FvH4_4g22010
ERF Family

Eukaryotic peptide chain release factor subunit

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb4
Physical Location & Seq
Reverse (-)
24939912 .. 24942823
2912 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_4g22010.t2

Sequence Viewer

Length: 1314 bp
ATGTCGGATGGTCAGGAGACTGATAAGAACATTGAGATATGGAAGATTAAGAAGCTGATTAAGGCTCTTGAAGCTGCAAGGGGTAATGGCACCAGCATGATTTCTCTCATCATGCCTCCCCGCGATCAGATATCTCGTGTTACTAAGATGCTCGGTGATGAGTTTGGAACTGCTTCAAATATCAAGAGTAGGGTGAATCGTCAGTCAGTTCTGGGGGCGATTACATCTGCTCAGCAGAGACTCAAGCTTTACAACAAGGTTCCTCCAAATGGGCTTGTTCTATATACCGGAACAATTGTTACCGACGATGGTAAGGAAAAGAAGGTGACAATTGATTTTGAGCCTTTCAGGCCTATCAATGCGTCTCTTTACCTCTGTGATAACAAGTTCCATATTGAAGCTCTGAATGAACTCTTGGAATCTGATGACAAATTTGGTTTCATTGTCATGGATGGTAATGGGACTCTTTTTGGGACACTAAGTGGCAACACAAGAGAGGTGCTGCATAAGTTTAGTGTTGACCTGCCAAAGAAACACGGAAGAGGAGGACAATCTGCTCTTCGTTTTGCTCGTCTTCGAATGGAGAAGCGTCACAACTATGTTAGGAAGACTGCAGAGCTTGCCACACAGTTTTATATTAATCCTGCCACCAGCCAGCCCAATGTTTCAGGATTGATACTTGCTGGATCTGCTGACTTCAAAACTGAGCTCAGTCAGTCAGATATGTTTGATCCCCGCCTGCAGGCCAAAATACTCAATGTGGTGGATGTTTCTTATGGAGGAGAGAATGGCTTTAATCAGGCTATCGAGTTGTCTGCAGAAATCCTGTCCAATGTGAAGTTCATACAGGAGAAGAAGTTGATCGGAAAATACTTCGAGGAGATCAGTCAGGATACTGGGAAGTATGTTTTTGGTGTAGATGACACACTTAAAGCTTTGGAGATGGGTGCTGTTGAGATACTAATTGTGTGGGAAAGTCTTGACATCAATAGGTATGTGCTAAAACATAGCAGTACTGGCGAGTTGATTGTGAAGCATTTGAACAAGGAGCAGGAAAACAATCAGAGCAACTTCCGGGATCCTGAGACCAATGCTGAGTTGGAGGTTCAGGAAAAGATCTCATTATTGGAGTGGTTTGCTAATGAGTACCGGCGGTTTGGGTGTTCTCTGGAGTTTGTGACCAACAAATCACAAGAGGGGTCACAGTTCTGCCGAGGTTTTGGAGGGATTGGAGGAATTCTCCGCTACCAGCTTGACATGAGGTCTTTTGATGAGTTTTCTGATGATGGTGAAGTGTATGATGATTCTGAATAG

Protein Analysis

438

Amino Acids

49.21

Weight (kDa)

5.46

Isoelectric Point (pI)

35.89

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
eRF1_1 PF03463 17 - 139 1.7e-52 eRF1 domain 1
eRF1_2 PF03464 144 - 277 1.3e-42 eRF1 domain 2
eRF1_3 PF03465 281 - 418 1.3e-32 eRF1 domain 3
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 531
AccB1I GGYRCC 1 cut(s) 89
AccII CGCG 1 cut(s) 123
AciI CCGC 4 cut(s) 121, 736, 1153, 1243
AclWI GGATC 4 cut(s) 694, 725, 1073, 1086
AcsI RAATTY 2 cut(s) 431, 1236
AdeI CACNNNGTG 1 cut(s) 482
AfaI GTAC 2 cut(s) 1015, 1148
AfiI CCNNNNNNNGG 2 cut(s) 269, 742
AgsI TTSAA 5 cut(s) 71, 177, 398, 700, 1042
AhdI GACNNNNNGTC 1 cut(s) 1261
AjuI GAANNNNNNNTTGG 4 cut(s) 398, 430, 824, 856
AluBI AGCT 8 cut(s) 55, 74, 247, 401, 619, 709, 935, 1252
AluI AGCT 8 cut(s) 55, 74, 247, 401, 619, 709, 935, 1252
Alw21I GWGCWC 1 cut(s) 711
Alw26I GTCTC 4 cut(s) 11, 232, 369, 1079
AlwI GGATC 4 cut(s) 694, 725, 1073, 1086
AoxI GGCC 2 cut(s) 350, 744
ApeKI GCWGC 2 cut(s) 74, 502
ApoI RAATTY 2 cut(s) 431, 1236
AseI ATTAAT 1 cut(s) 639
Asp700I GAANNNNTTC 1 cut(s) 172
AsuC2I CCSGG 1 cut(s) 1076
AsuHPI GGTGA 4 cut(s) 167, 205, 337, 1301
AsuII TTCGAA 1 cut(s) 577
BamHI GGATCC 1 cut(s) 1078
BanI GGYRCC 1 cut(s) 89
BanII GRGCYC 1 cut(s) 711
BauI CACGAG 1 cut(s) 135
BbsI GAAGAC 2 cut(s) 566, 614
Bbv12I GWGCWC 1 cut(s) 711
BbvI GCAGC 2 cut(s) 61, 489
BccI CCATC 5 cut(s) 2, 302, 446, 937, 1280
BcgI CGANNNNNNTGC 2 cut(s) 797, 831
BciVI GTATCC 1 cut(s) 886
BcnI CCSGG 1 cut(s) 1076
BcoDI GTCTC 4 cut(s) 11, 232, 369, 1079
BfmI CTRYAG 3 cut(s) 612, 740, 816
BfuAI ACCTGC 1 cut(s) 531
BfuI GTATCC 1 cut(s) 886
BglI GCCNNNNNGGC 1 cut(s) 349
BglII AGATCT 1 cut(s) 1116
BisI GCNGC 2 cut(s) 75, 503
BlpI GCTNAGC 1 cut(s) 231
BlsI GCNGC 2 cut(s) 76, 504
BmcAI AGTACT 1 cut(s) 1015
Bme1390I CCNGG 1 cut(s) 1076
BmeRI GACNNNNNGTC 1 cut(s) 1261
BmiI GGNNCC 3 cut(s) 91, 261, 1080
BmrFI CCNGG 1 cut(s) 1076
BmrI ACTGGG 1 cut(s) 906
BmsI GCATC 1 cut(s) 138
BmuI ACTGGG 1 cut(s) 906
BpiI GAAGAC 2 cut(s) 566, 614
BplI GAGNNNNNCTC 2 cut(s) 1224, 1256
BpmI CTGGAG 1 cut(s) 1190
Bpu1102I GCTNAGC 1 cut(s) 231
Bpu14I TTCGAA 1 cut(s) 577
BpuEI CTTGAG 1 cut(s) 227
BpuMI CCSGG 1 cut(s) 1076
BsaI GGTCTC 1 cut(s) 1079
BsaJI CCNNGG 1 cut(s) 1213
BsaWI WCCGGW 1 cut(s) 287
BsaXI ACNNNNNCTCC 2 cut(s) 842, 872
Bsc4I CCNNNNNNNGG 2 cut(s) 269, 742
Bse118I RCCGGY 1 cut(s) 1149
Bse1I ACTGG 2 cut(s) 901, 1021
BseDI CCNNGG 1 cut(s) 1213
BseGI GGATG 3 cut(s) 13, 457, 772
BseLI CCNNNNNNNGG 2 cut(s) 269, 742
BseMII CTCAG 5 cut(s) 245, 696, 724, 1074, 1086
BseNI ACTGG 2 cut(s) 901, 1021
BseRI GAGGAG 3 cut(s) 558, 795, 893
BseXI GCAGC 2 cut(s) 61, 489
Bsh1236I CGCG 1 cut(s) 123
BshFI GGCC 2 cut(s) 352, 746
BshNI GGYRCC 1 cut(s) 89
BsiHKAI GWGCWC 1 cut(s) 711
BsiSI CCGG 3 cut(s) 288, 1075, 1150
BslFI GGGAC 2 cut(s) 475, 487
BslI CCNNNNNNNGG 2 cut(s) 269, 742
BsmAI GTCTC 4 cut(s) 11, 232, 369, 1079
BsmBI CGTCTC 1 cut(s) 369
BsmFI GGGAC 2 cut(s) 475, 487
BsnI GGCC 2 cut(s) 352, 746
Bso31I GGTCTC 1 cut(s) 1079
Bsp119I TTCGAA 1 cut(s) 577
Bsp1286I GDGCHC 1 cut(s) 711
Bsp143I GATC 7 cut(s) 124, 686, 730, 861, 882, 1078, 1116
Bsp1720I GCTNAGC 1 cut(s) 231
BspACI CCGC 4 cut(s) 121, 736, 1153, 1243
BspANI GGCC 2 cut(s) 352, 746
BspCNI CTCAG 5 cut(s) 244, 697, 723, 1075, 1087
BspFNI CGCG 1 cut(s) 123
BspLI GGNNCC 3 cut(s) 91, 261, 1080
BspMAI CTGCAG 3 cut(s) 616, 744, 820
BspMI ACCTGC 1 cut(s) 531
BspPI GGATC 4 cut(s) 694, 725, 1073, 1086
BspQI GCTCTTC 1 cut(s) 564
BspT104I TTCGAA 1 cut(s) 577
BspT107I GGYRCC 1 cut(s) 89
BspTNI GGTCTC 1 cut(s) 1079
BsrFI RCCGGY 1 cut(s) 1149
BsrI ACTGG 2 cut(s) 901, 1021
BssAI RCCGGY 1 cut(s) 1149
BssECI CCNNGG 1 cut(s) 1213
BssMI GATC 7 cut(s) 124, 686, 730, 861, 882, 1078, 1116
BssSI CACGAG 1 cut(s) 135
Bst2BI CACGAG 1 cut(s) 135
Bst4CI ACNGT 2 cut(s) 630, 1206
Bst6I CTCTTC 2 cut(s) 535, 564
BstAPI GCANNNNNTGC 1 cut(s) 620
BstBI TTCGAA 1 cut(s) 577
BstC8I GCNNGC 4 cut(s) 621, 656, 740, 744
BstDEI CTNAG 7 cut(s) 144, 231, 479, 705, 710, 1083, 1095
BstF5I GGATG 3 cut(s) 13, 457, 772
BstFNI CGCG 1 cut(s) 123
BstKTI GATC 7 cut(s) 127, 689, 733, 864, 885, 1081, 1119
BstMAI GTCTC 4 cut(s) 11, 232, 369, 1079
BstMBI GATC 7 cut(s) 124, 686, 730, 861, 882, 1078, 1116
BstMWI GCNNNNNNNGC 5 cut(s) 71, 349, 620, 689, 1017
BstSCI CCNGG 1 cut(s) 1074
BstSFI CTRYAG 3 cut(s) 612, 740, 816
BstUI CGCG 1 cut(s) 123
BstV1I GCAGC 2 cut(s) 61, 489
BstV2I GAAGAC 2 cut(s) 566, 614
BstX2I RGATCY 3 cut(s) 686, 1078, 1116
BstYI RGATCY 3 cut(s) 686, 1078, 1116
BsuI GTATCC 1 cut(s) 886
BsuRI GGCC 2 cut(s) 352, 746
BtsCI GGATG 3 cut(s) 13, 457, 772
BveI ACCTGC 1 cut(s) 531
Cac8I GCNNGC 4 cut(s) 621, 656, 740, 744
Cfr10I RCCGGY 1 cut(s) 1149
CseI GACGC 2 cut(s) 351, 578
Csp6I GTAC 2 cut(s) 1014, 1147
CviAII CATG 4 cut(s) 97, 112, 448, 1258
CviQI GTAC 2 cut(s) 1014, 1147
DdeI CTNAG 7 cut(s) 144, 231, 479, 705, 710, 1083, 1095
DpnI GATC 7 cut(s) 126, 688, 732, 863, 884, 1080, 1118
DpnII GATC 7 cut(s) 124, 686, 730, 861, 882, 1078, 1116
DraIII CACNNNGTG 1 cut(s) 482
DriI GACNNNNNGTC 1 cut(s) 1261
Eam1104I CTCTTC 2 cut(s) 535, 564
Eam1105I GACNNNNNGTC 1 cut(s) 1261
EarI CTCTTC 2 cut(s) 535, 564
Ecl136II GAGCTC 1 cut(s) 709
Eco147I AGGCCT 1 cut(s) 352
Eco24I GRGCYC 1 cut(s) 711
Eco31I GGTCTC 1 cut(s) 1079
Eco32I GATATC 1 cut(s) 132
Eco53kI GAGCTC 1 cut(s) 709
EcoICRI GAGCTC 1 cut(s) 709
EcoRI GAATTC 1 cut(s) 1236
EcoRV GATATC 1 cut(s) 132
EcoT38I GRGCYC 1 cut(s) 711
Esp3I CGTCTC 1 cut(s) 369
FaeI CATG 4 cut(s) 100, 115, 451, 1261
FaqI GGGAC 2 cut(s) 475, 487
FatI CATG 4 cut(s) 96, 111, 447, 1257
FauI CCCGC 2 cut(s) 128, 743
Fnu4HI GCNGC 2 cut(s) 75, 503
FokI GGATG 3 cut(s) 20, 464, 779
FriOI GRGCYC 1 cut(s) 711
Fsp4HI GCNGC 2 cut(s) 75, 503
GluI GCNGC 2 cut(s) 75, 503
GsuI CTGGAG 1 cut(s) 1190
HaeIII GGCC 2 cut(s) 352, 746
HapII CCGG 3 cut(s) 288, 1075, 1150
HgaI GACGC 2 cut(s) 351, 578
Hin1II CATG 4 cut(s) 100, 115, 451, 1261
HincII GTYRAC 1 cut(s) 520
HindII GTYRAC 1 cut(s) 520
HindIII AAGCTT 2 cut(s) 245, 933
HinfI GANTC 5 cut(s) 196, 240, 419, 463, 1304
HpaII CCGG 3 cut(s) 288, 1075, 1150
HphI GGTGA 4 cut(s) 167, 205, 337, 1301
Hpy166II GTNNAC 1 cut(s) 520
Hpy188I TCNGA 9 cut(s) 7, 129, 405, 424, 721, 866, 1065, 1282, 1309
Hpy188III TCNNGA 9 cut(s) 14, 68, 184, 669, 890, 980, 1082, 1109, 1169
Hpy8I GTNNAC 1 cut(s) 520
Hpy99I CGWCG 1 cut(s) 308
HpyAV CCTTC 1 cut(s) 316
HpyCH4III ACNGT 2 cut(s) 630, 1206
HpyCH4V TGCA 5 cut(s) 77, 505, 614, 742, 818
HpyF10VI GCNNNNNNNGC 5 cut(s) 71, 349, 620, 689, 1017
HpyF3I CTNAG 7 cut(s) 144, 231, 479, 705, 710, 1083, 1095
Hsp92II CATG 4 cut(s) 100, 115, 451, 1261
Kzo9I GATC 7 cut(s) 124, 686, 730, 861, 882, 1078, 1116
LguI GCTCTTC 1 cut(s) 564
LmnI GCTCC 1 cut(s) 1048
Lsp1109I GCAGC 2 cut(s) 61, 489
LweI GCATC 1 cut(s) 138
MaeIII GTNAC 6 cut(s) 139, 298, 325, 590, 1177, 1200
MalI GATC 7 cut(s) 126, 688, 732, 863, 884, 1080, 1118
MboI GATC 7 cut(s) 124, 686, 730, 861, 882, 1078, 1116
MboII GAAGA 6 cut(s) 55, 551, 552, 566, 619, 865
MfeI CAATTG 2 cut(s) 294, 330
MflI RGATCY 3 cut(s) 686, 1078, 1116
MhlI GDGCHC 1 cut(s) 711
MluCI AATT 5 cut(s) 294, 330, 431, 963, 1236
MlyI GAGTC 2 cut(s) 234, 457
MmeI TCCRAC 1 cut(s) 1080
MroXI GAANNNNTTC 1 cut(s) 172
MseI TTAA 5 cut(s) 48, 60, 639, 795, 930
MslI CAYNNNNRTG 3 cut(s) 95, 446, 597
MspI CCGG 3 cut(s) 288, 1075, 1150
MspR9I CCNGG 1 cut(s) 1076
MunI CAATTG 2 cut(s) 294, 330
MvnI CGCG 1 cut(s) 123
MwoI GCNNNNNNNGC 5 cut(s) 71, 349, 620, 689, 1017
NciI CCSGG 1 cut(s) 1076
NdeII GATC 7 cut(s) 124, 686, 730, 861, 882, 1078, 1116
NlaIII CATG 4 cut(s) 100, 115, 451, 1261
NlaIV GGNNCC 3 cut(s) 91, 261, 1080
NmeAIII GCCGAG 1 cut(s) 1238
NmuCI GTSAC 4 cut(s) 325, 590, 1177, 1200
NspV TTCGAA 1 cut(s) 577
PceI AGGCCT 1 cut(s) 352
PciSI GCTCTTC 1 cut(s) 564
PcsI WCGNNNNNNNCGW 1 cut(s) 568
PdmI GAANNNNTTC 1 cut(s) 172
PfeI GAWTC 3 cut(s) 196, 419, 1304
PfoI TCCNGGA 1 cut(s) 1074
PkrI GCNGC 2 cut(s) 76, 504
PleI GAGTC 2 cut(s) 234, 457
PpsI GAGTC 2 cut(s) 234, 457
PshBI ATTAAT 1 cut(s) 639
Psp124BI GAGCTC 1 cut(s) 711
PspN4I GGNNCC 3 cut(s) 91, 261, 1080
PsrI GAACNNNNNNTAC 2 cut(s) 283, 315
PstI CTGCAG 3 cut(s) 616, 744, 820
PsuI RGATCY 3 cut(s) 686, 1078, 1116
RsaI GTAC 2 cut(s) 1015, 1148
RsaNI GTAC 2 cut(s) 1014, 1147
RseI CAYNNNNRTG 3 cut(s) 95, 446, 597
SacI GAGCTC 1 cut(s) 711
SapI GCTCTTC 1 cut(s) 564
SaqAI TTAA 5 cut(s) 48, 60, 639, 795, 930
SatI GCNGC 2 cut(s) 75, 503
Sau3AI GATC 7 cut(s) 124, 686, 730, 861, 882, 1078, 1116
SbfI CCTGCAGG 1 cut(s) 744
ScaI AGTACT 1 cut(s) 1015
SchI GAGTC 2 cut(s) 234, 457
ScrFI CCNGG 1 cut(s) 1076
SdaI CCTGCAGG 1 cut(s) 744
SduI GDGCHC 1 cut(s) 711
SfaNI GCATC 1 cut(s) 138
SfcI CTRYAG 3 cut(s) 612, 740, 816
SfuI TTCGAA 1 cut(s) 577
SmiMI CAYNNNNRTG 3 cut(s) 95, 446, 597
SmlI CTYRAG 1 cut(s) 242
SmoI CTYRAG 1 cut(s) 242
Sse8387I CCTGCAGG 1 cut(s) 744
Sse9I AATT 5 cut(s) 294, 330, 431, 963, 1236
SseBI AGGCCT 1 cut(s) 352
SsiI CCGC 4 cut(s) 121, 736, 1153, 1243
SstI GAGCTC 1 cut(s) 711
StuI AGGCCT 1 cut(s) 352
StyD4I CCNGG 1 cut(s) 1074
TaaI ACNGT 2 cut(s) 630, 1206
TaqI TCGA 3 cut(s) 577, 807, 876
TasI AATT 5 cut(s) 294, 330, 431, 963, 1236
TatI WGTACW 1 cut(s) 1013
TfiI GAWTC 3 cut(s) 196, 419, 1304
Tru1I TTAA 5 cut(s) 48, 60, 639, 795, 930
Tru9I TTAA 5 cut(s) 48, 60, 639, 795, 930
TseFI GTSAC 4 cut(s) 325, 590, 1177, 1200
TseI GCWGC 2 cut(s) 74, 502
Tsp45I GTSAC 4 cut(s) 325, 590, 1177, 1200
TspDTI ATGAA 3 cut(s) 423, 430, 832
TspGWI ACGGA 1 cut(s) 552
VspI ATTAAT 1 cut(s) 639
XapI RAATTY 2 cut(s) 431, 1236
XcmI CCANNNNNNNNNTGG 1 cut(s) 1096
XmnI GAANNNNTTC 1 cut(s) 172
ZrmI AGTACT 1 cut(s) 1015
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.