DNA binding
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G11591 |
| fragaria_vesca | FvH4_2g20411 FvH4_2g29931 FvH4_3g14181 FvH4_4g00781 FvH4_4g12541 FvH4_5g22143 FvH4_7g24581 |
| pyrus_communis | pycom04g03170 pycom05g18080 pycom12g05030 pycom13g18540 |
| rosa_chinensis | RchiOBHm_Chr1g0313681 RchiOBHm_Chr1g0344501 RchiOBHm_Chr2g0157511 |
| rosa_laevigata | RLG00000008144 RLG00000008360 |
| rosa_multiflora | Rmu_sc0003765.1_g000035 Rmu_sc0004343.1_g000026 Rmu_sc0006087.1_g000011 |
| rosa_roxburghii | Rroxscaffold_1G00038680 Rroxscaffold_3G00247490 Rroxscaffold_4G00315330 Rroxscaffold_5G00355970 Rroxscaffold_7G00214090 |
| rosa_rugosa | Rorug04G0109300 Rorug04G0109400 |
| rosa_samantha | Rh1AG403200 Rh4AG167500 Rh4BG164600 Rh4CG179400 Rh4DG162300 |
| rosa_wichuraiana | Rw4G013620 Rw4G013850 Rw4G013950 Rw6G038170 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclI | AACGTT | 1 cut(s) | 306 |
| AcsI | RAATTY | 2 cut(s) | 76, 268 |
| AcvI | CACGTG | 1 cut(s) | 403 |
| AfaI | GTAC | 1 cut(s) | 334 |
| AgsI | TTSAA | 2 cut(s) | 81, 285 |
| AjiI | CACGTC | 1 cut(s) | 6 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 98, 130 |
| AluBI | AGCT | 1 cut(s) | 227 |
| AluI | AGCT | 1 cut(s) | 227 |
| Alw21I | GWGCWC | 2 cut(s) | 11, 346 |
| Alw26I | GTCTC | 1 cut(s) | 144 |
| Alw44I | GTGCAC | 2 cut(s) | 7, 342 |
| AoxI | GGCC | 1 cut(s) | 120 |
| ApaLI | GTGCAC | 2 cut(s) | 7, 342 |
| ApoI | RAATTY | 2 cut(s) | 76, 268 |
| AsuHPI | GGTGA | 1 cut(s) | 146 |
| BaeGI | GKGCMC | 2 cut(s) | 11, 346 |
| BbrPI | CACGTG | 1 cut(s) | 403 |
| BbsI | GAAGAC | 1 cut(s) | 253 |
| Bbv12I | GWGCWC | 2 cut(s) | 11, 346 |
| BccI | CCATC | 1 cut(s) | 190 |
| BcoDI | GTCTC | 1 cut(s) | 144 |
| BmgBI | CACGTC | 1 cut(s) | 6 |
| BmsI | GCATC | 1 cut(s) | 252 |
| BpiI | GAAGAC | 1 cut(s) | 253 |
| Bpu10I | CCTNAGC | 1 cut(s) | 435 |
| BsaAI | YACGTR | 1 cut(s) | 403 |
| BsaJI | CCNNGG | 1 cut(s) | 117 |
| Bse1I | ACTGG | 1 cut(s) | 31 |
| BseDI | CCNNGG | 1 cut(s) | 117 |
| BseNI | ACTGG | 1 cut(s) | 31 |
| BseRI | GAGGAG | 2 cut(s) | 67, 162 |
| BseSI | GKGCMC | 2 cut(s) | 11, 346 |
| BshFI | GGCC | 1 cut(s) | 122 |
| BsiHKAI | GWGCWC | 2 cut(s) | 11, 346 |
| BslFI | GGGAC | 2 cut(s) | 114, 213 |
| BsmAI | GTCTC | 1 cut(s) | 144 |
| BsmFI | GGGAC | 2 cut(s) | 114, 213 |
| BsnI | GGCC | 1 cut(s) | 122 |
| Bsp1286I | GDGCHC | 2 cut(s) | 11, 346 |
| Bsp143I | GATC | 1 cut(s) | 213 |
| BspANI | GGCC | 1 cut(s) | 122 |
| BsrI | ACTGG | 1 cut(s) | 31 |
| BssECI | CCNNGG | 1 cut(s) | 117 |
| BssMI | GATC | 1 cut(s) | 213 |
| BssT1I | CCWWGG | 1 cut(s) | 117 |
| Bst6I | CTCTTC | 1 cut(s) | 315 |
| BstBAI | YACGTR | 1 cut(s) | 403 |
| BstC8I | GCNNGC | 1 cut(s) | 229 |
| BstDEI | CTNAG | 1 cut(s) | 435 |
| BstKTI | GATC | 1 cut(s) | 216 |
| BstMAI | GTCTC | 1 cut(s) | 144 |
| BstMBI | GATC | 1 cut(s) | 213 |
| BstSLI | GKGCMC | 2 cut(s) | 11, 346 |
| BstV2I | GAAGAC | 1 cut(s) | 253 |
| BsuRI | GGCC | 1 cut(s) | 122 |
| BtrI | CACGTC | 1 cut(s) | 6 |
| BtsI | GCAGTG | 1 cut(s) | 447 |
| BtsIMutI | CAGTG | 2 cut(s) | 24, 447 |
| Cac8I | GCNNGC | 1 cut(s) | 229 |
| Csp6I | GTAC | 1 cut(s) | 333 |
| CviAII | CATG | 1 cut(s) | 154 |
| CviJI | RGCY | 5 cut(s) | 64, 122, 158, 227, 359 |
| CviKI_1 | RGCY | 5 cut(s) | 64, 122, 158, 227, 359 |
| CviQI | GTAC | 1 cut(s) | 333 |
| DdeI | CTNAG | 1 cut(s) | 435 |
| DpnI | GATC | 1 cut(s) | 215 |
| DpnII | GATC | 1 cut(s) | 213 |
| Eam1104I | CTCTTC | 1 cut(s) | 315 |
| EarI | CTCTTC | 1 cut(s) | 315 |
| Eco130I | CCWWGG | 1 cut(s) | 117 |
| Eco72I | CACGTG | 1 cut(s) | 403 |
| EcoRI | GAATTC | 2 cut(s) | 76, 268 |
| EcoT14I | CCWWGG | 1 cut(s) | 117 |
| ErhI | CCWWGG | 1 cut(s) | 117 |
| FaeI | CATG | 1 cut(s) | 157 |
| FaiI | YATR | 6 cut(s) | 18, 155, 318, 373, 409, 447 |
| FaqI | GGGAC | 2 cut(s) | 114, 213 |
| FatI | CATG | 1 cut(s) | 153 |
| HaeIII | GGCC | 1 cut(s) | 122 |
| Hin1II | CATG | 1 cut(s) | 157 |
| HphI | GGTGA | 1 cut(s) | 146 |
| Hpy166II | GTNNAC | 2 cut(s) | 9, 344 |
| Hpy188III | TCNNGA | 1 cut(s) | 217 |
| Hpy8I | GTNNAC | 2 cut(s) | 9, 344 |
| HpyAV | CCTTC | 4 cut(s) | 14, 131, 236, 291 |
| HpyCH4IV | ACGT | 3 cut(s) | 5, 306, 402 |
| HpyCH4V | TGCA | 4 cut(s) | 9, 344, 411, 445 |
| HpyF3I | CTNAG | 1 cut(s) | 435 |
| HpySE526I | ACGT | 3 cut(s) | 5, 306, 402 |
| Hsp92II | CATG | 1 cut(s) | 157 |
| Kzo9I | GATC | 1 cut(s) | 213 |
| LmnI | GCTCC | 1 cut(s) | 224 |
| LpnPI | CCDG | 3 cut(s) | 12, 213, 315 |
| LweI | GCATC | 1 cut(s) | 252 |
| MaeII | ACGT | 3 cut(s) | 5, 306, 402 |
| MaeIII | GTNAC | 2 cut(s) | 302, 395 |
| MalI | GATC | 1 cut(s) | 215 |
| MboI | GATC | 1 cut(s) | 213 |
| MboII | GAAGA | 2 cut(s) | 258, 332 |
| MhlI | GDGCHC | 2 cut(s) | 11, 346 |
| MluCI | AATT | 7 cut(s) | 40, 76, 124, 268, 313, 336, 412 |
| MnlI | CCTC | 4 cut(s) | 45, 91, 140, 173 |
| MseI | TTAA | 1 cut(s) | 206 |
| NdeII | GATC | 1 cut(s) | 213 |
| NlaIII | CATG | 1 cut(s) | 157 |
| NmuCI | GTSAC | 1 cut(s) | 395 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 303 |
| PmaCI | CACGTG | 1 cut(s) | 403 |
| PmlI | CACGTG | 1 cut(s) | 403 |
| Ppu21I | YACGTR | 1 cut(s) | 403 |
| Psp1406I | AACGTT | 1 cut(s) | 306 |
| PspCI | CACGTG | 1 cut(s) | 403 |
| RsaI | GTAC | 1 cut(s) | 334 |
| RsaNI | GTAC | 1 cut(s) | 333 |
| SaqAI | TTAA | 1 cut(s) | 206 |
| Sau3AI | GATC | 1 cut(s) | 213 |
| SduI | GDGCHC | 2 cut(s) | 11, 346 |
| SetI | ASST | 6 cut(s) | 8, 165, 229, 309, 334, 405 |
| SfaNI | GCATC | 1 cut(s) | 252 |
| Sse9I | AATT | 7 cut(s) | 40, 76, 124, 268, 313, 336, 412 |
| StyI | CCWWGG | 1 cut(s) | 117 |
| TaiI | ACGT | 3 cut(s) | 8, 309, 405 |
| TasI | AATT | 7 cut(s) | 40, 76, 124, 268, 313, 336, 412 |
| Tru1I | TTAA | 1 cut(s) | 206 |
| Tru9I | TTAA | 1 cut(s) | 206 |
| TscAI | CASTG | 2 cut(s) | 31, 447 |
| TseFI | GTSAC | 1 cut(s) | 395 |
| Tsp45I | GTSAC | 1 cut(s) | 395 |
| TspDTI | ATGAA | 4 cut(s) | 33, 255, 261, 333 |
| TspRI | CASTG | 2 cut(s) | 31, 447 |
| VneI | GTGCAC | 2 cut(s) | 7, 342 |
| XapI | RAATTY | 2 cut(s) | 76, 268 |