Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5B

Orthogroup ID

OG0002369

Physical Location & Seq

Genomic Coordinates Forward (+)

11450300 .. 11454299

Gene Structure 4000 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5BG120900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1842 bp

ATGGGGGCGAGCGGAACGGAACCGGGCGGCGGCGGCGGCGGCGGCGAGGGGCTGAAGAGGCGAGGGTGTTCGTGCGGAAAGAACGATTTTCTCCCGGAGGAGTCGTTCGAGAGCTGGGGCAATTACGCCAATGCGCTCCGGTCGACTCCTGCGAGGTTCAAGGACAGGTTCTTCACGCGGTCCTCCGACAGCACCGAGCTGGTGGAGGTGAAGGCGAGGAGCCAGCACGAGATGAAGAAGACGCTCAACTGGTGGGACCTCATCTGGTTCGGGCTCGGAGCCGTCATCGGCGCCGGAATCTTCGTCCTCACTGGACTCGAGGCCAGGAAACACGCCGGACCCGCCGTCGTCATGTCCTACGTCGTCTCCGGCGTCTCCGCCTTGCTCTCTGTTTTCTGTTACACAGAGTTCGCCGTCGAGATTCCCGTTGCAGGCGGCTCATTTGCCTACCTAAGAGTGGAGCTTGGGGACTTCGTGGCCTACATTGCAGCAGGCAACATCCTTCTCGAATATGTCATAGGCGGGGCGGCCGTTGCGCGTTCGTGGACCTCCTACTTCACCTCCCTATGCAACCAGGACGATTCCAATGCTTTCCGAATCACTGTCCACGGTTGGTCGGAGGACTACAAGTACCTGGACCCCATCGCCATTGGGGTTATCATCTTTATCTGCATACTCGCCGTCTTGAGCACAAAGGGCTCCTCGCGCCTCAACTACGTCGCCTCCATAGTCCACGTCATCGTCATTCTCTTCATCATCATAGCAGGTCTCACCAAAGCAGATACTAACAACTACAAGGATTTTGCCCCACATAGTGCTCGCGGCGTGTTCCAAGCCTCGGCAGTTCTCTTCTTCGCATACGTTGGATTTGACGCCGTTGCAACCATGGCCGAAGAGACCAAGAATCCTGCTCGTGACATCCCAATAGGGCTGGTTGGGTCTATGGTGATCACCACCACTCTTTATTGCTTGCTAGCCGTGACACTCTGCCTTATGGTACCATATCAGGAAATTGATGAGGACGCTCCATTTTCAAAAGCGTTTGAGACAGTTGGTATGGGTTGGGCCAAGTATGTGGTTGCAGCTGGAGCTCTAAAAGGCATGACTAGTGTTTTGCTCGTCGGGGCAGTGGGTCAGGCCCGGTATTTGACCCACATTGCCCGAACCCACATGATGCCCCCATGGTTTGCTCAAGTTGATGCCAAGACAGGTACTCCAGTCAATGCCACAATTGTCATGCTCGCAGCCACAGCTGTAATCGCTTTCTTCACCAGCCTCGACATTCTTGCTAACCTTCTCTCCATTTCTACGCTATTCATCTTCAGCCTCGTTGCCATTGCTCTACTCGTACGCCGTTACTATGTAACCGGCGTGACCACGGATGCAAACAGGAATAAGCTCATACTGTGCATTGTTATGATACTCGCGGGTGCAATTGCCACTTCTGCTTACTGGGGTGTCAGCCATGATTGGGTAGGGTATTGTGTGACGGCTCCTATTTGGTTCTTGGGGACTTTGGGGATTTGGTTTCTTGTTCCGCAAGCAAGGAGTCCAAAGCTTTGGGGGGTGCCATTGGTTCCATGGTTGCCTTCACTTTCGATTGGCATCAACATTTTCTTGCTTGGTTCGATTGATGGTGCTTCTTTTGTCAGGTTTGCAGTATGGACTGTGATTATCTTGGTTTACTATATTTTCTTTGGGTTGCATGCTTCATATGACACAGCGAAAGACTCTGAAGCTAAGAGGCTCGAGGGTGGGAAATACGAGACGAAGGTTGAAGGAACTAAGGACTCTGGTTTGGATGGTACGTATAGCAAGGCCTCTACAGAACCTGCTAGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005623 GO:0005886 GO:0016020 GO:0044464 GO:0071944

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AA_permease_2 AA_permease_C

Protein Analysis

613

Amino Acids

66.18

Weight (kDa)

6.52

Isoelectric Point (pI)

32.86

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AA_permease_2	PF13520	82 - 458	1.1e-52	Amino acid permease
AA_permease	PF00324	87 - 479	4.1e-36	Amino acid permease
AA_permease_C	PF13906	521 - 571	1.5e-17	C-terminus of AA_permease

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002369)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G21120 AT4G21120
fragaria_vesca	FvH4_3g09930 FvH4_3g09940
malus_domestica	MD05G1274600.v1.1 MD05G1274700.v1.1 MD05G1274900.v1.1 MD10G1254300.v1.1
prunus_persica	Prupe.4G089000_v2.0.a1 Prupe.4G089100_v2.0.a1
pyrus_communis	pycom05g25610 pycom05g25630 pycom10g21000
rosa_chinensis	RchiOBHm_Chr5g0015621 RchiOBHm_Chr5g0015661 RchiOBHm_Chr5g0015691 RchiOBHm_Chr5g0015791
rosa_laevigata	RLG00000032214 RLG00000032217 RLG00000032219
rosa_multiflora	Rmu_sc0000843.1_g000004 Rmu_sc0000843.1_g000008 Rmu_sc0003230.1_g000003 Rmu_sc0003230.1_g000005
rosa_roxburghii	Rroxscaffold_1G00060830
rosa_rugosa	Rorug01G0078300 Rorug05G0029000 Rorug05G0029100
rosa_samantha	Rh5AG122300 Rh5AG122400 Rh5AG122600 Rh5BG120900 Rh5BG121200 Rh5BG121700 Rh5CG131300 Rh5CG131900 Rh5CG132800 Rh5DG119900 Rh5DG120600
rosa_wichuraiana	Rw5G010550 Rw5G010560 Rw5G010570

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	755
Acc65I	GGTACC	1 cut(s)	997
AccB1I	GGYRCC	3 cut(s)	290, 997, 1567
AccBSI	CCGCTC	1 cut(s)	12
AccI	GTMKAC	1 cut(s)	143
AccII	CGCG	5 cut(s)	178, 538, 706, 822, 1427
AcoI	YGGCCR	2 cut(s)	528, 888
AcuI	CTGAAG	3 cut(s)	74, 1306, 1755
AcyI	GRCGYC	3 cut(s)	291, 372, 873
AdeI	CACNNNGTG	1 cut(s)	815
AfaI	GTAC	5 cut(s)	632, 999, 1213, 1350, 1807
AfiI	CCNNNNNNNGG	5 cut(s)	29, 431, 457, 838, 1471
AgsI	TTSAA	3 cut(s)	160, 1035, 1778
AhdI	GACNNNNNGTC	1 cut(s)	344
AhlI	ACTAGT	1 cut(s)	1106
AjiI	CACGTC	1 cut(s)	736
AjnI	CCWGG	3 cut(s)	323, 573, 633
AloI	GAACNNNNNNTCC	2 cut(s)	89, 121
AluBI	AGCT	9 cut(s)	114, 199, 463, 1085, 1091, 1253, 1399, 1558, 1739
AluI	AGCT	9 cut(s)	114, 199, 463, 1085, 1091, 1253, 1399, 1558, 1739
Alw21I	GWGCWC	3 cut(s)	692, 820, 1093
Alw26I	GTCTC	6 cut(s)	370, 379, 773, 890, 1040, 1760
AlwNI	CAGNNNCTG	1 cut(s)	1832
Ama87I	CYCGRG	2 cut(s)	317, 1748
AoxI	GGCC	7 cut(s)	321, 477, 528, 888, 1065, 1137, 1818
ApeKI	GCWGC	3 cut(s)	488, 1082, 1244
ArsI	GACNNNNNNTTYG	2 cut(s)	1096, 1128
Asp718I	GGTACC	1 cut(s)	997
AspLEI	GCGC	4 cut(s)	136, 293, 538, 708
AspS9I	GGNCC	7 cut(s)	180, 256, 338, 546, 637, 1065, 1138
AsuC2I	CCSGG	3 cut(s)	24, 95, 1141
AsuHPI	GGTGA	6 cut(s)	220, 550, 763, 943, 958, 1261
AsuNHI	GCTAGC	1 cut(s)	973
AvaI	CYCGRG	2 cut(s)	317, 1748
AvaII	GGWCC	5 cut(s)	180, 256, 338, 546, 637
BaeI	ACNNNNGTAYC	2 cut(s)	1203, 1236
BanI	GGYRCC	3 cut(s)	290, 997, 1567
BanII	GRGCYC	3 cut(s)	276, 701, 1093
BauI	CACGAG	2 cut(s)	227, 912
BbsI	GAAGAC	1 cut(s)	245
Bbv12I	GWGCWC	3 cut(s)	692, 820, 1093
BbvI	GCAGC	3 cut(s)	500, 1094, 1256
BccI	CCATC	3 cut(s)	650, 1628, 1796
BceAI	ACGGC	9 cut(s)	266, 329, 398, 515, 665, 860, 962, 1338, 1506
BcgI	CGANNNNNNTGC	4 cut(s)	569, 603, 1268, 1302
BciT130I	CCWGG	3 cut(s)	325, 575, 635
BclI	TGATCA	1 cut(s)	948
BcnI	CCSGG	3 cut(s)	24, 95, 1141
BcoDI	GTCTC	6 cut(s)	370, 379, 773, 890, 1040, 1760
BcuI	ACTAGT	1 cut(s)	1106
BfaI	CTAG	3 cut(s)	974, 1107, 1836
BfmI	CTRYAG	1 cut(s)	1824
BfoI	RGCGCY	1 cut(s)	294
BfuAI	ACCTGC	1 cut(s)	755
Bme1390I	CCNGG	6 cut(s)	24, 95, 325, 575, 635, 1141
Bme18I	GGWCC	5 cut(s)	180, 256, 338, 546, 637
BmeRI	GACNNNNNGTC	1 cut(s)	344
BmeT110I	CYCGRG	2 cut(s)	317, 1748
BmgBI	CACGTC	1 cut(s)	736
BmgT120I	GGNCC	7 cut(s)	180, 256, 338, 546, 637, 1065, 1138
BmrFI	CCNGG	6 cut(s)	24, 95, 325, 575, 635, 1141
BmrI	ACTGGG	1 cut(s)	1462
BmsI	GCATC	4 cut(s)	1164, 1189, 1372, 1614
BmtI	GCTAGC	1 cut(s)	977
BmuI	ACTGGG	1 cut(s)	1462
BpiI	GAAGAC	1 cut(s)	245
BpmI	CTGGAG	2 cut(s)	1107, 1200
BpuEI	CTTGAG	2 cut(s)	706, 1176
BpuMI	CCSGG	3 cut(s)	24, 95, 1141
BsaAI	YACGTR	1 cut(s)	1809
BsaBI	GATNNNNATC	1 cut(s)	1604
BsaHI	GRCGYC	3 cut(s)	291, 372, 873
BsaI	GGTCTC	2 cut(s)	773, 890
BsaJI	CCNNGG	6 cut(s)	607, 837, 885, 1181, 1377, 1580
BsaWI	WCCGGW	1 cut(s)	138
Bsc4I	CCNNNNNNNGG	5 cut(s)	29, 431, 457, 838, 1471
Bse118I	RCCGGY	1 cut(s)	1367
Bse1I	ACTGG	4 cut(s)	254, 316, 1217, 1457
Bse3DI	GCAATG	3 cut(s)	483, 1155, 1335
Bse8I	GATNNNNATC	1 cut(s)	1604
BseBI	CCWGG	3 cut(s)	325, 575, 635
BseDI	CCNNGG	6 cut(s)	607, 837, 885, 1181, 1377, 1580
BseGI	GGATG	4 cut(s)	498, 918, 1387, 1807
BseJI	GATNNNNATC	1 cut(s)	1604
BseLI	CCNNNNNNNGG	5 cut(s)	29, 431, 457, 838, 1471
BseMI	GCAATG	3 cut(s)	483, 1155, 1335
BseNI	ACTGG	4 cut(s)	254, 316, 1217, 1457
BseRI	GAGGAG	3 cut(s)	113, 232, 691
BseX3I	CGGCCG	1 cut(s)	528
BseXI	GCAGC	3 cut(s)	500, 1094, 1256
BseYI	CCCAGC	1 cut(s)	114
Bsh1236I	CGCG	5 cut(s)	178, 538, 706, 822, 1427
Bsh1285I	CGRYCG	2 cut(s)	143, 531
BshFI	GGCC	7 cut(s)	323, 479, 530, 890, 1067, 1139, 1820
BshNI	GGYRCC	3 cut(s)	290, 997, 1567
BsiEI	CGRYCG	2 cut(s)	143, 531
BsiHKAI	GWGCWC	3 cut(s)	692, 820, 1093
BsiHKCI	CYCGRG	2 cut(s)	317, 1748
BsiSI	CCGG	8 cut(s)	23, 95, 139, 294, 336, 369, 1141, 1368
BsiWI	CGTACG	1 cut(s)	1348
BslFI	GGGAC	3 cut(s)	269, 482, 1525
BslI	CCNNNNNNNGG	5 cut(s)	29, 431, 457, 838, 1471
BsmAI	GTCTC	6 cut(s)	370, 379, 773, 890, 1040, 1760
BsmBI	CGTCTC	3 cut(s)	370, 379, 1760
BsmFI	GGGAC	3 cut(s)	269, 482, 1525
BsnI	GGCC	7 cut(s)	323, 479, 530, 890, 1067, 1139, 1820
Bso31I	GGTCTC	2 cut(s)	773, 890
BsoBI	CYCGRG	2 cut(s)	317, 1748
Bsp1286I	GDGCHC	5 cut(s)	276, 692, 701, 820, 1093
Bsp143I	GATC	1 cut(s)	948
Bsp19I	CCATGG	3 cut(s)	885, 1181, 1580
BspANI	GGCC	7 cut(s)	323, 479, 530, 890, 1067, 1139, 1820
BspFNI	CGCG	5 cut(s)	178, 538, 706, 822, 1427
BspMI	ACCTGC	1 cut(s)	755
BspOI	GCTAGC	1 cut(s)	977
BspT107I	GGYRCC	3 cut(s)	290, 997, 1567
BspTNI	GGTCTC	2 cut(s)	773, 890
BsrBI	CCGCTC	1 cut(s)	12
BsrDI	GCAATG	3 cut(s)	483, 1155, 1335
BsrFI	RCCGGY	1 cut(s)	1367
BsrI	ACTGG	4 cut(s)	254, 316, 1217, 1457
BssAI	RCCGGY	1 cut(s)	1367
BssECI	CCNNGG	6 cut(s)	607, 837, 885, 1181, 1377, 1580
BssMI	GATC	1 cut(s)	948
BssNI	GRCGYC	3 cut(s)	291, 372, 873
BssSI	CACGAG	2 cut(s)	227, 912
BssT1I	CCWWGG	3 cut(s)	885, 1181, 1580
Bst2BI	CACGAG	2 cut(s)	227, 912
Bst2UI	CCWGG	3 cut(s)	325, 575, 635
Bst4CI	ACNGT	5 cut(s)	604, 611, 1051, 1407, 1669
Bst6I	CTCTTC	4 cut(s)	50, 755, 854, 888
BstACI	GRCGYC	3 cut(s)	291, 372, 873
BstBAI	YACGTR	1 cut(s)	1809
BstDEI	CTNAG	3 cut(s)	452, 1740, 1785
BstDSI	CCRYGG	5 cut(s)	607, 885, 1181, 1377, 1580
BstF5I	GGATG	4 cut(s)	498, 918, 1387, 1807
BstFNI	CGCG	5 cut(s)	178, 538, 706, 822, 1427
BstH2I	RGCGCY	1 cut(s)	294
BstHHI	GCGC	4 cut(s)	136, 293, 538, 708
BstKTI	GATC	1 cut(s)	951
BstMAI	GTCTC	6 cut(s)	370, 379, 773, 890, 1040, 1760
BstMBI	GATC	1 cut(s)	948
BstMCI	CGRYCG	2 cut(s)	143, 531
BstNI	CCWGG	3 cut(s)	325, 575, 635
BstNSI	RCATGY	1 cut(s)	1709
BstSCI	CCNGG	6 cut(s)	22, 93, 323, 573, 633, 1139
BstSFI	CTRYAG	1 cut(s)	1824
BstSNI	TACGTA	1 cut(s)	1809
BstUI	CGCG	5 cut(s)	178, 538, 706, 822, 1427
BstV1I	GCAGC	3 cut(s)	500, 1094, 1256
BstV2I	GAAGAC	1 cut(s)	245
BstXI	CCANNNNNNTGG	2 cut(s)	1075, 1560
BstZI	CGGCCG	1 cut(s)	528
BsuRI	GGCC	7 cut(s)	323, 479, 530, 890, 1067, 1139, 1820
BtgI	CCRYGG	5 cut(s)	607, 885, 1181, 1377, 1580
BtgZI	GCGATG	1 cut(s)	628
BtrI	CACGTC	1 cut(s)	736
BtsCI	GGATG	4 cut(s)	498, 918, 1387, 1807
BtsI	GCAGTG	1 cut(s)	1134
BtsIMutI	CAGTG	3 cut(s)	309, 600, 1134
BveI	ACCTGC	1 cut(s)	755
CaiI	CAGNNNCTG	1 cut(s)	1832
CfoI	GCGC	4 cut(s)	136, 293, 538, 708
Cfr10I	RCCGGY	1 cut(s)	1367
Cfr13I	GGNCC	7 cut(s)	180, 256, 338, 546, 637, 1065, 1138
CseI	GACGC	4 cut(s)	250, 361, 881, 1031
Csp6I	GTAC	5 cut(s)	631, 998, 1212, 1349, 1806
CviAII	CATG	9 cut(s)	352, 886, 1102, 1171, 1182, 1237, 1466, 1581, 1706
CviQI	GTAC	5 cut(s)	631, 998, 1212, 1349, 1806
DdeI	CTNAG	3 cut(s)	452, 1740, 1785
DinI	GGCGCC	1 cut(s)	292
DpnI	GATC	1 cut(s)	950
DpnII	GATC	1 cut(s)	948
DraIII	CACNNNGTG	1 cut(s)	815
DriI	GACNNNNNGTC	1 cut(s)	344
EaeI	YGGCCR	2 cut(s)	528, 888
EagI	CGGCCG	1 cut(s)	528
Eam1104I	CTCTTC	4 cut(s)	50, 755, 854, 888
Eam1105I	GACNNNNNGTC	1 cut(s)	344
EarI	CTCTTC	4 cut(s)	50, 755, 854, 888
EciI	GGCGGA	1 cut(s)	367
Ecl136II	GAGCTC	1 cut(s)	1091
EclXI	CGGCCG	1 cut(s)	528
Eco105I	TACGTA	1 cut(s)	1809
Eco130I	CCWWGG	3 cut(s)	885, 1181, 1580
Eco147I	AGGCCT	1 cut(s)	1820
Eco24I	GRGCYC	3 cut(s)	276, 701, 1093
Eco31I	GGTCTC	2 cut(s)	773, 890
Eco47I	GGWCC	5 cut(s)	180, 256, 338, 546, 637
Eco52I	CGGCCG	1 cut(s)	528
Eco53kI	GAGCTC	1 cut(s)	1091
Eco57I	CTGAAG	3 cut(s)	74, 1306, 1755
Eco88I	CYCGRG	2 cut(s)	317, 1748
EcoICRI	GAGCTC	1 cut(s)	1091
EcoO109I	RGGNCCY	1 cut(s)	256
EcoRII	CCWGG	3 cut(s)	323, 573, 633
EcoT14I	CCWWGG	3 cut(s)	885, 1181, 1580
EcoT38I	GRGCYC	3 cut(s)	276, 701, 1093
EgeI	GGCGCC	1 cut(s)	292
EheI	GGCGCC	1 cut(s)	292
ErhI	CCWWGG	3 cut(s)	885, 1181, 1580
Esp3I	CGTCTC	3 cut(s)	370, 379, 1760
FaeI	CATG	9 cut(s)	355, 889, 1105, 1174, 1185, 1240, 1469, 1584, 1709
FaqI	GGGAC	3 cut(s)	269, 482, 1525
FatI	CATG	9 cut(s)	351, 885, 1101, 1170, 1181, 1236, 1465, 1580, 1705
FauI	CCCGC	3 cut(s)	349, 515, 1420
FauNDI	CATATG	1 cut(s)	1714
FbaI	TGATCA	1 cut(s)	948
FblI	GTMKAC	1 cut(s)	143
FokI	GGATG	4 cut(s)	485, 905, 1394, 1814
FriOI	GRGCYC	3 cut(s)	276, 701, 1093
FspBI	CTAG	3 cut(s)	974, 1107, 1836
GlaI	GCGC	4 cut(s)	135, 292, 537, 707
GsaI	CCCAGC	1 cut(s)	118
GsuI	CTGGAG	2 cut(s)	1107, 1200
HaeII	RGCGCY	1 cut(s)	294
HaeIII	GGCC	7 cut(s)	323, 479, 530, 890, 1067, 1139, 1820
HapII	CCGG	8 cut(s)	23, 95, 139, 294, 336, 369, 1141, 1368
HgaI	GACGC	4 cut(s)	250, 361, 881, 1031
HhaI	GCGC	4 cut(s)	136, 293, 538, 708
Hin1I	GRCGYC	3 cut(s)	291, 372, 873
Hin1II	CATG	9 cut(s)	355, 889, 1105, 1174, 1185, 1240, 1469, 1584, 1709
Hin6I	GCGC	4 cut(s)	134, 291, 536, 706
HinP1I	GCGC	4 cut(s)	134, 291, 536, 706
HincII	GTYRAC	1 cut(s)	144
HindII	GTYRAC	1 cut(s)	144
HindIII	AAGCTT	1 cut(s)	1556
HpaII	CCGG	8 cut(s)	23, 95, 139, 294, 336, 369, 1141, 1368
HphI	GGTGA	6 cut(s)	220, 550, 763, 943, 958, 1261
Hpy166II	GTNNAC	5 cut(s)	144, 546, 607, 733, 1684
Hpy188I	TCNGA	5 cut(s)	187, 278, 596, 619, 1735
Hpy188III	TCNNGA	6 cut(s)	109, 418, 506, 685, 914, 1007
Hpy8I	GTNNAC	5 cut(s)	144, 546, 607, 733, 1684
Hpy99I	CGWCG	5 cut(s)	350, 365, 419, 722, 1124
HpyAV	CCTTC	6 cut(s)	205, 512, 1304, 1599, 1765, 1772
HpyCH4III	ACNGT	5 cut(s)	604, 611, 1051, 1407, 1669
HpyCH4IV	ACGT	5 cut(s)	360, 717, 735, 861, 1808
HpyF3I	CTNAG	3 cut(s)	452, 1740, 1785
HpySE526I	ACGT	5 cut(s)	360, 717, 735, 861, 1808
Hsp92I	GRCGYC	3 cut(s)	291, 372, 873
Hsp92II	CATG	9 cut(s)	355, 889, 1105, 1174, 1185, 1240, 1469, 1584, 1709
HspAI	GCGC	4 cut(s)	134, 291, 536, 706
KasI	GGCGCC	1 cut(s)	290
KpnI	GGTACC	1 cut(s)	1001
Ksp22I	TGATCA	1 cut(s)	948
Kzo9I	GATC	1 cut(s)	948
LmnI	GCTCC	8 cut(s)	141, 219, 278, 460, 704, 1030, 1088, 1498
Lsp1109I	GCAGC	3 cut(s)	500, 1094, 1256
LweI	GCATC	4 cut(s)	1164, 1189, 1372, 1614
MaeI	CTAG	3 cut(s)	974, 1107, 1836
MaeII	ACGT	5 cut(s)	360, 717, 735, 861, 1808
MaeIII	GTNAC	7 cut(s)	398, 914, 979, 1355, 1363, 1372, 1486
MalI	GATC	1 cut(s)	950
MbiI	CCGCTC	1 cut(s)	12
MboI	GATC	1 cut(s)	948
MfeI	CAATTG	2 cut(s)	1230, 1434
MhlI	GDGCHC	5 cut(s)	276, 692, 701, 820, 1093
MluCI	AATT	4 cut(s)	121, 1011, 1230, 1434
Mly113I	GGCGCC	1 cut(s)	291
MlyI	GAGTC	6 cut(s)	110, 139, 309, 1558, 1724, 1784
MmeI	TCCRAC	3 cut(s)	210, 597, 844
MseI	TTAA	1 cut(s)	1840
MslI	CAYNNNNRTG	1 cut(s)	1415
MspA1I	CMGCKG	2 cut(s)	1085, 1253
MspI	CCGG	8 cut(s)	23, 95, 139, 294, 336, 369, 1141, 1368
MspR9I	CCNGG	6 cut(s)	24, 95, 325, 575, 635, 1141
MunI	CAATTG	2 cut(s)	1230, 1434
MvaI	CCWGG	3 cut(s)	325, 575, 635
MvnI	CGCG	5 cut(s)	178, 538, 706, 822, 1427
NarI	GGCGCC	1 cut(s)	291
NciI	CCSGG	3 cut(s)	24, 95, 1141
NcoI	CCATGG	3 cut(s)	885, 1181, 1580
NdeI	CATATG	1 cut(s)	1714
NdeII	GATC	1 cut(s)	948
NheI	GCTAGC	1 cut(s)	973
NlaIII	CATG	9 cut(s)	355, 889, 1105, 1174, 1185, 1240, 1469, 1584, 1709
NmeAIII	GCCGAG	1 cut(s)	818
NmuCI	GTSAC	4 cut(s)	914, 979, 1372, 1486
NspI	RCATGY	1 cut(s)	1709
PaeI	GCATGC	1 cut(s)	1709
PaeR7I	CTCGAG	2 cut(s)	317, 1748
PceI	AGGCCT	1 cut(s)	1820
PcsI	WCGNNNNNNNCGW	3 cut(s)	149, 369, 423
PfeI	GAWTC	5 cut(s)	297, 421, 581, 597, 904
Pfl23II	CGTACG	1 cut(s)	1348
PfoI	TCCNGGA	1 cut(s)	93
PleI	GAGTC	6 cut(s)	109, 139, 309, 1557, 1724, 1784
PluTI	GGCGCC	1 cut(s)	294
PpsI	GAGTC	6 cut(s)	109, 139, 309, 1557, 1724, 1784
Ppu21I	YACGTR	1 cut(s)	1809
PpuMI	RGGWCCY	1 cut(s)	256
Psp124BI	GAGCTC	1 cut(s)	1093
Psp5II	RGGWCCY	1 cut(s)	256
Psp6I	CCWGG	3 cut(s)	323, 573, 633
PspFI	CCCAGC	1 cut(s)	114
PspGI	CCWGG	3 cut(s)	323, 573, 633
PspLI	CGTACG	1 cut(s)	1348
PspPI	GGNCC	7 cut(s)	180, 256, 338, 546, 637, 1065, 1138
PspPPI	RGGWCCY	1 cut(s)	256
PspXI	VCTCGAGB	2 cut(s)	317, 1748
PstNI	CAGNNNCTG	1 cut(s)	1832
PvuII	CAGCTG	2 cut(s)	1085, 1253
RsaI	GTAC	5 cut(s)	632, 999, 1213, 1350, 1807
RsaNI	GTAC	5 cut(s)	631, 998, 1212, 1349, 1806
RseI	CAYNNNNRTG	1 cut(s)	1415
SacI	GAGCTC	1 cut(s)	1093
SalI	GTCGAC	1 cut(s)	142
SaqAI	TTAA	1 cut(s)	1840
Sau3AI	GATC	1 cut(s)	948
Sau96I	GGNCC	7 cut(s)	180, 256, 338, 546, 637, 1065, 1138
SchI	GAGTC	6 cut(s)	110, 139, 309, 1558, 1724, 1784
ScrFI	CCNGG	6 cut(s)	24, 95, 325, 575, 635, 1141
SduI	GDGCHC	5 cut(s)	276, 692, 701, 820, 1093
SfaNI	GCATC	4 cut(s)	1164, 1189, 1372, 1614
SfcI	CTRYAG	1 cut(s)	1824
SfoI	GGCGCC	1 cut(s)	292
Sfr274I	CTCGAG	2 cut(s)	317, 1748
SinI	GGWCC	5 cut(s)	180, 256, 338, 546, 637
SlaI	CTCGAG	2 cut(s)	317, 1748
SmiMI	CAYNNNNRTG	1 cut(s)	1415
SmlI	CTYRAG	4 cut(s)	317, 685, 1191, 1748
SmoI	CTYRAG	4 cut(s)	317, 685, 1191, 1748
SnaBI	TACGTA	1 cut(s)	1809
SpeI	ACTAGT	1 cut(s)	1106
SphI	GCATGC	1 cut(s)	1709
Sse9I	AATT	4 cut(s)	121, 1011, 1230, 1434
SseBI	AGGCCT	1 cut(s)	1820
SspDI	GGCGCC	1 cut(s)	290
SspMI	CTAG	3 cut(s)	974, 1107, 1836
SstI	GAGCTC	1 cut(s)	1093
StuI	AGGCCT	1 cut(s)	1820
StyD4I	CCNGG	6 cut(s)	22, 93, 323, 573, 633, 1139
StyI	CCWWGG	3 cut(s)	885, 1181, 1580
TaaI	ACNGT	5 cut(s)	604, 611, 1051, 1407, 1669
TaiI	ACGT	5 cut(s)	363, 720, 738, 864, 1811
TaqI	TCGA	9 cut(s)	108, 143, 318, 417, 507, 1278, 1598, 1628, 1749
TasI	AATT	4 cut(s)	121, 1011, 1230, 1434
TauI	GCSGC	9 cut(s)	30, 33, 36, 39, 42, 45, 438, 530, 825
TfiI	GAWTC	5 cut(s)	297, 421, 581, 597, 904
Tru1I	TTAA	1 cut(s)	1840
Tru9I	TTAA	1 cut(s)	1840
TscAI	CASTG	3 cut(s)	316, 607, 1134
TseFI	GTSAC	4 cut(s)	914, 979, 1372, 1486
TseI	GCWGC	3 cut(s)	488, 1082, 1244
Tsp45I	GTSAC	4 cut(s)	914, 979, 1372, 1486
TspDTI	ATGAA	4 cut(s)	248, 742, 1306, 1701
TspGWI	ACGGA	2 cut(s)	32, 1394
TspRI	CASTG	3 cut(s)	316, 607, 1134
VpaK11BI	GGWCC	5 cut(s)	180, 256, 338, 546, 637
XceI	RCATGY	1 cut(s)	1709
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1578
XhoI	CTCGAG	2 cut(s)	317, 1748
XmiI	GTMKAC	1 cut(s)	143
XspI	CTAG	3 cut(s)	974, 1107, 1836

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.