Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp06

Orthogroup ID

OG0002106

Physical Location & Seq

Genomic Coordinates Forward (+)

2959742 .. 2964249

Gene Structure 4508 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.6G039300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1263 bp

ATGGCAGGCTCCGCCATGGTGTTGGACCCGAAACCCTTACCGGAGCCACCAGCTTCGTTCCCCTCCATTAGATCGGACCTCCAGGCTTCGTCGGAGCAGCACCAGGCCTCCGACGAGGACGATCTCTACAGCCGCCTCAAATCCCTTCAGCGGCAACTCGAGTTCATCGACATCCAGGAGGAGTATGTCAAGGACGAGCAGAAGAACCTGAAGCGCGAGCTCCTTCGTGCCCAAGAAGAGGTCAAGAGGATCCAGTCGGTGCCTCTTGTCATCGGCCAGTTTATGGAGATGGTCGATCAGAACAATGGGATTGTGGGCTCCACTACGGGCTCCAATTACTATGTTAGGATTCTCAGCACCATTAATCGGGAGCTTCTCAAGCCTTCTGCTTCGGTCGCCTTGCATCGCCACTCCAATGCCCTTGTCGACGTTCTGCCTCCGGAGGCCGACTCCAGCATTTCGCTCCTCAGCCAGTCTGAGAAGCCCGACGTCACTTATTCTGATATTGGAGGATGCGATATTCAGAAGCAAGAAATCCGTGAAGCAGTAGAACTGCCACTTACTCACCATGAGTTATACAAACAGATTGGAATAGACCCGCCACGTGGTGTGTTGCTCTATGGTCCACCTGGAACTGGTAAAACCATGTTAGCAAAGGCTGTTGCTAATCATACAACTGCTGCCTTCATTAGAGTTGTTGGTTCAGAATTTGTTCAGAAGTATTTGGGTGAGGGTCCACGAATGGTTCGTGATGTTTTCCGTCTGGCCAAGGAGAATGCACCTGCAATCATTTTTATTGACGAGGTGGATGCTATTGCTACTGCTAGGTTTGATGCTCAAACTGGAGCTGACAGAGAAGTACAGAGAATCCTTATGGAGCTCCTCAATCAGATGGATGGTTTCGACCAGACAGTAAATGTTAAGGTCATAATGGCAACTAATCGAGCAGACACATTGGATCCTGCACTTCTGCGTCCTGGAAGGCTTGATCGGAAGATTGAATTTCCTTTGCCTGATAGGAGGCAGAAAAGACTTGTTTTTCAGGTTTGCACTGCTAAAATGAACCTGGGTGATGAAGTGGACTTGGAAGATTATGTCTCTCGGCCAGATAAAATCAGTGCTGCTGAGATTTCAGCTATATGTCAAGAAGCAGGAATGCATGCAGTTCGCAAGAACCGGTATGTCATACTCCCGAAGGACTTTGAGAAGGGTTACCAAATCAATGTGAAGAAGCCCGACACTGACTTTGAATTCTACAAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000502 GO:0003674 GO:0003824 GO:0005488 GO:0005515 GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0005911 GO:0006355 GO:0006357 GO:0006508 GO:0006511 GO:0006807 GO:0006950 GO:0008134 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009506 GO:0009889 GO:0009891 GO:0009893 GO:0009894 GO:0009896 GO:0009987 GO:0010033 GO:0010243 GO:0010468 GO:0010498 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0016020 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017025 GO:0017111 GO:0019219 GO:0019222 GO:0019538 GO:0019941 GO:0030054 GO:0030162 GO:0030163 GO:0030312 GO:0030433 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031329 GO:0031331 GO:0031334 GO:0031595 GO:0031597 GO:0031974 GO:0031981 GO:0032268 GO:0032270 GO:0032991 GO:0033554 GO:0034976 GO:0036402 GO:0036503 GO:0042176 GO:0042221 GO:0042623 GO:0043161 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043254 GO:0043632 GO:0044087 GO:0044089 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044445 GO:0044446 GO:0044464 GO:0045732 GO:0045862 GO:0045893 GO:0045898 GO:0045899 GO:0045935 GO:0045944 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0050896 GO:0051128 GO:0051130 GO:0051171 GO:0051173 GO:0051246 GO:0051247 GO:0051252 GO:0051254 GO:0051603 GO:0051716 GO:0055044 GO:0060255 GO:0060260 GO:0060261 GO:0061136 GO:0065007 GO:0070013 GO:0071704 GO:0071944 GO:0080090 GO:1901564 GO:1901565 GO:1901575 GO:1901698 GO:1901800 GO:1902494 GO:1902680 GO:1903050 GO:1903052 GO:1903362 GO:1903364 GO:1903506 GO:1903508 GO:1905368 GO:1905369 GO:2000112 GO:2000142 GO:2000144 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko03050 ko05169 map03050 map05169

Pfam Domains

Protein Families

AAA

Protein Analysis

421

Amino Acids

47.18

Weight (kDa)

5.4

Isoelectric Point (pI)

38.49

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002106)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G58290
fragaria_vesca	FvH4_3g40850 FvH4_7g03250
malus_domestica	MD03G1049000.v1.1 MD05G1031100.v1.1 MD11G1051500.v1.1
prunus_persica	Prupe.6G039300_v2.0.a1
pyrus_communis	pycom03g03850 pycom05g02220 pycom11g04130
rosa_chinensis	RchiOBHm_Chr1g0325371 RchiOBHm_Chr5g0027211 RchiOBHm_Chr5g0034141 RchiOBHm_Chr5g0039711 RchiOBHm_Chr5g0073581 RchiOBHm_Chr5g0076731 RchiOBHm_Chr6g0247571
rosa_laevigata	RLG00000009222 RLG00000030144 RLG00000036397
rosa_multiflora	Rmu_co8132346.1_g000001 Rmu_sc0000103.1_g000009 Rmu_sc0020800.1_g000001 Rmu_ssc0000128.1_g000023
rosa_roxburghii	Rroxscaffold_1G00007690 Rroxscaffold_4G00306620 Rroxscaffold_4G00324790
rosa_rugosa	Rorug01G0051600 Rorug05G0425000.1
rosa_samantha	Rh1AG066600 Rh1BG054900 Rh1CG068200 Rh5AG235600 Rh5AG482100 Rh5BG502800 Rh5CG525900 Rh5DG515100 Rh6CG194700 Rh7CG418800
rosa_wichuraiana	Rw0G021430 Rw1G005570 Rw5G021370 Rw5G025060 Rw5G044790

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	790
AatII	GACGTC	1 cut(s)	492
Acc36I	ACCTGC	1 cut(s)	790
AccB1I	GGYRCC	1 cut(s)	259
AccB7I	CCANNNNNTGG	1 cut(s)	283
AccI	GTMKAC	1 cut(s)	426
AccII	CGCG	1 cut(s)	216
AccIII	TCCGGA	1 cut(s)	439
AciI	CCGC	4 cut(s)	12, 133, 151, 599
AclWI	GGATC	4 cut(s)	244, 257, 953, 966
AcoI	YGGCCR	3 cut(s)	274, 765, 1103
AcsI	RAATTY	3 cut(s)	707, 1001, 1250
AcuI	CTGAAG	2 cut(s)	131, 230
AcvI	CACGTG	1 cut(s)	605
AcyI	GRCGYC	1 cut(s)	489
AdeI	CACNNNGTG	1 cut(s)	608
AfaI	GTAC	1 cut(s)	861
AfiI	CCNNNNNNNGG	6 cut(s)	150, 238, 283, 366, 605, 635
AgeI	ACCGGT	1 cut(s)	1176
AgsI	TTSAA	2 cut(s)	1001, 1250
AjnI	CCWGG	6 cut(s)	81, 102, 174, 628, 976, 1065
AluBI	AGCT	6 cut(s)	53, 220, 373, 848, 880, 1136
AluI	AGCT	6 cut(s)	53, 220, 373, 848, 880, 1136
Alw21I	GWGCWC	2 cut(s)	222, 882
Alw26I	GTCTC	1 cut(s)	1102
AlwI	GGATC	4 cut(s)	244, 257, 953, 966
Ama87I	CYCGRG	1 cut(s)	158
Aor13HI	TCCGGA	1 cut(s)	439
AoxI	GGCC	5 cut(s)	105, 274, 444, 765, 1103
ApeKI	GCWGC	3 cut(s)	97, 680, 1121
ApoI	RAATTY	3 cut(s)	707, 1001, 1250
ArsI	GACNNNNNNTTYG	2 cut(s)	1229, 1261
AseI	ATTAAT	1 cut(s)	363
AsiGI	ACCGGT	1 cut(s)	1176
Asp700I	GAANNNNTTC	1 cut(s)	711
AspLEI	GCGC	1 cut(s)	216
AspS9I	GGNCC	4 cut(s)	25, 76, 623, 734
AsuHPI	GGTGA	3 cut(s)	557, 740, 1082
AvaI	CYCGRG	1 cut(s)	158
AvaII	GGWCC	4 cut(s)	25, 76, 623, 734
BaeGI	GKGCMC	1 cut(s)	232
BalI	TGGCCA	1 cut(s)	767
BamHI	GGATCC	2 cut(s)	249, 958
BanI	GGYRCC	1 cut(s)	259
BanII	GRGCYC	4 cut(s)	222, 320, 332, 882
BbrPI	CACGTG	1 cut(s)	605
Bbv12I	GWGCWC	2 cut(s)	222, 882
BbvCI	CCTCAGC	1 cut(s)	467
BbvI	GCAGC	3 cut(s)	109, 667, 1108
BccI	CCATC	3 cut(s)	283, 886, 890
BcgI	CGANNNNNNTGC	4 cut(s)	791, 825, 1148, 1182
BciT130I	CCWGG	6 cut(s)	83, 104, 176, 630, 978, 1067
BcoDI	GTCTC	1 cut(s)	1102
BfaI	CTAG	1 cut(s)	825
BfmI	CTRYAG	1 cut(s)	127
BfuAI	ACCTGC	1 cut(s)	790
BisI	GCNGC	5 cut(s)	98, 133, 152, 681, 1122
BlsI	GCNGC	5 cut(s)	99, 134, 153, 682, 1123
Bme1390I	CCNGG	6 cut(s)	83, 104, 176, 630, 978, 1067
Bme18I	GGWCC	4 cut(s)	25, 76, 623, 734
BmeT110I	CYCGRG	1 cut(s)	158
BmgT120I	GGNCC	4 cut(s)	25, 76, 623, 734
BmiI	GGNNCC	9 cut(s)	10, 27, 45, 251, 261, 319, 331, 735, 960
BmrFI	CCNGG	6 cut(s)	83, 104, 176, 630, 978, 1067
BmsI	GCATC	4 cut(s)	412, 503, 799, 823
BplI	GAGNNNNNCTC	2 cut(s)	434, 466
BpmI	CTGGAG	3 cut(s)	65, 436, 864
Bpu10I	CCTNAGC	1 cut(s)	467
BpuEI	CTTGAG	1 cut(s)	362
BsaAI	YACGTR	1 cut(s)	605
BsaHI	GRCGYC	1 cut(s)	489
BsaJI	CCNNGG	3 cut(s)	15, 768, 1066
BsaWI	WCCGGW	3 cut(s)	40, 439, 1176
BsaXI	ACNNNNNCTCC	2 cut(s)	92, 122
Bsc4I	CCNNNNNNNGG	6 cut(s)	150, 238, 283, 366, 605, 635
Bse118I	RCCGGY	1 cut(s)	1176
Bse1I	ACTGG	5 cut(s)	253, 277, 472, 640, 847
BseAI	TCCGGA	1 cut(s)	439
BseBI	CCWGG	6 cut(s)	83, 104, 176, 630, 978, 1067
BseDI	CCNNGG	3 cut(s)	15, 768, 1066
BseGI	GGATG	4 cut(s)	171, 518, 814, 901
BseLI	CCNNNNNNNGG	6 cut(s)	150, 238, 283, 366, 605, 635
BseMII	CTCAG	4 cut(s)	367, 468, 481, 1116
BseNI	ACTGG	5 cut(s)	253, 277, 472, 640, 847
BseRI	GAGGAG	3 cut(s)	194, 455, 872
BseSI	GKGCMC	1 cut(s)	232
BseXI	GCAGC	3 cut(s)	109, 667, 1108
BsgI	GTGCAG	1 cut(s)	948
Bsh1236I	CGCG	1 cut(s)	216
Bsh1285I	CGRYCG	1 cut(s)	396
BshFI	GGCC	5 cut(s)	107, 276, 446, 767, 1105
BshNI	GGYRCC	1 cut(s)	259
BshTI	ACCGGT	1 cut(s)	1176
BsiEI	CGRYCG	1 cut(s)	396
BsiHKAI	GWGCWC	2 cut(s)	222, 882
BsiHKCI	CYCGRG	1 cut(s)	158
BsiSI	CCGG	3 cut(s)	41, 440, 1177
BslI	CCNNNNNNNGG	6 cut(s)	150, 238, 283, 366, 605, 635
BsmAI	GTCTC	1 cut(s)	1102
BsmI	GAATGC	2 cut(s)	781, 1161
BsnI	GGCC	5 cut(s)	107, 276, 446, 767, 1105
BsoBI	CYCGRG	1 cut(s)	158
Bsp1286I	GDGCHC	5 cut(s)	222, 232, 320, 332, 882
Bsp13I	TCCGGA	1 cut(s)	439
Bsp143I	GATC	6 cut(s)	71, 121, 249, 295, 958, 988
Bsp19I	CCATGG	1 cut(s)	15
BspACI	CCGC	4 cut(s)	12, 133, 151, 599
BspANI	GGCC	5 cut(s)	107, 276, 446, 767, 1105
BspCNI	CTCAG	4 cut(s)	366, 469, 480, 1117
BspEI	TCCGGA	1 cut(s)	439
BspFNI	CGCG	1 cut(s)	216
BspLI	GGNNCC	9 cut(s)	10, 27, 45, 251, 261, 319, 331, 735, 960
BspMI	ACCTGC	1 cut(s)	790
BspPI	GGATC	4 cut(s)	244, 257, 953, 966
BspT107I	GGYRCC	1 cut(s)	259
BsrFI	RCCGGY	1 cut(s)	1176
BsrI	ACTGG	5 cut(s)	253, 277, 472, 640, 847
BssAI	RCCGGY	1 cut(s)	1176
BssECI	CCNNGG	3 cut(s)	15, 768, 1066
BssMI	GATC	6 cut(s)	71, 121, 249, 295, 958, 988
BssNI	GRCGYC	1 cut(s)	489
BssT1I	CCWWGG	2 cut(s)	15, 768
Bst2UI	CCWGG	6 cut(s)	83, 104, 176, 630, 978, 1067
Bst4CI	ACNGT	1 cut(s)	913
Bst6I	CTCTTC	1 cut(s)	231
BstACI	GRCGYC	1 cut(s)	489
BstBAI	YACGTR	1 cut(s)	605
BstC8I	GCNNGC	3 cut(s)	7, 218, 1161
BstDEI	CTNAG	4 cut(s)	353, 467, 477, 1125
BstDSI	CCRYGG	1 cut(s)	15
BstEII	GGTNACC	1 cut(s)	1211
BstF5I	GGATG	4 cut(s)	171, 518, 814, 901
BstFNI	CGCG	1 cut(s)	216
BstHHI	GCGC	1 cut(s)	216
BstKTI	GATC	6 cut(s)	74, 124, 252, 298, 961, 991
BstMAI	GTCTC	1 cut(s)	1102
BstMBI	GATC	6 cut(s)	71, 121, 249, 295, 958, 988
BstMCI	CGRYCG	1 cut(s)	396
BstMWI	GCNNNNNNNGC	3 cut(s)	11, 379, 395
BstNI	CCWGG	6 cut(s)	83, 104, 176, 630, 978, 1067
BstNSI	RCATGY	1 cut(s)	1163
BstPI	GGTNACC	1 cut(s)	1211
BstSCI	CCNGG	6 cut(s)	81, 102, 174, 628, 976, 1065
BstSFI	CTRYAG	1 cut(s)	127
BstSLI	GKGCMC	1 cut(s)	232
BstUI	CGCG	1 cut(s)	216
BstV1I	GCAGC	3 cut(s)	109, 667, 1108
BstX2I	RGATCY	2 cut(s)	249, 958
BstXI	CCANNNNNNTGG	1 cut(s)	22
BstYI	RGATCY	2 cut(s)	249, 958
BsuRI	GGCC	5 cut(s)	107, 276, 446, 767, 1105
BtgI	CCRYGG	1 cut(s)	15
BtgZI	GCGATG	1 cut(s)	389
BtsCI	GGATG	4 cut(s)	171, 518, 814, 901
BtsI	GCAGTG	1 cut(s)	1050
BtsIMutI	CAGTG	3 cut(s)	1050, 1123, 1239
BveI	ACCTGC	1 cut(s)	790
Cac8I	GCNNGC	3 cut(s)	7, 218, 1161
CfoI	GCGC	1 cut(s)	216
Cfr10I	RCCGGY	1 cut(s)	1176
Cfr13I	GGNCC	4 cut(s)	25, 76, 623, 734
CseI	GACGC	1 cut(s)	962
Csp6I	GTAC	1 cut(s)	860
CspAI	ACCGGT	1 cut(s)	1176
CviAII	CATG	4 cut(s)	16, 569, 646, 1160
CviQI	GTAC	1 cut(s)	860
DdeI	CTNAG	4 cut(s)	353, 467, 477, 1125
DpnI	GATC	6 cut(s)	73, 123, 251, 297, 960, 990
DpnII	GATC	6 cut(s)	71, 121, 249, 295, 958, 988
DraIII	CACNNNGTG	1 cut(s)	608
EaeI	YGGCCR	3 cut(s)	274, 765, 1103
Eam1104I	CTCTTC	1 cut(s)	231
EarI	CTCTTC	1 cut(s)	231
Ecl136II	GAGCTC	2 cut(s)	220, 880
Eco130I	CCWWGG	2 cut(s)	15, 768
Eco147I	AGGCCT	1 cut(s)	107
Eco24I	GRGCYC	4 cut(s)	222, 320, 332, 882
Eco47I	GGWCC	4 cut(s)	25, 76, 623, 734
Eco53kI	GAGCTC	2 cut(s)	220, 880
Eco57I	CTGAAG	2 cut(s)	131, 230
Eco72I	CACGTG	1 cut(s)	605
Eco88I	CYCGRG	1 cut(s)	158
Eco91I	GGTNACC	1 cut(s)	1211
EcoICRI	GAGCTC	2 cut(s)	220, 880
EcoO65I	GGTNACC	1 cut(s)	1211
EcoRI	GAATTC	1 cut(s)	1250
EcoRII	CCWGG	6 cut(s)	81, 102, 174, 628, 976, 1065
EcoT14I	CCWWGG	2 cut(s)	15, 768
EcoT22I	ATGCAT	1 cut(s)	1161
EcoT38I	GRGCYC	4 cut(s)	222, 320, 332, 882
ErhI	CCWWGG	2 cut(s)	15, 768
FaeI	CATG	4 cut(s)	19, 572, 649, 1163
FatI	CATG	4 cut(s)	15, 568, 645, 1159
FauI	CCCGC	1 cut(s)	606
FblI	GTMKAC	1 cut(s)	426
Fnu4HI	GCNGC	5 cut(s)	98, 133, 152, 681, 1122
FokI	GGATG	4 cut(s)	158, 525, 821, 908
FriOI	GRGCYC	4 cut(s)	222, 320, 332, 882
Fsp4HI	GCNGC	5 cut(s)	98, 133, 152, 681, 1122
FspBI	CTAG	1 cut(s)	825
GlaI	GCGC	1 cut(s)	215
GluI	GCNGC	5 cut(s)	98, 133, 152, 681, 1122
GsuI	CTGGAG	3 cut(s)	65, 436, 864
HaeIII	GGCC	5 cut(s)	107, 276, 446, 767, 1105
HapII	CCGG	3 cut(s)	41, 440, 1177
HgaI	GACGC	1 cut(s)	962
HhaI	GCGC	1 cut(s)	216
Hin1I	GRCGYC	1 cut(s)	489
Hin1II	CATG	4 cut(s)	19, 572, 649, 1163
Hin6I	GCGC	1 cut(s)	214
HinP1I	GCGC	1 cut(s)	214
HincII	GTYRAC	1 cut(s)	427
HindII	GTYRAC	1 cut(s)	427
HinfI	GANTC	3 cut(s)	349, 449, 867
HpaII	CCGG	3 cut(s)	41, 440, 1177
HphI	GGTGA	3 cut(s)	557, 740, 1082
Hpy166II	GTNNAC	4 cut(s)	427, 626, 737, 1081
Hpy188III	TCNNGA	6 cut(s)	244, 368, 440, 749, 1145, 1192
Hpy8I	GTNNAC	4 cut(s)	427, 626, 737, 1081
Hpy99I	CGWCG	4 cut(s)	94, 116, 431, 491
HpyAV	CCTTC	7 cut(s)	155, 233, 393, 694, 975, 1189, 1201
HpyCH4III	ACNGT	1 cut(s)	913
HpyCH4IV	ACGT	3 cut(s)	429, 489, 604
HpyCH4V	TGCA	7 cut(s)	403, 779, 785, 965, 1050, 1159, 1163
HpyF10VI	GCNNNNNNNGC	3 cut(s)	11, 379, 395
HpyF3I	CTNAG	4 cut(s)	353, 467, 477, 1125
HpySE526I	ACGT	3 cut(s)	429, 489, 604
Hsp92I	GRCGYC	1 cut(s)	489
Hsp92II	CATG	4 cut(s)	19, 572, 649, 1163
HspAI	GCGC	1 cut(s)	214
Kpn2I	TCCGGA	1 cut(s)	439
Kzo9I	GATC	6 cut(s)	71, 121, 249, 295, 958, 988
Lsp1109I	GCAGC	3 cut(s)	109, 667, 1108
LweI	GCATC	4 cut(s)	412, 503, 799, 823
MaeI	CTAG	1 cut(s)	825
MaeII	ACGT	3 cut(s)	429, 489, 604
MaeIII	GTNAC	2 cut(s)	490, 1211
MalI	GATC	6 cut(s)	73, 123, 251, 297, 960, 990
MboI	GATC	6 cut(s)	71, 121, 249, 295, 958, 988
MboII	GAAGA	5 cut(s)	214, 248, 1006, 1100, 1240
MflI	RGATCY	2 cut(s)	249, 958
MhlI	GDGCHC	5 cut(s)	222, 232, 320, 332, 882
MlsI	TGGCCA	1 cut(s)	767
MluCI	AATT	4 cut(s)	334, 707, 1001, 1250
MluNI	TGGCCA	1 cut(s)	767
MlyI	GAGTC	1 cut(s)	443
MmeI	TCCRAC	2 cut(s)	72, 135
Mox20I	TGGCCA	1 cut(s)	767
Mph1103I	ATGCAT	1 cut(s)	1161
MroI	TCCGGA	1 cut(s)	439
MroXI	GAANNNNTTC	1 cut(s)	711
MscI	TGGCCA	1 cut(s)	767
MseI	TTAA	2 cut(s)	363, 921
MslI	CAYNNNNRTG	1 cut(s)	414
Msp20I	TGGCCA	1 cut(s)	767
MspA1I	CMGCKG	1 cut(s)	151
MspI	CCGG	3 cut(s)	41, 440, 1177
MspR9I	CCNGG	6 cut(s)	83, 104, 176, 630, 978, 1067
Mva1269I	GAATGC	2 cut(s)	781, 1161
MvaI	CCWGG	6 cut(s)	83, 104, 176, 630, 978, 1067
MvnI	CGCG	1 cut(s)	216
MwoI	GCNNNNNNNGC	3 cut(s)	11, 379, 395
NcoI	CCATGG	1 cut(s)	15
NdeII	GATC	6 cut(s)	71, 121, 249, 295, 958, 988
NlaIII	CATG	4 cut(s)	19, 572, 649, 1163
NlaIV	GGNNCC	9 cut(s)	10, 27, 45, 251, 261, 319, 331, 735, 960
NmeAIII	GCCGAG	1 cut(s)	1081
NmuCI	GTSAC	1 cut(s)	490
NsiI	ATGCAT	1 cut(s)	1161
NspI	RCATGY	1 cut(s)	1163
PaeI	GCATGC	1 cut(s)	1163
PaeR7I	CTCGAG	1 cut(s)	158
PaqCI	CACCTGC	1 cut(s)	790
PceI	AGGCCT	1 cut(s)	107
PcsI	WCGNNNNNNNCGW	2 cut(s)	165, 745
PctI	GAATGC	2 cut(s)	781, 1161
PdmI	GAANNNNTTC	1 cut(s)	711
PfeI	GAWTC	2 cut(s)	349, 867
PflMI	CCANNNNNTGG	1 cut(s)	283
PfoI	TCCNGGA	2 cut(s)	174, 976
PinAI	ACCGGT	1 cut(s)	1176
PkrI	GCNGC	5 cut(s)	99, 134, 153, 682, 1123
PleI	GAGTC	1 cut(s)	443
PmaCI	CACGTG	1 cut(s)	605
PmlI	CACGTG	1 cut(s)	605
PpsI	GAGTC	1 cut(s)	443
Ppu21I	YACGTR	1 cut(s)	605
PshBI	ATTAAT	1 cut(s)	363
Psp124BI	GAGCTC	2 cut(s)	222, 882
Psp6I	CCWGG	6 cut(s)	81, 102, 174, 628, 976, 1065
PspCI	CACGTG	1 cut(s)	605
PspEI	GGTNACC	1 cut(s)	1211
PspGI	CCWGG	6 cut(s)	81, 102, 174, 628, 976, 1065
PspN4I	GGNNCC	9 cut(s)	10, 27, 45, 251, 261, 319, 331, 735, 960
PspPI	GGNCC	4 cut(s)	25, 76, 623, 734
PspXI	VCTCGAGB	1 cut(s)	158
PsuI	RGATCY	2 cut(s)	249, 958
RsaI	GTAC	1 cut(s)	861
RsaNI	GTAC	1 cut(s)	860
RseI	CAYNNNNRTG	1 cut(s)	414
SacI	GAGCTC	2 cut(s)	222, 882
SalI	GTCGAC	1 cut(s)	425
SaqAI	TTAA	2 cut(s)	363, 921
SatI	GCNGC	5 cut(s)	98, 133, 152, 681, 1122
Sau3AI	GATC	6 cut(s)	71, 121, 249, 295, 958, 988
Sau96I	GGNCC	4 cut(s)	25, 76, 623, 734
SchI	GAGTC	1 cut(s)	443
ScrFI	CCNGG	6 cut(s)	83, 104, 176, 630, 978, 1067
SduI	GDGCHC	5 cut(s)	222, 232, 320, 332, 882
SfaNI	GCATC	4 cut(s)	412, 503, 799, 823
SfcI	CTRYAG	1 cut(s)	127
Sfr274I	CTCGAG	1 cut(s)	158
SinI	GGWCC	4 cut(s)	25, 76, 623, 734
SlaI	CTCGAG	1 cut(s)	158
SmiMI	CAYNNNNRTG	1 cut(s)	414
SmlI	CTYRAG	2 cut(s)	158, 377
SmoI	CTYRAG	2 cut(s)	158, 377
SphI	GCATGC	1 cut(s)	1163
Sse9I	AATT	4 cut(s)	334, 707, 1001, 1250
SseBI	AGGCCT	1 cut(s)	107
SsiI	CCGC	4 cut(s)	12, 133, 151, 599
SspMI	CTAG	1 cut(s)	825
SstI	GAGCTC	2 cut(s)	222, 882
StuI	AGGCCT	1 cut(s)	107
StyD4I	CCNGG	6 cut(s)	81, 102, 174, 628, 976, 1065
StyI	CCWWGG	2 cut(s)	15, 768
TaaI	ACNGT	1 cut(s)	913
TaiI	ACGT	3 cut(s)	432, 492, 607
TaqI	TCGA	6 cut(s)	159, 168, 294, 426, 903, 943
TaqII	GACCGA	1 cut(s)	382
TasI	AATT	4 cut(s)	334, 707, 1001, 1250
TatI	WGTACW	1 cut(s)	859
TauI	GCSGC	2 cut(s)	135, 154
TfiI	GAWTC	2 cut(s)	349, 867
Tru1I	TTAA	2 cut(s)	363, 921
Tru9I	TTAA	2 cut(s)	363, 921
TscAI	CASTG	3 cut(s)	1057, 1123, 1246
TseFI	GTSAC	1 cut(s)	490
TseI	GCWGC	3 cut(s)	97, 680, 1121
Tsp45I	GTSAC	1 cut(s)	490
TspDTI	ATGAA	4 cut(s)	154, 676, 1076, 1089
TspGWI	ACGGA	2 cut(s)	527, 749
TspRI	CASTG	3 cut(s)	1057, 1123, 1246
Van91I	CCANNNNNTGG	1 cut(s)	283
VpaK11BI	GGWCC	4 cut(s)	25, 76, 623, 734
VspI	ATTAAT	1 cut(s)	363
XapI	RAATTY	3 cut(s)	707, 1001, 1250
XceI	RCATGY	1 cut(s)	1163
XhoI	CTCGAG	1 cut(s)	158
XmiI	GTMKAC	1 cut(s)	426
XmnI	GAANNNNTTC	1 cut(s)	711
XspI	CTAG	1 cut(s)	825
ZraI	GACGTC	1 cut(s)	490
Zsp2I	ATGCAT	1 cut(s)	1161

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.