 682, 967, 978, 1033, 1132, 1377
Hin6I	GCGC	7 cut(s)	8, 72, 84, 318, 882, 983, 1286
HinP1I	GCGC	7 cut(s)	8, 72, 84, 318, 882, 983, 1286
HindIII	AAGCTT	1 cut(s)	1578
HpaII	CCGG	5 cut(s)	87, 105, 558, 1002, 1605
HphI	GGTGA	5 cut(s)	94, 343, 556, 751, 1018
Hpy166II	GTNNAC	1 cut(s)	1458
Hpy188I	TCNGA	4 cut(s)	65, 1347, 1464, 1528
Hpy188III	TCNNGA	3 cut(s)	211, 1063, 1471
Hpy8I	GTNNAC	1 cut(s)	1458
Hpy99I	CGWCG	3 cut(s)	158, 593, 1076
HpyAV	CCTTC	3 cut(s)	283, 1097, 1564
HpyCH4III	ACNGT	3 cut(s)	642, 751, 1024
HpyCH4IV	ACGT	6 cut(s)	153, 588, 654, 867, 1074, 1275
HpyCH4V	TGCA	9 cut(s)	224, 281, 363, 770, 790, 833, 1037, 1451, 1498
HpyF3I	CTNAG	5 cut(s)	245, 479, 631, 861, 1173
HpySE526I	ACGT	6 cut(s)	153, 588, 654, 867, 1074, 1275
Hsp92I	GRCGYC	3 cut(s)	84, 165, 1164
Hsp92II	CATG	7 cut(s)	530, 682, 967, 978, 1033, 1132, 1377
HspAI	GCGC	7 cut(s)	8, 72, 84, 318, 882, 983, 1286
KasI	GGCGCC	1 cut(s)	83
KpnI	GGTACC	1 cut(s)	940
KroI	GCCGGC	1 cut(s)	557
KroNI	GCCGGC	1 cut(s)	559
Ksp22I	TGATCA	1 cut(s)	1464
KspI	CCGCGG	2 cut(s)	138, 616
Kzo9I	GATC	2 cut(s)	1426, 1464
LguI	GCTCTTC	2 cut(s)	499, 1228
LmnI	GCTCC	3 cut(s)	253, 823, 1248
Lsp1109I	GCAGC	9 cut(s)	293, 332, 452, 802, 813, 887, 894, 1049, 1626
LweI	GCATC	3 cut(s)	399, 468, 655
MaeI	CTAG	1 cut(s)	257
MaeII	ACGT	6 cut(s)	153, 588, 654, 867, 1074, 1275
MaeIII	GTNAC	6 cut(s)	772, 1024, 1165, 1279, 1320, 1639
MalI	GATC	2 cut(s)	1428, 1466
MboI	GATC	2 cut(s)	1426, 1464
MboII	GAAGA	8 cut(s)	40, 486, 535, 1051, 1105, 1215, 1480, 1546
MfeI	CAATTG	2 cut(s)	717, 1392
MhlI	GDGCHC	4 cut(s)	102, 134, 233, 494
MlsI	TGGCCA	2 cut(s)	1082, 1232
MluCI	AATT	5 cut(s)	531, 717, 1215, 1392, 1651
MluI	ACGCGT	1 cut(s)	1500
MluNI	TGGCCA	2 cut(s)	1082, 1232
Mly113I	GGCGCC	1 cut(s)	84
MlyI	GAGTC	5 cut(s)	22, 60, 1453, 1517, 1595
MmeI	TCCRAC	2 cut(s)	637, 904
Mox20I	TGGCCA	2 cut(s)	1082, 1232
MroNI	GCCGGC	1 cut(s)	557
MroXI	GAANNNNTTC	1 cut(s)	1190
MscI	TGGCCA	2 cut(s)	1082, 1232
MseI	TTAA	1 cut(s)	1654
Msp20I	TGGCCA	2 cut(s)	1082, 1232
MspA1I	CMGCKG	5 cut(s)	137, 615, 635, 1161, 1617
MspI	CCGG	5 cut(s)	87, 105, 558, 1002, 1605
MspR9I	CCNGG	2 cut(s)	337, 1606
MunI	CAATTG	2 cut(s)	717, 1392
MvaI	CCWGG	1 cut(s)	337
MvnI	CGCG	6 cut(s)	10, 128, 137, 615, 1286, 1502
NaeI	GCCGGC	1 cut(s)	559
NarI	GGCGCC	1 cut(s)	84
NciI	CCSGG	1 cut(s)	1606
NcoI	CCATGG	4 cut(s)	678, 974, 1128, 1373
NdeII	GATC	2 cut(s)	1426, 1464
NgoMIV	GCCGGC	1 cut(s)	557
NlaIII	CATG	7 cut(s)	530, 682, 967, 978, 1033, 1132, 1377
NlaIV	GGNNCC	9 cut(s)	50, 85, 132, 133, 425, 610, 938, 969, 1371
NmeAIII	GCCGAG	1 cut(s)	48
NmuCI	GTSAC	3 cut(s)	772, 1024, 1165
NsbI	TGCGCA	1 cut(s)	984
PaeR7I	CTCGAG	1 cut(s)	299
PciSI	GCTCTTC	2 cut(s)	499, 1228
PcsI	WCGNNNNNNNCGW	4 cut(s)	162, 399, 660, 1422
PdiI	GCCGGC	1 cut(s)	559
PdmI	GAANNNNTTC	1 cut(s)	1190
PfeI	GAWTC	5 cut(s)	214, 660, 697, 992, 1342
Pfl23II	CGTACG	2 cut(s)	150, 651
PfoI	TCCNGGA	1 cut(s)	335
PleI	GAGTC	5 cut(s)	21, 60, 1453, 1517, 1595
PluTI	GGCGCC	1 cut(s)	87
PpsI	GAGTC	5 cut(s)	21, 60, 1453, 1517, 1595
Ppu21I	YACGTR	1 cut(s)	1276
PpuMI	RGGWCCY	1 cut(s)	49
Psp5II	RGGWCCY	1 cut(s)	49
Psp6I	CCWGG	1 cut(s)	335
PspEI	GGTNACC	2 cut(s)	1024, 1279
PspGI	CCWGG	1 cut(s)	335
PspLI	CGTACG	2 cut(s)	150, 651
PspN4I	GGNNCC	9 cut(s)	50, 85, 132, 133, 425, 610, 938, 969, 1371
PspOMI	GGGCCC	1 cut(s)	130
PspPI	GGNCC	5 cut(s)	49, 130, 131, 339, 608
PspPPI	RGGWCCY	1 cut(s)	49
PspXI	VCTCGAGB	1 cut(s)	299
PvuII	CAGCTG	1 cut(s)	635
RsaI	GTAC	7 cut(s)	152, 242, 639, 653, 866, 938, 1306
RsaNI	GTAC	7 cut(s)	151, 241, 638, 652, 865, 937, 1305
SacII	CCGCGG	2 cut(s)	138, 616
SapI	GCTCTTC	2 cut(s)	499, 1228
SaqAI	TTAA	1 cut(s)	1654
Sau3AI	GATC	2 cut(s)	1426, 1464
Sau96I	GGNCC	5 cut(s)	49, 130, 131, 339, 608
SchI	GAGTC	5 cut(s)	22, 60, 1453, 1517, 1595
ScrFI	CCNGG	2 cut(s)	337, 1606
SduI	GDGCHC	4 cut(s)	102, 134, 233, 494
SfaNI	GCATC	3 cut(s)	399, 468, 655
SfcI	CTRYAG	1 cut(s)	418
SfoI	GGCGCC	1 cut(s)	85
Sfr274I	CTCGAG	1 cut(s)	299
Sfr303I	CCGCGG	2 cut(s)	138, 616
SgrBI	CCGCGG	2 cut(s)	138, 616
SinI	GGWCC	2 cut(s)	49, 339
SlaI	CTCGAG	1 cut(s)	299
SmlI	CTYRAG	1 cut(s)	299
SmoI	CTYRAG	1 cut(s)	299
Sse9I	AATT	5 cut(s)	531, 717, 1215, 1392, 1651
SspDI	GGCGCC	1 cut(s)	83
SspI	AATATT	1 cut(s)	93
SspMI	CTAG	1 cut(s)	257
StyD4I	CCNGG	2 cut(s)	335, 1604
StyI	CCWWGG	4 cut(s)	678, 974, 1128, 1373
TaaI	ACNGT	3 cut(s)	642, 751, 1024
TaiI	ACGT	6 cut(s)	156, 591, 657, 870, 1077, 1278
TaqI	TCGA	9 cut(s)	210, 300, 429, 518, 591, 663, 1071, 1425, 1575
TasI	AATT	5 cut(s)	531, 717, 1215, 1392, 1651
TatI	WGTACW	1 cut(s)	637
TauI	GCSGC	6 cut(s)	318, 973, 1149, 1164, 1291, 1551
TfiI	GAWTC	5 cut(s)	214, 660, 697, 992, 1342
Tru1I	TTAA	1 cut(s)	1654
Tru9I	TTAA	1 cut(s)	1654
TscAI	CASTG	4 cut(s)	756, 777, 1371, 1458
TseFI	GTSAC	3 cut(s)	772, 1024, 1165
TseI	GCWGC	9 cut(s)	281, 320, 465, 790, 801, 875, 907, 1037, 1614
Tsp45I	GTSAC	3 cut(s)	772, 1024, 1165
TspDTI	ATGAA	9 cut(s)	17, 41, 265, 535, 1099, 1183, 1198, 1429, 1474
TspRI	CASTG	4 cut(s)	756, 777, 1371, 1458
VpaK11BI	GGWCC	2 cut(s)	49, 339
XagI	CCTNNNNNAGG	1 cut(s)	222
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1371
XhoI	CTCGAG	1 cut(s)	299
XmnI	GAANNNNTTC	1 cut(s)	1190
XspI	CTAG	1 cut(s)	257

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.