Rh6BG192100

No description available

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6B
Physical Location & Seq
Forward (+)
35827531 .. 35839453
11923 bp
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UTR
Exon/CDS
Intron
Rh6BG192100.1

Sequence Viewer

Length: 180 bp
ATGAAAATCATTAGCGGAATGACACAAGAGATTCTGGTGTATTTGATTTCCACAAATGTTGTTCAAATGTTTGGTGGCACTATCTGTTGTCATATCCAACATGTGGATAATGACAAGGTCCAGACTTTGCTTCTACGGATACAAGACGCAACAAAACAACAAATAGCAGCAACAAATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

59

Amino Acids

6.59

Weight (kDa)

6.69

Isoelectric Point (pI)

32.05

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 103
AciI CCGC 1 cut(s) 15
AfiI CCNNNNNNNGG 1 cut(s) 103
AflIII ACRYGT 1 cut(s) 100
AgsI TTSAA 1 cut(s) 65
ApeKI GCWGC 1 cut(s) 167
AspS9I GGNCC 1 cut(s) 118
AvaII GGWCC 1 cut(s) 118
BciVI GTATCC 1 cut(s) 132
BfuI GTATCC 1 cut(s) 132
BisI GCNGC 1 cut(s) 168
BlsI GCNGC 1 cut(s) 169
Bme18I GGWCC 1 cut(s) 118
BmgT120I GGNCC 1 cut(s) 118
Bsc4I CCNNNNNNNGG 1 cut(s) 103
BseLI CCNNNNNNNGG 1 cut(s) 103
BslI CCNNNNNNNGG 1 cut(s) 103
BspACI CCGC 1 cut(s) 15
BstNSI RCATGY 1 cut(s) 104
BsuI GTATCC 1 cut(s) 132
Cfr13I GGNCC 1 cut(s) 118
CseI GACGC 1 cut(s) 155
CspCI CAANNNNNGTGG 2 cut(s) 40, 75
CviAII CATG 1 cut(s) 101
Eco47I GGWCC 1 cut(s) 118
FaeI CATG 1 cut(s) 104
FaiI YATR 2 cut(s) 93, 102
FatI CATG 1 cut(s) 100
Fnu4HI GCNGC 1 cut(s) 168
Fsp4HI GCNGC 1 cut(s) 168
FspEI CC 9 cut(s) 20, 57, 60, 64, 89, 101, 110, 121, 134
GluI GCNGC 1 cut(s) 168
HgaI GACGC 1 cut(s) 155
Hin1II CATG 1 cut(s) 104
HinfI GANTC 1 cut(s) 31
Hpy188III TCNNGA 1 cut(s) 121
Hsp92II CATG 1 cut(s) 104
LpnPI CCDG 2 cut(s) 20, 134
MluCI AATT 1 cut(s) 175
MmeI TCCRAC 1 cut(s) 121
MseI TTAA 1 cut(s) 178
NlaIII CATG 1 cut(s) 104
NspI RCATGY 1 cut(s) 104
PciI ACATGT 1 cut(s) 100
PfeI GAWTC 1 cut(s) 31
PflFI GACNNNGTC 1 cut(s) 116
PflMI CCANNNNNTGG 1 cut(s) 103
PkrI GCNGC 1 cut(s) 169
PscI ACATGT 1 cut(s) 100
PspPI GGNCC 1 cut(s) 118
PsyI GACNNNGTC 1 cut(s) 116
SaqAI TTAA 1 cut(s) 178
SatI GCNGC 1 cut(s) 168
Sau96I GGNCC 1 cut(s) 118
SetI ASST 1 cut(s) 120
SgeI CNNG 6 cut(s) 38, 47, 113, 127, 133, 155
SinI GGWCC 1 cut(s) 118
Sse9I AATT 1 cut(s) 175
SsiI CCGC 1 cut(s) 15
TasI AATT 1 cut(s) 175
TfiI GAWTC 1 cut(s) 31
Tru1I TTAA 1 cut(s) 178
Tru9I TTAA 1 cut(s) 178
TseI GCWGC 1 cut(s) 167
TspDTI ATGAA 1 cut(s) 17
TspGWI ACGGA 1 cut(s) 151
Tth111I GACNNNGTC 1 cut(s) 116
Van91I CCANNNNNTGG 1 cut(s) 103
VpaK11BI GGWCC 1 cut(s) 118
XceI RCATGY 1 cut(s) 104
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.