FvH4_3g40850

26S protease regulatory subunit 6B

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
OG0002106
Physical Location & Seq
Reverse (-)
34401288 .. 34404996
3709 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g40850.t1

Sequence Viewer

Length: 1257 bp
ATGGCGTCAGCGATGGTTCTGGACCCGAAACCCCTACCGGAGCCACCGGCCTCGGTTCCCTCCCTCAGATCCGACCCGGCCTTCACCGACCCGACCTCCTCCGACGAGGACTCCGACCTCTACAGCCGTCTCAAGGCGCTGCAACGCCAGAACGAGTTCATCGACATCAAGGAGGAGTACGTCAAGGACGAGCAGAAGAATCTGAAGCGGGAGATGCTCCGGTCGCAGGAGGAGGTGAAGCGGATCCAGTCGGTGCCGCTGGTGATCGGTCAGTTTCTGGAGATGGTGGACGAGAACCACGGCATTGTGGGGTCCACGACGGGCTCGAATTACTATGTGAGGATTCTGAGTACGATTAACCGGGAGCATCTGAAGCCCTCGGCGTCGGTGGCCTTGCACCGCCACTCCAATGCTCTTGTGGATGTTCTGCCGCCGGAAGCGGACTCGAGTATCTCGCTGCTCAGCCAGTCGGAGAAGCCTGACGTCACCTACAGCGATATTGGAGGGTGTGATATTCAGAAGCAAGAAATCCGTGAAGCAGTGGAACTTCCACTTACTCACCATGACTTATACAAACAGATTGGAATAGACCCTCCACGTGGTGTGTTGCTCTATGGTCCTCCTGGAACTGGTAAAACCATGCTAGCTAAGGCTGTTGCTAACTCTACAACTGCTGCCTTCATCAGAGTTGTTGGTTCAGAATTTGTTCAGAAGTACTTGGGAGAGGGTCCACGAATGGTTCGTGATGTTTTCCGTCTTGCCAAGGAGAATGCACCTGCCATTATCTTTATTGATGAGGTTGATGCTATTGCTACTGCAAGGTTTGATGCTCAAACTGGAGCTGATAGAGAAGTTCAGCGAATCCTAATGGAGCTCCTCAATCAGATGGATGGGTTTGACCAGACTGTAAATGTTAAGGTCATAATGGCTACTAATAGGGCAGACACTTTGGATCCTGCACTTCTGCGTCCCGGAAGGCTTGACCGTAAGATTGAATTTCCTCTGCCTGATAGGCGACAGAAAAGACTTGTTTTTCAGGTTTGCACTGCTAAAATGAACTTGAGTGATGAGGTAGACTTGGAAGATTATGTTTCTCGGCCAGATAAAATCAGTGCTGCTGAGATTACAGCTATATGTCAAGAAGCCGGAATGCATGCTGTCCGCAAGAACCGATATGTCATCCTCCCAAAGGACTTTGAAAAGGGTTATCAAACCAATGTGAAGAAGCCTGATACTGACTTTGAGTTCTACAAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000502 GO:0003674 GO:0003824 GO:0005488 GO:0005515 GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0005911 GO:0006355 GO:0006357 GO:0006508 GO:0006511 GO:0006807 GO:0006950 GO:0008134 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009506 GO:0009889 GO:0009891 GO:0009893 GO:0009894 GO:0009896 GO:0009987 GO:0010033 GO:0010243 GO:0010468 GO:0010498 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0016020 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017025 GO:0017111 GO:0019219 GO:0019222 GO:0019538 GO:0019941 GO:0030054 GO:0030162 GO:0030163 GO:0030312 GO:0030433 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031329 GO:0031331 GO:0031334 GO:0031595 GO:0031597 GO:0031974 GO:0031981 GO:0032268 GO:0032270 GO:0032991 GO:0033554 GO:0034976 GO:0036402 GO:0036503 GO:0042176 GO:0042221 GO:0042623 GO:0043161 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043254 GO:0043632 GO:0044087 GO:0044089 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044445 GO:0044446 GO:0044464 GO:0045732 GO:0045862 GO:0045893 GO:0045898 GO:0045899 GO:0045935 GO:0045944 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0050896 GO:0051128 GO:0051130 GO:0051171 GO:0051173 GO:0051246 GO:0051247 GO:0051252 GO:0051254 GO:0051603 GO:0051716 GO:0055044 GO:0060255 GO:0060260 GO:0060261 GO:0061136 GO:0065007 GO:0070013 GO:0071704 GO:0071944 GO:0080090 GO:1901564 GO:1901565 GO:1901575 GO:1901698 GO:1901800 GO:1902494 GO:1902680 GO:1903050 GO:1903052 GO:1903362 GO:1903364 GO:1903506 GO:1903508 GO:1905368 GO:1905369 GO:2000112 GO:2000142 GO:2000144 GO:2001141
KEGG Pathways
Metabolic & Signaling
ko03050 ko05169 map03050 map05169
Pfam Domains
Protein Families
AAA

Protein Analysis

419

Amino Acids

46.91

Weight (kDa)

5.4

Isoelectric Point (pI)

38.91

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Prot_ATP_ID_OB_C PF16450 89 - 144 3e-12 Proteasomal ATPase OB C-terminal domain
AAA_5 PF07728 201 - 323 1.7e-07 AAA domain (dynein-related subfamily)
AAA PF00004 202 - 335 2.6e-45 ATPase family associated with various cellular activities (AAA)
AAA_2 PF07724 202 - 295 3.6e-06 AAA domain (Cdc48 subfamily)
AAA_lid_3 PF17862 358 - 401 6.8e-07 AAA+ lid domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 784
AatII GACGTC 1 cut(s) 486
Acc36I ACCTGC 1 cut(s) 784
AccB1I GGYRCC 1 cut(s) 253
AccI GTMKAC 1 cut(s) 1074
AciI CCGC 7 cut(s) 208, 241, 257, 400, 431, 440, 1162
AclWI GGATC 5 cut(s) 63, 238, 251, 947, 960
AcoI YGGCCR 1 cut(s) 1097
AcsI RAATTY 2 cut(s) 701, 995
AcuI CTGAAG 2 cut(s) 224, 392
AcvI CACGTG 1 cut(s) 599
AcyI GRCGYC 3 cut(s) 5, 383, 483
AdeI CACNNNGTG 1 cut(s) 602
AfaI GTAC 3 cut(s) 179, 352, 716
AfiI CCNNNNNNNGG 5 cut(s) 133, 226, 599, 629, 1189
AgsI TTSAA 2 cut(s) 995, 1199
AjnI CCWGG 1 cut(s) 622
AluBI AGCT 4 cut(s) 647, 842, 874, 1130
AluI AGCT 4 cut(s) 647, 842, 874, 1130
Alw21I GWGCWC 1 cut(s) 876
Alw26I GTCTC 1 cut(s) 134
AlwI GGATC 5 cut(s) 63, 238, 251, 947, 960
AlwNI CAGNNNCTG 1 cut(s) 277
Ama87I CYCGRG 1 cut(s) 445
AoxI GGCC 4 cut(s) 48, 78, 390, 1097
ApeKI GCWGC 4 cut(s) 139, 457, 674, 1115
ApoI RAATTY 2 cut(s) 701, 995
Asp700I GAANNNNTTC 2 cut(s) 155, 705
AspLEI GCGC 1 cut(s) 139
AspS9I GGNCC 4 cut(s) 22, 312, 617, 728
AsuC2I CCSGG 3 cut(s) 77, 362, 972
AsuHPI GGTGA 5 cut(s) 76, 247, 274, 478, 551
AsuNHI GCTAGC 1 cut(s) 643
AvaI CYCGRG 1 cut(s) 445
AvaII GGWCC 4 cut(s) 22, 312, 617, 728
BaeI ACNNNNGTAYC 2 cut(s) 433, 466
BamHI GGATCC 2 cut(s) 243, 952
BanI GGYRCC 1 cut(s) 253
BanII GRGCYC 2 cut(s) 326, 876
BbrPI CACGTG 1 cut(s) 599
Bbv12I GWGCWC 1 cut(s) 876
BbvI GCAGC 4 cut(s) 126, 444, 661, 1102
BccI CCATC 4 cut(s) 7, 277, 880, 884
BceAI ACGGC 2 cut(s) 111, 316
BciT130I CCWGG 1 cut(s) 624
BcnI CCSGG 3 cut(s) 77, 362, 972
BcoDI GTCTC 1 cut(s) 134
BfaI CTAG 1 cut(s) 644
BfmI CTRYAG 2 cut(s) 121, 490
BfoI RGCGCY 1 cut(s) 140
BfuAI ACCTGC 1 cut(s) 784
BglI GCCNNNNNGGC 1 cut(s) 1012
BisI GCNGC 6 cut(s) 140, 257, 431, 458, 675, 1116
BlpI GCTNAGC 1 cut(s) 461
BlsI GCNGC 6 cut(s) 141, 258, 432, 459, 676, 1117
BmcAI AGTACT 1 cut(s) 716
Bme1390I CCNGG 4 cut(s) 77, 362, 624, 972
Bme18I GGWCC 4 cut(s) 22, 312, 617, 728
BmeT110I CYCGRG 1 cut(s) 445
BmgT120I GGNCC 4 cut(s) 22, 312, 617, 728
BmiI GGNNCC 8 cut(s) 24, 42, 57, 245, 255, 313, 729, 954
BmrFI CCNGG 4 cut(s) 77, 362, 624, 972
BmsI GCATC 4 cut(s) 204, 376, 793, 817
BmtI GCTAGC 1 cut(s) 647
BpmI CTGGAG 2 cut(s) 299, 858
Bpu10I CCTNAGC 1 cut(s) 648
Bpu1102I GCTNAGC 1 cut(s) 461
BpuEI CTTGAG 2 cut(s) 116, 1081
BpuMI CCSGG 3 cut(s) 77, 362, 972
BsaAI YACGTR 1 cut(s) 599
BsaHI GRCGYC 3 cut(s) 5, 383, 483
BsaJI CCNNGG 4 cut(s) 51, 298, 378, 762
BsaWI WCCGGW 2 cut(s) 37, 219
BsaXI ACNNNNNCTCC 6 cut(s) 80, 95, 110, 125, 389, 419
Bsc4I CCNNNNNNNGG 5 cut(s) 133, 226, 599, 629, 1189
Bse118I RCCGGY 1 cut(s) 46
Bse1I ACTGG 4 cut(s) 247, 466, 634, 841
BseBI CCWGG 1 cut(s) 624
BseDI CCNNGG 4 cut(s) 51, 298, 378, 762
BseGI GGATG 3 cut(s) 427, 895, 1179
BseLI CCNNNNNNNGG 5 cut(s) 133, 226, 599, 629, 1189
BseMII CTCAG 4 cut(s) 79, 338, 475, 1110
BseNI ACTGG 4 cut(s) 247, 466, 634, 841
BseRI GAGGAG 4 cut(s) 88, 188, 245, 866
BseXI GCAGC 4 cut(s) 126, 444, 661, 1102
BsgI GTGCAG 1 cut(s) 942
Bsh1285I CGRYCG 1 cut(s) 224
BshFI GGCC 4 cut(s) 50, 80, 392, 1099
BshNI GGYRCC 1 cut(s) 253
BsiEI CGRYCG 1 cut(s) 224
BsiHKAI GWGCWC 1 cut(s) 876
BsiHKCI CYCGRG 1 cut(s) 445
BsiSI CCGG 8 cut(s) 38, 47, 77, 220, 361, 434, 972, 1146
BslFI GGGAC 1 cut(s) 954
BslI CCNNNNNNNGG 5 cut(s) 133, 226, 599, 629, 1189
BsmAI GTCTC 1 cut(s) 134
BsmBI CGTCTC 1 cut(s) 134
BsmFI GGGAC 1 cut(s) 954
BsmI GAATGC 2 cut(s) 775, 1155
BsnI GGCC 4 cut(s) 50, 80, 392, 1099
BsoBI CYCGRG 1 cut(s) 445
Bsp1286I GDGCHC 2 cut(s) 326, 876
Bsp143I GATC 4 cut(s) 68, 243, 264, 952
Bsp1720I GCTNAGC 1 cut(s) 461
BspACI CCGC 7 cut(s) 208, 241, 257, 400, 431, 440, 1162
BspANI GGCC 4 cut(s) 50, 80, 392, 1099
BspCNI CTCAG 4 cut(s) 78, 339, 474, 1111
BspLI GGNNCC 8 cut(s) 24, 42, 57, 245, 255, 313, 729, 954
BspMI ACCTGC 1 cut(s) 784
BspOI GCTAGC 1 cut(s) 647
BspPI GGATC 5 cut(s) 63, 238, 251, 947, 960
BspT107I GGYRCC 1 cut(s) 253
BsrFI RCCGGY 1 cut(s) 46
BsrI ACTGG 4 cut(s) 247, 466, 634, 841
BssAI RCCGGY 1 cut(s) 46
BssECI CCNNGG 4 cut(s) 51, 298, 378, 762
BssMI GATC 4 cut(s) 68, 243, 264, 952
BssNI GRCGYC 3 cut(s) 5, 383, 483
BssT1I CCWWGG 1 cut(s) 762
Bst2UI CCWGG 1 cut(s) 624
Bst4CI ACNGT 2 cut(s) 907, 986
BstACI GRCGYC 3 cut(s) 5, 383, 483
BstBAI YACGTR 1 cut(s) 599
BstC8I GCNNGC 2 cut(s) 645, 1155
BstDEI CTNAG 5 cut(s) 65, 347, 461, 648, 1119
BstDSI CCRYGG 1 cut(s) 298
BstENI CCTNNNNNAGG 1 cut(s) 1187
BstF5I GGATG 3 cut(s) 427, 895, 1179
BstH2I RGCGCY 1 cut(s) 140
BstHHI GCGC 1 cut(s) 139
BstKTI GATC 4 cut(s) 71, 246, 267, 955
BstMAI GTCTC 1 cut(s) 134
BstMBI GATC 4 cut(s) 68, 243, 264, 952
BstMCI CGRYCG 1 cut(s) 224
BstMWI GCNNNNNNNGC 5 cut(s) 214, 223, 373, 389, 1012
BstNI CCWGG 1 cut(s) 624
BstNSI RCATGY 1 cut(s) 1157
BstSCI CCNGG 4 cut(s) 75, 360, 622, 970
BstSFI CTRYAG 2 cut(s) 121, 490
BstV1I GCAGC 4 cut(s) 126, 444, 661, 1102
BstX2I RGATCY 3 cut(s) 68, 243, 952
BstYI RGATCY 3 cut(s) 68, 243, 952
BsuRI GGCC 4 cut(s) 50, 80, 392, 1099
BtgI CCRYGG 1 cut(s) 298
BtgZI GCGATG 1 cut(s) 26
BtsCI GGATG 3 cut(s) 427, 895, 1179
BtsI GCAGTG 2 cut(s) 546, 1044
BtsIMutI CAGTG 3 cut(s) 546, 1044, 1117
BveI ACCTGC 1 cut(s) 784
Cac8I GCNNGC 2 cut(s) 645, 1155
CaiI CAGNNNCTG 1 cut(s) 277
CfoI GCGC 1 cut(s) 139
Cfr10I RCCGGY 1 cut(s) 46
Cfr13I GGNCC 4 cut(s) 22, 312, 617, 728
CseI GACGC 2 cut(s) 372, 956
Csp6I GTAC 3 cut(s) 178, 351, 715
CviAII CATG 3 cut(s) 563, 640, 1154
CviQI GTAC 3 cut(s) 178, 351, 715
DdeI CTNAG 5 cut(s) 65, 347, 461, 648, 1119
DpnI GATC 4 cut(s) 70, 245, 266, 954
DpnII GATC 4 cut(s) 68, 243, 264, 952
DraIII CACNNNGTG 1 cut(s) 602
EaeI YGGCCR 1 cut(s) 1097
Ecl136II GAGCTC 1 cut(s) 874
Eco130I CCWWGG 1 cut(s) 762
Eco24I GRGCYC 2 cut(s) 326, 876
Eco47I GGWCC 4 cut(s) 22, 312, 617, 728
Eco53kI GAGCTC 1 cut(s) 874
Eco57I CTGAAG 2 cut(s) 224, 392
Eco72I CACGTG 1 cut(s) 599
Eco88I CYCGRG 1 cut(s) 445
EcoICRI GAGCTC 1 cut(s) 874
EcoNI CCTNNNNNAGG 1 cut(s) 1187
EcoRII CCWGG 1 cut(s) 622
EcoT14I CCWWGG 1 cut(s) 762
EcoT22I ATGCAT 1 cut(s) 1155
EcoT38I GRGCYC 2 cut(s) 326, 876
ErhI CCWWGG 1 cut(s) 762
Esp3I CGTCTC 1 cut(s) 134
FaeI CATG 3 cut(s) 566, 643, 1157
FaqI GGGAC 1 cut(s) 954
FatI CATG 3 cut(s) 562, 639, 1153
FauI CCCGC 1 cut(s) 201
FblI GTMKAC 1 cut(s) 1074
Fnu4HI GCNGC 6 cut(s) 140, 257, 431, 458, 675, 1116
FokI GGATG 3 cut(s) 434, 902, 1166
FriOI GRGCYC 2 cut(s) 326, 876
Fsp4HI GCNGC 6 cut(s) 140, 257, 431, 458, 675, 1116
FspBI CTAG 1 cut(s) 644
GlaI GCGC 1 cut(s) 138
GluI GCNGC 6 cut(s) 140, 257, 431, 458, 675, 1116
GsuI CTGGAG 2 cut(s) 299, 858
HaeII RGCGCY 1 cut(s) 140
HaeIII GGCC 4 cut(s) 50, 80, 392, 1099
HapII CCGG 8 cut(s) 38, 47, 77, 220, 361, 434, 972, 1146
HgaI GACGC 2 cut(s) 372, 956
HhaI GCGC 1 cut(s) 139
Hin1I GRCGYC 3 cut(s) 5, 383, 483
Hin1II CATG 3 cut(s) 566, 643, 1157
Hin6I GCGC 1 cut(s) 137
HinP1I GCGC 1 cut(s) 137
HinfI GANTC 5 cut(s) 110, 199, 343, 443, 861
HpaII CCGG 8 cut(s) 38, 47, 77, 220, 361, 434, 972, 1146
HphI GGTGA 5 cut(s) 76, 247, 274, 478, 551
Hpy166II GTNNAC 4 cut(s) 289, 315, 731, 1075
Hpy188III TCNNGA 4 cut(s) 20, 278, 743, 1139
Hpy8I GTNNAC 4 cut(s) 289, 315, 731, 1075
Hpy99I CGWCG 3 cut(s) 107, 322, 388
HpyAV CCTTC 3 cut(s) 91, 688, 969
HpyCH4III ACNGT 2 cut(s) 907, 986
HpyCH4IV ACGT 3 cut(s) 180, 483, 598
HpyCH4V TGCA 7 cut(s) 142, 397, 773, 818, 959, 1044, 1153
HpyF10VI GCNNNNNNNGC 5 cut(s) 214, 223, 373, 389, 1012
HpyF3I CTNAG 5 cut(s) 65, 347, 461, 648, 1119
HpySE526I ACGT 3 cut(s) 180, 483, 598
Hsp92I GRCGYC 3 cut(s) 5, 383, 483
Hsp92II CATG 3 cut(s) 566, 643, 1157
HspAI GCGC 1 cut(s) 137
Kzo9I GATC 4 cut(s) 68, 243, 264, 952
LmnI GCTCC 6 cut(s) 40, 222, 364, 839, 871, 879
Lsp1109I GCAGC 4 cut(s) 126, 444, 661, 1102
LweI GCATC 4 cut(s) 204, 376, 793, 817
MaeI CTAG 1 cut(s) 644
MaeII ACGT 3 cut(s) 180, 483, 598
MaeIII GTNAC 1 cut(s) 484
MalI GATC 4 cut(s) 70, 245, 266, 954
MboI GATC 4 cut(s) 68, 243, 264, 952
MboII GAAGA 3 cut(s) 208, 1094, 1234
MflI RGATCY 3 cut(s) 68, 243, 952
MhlI GDGCHC 2 cut(s) 326, 876
MluCI AATT 3 cut(s) 328, 701, 995
MlyI GAGTC 2 cut(s) 104, 437
MmeI TCCRAC 4 cut(s) 96, 126, 138, 450
Mph1103I ATGCAT 1 cut(s) 1155
MroXI GAANNNNTTC 2 cut(s) 155, 705
MseI TTAA 2 cut(s) 357, 915
MslI CAYNNNNRTG 1 cut(s) 408
MspA1I CMGCKG 1 cut(s) 259
MspI CCGG 8 cut(s) 38, 47, 77, 220, 361, 434, 972, 1146
MspR9I CCNGG 4 cut(s) 77, 362, 624, 972
Mva1269I GAATGC 2 cut(s) 775, 1155
MvaI CCWGG 1 cut(s) 624
MwoI GCNNNNNNNGC 5 cut(s) 214, 223, 373, 389, 1012
NciI CCSGG 3 cut(s) 77, 362, 972
NdeII GATC 4 cut(s) 68, 243, 264, 952
NheI GCTAGC 1 cut(s) 643
NlaIII CATG 3 cut(s) 566, 643, 1157
NlaIV GGNNCC 8 cut(s) 24, 42, 57, 245, 255, 313, 729, 954
NmeAIII GCCGAG 2 cut(s) 359, 1075
NmuCI GTSAC 1 cut(s) 484
NsiI ATGCAT 1 cut(s) 1155
NspI RCATGY 1 cut(s) 1157
PaeI GCATGC 1 cut(s) 1157
PaeR7I CTCGAG 1 cut(s) 445
PaqCI CACCTGC 1 cut(s) 784
PcsI WCGNNNNNNNCGW 5 cut(s) 111, 159, 186, 323, 739
PctI GAATGC 2 cut(s) 775, 1155
PdmI GAANNNNTTC 2 cut(s) 155, 705
PfeI GAWTC 3 cut(s) 199, 343, 861
PfoI TCCNGGA 2 cut(s) 622, 970
PkrI GCNGC 6 cut(s) 141, 258, 432, 459, 676, 1117
PleI GAGTC 2 cut(s) 104, 437
PmaCI CACGTG 1 cut(s) 599
PmlI CACGTG 1 cut(s) 599
PpsI GAGTC 2 cut(s) 104, 437
Ppu21I YACGTR 1 cut(s) 599
Psp124BI GAGCTC 1 cut(s) 876
Psp6I CCWGG 1 cut(s) 622
PspCI CACGTG 1 cut(s) 599
PspGI CCWGG 1 cut(s) 622
PspN4I GGNNCC 8 cut(s) 24, 42, 57, 245, 255, 313, 729, 954
PspPI GGNCC 4 cut(s) 22, 312, 617, 728
PspXI VCTCGAGB 1 cut(s) 445
PstNI CAGNNNCTG 1 cut(s) 277
PsuI RGATCY 3 cut(s) 68, 243, 952
RsaI GTAC 3 cut(s) 179, 352, 716
RsaNI GTAC 3 cut(s) 178, 351, 715
RseI CAYNNNNRTG 1 cut(s) 408
SacI GAGCTC 1 cut(s) 876
SaqAI TTAA 2 cut(s) 357, 915
SatI GCNGC 6 cut(s) 140, 257, 431, 458, 675, 1116
Sau3AI GATC 4 cut(s) 68, 243, 264, 952
Sau96I GGNCC 4 cut(s) 22, 312, 617, 728
ScaI AGTACT 1 cut(s) 716
SchI GAGTC 2 cut(s) 104, 437
ScrFI CCNGG 4 cut(s) 77, 362, 624, 972
SduI GDGCHC 2 cut(s) 326, 876
SfaNI GCATC 4 cut(s) 204, 376, 793, 817
SfcI CTRYAG 2 cut(s) 121, 490
Sfr274I CTCGAG 1 cut(s) 445
SinI GGWCC 4 cut(s) 22, 312, 617, 728
SlaI CTCGAG 1 cut(s) 445
SmiMI CAYNNNNRTG 1 cut(s) 408
SmlI CTYRAG 3 cut(s) 131, 445, 1060
SmoI CTYRAG 3 cut(s) 131, 445, 1060
SphI GCATGC 1 cut(s) 1157
Sse9I AATT 3 cut(s) 328, 701, 995
SsiI CCGC 7 cut(s) 208, 241, 257, 400, 431, 440, 1162
SspMI CTAG 1 cut(s) 644
SstI GAGCTC 1 cut(s) 876
StyD4I CCNGG 4 cut(s) 75, 360, 622, 970
StyI CCWWGG 1 cut(s) 762
TaaI ACNGT 2 cut(s) 907, 986
TaiI ACGT 3 cut(s) 183, 486, 601
TaqI TCGA 3 cut(s) 162, 326, 446
TaqII GACCGA 1 cut(s) 257
TasI AATT 3 cut(s) 328, 701, 995
TatI WGTACW 1 cut(s) 714
TauI GCSGC 2 cut(s) 259, 433
TfiI GAWTC 3 cut(s) 199, 343, 861
Tru1I TTAA 2 cut(s) 357, 915
Tru9I TTAA 2 cut(s) 357, 915
TscAI CASTG 3 cut(s) 546, 1051, 1117
TseFI GTSAC 1 cut(s) 484
TseI GCWGC 4 cut(s) 139, 457, 674, 1115
Tsp45I GTSAC 1 cut(s) 484
TspDTI ATGAA 3 cut(s) 148, 670, 1070
TspGWI ACGGA 2 cut(s) 521, 743
TspRI CASTG 3 cut(s) 546, 1051, 1117
VpaK11BI GGWCC 4 cut(s) 22, 312, 617, 728
XagI CCTNNNNNAGG 1 cut(s) 1187
XapI RAATTY 2 cut(s) 701, 995
XceI RCATGY 1 cut(s) 1157
XcmI CCANNNNNNNNNTGG 1 cut(s) 415
XhoI CTCGAG 1 cut(s) 445
XmiI GTMKAC 1 cut(s) 1074
XmnI GAANNNNTTC 2 cut(s) 155, 705
XspI CTAG 1 cut(s) 644
ZraI GACGTC 1 cut(s) 484
ZrmI AGTACT 1 cut(s) 716
Zsp2I ATGCAT 1 cut(s) 1155
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.