Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb4

Orthogroup ID

OG0004852

Physical Location & Seq

Genomic Coordinates Forward (+)

7733297 .. 7744789

Gene Structure 11493 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_4g08081.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2712 bp

ATGAGCAAATTAATCCTCAACGTCGCTGCCACCGTCACTGCTGTCGACACCGCTACTGTTGCCATCGTCGCCACTGATACCCTTGTTGCTGCCCTTGATACAAGCATTGCTGCCACCAGCCAAAAAACTTTAGCCGTCCCTGACTTTCTGGAGTGTGTCAAAAGGAGAATTGGATTTGATGGTGTCATATGTGTTCTAAAAGATGATAATTGTCGTGGATTAGGCCTGTTTTGGAAGAAAGAAACCCTTGTTCGACTTTGTCTTTTAGCAGATAATTTCATTGATGTTGAGGTCGGAGAAATTGGTTCACCAGATTGCTTTCGCTTCATTGGAATATATGGCGTGGTGAATGCAGCAAACCGTGTGATTACCTGGAATATCCTACGTCAACTTGCAACGCAAGCTGATCTCCCATGGTTAGTTGCAGGAGATTTCAATGAAGTTTTATGTCTGGAAAACAAGTCTGGGGGCCCTCCACGAAGCAAGACATTGATTAACCGATTCCGGCAAGCTCTTGTTGATTGTTCTCTGGATGACATGGGCTTTTTGAAAGCTCTCCAAGTGCGCTTGAATGAAGTTCTTACTGCTCAAAAACATATTGGAGACAAAGGCCTAATGAAGGCAGATGGACTTTGGACTACAGACCCTAGAGAAGTCCAGCATCTATTGATTGACTACTATGAGGATATTATTCGGTCTAATGGCTCTGATCTAATTGCTGCACCTGATGGAATCCAACTTTACTCATCTAACCTAGATACCAAAAATCAAGGACCCAAAAGTGCTTTTGTTCCTGGAAGATTGATTTCCGATAATACACTAGTTGCTTATGAGGTTGCACATTTTATGAAGAGACTCCGAAGACAGGTTCAAGGTTTTTTCTCTCTGAAATTTGATATTTCCAAGGCGTACGACAGATTAGAAGGGAGTTTCCTGGAAGCAGTTTTGTTAAAGTTGGGGTTTTGTCAAGCCTGGGTTGCTATTGTTATGGCTACAGTTAAATCAGTTGGCCGTAGTAAAACTGCTATTCTCAGTTTTGTCAAAGAGAAGCTCAATAAGAAGCTTATTAGCTGGCGGTCTAAGCTGTTAAGTTCGGGTGGTAAGGAGTTGCTAATTAAAGTGGTAGCCCAGACAATTCCTAATTATGTGATGAACTGTTATGGCCTCCCCAAGTCCTTTTATGAAGAAATGCAACAACTTTGCTGTGAGTTTTTTTGGGGTAGTACTGAAGAGAAGAATAAGATTCACTGGCGGTCTTGGGACCGTTTCCCGGCTCATTCGCTATCAAAACCACCTGACACAATCTTTGAGTTGGTCTCAAACTTGATCGATGATGCCTCATGGACCTGGAATAGACATGCTGTAGCAGCGCTGAGTCTGAAGGGTTATAATGGTGACTTGAGCTGTGTAGTTTGCAACCAATCCGTGGAGTCTTTGGAGCATTTGTTCTACGCCTTCAACTTGTCACGTGAAATTTTCGGTAATCCTCCGTTCTCTTTTCCCCAATCTCACATTTCCTGGAAAGATTGGTTACTGGAAAGAGCAGTTACTCTAACTCCTGCTATGTTCAATAAGTTTCTGCCATGGCTTGGTGTGAAGAATATTTACAAGCCAATGTGGCTCCCTAGAAATCATCGGTTGCGAACATTCGAGACTCTCAGGGACAATTTATTGTTAGCTTTGCGCATAGAATGGAACAGGTTAGTTCCGCCCTCCATGCTGAGTTGGAGGCTGTGCGGTATGGAGTTGGGGTTAGCAGGTCATGGTCTACATTTCAATGTCCATTGTAACTGGTTCTCTATTGCTCTAGAGCTCATTCTGGATGCAATGATGTACGATCCGAATCGTATTCAGCGGCAGCCTCTCAGGCCTCCCCTCAGGTACAAGCCTTTTGGGAGCGAGGCCTTCATCTTCGTCATTGGTTGTCATAATTTGTACGAGCCTGTTGGTGTATCTCCCTACGGTTACAATCCTGGTTACGAAAATATAAGGAAGTTGTTGGACTTGCTCTTAACCCCTAATCGATTTAATATCCGTTTATCTGAAGTTACCTATACTACGCGGGTGGTTGTTGAAGAGCATGGAGACTGGAGAGGCAGTTCTATTACCATTCCAGCTTCGCGTTACAGTGGAACCCAATTGCGCTTTGACCGATCCGCAACCCGTCTCTCCATCCATTCCCCAATCAAACTTGTTGGAAAACCCAACTTCGTGAGCGAAAGGCGCTTCATGGTCCCTATCTCAGATGCCAGAGCAAGAAGGGATGTGTATTCGGAGATCATTGCCGGTTATGTTTTCACCCTTGGCTTCCCAGATTATGTATGCGGGCAAGTTATTCGACAGATATATCAAGTTATGTATGACGTTATTGAAGTGGGTGATGACTACGGGTTGCCTATCACTGTCATAATAACGGAAGTCGCTGTTAAAGAGTCGTGTTTTGGTTGTCGTGAGAGGCTTGATCACGTTTATGATGCAGAAGAAGGGATTACACGCTTGCCTTGCTTGCACGTACTTCATGTAGATTGCCTTGTTCAGCTTTTGCAGGTGAATCGTAAGCTTGTGTGTCCCATCTGTAGTCACCCACTGCCTTTTCTTGGTGAGCCATTAAAACTCTCGGAGGAACTGGATTGGCCTTCGTTGCTCTTGCTGGCTGCAACCGGTATAGTAACTGCTATGGTTCTTTGCAAACTATTGAGGCGTCGACCCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

RVT_1 RVT_3 zf-CCHC_4 zf-RVT

Protein Analysis

904

Amino Acids

102.29

Weight (kDa)

8.51

Isoelectric Point (pI)

38.09

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004852)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_3g45020 FvH4_3g45040 FvH4_3g45051 FvH4_3g45051 FvH4_4g04731 FvH4_4g08081 FvH4_5g09850 FvH4_5g09850 FvH4_5g09850 FvH4_5g09850 FvH4_5g09850 FvH4_5g09850
rosa_chinensis	RchiOBHm_Chr1g0327511 RchiOBHm_Chr2g0145621 RchiOBHm_Chr5g0082901
rosa_laevigata	RLG00000025408
rosa_multiflora	Rmu_sc0004031.1_g000014 Rmu_sc0007172.1_g000007
rosa_roxburghii	Rroxscaffold_1G00001500 Rroxscaffold_2G00154430 Rroxscaffold_6G00424730
rosa_rugosa	Rorug05G0480700 Rorug05G0480800 Rorug05G0480900 Rorug05G0481200 Rorug05G0481300 Rorug05G0481400 Rorug05G0481500
rosa_samantha	Rh5BG558000 Rh5DG566600
rosa_wichuraiana	Rw5G049760

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1389
AarI	CACCTGC	1 cut(s)	2536
Acc16I	TGCGCA	1 cut(s)	1685
Acc36I	ACCTGC	2 cut(s)	1748, 2536
AccB7I	CCANNNNNTGG	2 cut(s)	1426, 1589
AccI	GTMKAC	3 cut(s)	45, 1768, 2704
AccII	CGCG	2 cut(s)	2062, 2122
AciI	CCGC	9 cut(s)	51, 1075, 1252, 1709, 1737, 1855, 2062, 2157, 2325
AclWI	GGATC	2 cut(s)	1832, 2148
AcoI	YGGCCR	1 cut(s)	1009
AcsI	RAATTY	2 cut(s)	890, 1473
AcuI	CTGAAG	3 cut(s)	1248, 1400, 2064
AcvI	CACGTG	1 cut(s)	1469
AcyI	GRCGYC	1 cut(s)	2701
AfaI	GTAC	6 cut(s)	911, 1225, 1835, 1883, 1937, 2514
AfeI	AGCGCT	1 cut(s)	1371
AfiI	CCNNNNNNNGG	6 cut(s)	619, 865, 1270, 1426, 1589, 2597
AgeI	ACCGGT	1 cut(s)	2660
AgsI	TTSAA	9 cut(s)	436, 550, 571, 872, 1459, 1570, 1777, 2075, 2372
AhlI	ACTAGT	1 cut(s)	820
AjnI	CCWGG	7 cut(s)	371, 793, 933, 971, 1346, 1517, 1972
AloI	GAACNNNNNNTCC	4 cut(s)	1430, 1462, 2083, 2115
Alw21I	GWGCWC	1 cut(s)	1815
Alw26I	GTCTC	6 cut(s)	597, 847, 1321, 1646, 2079, 2171
AlwI	GGATC	2 cut(s)	1832, 2148
Aor51HI	AGCGCT	1 cut(s)	1371
AoxI	GGCC	8 cut(s)	223, 469, 610, 1009, 1162, 1868, 1902, 2633
ApaI	GGGCCC	1 cut(s)	473
ApeKI	GCWGC	8 cut(s)	26, 89, 110, 353, 719, 1367, 1858, 2654
ApoI	RAATTY	2 cut(s)	890, 1473
ArsI	GACNNNNNNTTYG	2 cut(s)	1289, 1321
AseI	ATTAAT	1 cut(s)	11
AsiGI	ACCGGT	1 cut(s)	2660
AspLEI	GCGC	5 cut(s)	567, 1372, 1686, 2145, 2226
AspS9I	GGNCC	6 cut(s)	469, 470, 773, 1261, 1344, 2233
AsuC2I	CCSGG	1 cut(s)	1271
AsuHPI	GGTGA	8 cut(s)	300, 358, 1406, 2290, 2390, 2560, 2573, 2612
AvaII	GGWCC	4 cut(s)	773, 1261, 1344, 2233
AxyI	CCTNAGG	1 cut(s)	1877
BaeGI	GKGCMC	1 cut(s)	473
BaeI	ACNNNNGTAYC	2 cut(s)	69, 102
BanII	GRGCYC	2 cut(s)	473, 1815
BarI	GAAGNNNNNNTAC	2 cut(s)	1589, 1621
BbrPI	CACGTG	1 cut(s)	1469
BbsI	GAAGAC	1 cut(s)	868
Bbv12I	GWGCWC	1 cut(s)	1815
BbvI	GCAGC	8 cut(s)	13, 76, 97, 365, 706, 1379, 1870, 2641
BccI	CCATC	6 cut(s)	71, 173, 620, 722, 2180, 2579
BceAI	ACGGC	2 cut(s)	119, 996
BcgI	CGANNNNNNTGC	4 cut(s)	2318, 2352, 2534, 2568
BciT130I	CCWGG	7 cut(s)	373, 795, 935, 973, 1348, 1519, 1974
BclI	TGATCA	1 cut(s)	2461
BcnI	CCSGG	1 cut(s)	1271
BcoDI	GTCTC	6 cut(s)	597, 847, 1321, 1646, 2079, 2171
BcuI	ACTAGT	1 cut(s)	820
BfaI	CTAG	5 cut(s)	648, 755, 821, 1626, 1808
BfmI	CTRYAG	4 cut(s)	639, 993, 1362, 2575
BfoI	RGCGCY	2 cut(s)	1373, 2227
BfuAI	ACCTGC	2 cut(s)	1748, 2536
BglI	GCCNNNNNGGC	2 cut(s)	1618, 1867
BisI	GCNGC	9 cut(s)	27, 90, 111, 354, 720, 1368, 1856, 1859, 2655
BlsI	GCNGC	9 cut(s)	28, 91, 112, 355, 721, 1369, 1857, 1860, 2656
BmcAI	AGTACT	1 cut(s)	1225
Bme1390I	CCNGG	8 cut(s)	373, 795, 935, 973, 1271, 1348, 1519, 1974
Bme18I	GGWCC	4 cut(s)	773, 1261, 1344, 2233
BmgT120I	GGNCC	6 cut(s)	469, 470, 773, 1261, 1344, 2233
BmiI	GGNNCC	7 cut(s)	470, 471, 775, 1262, 1622, 2134, 2235
BmrFI	CCNGG	8 cut(s)	373, 795, 935, 973, 1271, 1348, 1519, 1974
BmsI	GCATC	5 cut(s)	670, 1324, 1813, 2236, 2464
BpiI	GAAGAC	1 cut(s)	868
BplI	GAGNNNNNCTC	2 cut(s)	1301, 1333
BpmI	CTGGAG	2 cut(s)	170, 2110
BpuEI	CTTGAG	1 cut(s)	1420
BpuMI	CCSGG	1 cut(s)	1271
Bsa29I	ATCGAT	2 cut(s)	1329, 2023
BsaAI	YACGTR	2 cut(s)	1469, 2512
BsaBI	GATNNNNATC	1 cut(s)	1842
BsaHI	GRCGYC	1 cut(s)	2701
BsaI	GGTCTC	1 cut(s)	1321
BsaJI	CCNNGG	6 cut(s)	413, 903, 972, 1425, 1583, 2302
BsaWI	WCCGGW	1 cut(s)	2660
BsaXI	ACNNNNNCTCC	8 cut(s)	1430, 1460, 1540, 1570, 1736, 1766, 2083, 2113
Bsc4I	CCNNNNNNNGG	6 cut(s)	619, 865, 1270, 1426, 1589, 2597
Bse118I	RCCGGY	2 cut(s)	2285, 2660
Bse1I	ACTGG	5 cut(s)	1253, 1539, 1796, 2093, 2631
Bse21I	CCTNAGG	1 cut(s)	1877
Bse3DI	GCAATG	3 cut(s)	105, 1833, 2280
Bse8I	GATNNNNATC	1 cut(s)	1842
BseBI	CCWGG	7 cut(s)	373, 795, 935, 973, 1348, 1519, 1974
BseCI	ATCGAT	2 cut(s)	1329, 2023
BseDI	CCNNGG	6 cut(s)	413, 903, 972, 1425, 1583, 2302
BseGI	GGATG	4 cut(s)	538, 1828, 2172, 2269
BseJI	GATNNNNATC	1 cut(s)	1842
BseLI	CCNNNNNNNGG	6 cut(s)	619, 865, 1270, 1426, 1589, 2597
BseMI	GCAATG	3 cut(s)	105, 1833, 2280
BseMII	CTCAG	7 cut(s)	1045, 1364, 1672, 1712, 1879, 1891, 2256
BseNI	ACTGG	5 cut(s)	1253, 1539, 1796, 2093, 2631
BseSI	GKGCMC	1 cut(s)	473
BseXI	GCAGC	8 cut(s)	13, 76, 97, 365, 706, 1379, 1870, 2641
BsgI	GTGCAG	1 cut(s)	705
Bsh1236I	CGCG	2 cut(s)	2062, 2122
BshFI	GGCC	8 cut(s)	225, 471, 612, 1011, 1164, 1870, 1904, 2635
BshTI	ACCGGT	1 cut(s)	2660
BshVI	ATCGAT	2 cut(s)	1329, 2023
BsiHKAI	GWGCWC	1 cut(s)	1815
BsiSI	CCGG	4 cut(s)	505, 1271, 2286, 2661
BsiWI	CGTACG	1 cut(s)	909
BslFI	GGGAC	5 cut(s)	122, 1274, 1676, 2219, 2553
BslI	CCNNNNNNNGG	6 cut(s)	619, 865, 1270, 1426, 1589, 2597
BsmAI	GTCTC	6 cut(s)	597, 847, 1321, 1646, 2079, 2171
BsmBI	CGTCTC	1 cut(s)	2171
BsmFI	GGGAC	5 cut(s)	122, 1274, 1676, 2219, 2553
BsmI	GAATGC	1 cut(s)	355
BsnI	GGCC	8 cut(s)	225, 471, 612, 1011, 1164, 1870, 1904, 2635
Bso31I	GGTCTC	1 cut(s)	1321
Bsp120I	GGGCCC	1 cut(s)	469
Bsp1286I	GDGCHC	2 cut(s)	473, 1815
Bsp143I	GATC	7 cut(s)	406, 709, 1326, 1837, 2153, 2277, 2461
Bsp19I	CCATGG	2 cut(s)	413, 1583
BspACI	CCGC	9 cut(s)	51, 1075, 1252, 1709, 1737, 1855, 2062, 2157, 2325
BspANI	GGCC	8 cut(s)	225, 471, 612, 1011, 1164, 1870, 1904, 2635
BspCNI	CTCAG	7 cut(s)	1044, 1365, 1671, 1713, 1878, 1890, 2255
BspDI	ATCGAT	2 cut(s)	1329, 2023
BspFNI	CGCG	2 cut(s)	2062, 2122
BspLI	GGNNCC	7 cut(s)	470, 471, 775, 1262, 1622, 2134, 2235
BspMI	ACCTGC	2 cut(s)	1748, 2536
BspPI	GGATC	2 cut(s)	1832, 2148
BspQI	GCTCTTC	1 cut(s)	2070
BspTNI	GGTCTC	1 cut(s)	1321
BsrDI	GCAATG	3 cut(s)	105, 1833, 2280
BsrFI	RCCGGY	2 cut(s)	2285, 2660
BsrI	ACTGG	5 cut(s)	1253, 1539, 1796, 2093, 2631
BssAI	RCCGGY	2 cut(s)	2285, 2660
BssECI	CCNNGG	6 cut(s)	413, 903, 972, 1425, 1583, 2302
BssMI	GATC	7 cut(s)	406, 709, 1326, 1837, 2153, 2277, 2461
BssNI	GRCGYC	1 cut(s)	2701
BssT1I	CCWWGG	4 cut(s)	413, 903, 1583, 2302
Bst2UI	CCWGG	7 cut(s)	373, 795, 935, 973, 1348, 1519, 1974
Bst4CI	ACNGT	9 cut(s)	34, 58, 362, 997, 1157, 1265, 1964, 2129, 2404
Bst6I	CTCTTC	3 cut(s)	845, 1224, 2070
BstACI	GRCGYC	1 cut(s)	2701
BstBAI	YACGTR	2 cut(s)	1469, 2512
BstC8I	GCNNGC	7 cut(s)	402, 510, 1073, 2327, 2498, 2507, 2652
BstDEI	CTNAG	8 cut(s)	1031, 1080, 1373, 1658, 1721, 1865, 1877, 2242
BstDSI	CCRYGG	3 cut(s)	413, 1425, 1583
BstENI	CCTNNNNNAGG	1 cut(s)	617
BstF5I	GGATG	4 cut(s)	538, 1828, 2172, 2269
BstFNI	CGCG	2 cut(s)	2062, 2122
BstH2I	RGCGCY	2 cut(s)	1373, 2227
BstHHI	GCGC	5 cut(s)	567, 1372, 1686, 2145, 2226
BstKTI	GATC	7 cut(s)	409, 712, 1329, 1840, 2156, 2280, 2464
BstMAI	GTCTC	6 cut(s)	597, 847, 1321, 1646, 2079, 2171
BstMBI	GATC	7 cut(s)	406, 709, 1326, 1837, 2153, 2277, 2461
BstNI	CCWGG	7 cut(s)	373, 795, 935, 973, 1348, 1519, 1974
BstNSI	RCATGY	1 cut(s)	1361
BstSCI	CCNGG	8 cut(s)	371, 793, 933, 971, 1269, 1346, 1517, 1972
BstSFI	CTRYAG	4 cut(s)	639, 993, 1362, 2575
BstSLI	GKGCMC	1 cut(s)	473
BstUI	CGCG	2 cut(s)	2062, 2122
BstV1I	GCAGC	8 cut(s)	13, 76, 97, 365, 706, 1379, 1870, 2641
BstV2I	GAAGAC	1 cut(s)	868
Bsu15I	ATCGAT	2 cut(s)	1329, 2023
Bsu36I	CCTNAGG	1 cut(s)	1877
BsuRI	GGCC	8 cut(s)	225, 471, 612, 1011, 1164, 1870, 1904, 2635
BsuTUI	ATCGAT	2 cut(s)	1329, 2023
BtgI	CCRYGG	3 cut(s)	413, 1425, 1583
BtsCI	GGATG	4 cut(s)	538, 1828, 2172, 2269
BtsI	GCAGTG	2 cut(s)	36, 2585
BtsIMutI	CAGTG	6 cut(s)	36, 72, 1246, 2134, 2400, 2585
BveI	ACCTGC	2 cut(s)	1748, 2536
Cac8I	GCNNGC	7 cut(s)	402, 510, 1073, 2327, 2498, 2507, 2652
CfoI	GCGC	5 cut(s)	567, 1372, 1686, 2145, 2226
Cfr10I	RCCGGY	2 cut(s)	2285, 2660
Cfr13I	GGNCC	6 cut(s)	469, 470, 773, 1261, 1344, 2233
ClaI	ATCGAT	2 cut(s)	1329, 2023
CseI	GACGC	1 cut(s)	2690
Csp6I	GTAC	6 cut(s)	910, 1224, 1834, 1882, 1936, 2513
CspAI	ACCGGT	1 cut(s)	2660
CviQI	GTAC	6 cut(s)	910, 1224, 1834, 1882, 1936, 2513
DdeI	CTNAG	8 cut(s)	1031, 1080, 1373, 1658, 1721, 1865, 1877, 2242
DpnI	GATC	7 cut(s)	408, 711, 1328, 1839, 2155, 2279, 2463
DpnII	GATC	7 cut(s)	406, 709, 1326, 1837, 2153, 2277, 2461
EaeI	YGGCCR	1 cut(s)	1009
Eam1104I	CTCTTC	3 cut(s)	845, 1224, 2070
EarI	CTCTTC	3 cut(s)	845, 1224, 2070
EciI	GGCGGA	1 cut(s)	1698
Ecl136II	GAGCTC	1 cut(s)	1813
Eco130I	CCWWGG	4 cut(s)	413, 903, 1583, 2302
Eco147I	AGGCCT	4 cut(s)	225, 612, 1870, 1904
Eco24I	GRGCYC	2 cut(s)	473, 1815
Eco31I	GGTCTC	1 cut(s)	1321
Eco47I	GGWCC	4 cut(s)	773, 1261, 1344, 2233
Eco47III	AGCGCT	1 cut(s)	1371
Eco53kI	GAGCTC	1 cut(s)	1813
Eco57I	CTGAAG	3 cut(s)	1248, 1400, 2064
Eco72I	CACGTG	1 cut(s)	1469
Eco81I	CCTNAGG	1 cut(s)	1877
EcoICRI	GAGCTC	1 cut(s)	1813
EcoNI	CCTNNNNNAGG	1 cut(s)	617
EcoO109I	RGGNCCY	3 cut(s)	469, 470, 773
EcoRII	CCWGG	7 cut(s)	371, 793, 933, 971, 1346, 1517, 1972
EcoT14I	CCWWGG	4 cut(s)	413, 903, 1583, 2302
EcoT38I	GRGCYC	2 cut(s)	473, 1815
ErhI	CCWWGG	4 cut(s)	413, 903, 1583, 2302
Esp3I	CGTCTC	1 cut(s)	2171
FalI	AAGNNNNNCTT	2 cut(s)	231, 263
FaqI	GGGAC	5 cut(s)	122, 1274, 1676, 2219, 2553
FauI	CCCGC	2 cut(s)	2055, 2318
FauNDI	CATATG	1 cut(s)	188
FbaI	TGATCA	1 cut(s)	2461
FblI	GTMKAC	3 cut(s)	45, 1768, 2704
Fnu4HI	GCNGC	9 cut(s)	27, 90, 111, 354, 720, 1368, 1856, 1859, 2655
FokI	GGATG	4 cut(s)	545, 1835, 2159, 2276
FriOI	GRGCYC	2 cut(s)	473, 1815
Fsp4HI	GCNGC	9 cut(s)	27, 90, 111, 354, 720, 1368, 1856, 1859, 2655
FspBI	CTAG	5 cut(s)	648, 755, 821, 1626, 1808
FspI	TGCGCA	1 cut(s)	1685
GlaI	GCGC	5 cut(s)	566, 1371, 1685, 2144, 2225
GluI	GCNGC	9 cut(s)	27, 90, 111, 354, 720, 1368, 1856, 1859, 2655
GsuI	CTGGAG	2 cut(s)	170, 2110
HaeII	RGCGCY	2 cut(s)	1373, 2227
HaeIII	GGCC	8 cut(s)	225, 471, 612, 1011, 1164, 1870, 1904, 2635
HapII	CCGG	4 cut(s)	505, 1271, 2286, 2661
HgaI	GACGC	1 cut(s)	2690
HhaI	GCGC	5 cut(s)	567, 1372, 1686, 2145, 2226
Hin1I	GRCGYC	1 cut(s)	2701
Hin6I	GCGC	5 cut(s)	565, 1370, 1684, 2143, 2224
HinP1I	GCGC	5 cut(s)	565, 1370, 1684, 2143, 2224
HincII	GTYRAC	3 cut(s)	46, 389, 2705
HindII	GTYRAC	3 cut(s)	46, 389, 2705
HindIII	AAGCTT	2 cut(s)	1061, 2558
HpaII	CCGG	4 cut(s)	505, 1271, 2286, 2661
HphI	GGTGA	8 cut(s)	300, 358, 1406, 2290, 2390, 2560, 2573, 2612
Hpy166II	GTNNAC	5 cut(s)	46, 308, 389, 1769, 2705
Hpy188III	TCNNGA	8 cut(s)	149, 452, 530, 1651, 1808, 1820, 2212, 2450
Hpy8I	GTNNAC	5 cut(s)	46, 308, 389, 1769, 2705
Hpy99I	CGWCG	3 cut(s)	26, 71, 2706
HpyAV	CCTTC	8 cut(s)	613, 917, 1375, 1465, 1915, 2253, 2477, 2646
HpyCH4III	ACNGT	9 cut(s)	34, 58, 362, 997, 1157, 1265, 1964, 2129, 2404
HpyCH4IV	ACGT	6 cut(s)	21, 385, 1468, 2364, 2466, 2511
HpyF3I	CTNAG	8 cut(s)	1031, 1080, 1373, 1658, 1721, 1865, 1877, 2242
HpySE526I	ACGT	6 cut(s)	21, 385, 1468, 2364, 2466, 2511
Hsp92I	GRCGYC	1 cut(s)	2701
HspAI	GCGC	5 cut(s)	565, 1370, 1684, 2143, 2224
Ksp22I	TGATCA	1 cut(s)	2461
Kzo9I	GATC	7 cut(s)	406, 709, 1326, 1837, 2153, 2277, 2461
LguI	GCTCTTC	1 cut(s)	2070
LmnI	GCTCC	3 cut(s)	1438, 1626, 1896
Lsp1109I	GCAGC	8 cut(s)	13, 76, 97, 365, 706, 1379, 1870, 2641
LweI	GCATC	5 cut(s)	670, 1324, 1813, 2236, 2464
MaeI	CTAG	5 cut(s)	648, 755, 821, 1626, 1808
MaeII	ACGT	6 cut(s)	21, 385, 1468, 2364, 2466, 2511
MalI	GATC	7 cut(s)	408, 711, 1328, 1839, 2155, 2279, 2463
MboI	GATC	7 cut(s)	406, 709, 1326, 1837, 2153, 2277, 2461
MfeI	CAATTG	1 cut(s)	2138
MhlI	GDGCHC	2 cut(s)	473, 1815
MlyI	GAGTC	5 cut(s)	849, 1384, 1439, 1648, 2441
MmeI	TCCRAC	5 cut(s)	274, 760, 1706, 1980, 2176
MslI	CAYNNNNRTG	2 cut(s)	1776, 2469
MspA1I	CMGCKG	1 cut(s)	1855
MspI	CCGG	4 cut(s)	505, 1271, 2286, 2661
MspR9I	CCNGG	8 cut(s)	373, 795, 935, 973, 1271, 1348, 1519, 1974
MunI	CAATTG	1 cut(s)	2138
Mva1269I	GAATGC	1 cut(s)	355
MvaI	CCWGG	7 cut(s)	373, 795, 935, 973, 1348, 1519, 1974
MvnI	CGCG	2 cut(s)	2062, 2122
NciI	CCSGG	1 cut(s)	1271
NcoI	CCATGG	2 cut(s)	413, 1583
NdeI	CATATG	1 cut(s)	188
NdeII	GATC	7 cut(s)	406, 709, 1326, 1837, 2153, 2277, 2461
NlaIV	GGNNCC	7 cut(s)	470, 471, 775, 1262, 1622, 2134, 2235
NmuCI	GTSAC	4 cut(s)	34, 1394, 1464, 2579
NsbI	TGCGCA	1 cut(s)	1685
NspI	RCATGY	1 cut(s)	1361
PaqCI	CACCTGC	1 cut(s)	2536
PceI	AGGCCT	4 cut(s)	225, 612, 1870, 1904
PciSI	GCTCTTC	1 cut(s)	2070
PcsI	WCGNNNNNNNCGW	1 cut(s)	30
PctI	GAATGC	1 cut(s)	355
PfeI	GAWTC	5 cut(s)	501, 732, 1243, 1843, 2551
Pfl23II	CGTACG	1 cut(s)	909
PflFI	GACNNNGTC	1 cut(s)	258
PflMI	CCANNNNNTGG	2 cut(s)	1426, 1589
PfoI	TCCNGGA	3 cut(s)	793, 933, 1517
PinAI	ACCGGT	1 cut(s)	2660
PkrI	GCNGC	9 cut(s)	28, 91, 112, 355, 721, 1369, 1857, 1860, 2656
PleI	GAGTC	5 cut(s)	849, 1383, 1438, 1648, 2440
PmaCI	CACGTG	1 cut(s)	1469
PmlI	CACGTG	1 cut(s)	1469
PpsI	GAGTC	5 cut(s)	849, 1383, 1438, 1648, 2440
Ppu21I	YACGTR	2 cut(s)	1469, 2512
PpuMI	RGGWCCY	1 cut(s)	773
PshBI	ATTAAT	1 cut(s)	11
PsiI	TTATAA	1 cut(s)	1389
Psp124BI	GAGCTC	1 cut(s)	1815
Psp5II	RGGWCCY	1 cut(s)	773
Psp6I	CCWGG	7 cut(s)	371, 793, 933, 971, 1346, 1517, 1972
PspCI	CACGTG	1 cut(s)	1469
PspGI	CCWGG	7 cut(s)	371, 793, 933, 971, 1346, 1517, 1972
PspLI	CGTACG	1 cut(s)	909
PspN4I	GGNNCC	7 cut(s)	470, 471, 775, 1262, 1622, 2134, 2235
PspOMI	GGGCCC	1 cut(s)	469
PspPI	GGNCC	6 cut(s)	469, 470, 773, 1261, 1344, 2233
PspPPI	RGGWCCY	1 cut(s)	773
PsyI	GACNNNGTC	1 cut(s)	258
RsaI	GTAC	6 cut(s)	911, 1225, 1835, 1883, 1937, 2514
RsaNI	GTAC	6 cut(s)	910, 1224, 1834, 1882, 1936, 2513
RseI	CAYNNNNRTG	2 cut(s)	1776, 2469
SacI	GAGCTC	1 cut(s)	1815
SalI	GTCGAC	2 cut(s)	44, 2703
SapI	GCTCTTC	1 cut(s)	2070
SatI	GCNGC	9 cut(s)	27, 90, 111, 354, 720, 1368, 1856, 1859, 2655
Sau3AI	GATC	7 cut(s)	406, 709, 1326, 1837, 2153, 2277, 2461
Sau96I	GGNCC	6 cut(s)	469, 470, 773, 1261, 1344, 2233
ScaI	AGTACT	1 cut(s)	1225
SchI	GAGTC	5 cut(s)	849, 1384, 1439, 1648, 2441
ScrFI	CCNGG	8 cut(s)	373, 795, 935, 973, 1271, 1348, 1519, 1974
SduI	GDGCHC	2 cut(s)	473, 1815
SfaNI	GCATC	5 cut(s)	670, 1324, 1813, 2236, 2464
SfcI	CTRYAG	4 cut(s)	639, 993, 1362, 2575
SinI	GGWCC	4 cut(s)	773, 1261, 1344, 2233
SmiMI	CAYNNNNRTG	2 cut(s)	1776, 2469
SmlI	CTYRAG	1 cut(s)	1399
SmoI	CTYRAG	1 cut(s)	1399
SpeI	ACTAGT	1 cut(s)	820
SseBI	AGGCCT	4 cut(s)	225, 612, 1870, 1904
SsiI	CCGC	9 cut(s)	51, 1075, 1252, 1709, 1737, 1855, 2062, 2157, 2325
SspI	AATATT	1 cut(s)	1603
SspMI	CTAG	5 cut(s)	648, 755, 821, 1626, 1808
SstI	GAGCTC	1 cut(s)	1815
StuI	AGGCCT	4 cut(s)	225, 612, 1870, 1904
StyD4I	CCNGG	8 cut(s)	371, 793, 933, 971, 1269, 1346, 1517, 1972
StyI	CCWWGG	4 cut(s)	413, 903, 1583, 2302
TaaI	ACNGT	9 cut(s)	34, 58, 362, 997, 1157, 1265, 1964, 2129, 2404
TaiI	ACGT	6 cut(s)	24, 388, 1471, 2367, 2469, 2514
TaqI	TCGA	7 cut(s)	45, 253, 1329, 1650, 2023, 2338, 2704
TaqII	GACCGA	2 cut(s)	684, 2166
TatI	WGTACW	1 cut(s)	1223
TauI	GCSGC	1 cut(s)	1858
TfiI	GAWTC	5 cut(s)	501, 732, 1243, 1843, 2551
TscAI	CASTG	6 cut(s)	43, 79, 1253, 2134, 2407, 2592
TseFI	GTSAC	4 cut(s)	34, 1394, 1464, 2579
TseI	GCWGC	8 cut(s)	26, 89, 110, 353, 719, 1367, 1858, 2654
Tsp45I	GTSAC	4 cut(s)	34, 1394, 1464, 2579
TspGWI	ACGGA	4 cut(s)	1414, 1479, 2024, 2429
TspRI	CASTG	6 cut(s)	43, 79, 1253, 2134, 2407, 2592
Tth111I	GACNNNGTC	1 cut(s)	258
Van91I	CCANNNNNTGG	2 cut(s)	1426, 1589
VpaK11BI	GGWCC	4 cut(s)	773, 1261, 1344, 2233
VspI	ATTAAT	1 cut(s)	11
XagI	CCTNNNNNAGG	1 cut(s)	617
XapI	RAATTY	2 cut(s)	890, 1473
XbaI	TCTAGA	1 cut(s)	1807
XceI	RCATGY	1 cut(s)	1361
XmiI	GTMKAC	3 cut(s)	45, 1768, 2704
XspI	CTAG	5 cut(s)	648, 755, 821, 1626, 1808
ZrmI	AGTACT	1 cut(s)	1225

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.