ubiquitin-protein transferase activity
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_3g45020 FvH4_3g45040 FvH4_3g45051 FvH4_3g45051 FvH4_4g04731 FvH4_4g08081 FvH4_5g09850 FvH4_5g09850 FvH4_5g09850 FvH4_5g09850 FvH4_5g09850 FvH4_5g09850 |
| rosa_chinensis | RchiOBHm_Chr1g0327511 RchiOBHm_Chr2g0145621 RchiOBHm_Chr5g0082901 |
| rosa_laevigata | RLG00000025408 |
| rosa_multiflora | Rmu_sc0004031.1_g000014 Rmu_sc0007172.1_g000007 |
| rosa_roxburghii | Rroxscaffold_1G00001500 Rroxscaffold_2G00154430 Rroxscaffold_6G00424730 |
| rosa_rugosa | Rorug05G0480700 Rorug05G0480800 Rorug05G0480900 Rorug05G0481200 Rorug05G0481300 Rorug05G0481400 Rorug05G0481500 |
| rosa_samantha | Rh5BG558000 Rh5DG566600 |
| rosa_wichuraiana | Rw5G049760 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcoI | YGGCCR | 1 cut(s) | 339 |
| AdeI | CACNNNGTG | 1 cut(s) | 50 |
| AfaI | GTAC | 1 cut(s) | 92 |
| AflII | CTTAAG | 1 cut(s) | 73 |
| AgsI | TTSAA | 4 cut(s) | 10, 85, 221, 299 |
| AjnI | CCWGG | 3 cut(s) | 265, 288, 310 |
| Alw21I | GWGCWC | 1 cut(s) | 55 |
| Alw26I | GTCTC | 2 cut(s) | 178, 409 |
| AoxI | GGCC | 3 cut(s) | 303, 317, 339 |
| AspS9I | GGNCC | 1 cut(s) | 166 |
| AsuHPI | GGTGA | 2 cut(s) | 161, 389 |
| AvaII | GGWCC | 1 cut(s) | 166 |
| Bbv12I | GWGCWC | 1 cut(s) | 55 |
| BccI | CCATC | 2 cut(s) | 74, 408 |
| BceAI | ACGGC | 2 cut(s) | 326, 436 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 352, 386 |
| BciT130I | CCWGG | 3 cut(s) | 267, 290, 312 |
| BcoDI | GTCTC | 2 cut(s) | 178, 409 |
| BfrI | CTTAAG | 1 cut(s) | 73 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 316 |
| Bme1390I | CCNGG | 3 cut(s) | 267, 290, 312 |
| Bme18I | GGWCC | 1 cut(s) | 166 |
| BmgT120I | GGNCC | 1 cut(s) | 166 |
| BmiI | GGNNCC | 1 cut(s) | 168 |
| BmrFI | CCNGG | 3 cut(s) | 267, 290, 312 |
| BmsI | GCATC | 1 cut(s) | 169 |
| BsaBI | GATNNNNATC | 1 cut(s) | 65 |
| BsaJI | CCNNGG | 1 cut(s) | 237 |
| Bse1I | ACTGG | 1 cut(s) | 88 |
| Bse8I | GATNNNNATC | 1 cut(s) | 65 |
| BseBI | CCWGG | 3 cut(s) | 267, 290, 312 |
| BseDI | CCNNGG | 1 cut(s) | 237 |
| BseGI | GGATG | 1 cut(s) | 66 |
| BseJI | GATNNNNATC | 1 cut(s) | 65 |
| BseMII | CTCAG | 1 cut(s) | 189 |
| BseNI | ACTGG | 1 cut(s) | 88 |
| BshFI | GGCC | 3 cut(s) | 305, 319, 341 |
| BsiHKAI | GWGCWC | 1 cut(s) | 55 |
| BslFI | GGGAC | 1 cut(s) | 152 |
| BsmAI | GTCTC | 2 cut(s) | 178, 409 |
| BsmFI | GGGAC | 1 cut(s) | 152 |
| BsnI | GGCC | 3 cut(s) | 305, 319, 341 |
| Bsp1286I | GDGCHC | 1 cut(s) | 55 |
| Bsp19I | CCATGG | 1 cut(s) | 237 |
| BspANI | GGCC | 3 cut(s) | 305, 319, 341 |
| BspCNI | CTCAG | 1 cut(s) | 188 |
| BspLI | GGNNCC | 1 cut(s) | 168 |
| BspTI | CTTAAG | 1 cut(s) | 73 |
| BsrI | ACTGG | 1 cut(s) | 88 |
| BssECI | CCNNGG | 1 cut(s) | 237 |
| BssT1I | CCWWGG | 1 cut(s) | 237 |
| Bst2UI | CCWGG | 3 cut(s) | 267, 290, 312 |
| Bst4CI | ACNGT | 3 cut(s) | 149, 159, 349 |
| BstAFI | CTTAAG | 1 cut(s) | 73 |
| BstDEI | CTNAG | 1 cut(s) | 175 |
| BstDSI | CCRYGG | 1 cut(s) | 237 |
| BstF5I | GGATG | 1 cut(s) | 66 |
| BstMAI | GTCTC | 2 cut(s) | 178, 409 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 316 |
| BstNI | CCWGG | 3 cut(s) | 267, 290, 312 |
| BstSCI | CCNGG | 3 cut(s) | 265, 288, 310 |
| BsuRI | GGCC | 3 cut(s) | 305, 319, 341 |
| BtgI | CCRYGG | 1 cut(s) | 237 |
| BtsCI | GGATG | 1 cut(s) | 66 |
| BtsIMutI | CAGTG | 1 cut(s) | 396 |
| Cfr13I | GGNCC | 1 cut(s) | 166 |
| CsiI | ACCWGGT | 1 cut(s) | 265 |
| Csp6I | GTAC | 1 cut(s) | 91 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 223, 258 |
| CviAII | CATG | 3 cut(s) | 58, 163, 238 |
| CviJI | RGCY | 5 cut(s) | 305, 310, 319, 341, 451 |
| CviKI_1 | RGCY | 5 cut(s) | 305, 310, 319, 341, 451 |
| CviQI | GTAC | 1 cut(s) | 91 |
| DdeI | CTNAG | 1 cut(s) | 175 |
| DraIII | CACNNNGTG | 1 cut(s) | 50 |
| EaeI | YGGCCR | 1 cut(s) | 339 |
| Eco130I | CCWWGG | 1 cut(s) | 237 |
| Eco47I | GGWCC | 1 cut(s) | 166 |
| EcoRII | CCWGG | 3 cut(s) | 265, 288, 310 |
| EcoT14I | CCWWGG | 1 cut(s) | 237 |
| ErhI | CCWWGG | 1 cut(s) | 237 |
| FaeI | CATG | 3 cut(s) | 61, 166, 241 |
| FaqI | GGGAC | 1 cut(s) | 152 |
| FatI | CATG | 3 cut(s) | 57, 162, 237 |
| FokI | GGATG | 1 cut(s) | 53 |
| HaeIII | GGCC | 3 cut(s) | 305, 319, 341 |
| Hin1II | CATG | 3 cut(s) | 61, 166, 241 |
| HincII | GTYRAC | 1 cut(s) | 352 |
| HindII | GTYRAC | 1 cut(s) | 352 |
| HinfI | GANTC | 2 cut(s) | 61, 431 |
| HphI | GGTGA | 2 cut(s) | 161, 389 |
| Hpy166II | GTNNAC | 2 cut(s) | 152, 352 |
| Hpy188I | TCNGA | 1 cut(s) | 178 |
| Hpy188III | TCNNGA | 3 cut(s) | 10, 251, 404 |
| Hpy8I | GTNNAC | 2 cut(s) | 152, 352 |
| Hpy99I | CGWCG | 1 cut(s) | 159 |
| HpyAV | CCTTC | 1 cut(s) | 215 |
| HpyCH4III | ACNGT | 3 cut(s) | 149, 159, 349 |
| HpyCH4V | TGCA | 1 cut(s) | 277 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 316 |
| HpyF3I | CTNAG | 1 cut(s) | 175 |
| Hsp92II | CATG | 3 cut(s) | 61, 166, 241 |
| LweI | GCATC | 1 cut(s) | 169 |
| MabI | ACCWGGT | 1 cut(s) | 265 |
| MaeIII | GTNAC | 1 cut(s) | 343 |
| MboII | GAAGA | 1 cut(s) | 73 |
| MhlI | GDGCHC | 1 cut(s) | 55 |
| MluCI | AATT | 1 cut(s) | 255 |
| MmeI | TCCRAC | 1 cut(s) | 401 |
| MnlI | CCTC | 2 cut(s) | 115, 189 |
| MseI | TTAA | 1 cut(s) | 74 |
| MspCI | CTTAAG | 1 cut(s) | 73 |
| MspR9I | CCNGG | 3 cut(s) | 267, 290, 312 |
| MvaI | CCWGG | 3 cut(s) | 267, 290, 312 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 316 |
| NcoI | CCATGG | 1 cut(s) | 237 |
| NlaIII | CATG | 3 cut(s) | 61, 166, 241 |
| NlaIV | GGNNCC | 1 cut(s) | 168 |
| NmeAIII | GCCGAG | 1 cut(s) | 331 |
| NmuCI | GTSAC | 1 cut(s) | 343 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 25 |
| PfeI | GAWTC | 2 cut(s) | 61, 431 |
| Psp6I | CCWGG | 3 cut(s) | 265, 288, 310 |
| PspGI | CCWGG | 3 cut(s) | 265, 288, 310 |
| PspN4I | GGNNCC | 1 cut(s) | 168 |
| PspPI | GGNCC | 1 cut(s) | 166 |
| RsaI | GTAC | 1 cut(s) | 92 |
| RsaNI | GTAC | 1 cut(s) | 91 |
| SaqAI | TTAA | 1 cut(s) | 74 |
| Sau96I | GGNCC | 1 cut(s) | 166 |
| ScrFI | CCNGG | 3 cut(s) | 267, 290, 312 |
| SduI | GDGCHC | 1 cut(s) | 55 |
| SetI | ASST | 3 cut(s) | 80, 190, 271 |
| SexAI | ACCWGGT | 1 cut(s) | 265 |
| SfaNI | GCATC | 1 cut(s) | 169 |
| SinI | GGWCC | 1 cut(s) | 166 |
| SmlI | CTYRAG | 1 cut(s) | 73 |
| SmoI | CTYRAG | 1 cut(s) | 73 |
| Sse9I | AATT | 1 cut(s) | 255 |
| StyD4I | CCNGG | 3 cut(s) | 265, 288, 310 |
| StyI | CCWWGG | 1 cut(s) | 237 |
| TaaI | ACNGT | 3 cut(s) | 149, 159, 349 |
| TasI | AATT | 1 cut(s) | 255 |
| TfiI | GAWTC | 2 cut(s) | 61, 431 |
| Tru1I | TTAA | 1 cut(s) | 74 |
| Tru9I | TTAA | 1 cut(s) | 74 |
| TscAI | CASTG | 1 cut(s) | 396 |
| TseFI | GTSAC | 1 cut(s) | 343 |
| Tsp45I | GTSAC | 1 cut(s) | 343 |
| TspDTI | ATGAA | 1 cut(s) | 151 |
| TspRI | CASTG | 1 cut(s) | 396 |
| Vha464I | CTTAAG | 1 cut(s) | 73 |
| VpaK11BI | GGWCC | 1 cut(s) | 166 |