transposition, RNA-mediated
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G11591 |
| fragaria_vesca | FvH4_2g20411 FvH4_2g29931 FvH4_3g14181 FvH4_4g00781 FvH4_4g12541 FvH4_5g22143 FvH4_7g24581 |
| pyrus_communis | pycom04g03170 pycom05g18080 pycom12g05030 pycom13g18540 |
| rosa_chinensis | RchiOBHm_Chr1g0313681 RchiOBHm_Chr1g0344501 RchiOBHm_Chr2g0157511 |
| rosa_laevigata | RLG00000008144 RLG00000008360 |
| rosa_multiflora | Rmu_sc0003765.1_g000035 Rmu_sc0004343.1_g000026 Rmu_sc0006087.1_g000011 |
| rosa_roxburghii | Rroxscaffold_1G00038680 Rroxscaffold_3G00247490 Rroxscaffold_4G00315330 Rroxscaffold_5G00355970 Rroxscaffold_7G00214090 |
| rosa_rugosa | Rorug04G0109300 Rorug04G0109400 |
| rosa_samantha | Rh1AG403200 Rh4AG167500 Rh4BG164600 Rh4CG179400 Rh4DG162300 |
| rosa_wichuraiana | Rw4G013620 Rw4G013850 Rw4G013950 Rw6G038170 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 678 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 2068 |
| AccBSI | CCGCTC | 1 cut(s) | 1736 |
| AccI | GTMKAC | 1 cut(s) | 1012 |
| AccII | CGCG | 3 cut(s) | 496, 1167, 2399 |
| AciI | CCGC | 9 cut(s) | 1167, 1431, 1736, 1750, 1883, 1959, 1997, 2066, 2397 |
| AclWI | GGATC | 4 cut(s) | 1258, 1338, 2325, 2338 |
| AcoI | YGGCCR | 2 cut(s) | 1872, 2286 |
| AcsI | RAATTY | 5 cut(s) | 247, 812, 1530, 1867, 2026 |
| AcuI | CTGAAG | 4 cut(s) | 777, 1001, 1509, 2141 |
| AfaI | GTAC | 5 cut(s) | 466, 738, 1185, 1342, 1572 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 1756, 1813, 2068, 2234, 2251, 2268, 2269 |
| AflIII | ACRYGT | 1 cut(s) | 494 |
| AgsI | TTSAA | 8 cut(s) | 247, 709, 812, 1091, 1136, 1536, 1582, 2213 |
| AjnI | CCWGG | 2 cut(s) | 739, 2061 |
| Alw21I | GWGCWC | 2 cut(s) | 1481, 2296 |
| Alw26I | GTCTC | 4 cut(s) | 139, 1156, 1797, 1904 |
| AlwI | GGATC | 4 cut(s) | 1258, 1338, 2325, 2338 |
| AoxI | GGCC | 3 cut(s) | 1872, 2286, 2408 |
| ApeKI | GCWGC | 9 cut(s) | 153, 512, 773, 1961, 1968, 1994, 2002, 2123, 2147 |
| ApoI | RAATTY | 5 cut(s) | 247, 812, 1530, 1867, 2026 |
| AspLEI | GCGC | 5 cut(s) | 679, 1310, 2059, 2123, 2152 |
| AspS9I | GGNCC | 1 cut(s) | 2382 |
| AsuC2I | CCSGG | 1 cut(s) | 2354 |
| AsuHPI | GGTGA | 4 cut(s) | 813, 1656, 2428, 2430 |
| AsuII | TTCGAA | 2 cut(s) | 859, 1708 |
| AsuNHI | GCTAGC | 1 cut(s) | 487 |
| AvaII | GGWCC | 1 cut(s) | 2382 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1167, 1200 |
| BamHI | GGATCC | 1 cut(s) | 2330 |
| Bbv12I | GWGCWC | 2 cut(s) | 1481, 2296 |
| BbvI | GCAGC | 9 cut(s) | 165, 499, 785, 1973, 1980, 1989, 2006, 2110, 2159 |
| BccI | CCATC | 8 cut(s) | 194, 198, 656, 1412, 1602, 1629, 1633, 1883 |
| BceAI | ACGGC | 1 cut(s) | 1737 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 145, 179 |
| BciT130I | CCWGG | 2 cut(s) | 741, 2063 |
| BciVI | GTATCC | 1 cut(s) | 835 |
| BclI | TGATCA | 2 cut(s) | 22, 783 |
| BcnI | CCSGG | 1 cut(s) | 2354 |
| BcoDI | GTCTC | 4 cut(s) | 139, 1156, 1797, 1904 |
| BfaI | CTAG | 7 cut(s) | 443, 488, 953, 1356, 1832, 1904, 1932 |
| BfmI | CTRYAG | 2 cut(s) | 771, 1407 |
| BfoI | RGCGCY | 2 cut(s) | 2060, 2124 |
| BfuI | GTATCC | 1 cut(s) | 835 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 1758 |
| BglII | AGATCT | 1 cut(s) | 2018 |
| BlpI | GCTNAGC | 1 cut(s) | 483 |
| BmcAI | AGTACT | 2 cut(s) | 466, 1342 |
| Bme1390I | CCNGG | 3 cut(s) | 741, 2063, 2354 |
| Bme18I | GGWCC | 1 cut(s) | 2382 |
| BmgT120I | GGNCC | 1 cut(s) | 2382 |
| BmiI | GGNNCC | 3 cut(s) | 1957, 2073, 2332 |
| BmrFI | CCNGG | 3 cut(s) | 741, 2063, 2354 |
| BmsI | GCATC | 4 cut(s) | 465, 1043, 1691, 2161 |
| BmtI | GCTAGC | 1 cut(s) | 491 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 483 |
| Bpu14I | TTCGAA | 2 cut(s) | 859, 1708 |
| BpuEI | CTTGAG | 1 cut(s) | 2267 |
| BpuMI | CCSGG | 1 cut(s) | 2354 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1509 |
| BsaI | GGTCTC | 2 cut(s) | 139, 1797 |
| BsaJI | CCNNGG | 6 cut(s) | 406, 803, 2061, 2092, 2334, 2405 |
| BsaWI | WCCGGW | 2 cut(s) | 2413, 2440 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 1685, 1715, 2268, 2298 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 1756, 1813, 2068, 2234, 2251, 2268, 2269 |
| Bse118I | RCCGGY | 1 cut(s) | 1427 |
| Bse1I | ACTGG | 3 cut(s) | 988, 1187, 2384 |
| Bse3DI | GCAATG | 5 cut(s) | 641, 1790, 1846, 1878, 2104 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1509 |
| BseBI | CCWGG | 2 cut(s) | 741, 2063 |
| BseDI | CCNNGG | 6 cut(s) | 406, 803, 2061, 2092, 2334, 2405 |
| BseGI | GGATG | 7 cut(s) | 186, 237, 453, 480, 1423, 1640, 1644 |
| BseJI | GATNNNNATC | 1 cut(s) | 1509 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 1756, 1813, 2068, 2234, 2251, 2268, 2269 |
| BseMI | GCAATG | 5 cut(s) | 641, 1790, 1846, 1878, 2104 |
| BseMII | CTCAG | 1 cut(s) | 2126 |
| BseNI | ACTGG | 3 cut(s) | 988, 1187, 2384 |
| BseXI | GCAGC | 9 cut(s) | 165, 499, 785, 1973, 1980, 1989, 2006, 2110, 2159 |
| BseYI | CCCAGC | 1 cut(s) | 1656 |
| Bsh1236I | CGCG | 3 cut(s) | 496, 1167, 2399 |
| BshFI | GGCC | 3 cut(s) | 1874, 2288, 2410 |
| BsiHKAI | GWGCWC | 2 cut(s) | 1481, 2296 |
| BsiSI | CCGG | 5 cut(s) | 1428, 2289, 2354, 2414, 2441 |
| BslFI | GGGAC | 2 cut(s) | 142, 1706 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 1756, 1813, 2068, 2234, 2251, 2268, 2269 |
| BsmAI | GTCTC | 4 cut(s) | 139, 1156, 1797, 1904 |
| BsmBI | CGTCTC | 1 cut(s) | 1156 |
| BsmFI | GGGAC | 2 cut(s) | 142, 1706 |
| BsnI | GGCC | 3 cut(s) | 1874, 2288, 2410 |
| Bso31I | GGTCTC | 2 cut(s) | 139, 1797 |
| Bsp119I | TTCGAA | 2 cut(s) | 859, 1708 |
| Bsp1286I | GDGCHC | 2 cut(s) | 1481, 2296 |
| Bsp143I | GATC | 8 cut(s) | 22, 714, 783, 1263, 1330, 2018, 2330, 2371 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 483 |
| Bsp19I | CCATGG | 1 cut(s) | 406 |
| BspACI | CCGC | 9 cut(s) | 1167, 1431, 1736, 1750, 1883, 1959, 1997, 2066, 2397 |
| BspANI | GGCC | 3 cut(s) | 1874, 2288, 2410 |
| BspCNI | CTCAG | 1 cut(s) | 2127 |
| BspFNI | CGCG | 3 cut(s) | 496, 1167, 2399 |
| BspHI | TCATGA | 1 cut(s) | 1257 |
| BspLI | GGNNCC | 3 cut(s) | 1957, 2073, 2332 |
| BspMAI | CTGCAG | 1 cut(s) | 775 |
| BspOI | GCTAGC | 1 cut(s) | 491 |
| BspPI | GGATC | 4 cut(s) | 1258, 1338, 2325, 2338 |
| BspT104I | TTCGAA | 2 cut(s) | 859, 1708 |
| BspTNI | GGTCTC | 2 cut(s) | 139, 1797 |
| BsrBI | CCGCTC | 1 cut(s) | 1736 |
| BsrDI | GCAATG | 5 cut(s) | 641, 1790, 1846, 1878, 2104 |
| BsrFI | RCCGGY | 1 cut(s) | 1427 |
| BsrI | ACTGG | 3 cut(s) | 988, 1187, 2384 |
| BssAI | RCCGGY | 1 cut(s) | 1427 |
| BssECI | CCNNGG | 6 cut(s) | 406, 803, 2061, 2092, 2334, 2405 |
| BssMI | GATC | 8 cut(s) | 22, 714, 783, 1263, 1330, 2018, 2330, 2371 |
| BssT1I | CCWWGG | 4 cut(s) | 406, 803, 2092, 2405 |
| Bst2UI | CCWGG | 2 cut(s) | 741, 2063 |
| Bst4CI | ACNGT | 5 cut(s) | 182, 837, 1045, 1485, 2076 |
| Bst6I | CTCTTC | 2 cut(s) | 125, 2165 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1391 |
| BstBI | TTCGAA | 2 cut(s) | 859, 1708 |
| BstDEI | CTNAG | 2 cut(s) | 483, 2135 |
| BstDSI | CCRYGG | 1 cut(s) | 406 |
| BstEII | GGTNACC | 1 cut(s) | 2416 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 2249 |
| BstF5I | GGATG | 7 cut(s) | 186, 237, 453, 480, 1423, 1640, 1644 |
| BstFNI | CGCG | 3 cut(s) | 496, 1167, 2399 |
| BstH2I | RGCGCY | 2 cut(s) | 2060, 2124 |
| BstHHI | GCGC | 5 cut(s) | 679, 1310, 2059, 2123, 2152 |
| BstKTI | GATC | 8 cut(s) | 25, 717, 786, 1266, 1333, 2021, 2333, 2374 |
| BstMAI | GTCTC | 4 cut(s) | 139, 1156, 1797, 1904 |
| BstMBI | GATC | 8 cut(s) | 22, 714, 783, 1263, 1330, 2018, 2330, 2371 |
| BstNI | CCWGG | 2 cut(s) | 741, 2063 |
| BstNSI | RCATGY | 5 cut(s) | 482, 1394, 1497, 1831, 2396 |
| BstPI | GGTNACC | 1 cut(s) | 2416 |
| BstSCI | CCNGG | 3 cut(s) | 739, 2061, 2352 |
| BstSFI | CTRYAG | 2 cut(s) | 771, 1407 |
| BstUI | CGCG | 3 cut(s) | 496, 1167, 2399 |
| BstV1I | GCAGC | 9 cut(s) | 165, 499, 785, 1973, 1980, 1989, 2006, 2110, 2159 |
| BstX2I | RGATCY | 2 cut(s) | 2018, 2330 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1194 |
| BstYI | RGATCY | 2 cut(s) | 2018, 2330 |
| BsuI | GTATCC | 1 cut(s) | 835 |
| BsuRI | GGCC | 3 cut(s) | 1874, 2288, 2410 |
| BtgI | CCRYGG | 1 cut(s) | 406 |
| BtsCI | GGATG | 7 cut(s) | 186, 237, 453, 480, 1423, 1640, 1644 |
| BtsI | GCAGTG | 1 cut(s) | 1385 |
| BtsIMutI | CAGTG | 3 cut(s) | 1385, 1481, 2377 |
| CciI | TCATGA | 1 cut(s) | 1257 |
| CfoI | GCGC | 5 cut(s) | 679, 1310, 2059, 2123, 2152 |
| Cfr10I | RCCGGY | 1 cut(s) | 1427 |
| Cfr13I | GGNCC | 1 cut(s) | 2382 |
| CseI | GACGC | 1 cut(s) | 1173 |
| Csp6I | GTAC | 5 cut(s) | 465, 737, 1184, 1341, 1571 |
| CviQI | GTAC | 5 cut(s) | 465, 737, 1184, 1341, 1571 |
| DdeI | CTNAG | 2 cut(s) | 483, 2135 |
| DpnI | GATC | 8 cut(s) | 24, 716, 785, 1265, 1332, 2020, 2332, 2373 |
| DpnII | GATC | 8 cut(s) | 22, 714, 783, 1263, 1330, 2018, 2330, 2371 |
| EaeI | YGGCCR | 2 cut(s) | 1872, 2286 |
| Eam1104I | CTCTTC | 2 cut(s) | 125, 2165 |
| EarI | CTCTTC | 2 cut(s) | 125, 2165 |
| EciI | GGCGGA | 1 cut(s) | 1739 |
| Eco130I | CCWWGG | 4 cut(s) | 406, 803, 2092, 2405 |
| Eco31I | GGTCTC | 2 cut(s) | 139, 1797 |
| Eco47I | GGWCC | 1 cut(s) | 2382 |
| Eco57I | CTGAAG | 4 cut(s) | 777, 1001, 1509, 2141 |
| Eco91I | GGTNACC | 1 cut(s) | 2416 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 2249 |
| EcoO65I | GGTNACC | 1 cut(s) | 2416 |
| EcoRII | CCWGG | 2 cut(s) | 739, 2061 |
| EcoT14I | CCWWGG | 4 cut(s) | 406, 803, 2092, 2405 |
| EcoT22I | ATGCAT | 1 cut(s) | 480 |
| ErhI | CCWWGG | 4 cut(s) | 406, 803, 2092, 2405 |
| Esp3I | CGTCTC | 1 cut(s) | 1156 |
| FaqI | GGGAC | 2 cut(s) | 142, 1706 |
| FauI | CCCGC | 1 cut(s) | 1729 |
| FbaI | TGATCA | 2 cut(s) | 22, 783 |
| FblI | GTMKAC | 1 cut(s) | 1012 |
| FokI | GGATG | 7 cut(s) | 173, 224, 440, 487, 1430, 1647, 1651 |
| FspBI | CTAG | 7 cut(s) | 443, 488, 953, 1356, 1832, 1904, 1932 |
| FspI | TGCGCA | 1 cut(s) | 678 |
| GlaI | GCGC | 5 cut(s) | 678, 1309, 2058, 2122, 2151 |
| GsaI | CCCAGC | 1 cut(s) | 1660 |
| HaeII | RGCGCY | 2 cut(s) | 2060, 2124 |
| HaeIII | GGCC | 3 cut(s) | 1874, 2288, 2410 |
| HapII | CCGG | 5 cut(s) | 1428, 2289, 2354, 2414, 2441 |
| HgaI | GACGC | 1 cut(s) | 1173 |
| HhaI | GCGC | 5 cut(s) | 679, 1310, 2059, 2123, 2152 |
| Hin6I | GCGC | 5 cut(s) | 677, 1308, 2057, 2121, 2150 |
| HinP1I | GCGC | 5 cut(s) | 677, 1308, 2057, 2121, 2150 |
| HincII | GTYRAC | 2 cut(s) | 1013, 1231 |
| HindII | GTYRAC | 2 cut(s) | 1013, 1231 |
| HindIII | AAGCTT | 2 cut(s) | 1099, 1144 |
| HpaI | GTTAAC | 1 cut(s) | 1231 |
| HpaII | CCGG | 5 cut(s) | 1428, 2289, 2354, 2414, 2441 |
| HphI | GGTGA | 4 cut(s) | 813, 1656, 2428, 2430 |
| Hpy166II | GTNNAC | 5 cut(s) | 80, 1013, 1184, 1214, 1231 |
| Hpy188III | TCNNGA | 5 cut(s) | 244, 730, 971, 1258, 1602 |
| Hpy8I | GTNNAC | 5 cut(s) | 80, 1013, 1184, 1214, 1231 |
| Hpy99I | CGWCG | 1 cut(s) | 1180 |
| HpyAV | CCTTC | 8 cut(s) | 460, 733, 738, 1264, 1360, 1709, 1945, 2245 |
| HpyCH4III | ACNGT | 5 cut(s) | 182, 837, 1045, 1485, 2076 |
| HpyF3I | CTNAG | 2 cut(s) | 483, 2135 |
| HspAI | GCGC | 5 cut(s) | 677, 1308, 2057, 2121, 2150 |
| Ksp22I | TGATCA | 2 cut(s) | 22, 783 |
| KspAI | GTTAAC | 1 cut(s) | 1231 |
| Kzo9I | GATC | 8 cut(s) | 22, 714, 783, 1263, 1330, 2018, 2330, 2371 |
| LmnI | GCTCC | 4 cut(s) | 1078, 1679, 1999, 2291 |
| Lsp1109I | GCAGC | 9 cut(s) | 165, 499, 785, 1973, 1980, 1989, 2006, 2110, 2159 |
| LweI | GCATC | 4 cut(s) | 465, 1043, 1691, 2161 |
| MaeI | CTAG | 7 cut(s) | 443, 488, 953, 1356, 1832, 1904, 1932 |
| MaeIII | GTNAC | 8 cut(s) | 208, 227, 324, 961, 1039, 1550, 2416, 2436 |
| MalI | GATC | 8 cut(s) | 24, 716, 785, 1265, 1332, 2020, 2332, 2373 |
| MbiI | CCGCTC | 1 cut(s) | 1736 |
| MboI | GATC | 8 cut(s) | 22, 714, 783, 1263, 1330, 2018, 2330, 2371 |
| MboII | GAAGA | 7 cut(s) | 107, 112, 770, 968, 2147, 2182, 2250 |
| MfeI | CAATTG | 3 cut(s) | 680, 704, 1519 |
| MflI | RGATCY | 2 cut(s) | 2018, 2330 |
| MhlI | GDGCHC | 2 cut(s) | 1481, 2296 |
| MluI | ACGCGT | 1 cut(s) | 494 |
| MlyI | GAGTC | 2 cut(s) | 124, 1694 |
| MmeI | TCCRAC | 1 cut(s) | 1199 |
| Mph1103I | ATGCAT | 1 cut(s) | 480 |
| MseI | TTAA | 8 cut(s) | 461, 528, 536, 1026, 1110, 1230, 1436, 1458 |
| MspA1I | CMGCKG | 2 cut(s) | 1656, 1997 |
| MspI | CCGG | 5 cut(s) | 1428, 2289, 2354, 2414, 2441 |
| MspR9I | CCNGG | 3 cut(s) | 741, 2063, 2354 |
| MunI | CAATTG | 3 cut(s) | 680, 704, 1519 |
| MvaI | CCWGG | 2 cut(s) | 741, 2063 |
| MvnI | CGCG | 3 cut(s) | 496, 1167, 2399 |
| NciI | CCSGG | 1 cut(s) | 2354 |
| NcoI | CCATGG | 1 cut(s) | 406 |
| NdeII | GATC | 8 cut(s) | 22, 714, 783, 1263, 1330, 2018, 2330, 2371 |
| NheI | GCTAGC | 1 cut(s) | 487 |
| NlaIV | GGNNCC | 3 cut(s) | 1957, 2073, 2332 |
| NmuCI | GTSAC | 3 cut(s) | 208, 2416, 2436 |
| NsbI | TGCGCA | 1 cut(s) | 678 |
| NsiI | ATGCAT | 1 cut(s) | 480 |
| NspI | RCATGY | 5 cut(s) | 482, 1394, 1497, 1831, 2396 |
| NspV | TTCGAA | 2 cut(s) | 859, 1708 |
| PaeI | GCATGC | 5 cut(s) | 482, 1394, 1497, 1831, 2396 |
| PagI | TCATGA | 1 cut(s) | 1257 |
| PfeI | GAWTC | 9 cut(s) | 606, 943, 974, 1153, 2177, 2190, 2265, 2301, 2366 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 2068 |
| PleI | GAGTC | 2 cut(s) | 124, 1694 |
| PpsI | GAGTC | 2 cut(s) | 124, 1694 |
| Psp6I | CCWGG | 2 cut(s) | 739, 2061 |
| PspEI | GGTNACC | 1 cut(s) | 2416 |
| PspFI | CCCAGC | 1 cut(s) | 1656 |
| PspGI | CCWGG | 2 cut(s) | 739, 2061 |
| PspN4I | GGNNCC | 3 cut(s) | 1957, 2073, 2332 |
| PspPI | GGNCC | 1 cut(s) | 2382 |
| PstI | CTGCAG | 1 cut(s) | 775 |
| PsuI | RGATCY | 2 cut(s) | 2018, 2330 |
| PvuII | CAGCTG | 1 cut(s) | 1656 |
| RsaI | GTAC | 5 cut(s) | 466, 738, 1185, 1342, 1572 |
| RsaNI | GTAC | 5 cut(s) | 465, 737, 1184, 1341, 1571 |
| SalI | GTCGAC | 1 cut(s) | 1011 |
| SaqAI | TTAA | 8 cut(s) | 461, 528, 536, 1026, 1110, 1230, 1436, 1458 |
| Sau3AI | GATC | 8 cut(s) | 22, 714, 783, 1263, 1330, 2018, 2330, 2371 |
| Sau96I | GGNCC | 1 cut(s) | 2382 |
| ScaI | AGTACT | 2 cut(s) | 466, 1342 |
| SchI | GAGTC | 2 cut(s) | 124, 1694 |
| ScrFI | CCNGG | 3 cut(s) | 741, 2063, 2354 |
| SduI | GDGCHC | 2 cut(s) | 1481, 2296 |
| SfaNI | GCATC | 4 cut(s) | 465, 1043, 1691, 2161 |
| SfcI | CTRYAG | 2 cut(s) | 771, 1407 |
| SfuI | TTCGAA | 2 cut(s) | 859, 1708 |
| SinI | GGWCC | 1 cut(s) | 2382 |
| SmlI | CTYRAG | 1 cut(s) | 2246 |
| SmoI | CTYRAG | 1 cut(s) | 2246 |
| SphI | GCATGC | 5 cut(s) | 482, 1394, 1497, 1831, 2396 |
| SsiI | CCGC | 9 cut(s) | 1167, 1431, 1736, 1750, 1883, 1959, 1997, 2066, 2397 |
| SspI | AATATT | 2 cut(s) | 864, 1087 |
| SspMI | CTAG | 7 cut(s) | 443, 488, 953, 1356, 1832, 1904, 1932 |
| StyD4I | CCNGG | 3 cut(s) | 739, 2061, 2352 |
| StyI | CCWWGG | 4 cut(s) | 406, 803, 2092, 2405 |
| TaaI | ACNGT | 5 cut(s) | 182, 837, 1045, 1485, 2076 |
| TatI | WGTACW | 3 cut(s) | 464, 1340, 1570 |
| TauI | GCSGC | 3 cut(s) | 1170, 1886, 2399 |
| TfiI | GAWTC | 9 cut(s) | 606, 943, 974, 1153, 2177, 2190, 2265, 2301, 2366 |
| Tru1I | TTAA | 8 cut(s) | 461, 528, 536, 1026, 1110, 1230, 1436, 1458 |
| Tru9I | TTAA | 8 cut(s) | 461, 528, 536, 1026, 1110, 1230, 1436, 1458 |
| TscAI | CASTG | 3 cut(s) | 1392, 1488, 2384 |
| TseFI | GTSAC | 3 cut(s) | 208, 2416, 2436 |
| TseI | GCWGC | 9 cut(s) | 153, 512, 773, 1961, 1968, 1994, 2002, 2123, 2147 |
| Tsp45I | GTSAC | 3 cut(s) | 208, 2416, 2436 |
| TspGWI | ACGGA | 1 cut(s) | 374 |
| TspRI | CASTG | 3 cut(s) | 1392, 1488, 2384 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 2068 |
| VpaK11BI | GGWCC | 1 cut(s) | 2382 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 2249 |
| XapI | RAATTY | 5 cut(s) | 247, 812, 1530, 1867, 2026 |
| XceI | RCATGY | 5 cut(s) | 482, 1394, 1497, 1831, 2396 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 747 |
| XmiI | GTMKAC | 1 cut(s) | 1012 |
| XspI | CTAG | 7 cut(s) | 443, 488, 953, 1356, 1832, 1904, 1932 |
| ZrmI | AGTACT | 2 cut(s) | 466, 1342 |
| Zsp2I | ATGCAT | 1 cut(s) | 480 |