FvH4_3g14181

Uncharacterized protein K02A2.6-like

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
Physical Location & Seq
Reverse (-)
8540356 .. 8540805
450 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g14181.t1

Sequence Viewer

Length: 342 bp
ATGGTGTGGCTAAAGGGTCTGTTGGAAGAATTGGGCAAAGTGCCAGAGAATTGTGCGTTGCACTGTGATAGTCAAAGTGCAATTCACCTGGCAAAGAACCCTGCGTTTCATTCAAGGACTAAACACATTCCTACGAGGTATCACTACATACGAGAGCTCGTGGAGAATGAAGTGCTGCAATTGTTGAAGATTCAAGGAAGTGAGAATCCTGCTGATATGTTTACTAAAGTATTGAAGAATGGTGACTACTGGCGTAATCGGCTCCAAGTGGAAGATTGTTGGGTTTGTGGATCCGATTCCACCAAGGATGAGGATTGTGTCATACTTGATCTTACATGGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

114

Amino Acids

13.1

Weight (kDa)

5.67

Isoelectric Point (pI)

44.57

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 2 cut(s) 285, 298
AgsI TTSAA 4 cut(s) 114, 187, 194, 235
AjnI CCWGG 1 cut(s) 87
AluBI AGCT 1 cut(s) 157
AluI AGCT 1 cut(s) 157
Alw21I GWGCWC 1 cut(s) 159
AlwI GGATC 2 cut(s) 285, 298
ApeKI GCWGC 1 cut(s) 175
AsuHPI GGTGA 2 cut(s) 77, 254
BamHI GGATCC 1 cut(s) 290
BanII GRGCYC 1 cut(s) 159
BauI CACGAG 1 cut(s) 158
Bbv12I GWGCWC 1 cut(s) 159
BbvI GCAGC 1 cut(s) 162
BciT130I CCWGG 1 cut(s) 89
BisI GCNGC 1 cut(s) 176
BlsI GCNGC 1 cut(s) 177
Bme1390I CCNGG 1 cut(s) 89
BmiI GGNNCC 2 cut(s) 263, 292
BmrFI CCNGG 1 cut(s) 89
BsaJI CCNNGG 1 cut(s) 303
Bse1I ACTGG 1 cut(s) 254
BseBI CCWGG 1 cut(s) 89
BseDI CCNNGG 1 cut(s) 303
BseGI GGATG 1 cut(s) 313
BseNI ACTGG 1 cut(s) 254
BseXI GCAGC 1 cut(s) 162
BsiHKAI GWGCWC 1 cut(s) 159
Bsp1286I GDGCHC 1 cut(s) 159
Bsp143I GATC 2 cut(s) 290, 328
BspLI GGNNCC 2 cut(s) 263, 292
BspPI GGATC 2 cut(s) 285, 298
BsrI ACTGG 1 cut(s) 254
BssECI CCNNGG 1 cut(s) 303
BssMI GATC 2 cut(s) 290, 328
BssSI CACGAG 1 cut(s) 158
BssT1I CCWWGG 1 cut(s) 303
Bst2BI CACGAG 1 cut(s) 158
Bst2UI CCWGG 1 cut(s) 89
Bst4CI ACNGT 1 cut(s) 65
BstF5I GGATG 1 cut(s) 313
BstKTI GATC 2 cut(s) 293, 331
BstMBI GATC 2 cut(s) 290, 328
BstMWI GCNNNNNNNGC 1 cut(s) 259
BstNI CCWGG 1 cut(s) 89
BstSCI CCNGG 1 cut(s) 87
BstV1I GCAGC 1 cut(s) 162
BstX2I RGATCY 1 cut(s) 290
BstYI RGATCY 1 cut(s) 290
BtsCI GGATG 1 cut(s) 313
BtsIMutI CAGTG 1 cut(s) 61
CviAII CATG 1 cut(s) 336
CviJI RGCY 3 cut(s) 10, 157, 262
CviKI_1 RGCY 3 cut(s) 10, 157, 262
DpnI GATC 2 cut(s) 292, 330
DpnII GATC 2 cut(s) 290, 328
Ecl136II GAGCTC 1 cut(s) 157
Eco130I CCWWGG 1 cut(s) 303
Eco24I GRGCYC 1 cut(s) 159
Eco53kI GAGCTC 1 cut(s) 157
EcoICRI GAGCTC 1 cut(s) 157
EcoRII CCWGG 1 cut(s) 87
EcoT14I CCWWGG 1 cut(s) 303
EcoT38I GRGCYC 1 cut(s) 159
ErhI CCWWGG 1 cut(s) 303
FaeI CATG 1 cut(s) 339
FaiI YATR 4 cut(s) 149, 218, 323, 337
FatI CATG 1 cut(s) 335
Fnu4HI GCNGC 1 cut(s) 176
FokI GGATG 1 cut(s) 320
FriOI GRGCYC 1 cut(s) 159
Fsp4HI GCNGC 1 cut(s) 176
GluI GCNGC 1 cut(s) 176
Hin1II CATG 1 cut(s) 339
HinfI GANTC 3 cut(s) 190, 205, 296
HphI GGTGA 2 cut(s) 77, 254
Hpy166II GTNNAC 1 cut(s) 222
Hpy188I TCNGA 1 cut(s) 295
Hpy8I GTNNAC 1 cut(s) 222
HpyCH4III ACNGT 1 cut(s) 65
HpyCH4V TGCA 3 cut(s) 61, 80, 178
HpyF10VI GCNNNNNNNGC 1 cut(s) 259
Hsp92II CATG 1 cut(s) 339
Kzo9I GATC 2 cut(s) 290, 328
LmnI GCTCC 1 cut(s) 267
LpnPI CCDG 6 cut(s) 57, 74, 101, 114, 222, 235
Lsp1109I GCAGC 1 cut(s) 162
MaeIII GTNAC 1 cut(s) 242
MalI GATC 2 cut(s) 292, 330
MboI GATC 2 cut(s) 290, 328
MboII GAAGA 4 cut(s) 38, 199, 247, 284
MfeI CAATTG 1 cut(s) 179
MflI RGATCY 1 cut(s) 290
MhlI GDGCHC 1 cut(s) 159
MluCI AATT 4 cut(s) 29, 49, 81, 179
MnlI CCTC 2 cut(s) 129, 304
MspR9I CCNGG 1 cut(s) 89
MunI CAATTG 1 cut(s) 179
MvaI CCWGG 1 cut(s) 89
MwoI GCNNNNNNNGC 1 cut(s) 259
NdeII GATC 2 cut(s) 290, 328
NlaIII CATG 1 cut(s) 339
NlaIV GGNNCC 2 cut(s) 263, 292
NmuCI GTSAC 1 cut(s) 242
PfeI GAWTC 3 cut(s) 190, 205, 296
PkrI GCNGC 1 cut(s) 177
Psp124BI GAGCTC 1 cut(s) 159
Psp6I CCWGG 1 cut(s) 87
PspGI CCWGG 1 cut(s) 87
PspN4I GGNNCC 2 cut(s) 263, 292
PsuI RGATCY 1 cut(s) 290
SacI GAGCTC 1 cut(s) 159
SatI GCNGC 1 cut(s) 176
Sau3AI GATC 2 cut(s) 290, 328
ScrFI CCNGG 1 cut(s) 89
SduI GDGCHC 1 cut(s) 159
SetI ASST 3 cut(s) 90, 140, 159
Sse9I AATT 4 cut(s) 29, 49, 81, 179
SstI GAGCTC 1 cut(s) 159
StyD4I CCNGG 1 cut(s) 87
StyI CCWWGG 1 cut(s) 303
TaaI ACNGT 1 cut(s) 65
TasI AATT 4 cut(s) 29, 49, 81, 179
TfiI GAWTC 3 cut(s) 190, 205, 296
TscAI CASTG 1 cut(s) 68
TseFI GTSAC 1 cut(s) 242
TseI GCWGC 1 cut(s) 175
Tsp45I GTSAC 1 cut(s) 242
TspDTI ATGAA 2 cut(s) 98, 183
TspRI CASTG 1 cut(s) 68
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.