Zinc finger HIT domain-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_3g32050 |
| malus_domestica | MD00G1182400.v1.1 MD12G1073000.v1.1 |
| rosa_chinensis | RchiOBHm_Chr6g0259031 RchiOBHm_Chr7g0184131 |
| rosa_laevigata | RLG00000014562 |
| rosa_multiflora | Rmu_co8134094.1_g000001 Rmu_sc0000049.1_g000001 Rmu_sc0000419.1_g000020 Rmu_sc0000441.1_g000126 Rmu_sc0001192.1_g000045 Rmu_sc0002312.1_g000001 Rmu_sc0002876.1_g000002 Rmu_sc0010605.1_g000001 Rmu_sc0011434.1_g000002 Rmu_ssc0000050.1_g000114 |
| rosa_roxburghii | Rroxscaffold_1G00029840 Rroxscaffold_2G00142140 Rroxscaffold_4G00282660 Rroxscaffold_6G00408520 |
| rosa_rugosa | Rorug05G0585000 |
| rosa_samantha | Rh4AG076700 Rh4CG081600 Rh6AG101500 Rh6BG093500 Rh6BG192100 Rh6DG084800 Rh7AG082500 Rh7BG211600 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 1 cut(s) | 323 |
| AciI | CCGC | 2 cut(s) | 321, 323 |
| AclWI | GGATC | 2 cut(s) | 242, 255 |
| AcsI | RAATTY | 2 cut(s) | 97, 112 |
| AgsI | TTSAA | 3 cut(s) | 102, 262, 374 |
| AluBI | AGCT | 3 cut(s) | 125, 161, 206 |
| AluI | AGCT | 3 cut(s) | 125, 161, 206 |
| AlwI | GGATC | 2 cut(s) | 242, 255 |
| AoxI | GGCC | 1 cut(s) | 20 |
| ApoI | RAATTY | 2 cut(s) | 97, 112 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 194 |
| BamHI | GGATCC | 1 cut(s) | 247 |
| BfaI | CTAG | 2 cut(s) | 273, 332 |
| BmiI | GGNNCC | 1 cut(s) | 249 |
| BsaJI | CCNNGG | 3 cut(s) | 242, 251, 321 |
| BseDI | CCNNGG | 3 cut(s) | 242, 251, 321 |
| BseMII | CTCAG | 1 cut(s) | 45 |
| BseRI | GAGGAG | 2 cut(s) | 71, 161 |
| Bsh1236I | CGCG | 1 cut(s) | 323 |
| BshFI | GGCC | 1 cut(s) | 22 |
| BslFI | GGGAC | 1 cut(s) | 380 |
| BsmFI | GGGAC | 1 cut(s) | 380 |
| BsmI | GAATGC | 1 cut(s) | 89 |
| BsnI | GGCC | 1 cut(s) | 22 |
| Bsp143I | GATC | 1 cut(s) | 247 |
| BspACI | CCGC | 2 cut(s) | 321, 323 |
| BspANI | GGCC | 1 cut(s) | 22 |
| BspCNI | CTCAG | 1 cut(s) | 46 |
| BspFNI | CGCG | 1 cut(s) | 323 |
| BspLI | GGNNCC | 1 cut(s) | 249 |
| BspPI | GGATC | 2 cut(s) | 242, 255 |
| BssECI | CCNNGG | 3 cut(s) | 242, 251, 321 |
| BssMI | GATC | 1 cut(s) | 247 |
| BssT1I | CCWWGG | 2 cut(s) | 242, 251 |
| BstDEI | CTNAG | 1 cut(s) | 54 |
| BstDSI | CCRYGG | 1 cut(s) | 321 |
| BstFNI | CGCG | 1 cut(s) | 323 |
| BstKTI | GATC | 1 cut(s) | 250 |
| BstMBI | GATC | 1 cut(s) | 247 |
| BstUI | CGCG | 1 cut(s) | 323 |
| BstX2I | RGATCY | 1 cut(s) | 247 |
| BstYI | RGATCY | 1 cut(s) | 247 |
| BsuRI | GGCC | 1 cut(s) | 22 |
| BtgI | CCRYGG | 1 cut(s) | 321 |
| Cfr42I | CCGCGG | 1 cut(s) | 324 |
| CviAII | CATG | 1 cut(s) | 88 |
| CviJI | RGCY | 8 cut(s) | 22, 73, 125, 161, 171, 206, 241, 265 |
| CviKI_1 | RGCY | 8 cut(s) | 22, 73, 125, 161, 171, 206, 241, 265 |
| DdeI | CTNAG | 1 cut(s) | 54 |
| DpnI | GATC | 1 cut(s) | 249 |
| DpnII | GATC | 1 cut(s) | 247 |
| Eco130I | CCWWGG | 2 cut(s) | 242, 251 |
| EcoRI | GAATTC | 1 cut(s) | 97 |
| EcoT14I | CCWWGG | 2 cut(s) | 242, 251 |
| EcoT22I | ATGCAT | 1 cut(s) | 89 |
| ErhI | CCWWGG | 2 cut(s) | 242, 251 |
| FaeI | CATG | 1 cut(s) | 91 |
| FaiI | YATR | 8 cut(s) | 89, 110, 140, 214, 216, 344, 386, 388 |
| FaqI | GGGAC | 1 cut(s) | 380 |
| FatI | CATG | 1 cut(s) | 87 |
| FauNDI | CATATG | 1 cut(s) | 214 |
| FspBI | CTAG | 2 cut(s) | 273, 332 |
| HaeIII | GGCC | 1 cut(s) | 22 |
| Hin1II | CATG | 1 cut(s) | 91 |
| HinfI | GANTC | 2 cut(s) | 62, 128 |
| Hpy188I | TCNGA | 1 cut(s) | 44 |
| HpyAV | CCTTC | 2 cut(s) | 276, 290 |
| HpyCH4V | TGCA | 3 cut(s) | 87, 212, 380 |
| HpyF3I | CTNAG | 1 cut(s) | 54 |
| Hsp92II | CATG | 1 cut(s) | 91 |
| KspI | CCGCGG | 1 cut(s) | 324 |
| Kzo9I | GATC | 1 cut(s) | 247 |
| MaeI | CTAG | 2 cut(s) | 273, 332 |
| MalI | GATC | 1 cut(s) | 249 |
| MboI | GATC | 1 cut(s) | 247 |
| MboII | GAAGA | 3 cut(s) | 164, 167, 194 |
| MflI | RGATCY | 1 cut(s) | 247 |
| MluCI | AATT | 5 cut(s) | 97, 112, 221, 234, 309 |
| MmeI | TCCRAC | 1 cut(s) | 341 |
| MnlI | CCTC | 6 cut(s) | 20, 49, 50, 52, 139, 142 |
| Mph1103I | ATGCAT | 1 cut(s) | 89 |
| MroXI | GAANNNNTTC | 1 cut(s) | 194 |
| MseI | TTAA | 2 cut(s) | 116, 237 |
| MspA1I | CMGCKG | 1 cut(s) | 323 |
| Mva1269I | GAATGC | 1 cut(s) | 89 |
| MvnI | CGCG | 1 cut(s) | 323 |
| NdeI | CATATG | 1 cut(s) | 214 |
| NdeII | GATC | 1 cut(s) | 247 |
| NlaIII | CATG | 1 cut(s) | 91 |
| NlaIV | GGNNCC | 1 cut(s) | 249 |
| NsiI | ATGCAT | 1 cut(s) | 89 |
| PctI | GAATGC | 1 cut(s) | 89 |
| PdmI | GAANNNNTTC | 1 cut(s) | 194 |
| PfeI | GAWTC | 2 cut(s) | 62, 128 |
| PspN4I | GGNNCC | 1 cut(s) | 249 |
| PsuI | RGATCY | 1 cut(s) | 247 |
| SacII | CCGCGG | 1 cut(s) | 324 |
| SaqAI | TTAA | 2 cut(s) | 116, 237 |
| Sau3AI | GATC | 1 cut(s) | 247 |
| SetI | ASST | 5 cut(s) | 127, 163, 208, 340, 398 |
| Sfr303I | CCGCGG | 1 cut(s) | 324 |
| SgrBI | CCGCGG | 1 cut(s) | 324 |
| Sse9I | AATT | 5 cut(s) | 97, 112, 221, 234, 309 |
| SsiI | CCGC | 2 cut(s) | 321, 323 |
| SspMI | CTAG | 2 cut(s) | 273, 332 |
| StyI | CCWWGG | 2 cut(s) | 242, 251 |
| TaqI | TCGA | 1 cut(s) | 135 |
| TasI | AATT | 5 cut(s) | 97, 112, 221, 234, 309 |
| TfiI | GAWTC | 2 cut(s) | 62, 128 |
| Tru1I | TTAA | 2 cut(s) | 116, 237 |
| Tru9I | TTAA | 2 cut(s) | 116, 237 |
| TspDTI | ATGAA | 1 cut(s) | 195 |
| XapI | RAATTY | 2 cut(s) | 97, 112 |
| XmnI | GAANNNNTTC | 1 cut(s) | 194 |
| XspI | CTAG | 2 cut(s) | 273, 332 |
| Zsp2I | ATGCAT | 1 cut(s) | 89 |