Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0001507

Physical Location & Seq

Genomic Coordinates Reverse (-)

22380863 .. 22384027

Gene Structure 3165 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G210300.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1311 bp

ATGGCAGATGGTCATGAGACTGATAAGAACATCGAGATATGGAAGATTAAGAAACTGATCAAGGCTCTTGAAGCTGCAAGGGGTAATGGAACCAGCATGATTTCTCTCATCATGCCTCCGCGGGATCAAATCTCTCGTGTTACTAAGATGCTTGGTGATGAATTTGGAACTGCTTCAAACATCAAGAGCAGGGTGAATCGTCAGTCTGTTCTTGGTGCAATTACATCTGCTCAGCAGAGGCTCAAGCTGTACAACAAGGTTCCTCCTAATGGGCTGGTGCTGTACACGGGAACAATTGTAACTGATGATGGGAAGGAAAAAAAGGTCACAATTGATTTTGAGCCTTTCAGGCCGATCAATGCGTCTCTTTACCTCTGTGACAACAAGTTTCATATTGAAGCTCTGAATGAACTCTTAGAATCTGATGACAAATTTGGTTTCATTGTCATGGATGGTAATGGGACACTTTTTGGGACATTAAGTGGCAACACTAGGGAAGTGCTTCATAAATTTAGTGTGGACCTCCCAAAGAAACACGGAAGAGGAGGGCAGTCAGCTCTACGTTTTGCTCGTCTTCGAATGGAGAAGCGCCACAACTATGTTAGGAAGACAGCAGAGCTTGCCACACAGTTCTATATTAATCCTGCCACCAGCCAGCCCAATGTTTCAGGATTAATATTGGCTGGGTCAGCTGACTTCAAGACTGAGCTTAGTCAGTCAGATATGTTTGATCCCCGTCTGCAAGCCAAAATACTGAATGTGGTGGATGTTTCTTATGGAGGGGAGAATGGTTTCAATCAGGCTATTGAGCTGTCATCCGAGATCCTGTCCAACGTGAAGTTTATACAGGAAAAGCGCTTGATAGGCAAATACTTTGAGGAGATTAGCCAGGACACAGGAAAGTATGTTTTTGGTGTGGATGACACACTAAAAGCTCTGGAGATGGGTGCTGTTGAGATTCTTATTGTGTGGGAAAGTTTGGACATCAATAGGTATGTGCTAAAAAATACCACTACTGGTGAGATTATAGTTAAACATTTCAACAAGGACCAGGAAAACAATCAGAGCAACTTCCGGGATTCTACCAACGCTGAATTAGAGGTTCAGGACAAGATGGCACTGTTGGAGTGGTTTGCTAATGAGTACAGGCGGTTTGGTTGTACTCTTGAGTTTGTCACCAACAAATCACAGGAGGGGTCACAGTTCTGCCGTGGTTTTGGTGGCATTGGAGGAATTCTTCGCTACCAGCTTGATATGAGGTCATTTGACGAGTTTTCTGACGATGGAGAAGTTTATGATGACTCTGAATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003747 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006412 GO:0006415 GO:0006518 GO:0006807 GO:0008079 GO:0008135 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009987 GO:0010467 GO:0016043 GO:0019538 GO:0022411 GO:0032984 GO:0034641 GO:0034645 GO:0043043 GO:0043170 GO:0043603 GO:0043604 GO:0043624 GO:0043933 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044424 GO:0044464 GO:0071704 GO:0071840 GO:0097159 GO:1901363 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko03015 map03015

Pfam Domains

Protein Families

eRF1_1 eRF1_2 eRF1_3

Protein Analysis

437

Amino Acids

49.14

Weight (kDa)

5.53

Isoelectric Point (pI)

37.36

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001507)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G12920 AT3G26618 AT5G47880 AT5G47880
fragaria_vesca	FvH4_2g19650 FvH4_4g22010 FvH4_4g22010 FvH4_4g22010 FvH4_4g22010
malus_domestica	MD07G1033800.v1.1 MD10G1170100.v1.1 MD13G1135000.v1.1 MD16G1130800.v1.1
prunus_persica	Prupe.1G210300_v2.0.a1 Prupe.1G210300_v2.0.a1 Prupe.1G210300_v2.0.a1 Prupe.3G315900_v2.0.a1 Prupe.3G315900_v2.0.a1 Prupe.3G315900_v2.0.a1 Prupe.3G315900_v2.0.a1 Prupe.3G315900_v2.0.a1 Prupe.3G315900_v2.0.a1
pyrus_communis	pycom07g02390 pycom13g11780 pycom16g11530
rosa_chinensis	RchiOBHm_Chr4g0428211 RchiOBHm_Chr6g0253761 RchiOBHm_Chr6g0285401
rosa_laevigata	RLG00000007169 RLG00000012645 RLG00000014986
rosa_multiflora	Rmu_co8434751.1_g000001 Rmu_sc0001351.1_g000012 Rmu_sc0001351.1_g000013 Rmu_sc0006662.1_g000018 Rmu_sc0012535.1_g000001
rosa_roxburghii	Rroxscaffold_5G00369930 Rroxscaffold_7G00183260
rosa_rugosa	Rorug04G0223700 Rorug04G0223800 Rorug05G0546100 Rorug06G0174100
rosa_samantha	Rh4AG280900 Rh4BG286400 Rh4CG302100 Rh4DG283400 Rh6BG286500 Rh6CG287600
rosa_wichuraiana	Rw4G024400 Rw6G005490 Rw6G024510

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccII	CGCG	1 cut(s)	121
AciI	CCGC	3 cut(s)	119, 121, 1150
AclWI	GGATC	3 cut(s)	132, 725, 817
AcsI	RAATTY	4 cut(s)	161, 431, 509, 1233
AfaI	GTAC	4 cut(s)	251, 284, 1145, 1162
AfeI	AGCGCT	1 cut(s)	857
AfiI	CCNNNNNNNGG	1 cut(s)	269
AgsI	TTSAA	6 cut(s)	71, 177, 398, 700, 796, 1042
AjnI	CCWGG	2 cut(s)	888, 1050
Alw26I	GTCTC	2 cut(s)	11, 369
AlwI	GGATC	3 cut(s)	132, 725, 817
Aor51HI	AGCGCT	1 cut(s)	857
AoxI	GGCC	1 cut(s)	350
ApeKI	GCWGC	1 cut(s)	74
ApoI	RAATTY	4 cut(s)	161, 431, 509, 1233
AseI	ATTAAT	2 cut(s)	639, 674
Asp700I	GAANNNNTTC	3 cut(s)	172, 501, 791
AspLEI	GCGC	2 cut(s)	591, 858
AspS9I	GGNCC	2 cut(s)	520, 1048
AsuC2I	CCSGG	1 cut(s)	1076
AsuHPI	GGTGA	4 cut(s)	167, 205, 1031, 1168
AsuII	TTCGAA	1 cut(s)	577
AvaII	GGWCC	2 cut(s)	520, 1048
BauI	CACGAG	1 cut(s)	135
BbsI	GAAGAC	2 cut(s)	566, 614
BbvI	GCAGC	1 cut(s)	61
BccI	CCATC	6 cut(s)	2, 302, 446, 937, 1108, 1277
BceAI	ACGGC	1 cut(s)	1194
BciT130I	CCWGG	2 cut(s)	890, 1052
BclI	TGATCA	1 cut(s)	57
BcnI	CCSGG	1 cut(s)	1076
BcoDI	GTCTC	2 cut(s)	11, 369
BfaI	CTAG	1 cut(s)	492
BfoI	RGCGCY	2 cut(s)	592, 859
BglI	GCCNNNNNGGC	1 cut(s)	349
BisI	GCNGC	1 cut(s)	75
BlpI	GCTNAGC	1 cut(s)	231
BlsI	GCNGC	1 cut(s)	76
Bme1390I	CCNGG	3 cut(s)	890, 1052, 1076
Bme18I	GGWCC	2 cut(s)	520, 1048
BmgT120I	GGNCC	2 cut(s)	520, 1048
BmiI	GGNNCC	2 cut(s)	91, 261
BmrFI	CCNGG	3 cut(s)	890, 1052, 1076
BmsI	GCATC	1 cut(s)	138
BpiI	GAAGAC	2 cut(s)	566, 614
BpmI	CTGGAG	1 cut(s)	959
Bpu1102I	GCTNAGC	1 cut(s)	231
Bpu14I	TTCGAA	1 cut(s)	577
BpuEI	CTTGAG	2 cut(s)	227, 1187
BpuMI	CCSGG	1 cut(s)	1076
BsaJI	CCNNGG	2 cut(s)	119, 1210
Bsc4I	CCNNNNNNNGG	1 cut(s)	269
Bse1I	ACTGG	1 cut(s)	1021
BseBI	CCWGG	2 cut(s)	890, 1052
BseDI	CCNNGG	2 cut(s)	119, 1210
BseGI	GGATG	4 cut(s)	457, 772, 815, 925
BseLI	CCNNNNNNNGG	1 cut(s)	269
BseMII	CTCAG	2 cut(s)	245, 696
BseNI	ACTGG	1 cut(s)	1021
BseRI	GAGGAG	2 cut(s)	558, 893
BseXI	GCAGC	1 cut(s)	61
BseYI	CCCAGC	1 cut(s)	683
Bsh1236I	CGCG	1 cut(s)	121
BshFI	GGCC	1 cut(s)	352
BsiSI	CCGG	1 cut(s)	1075
BslFI	GGGAC	2 cut(s)	475, 487
BslI	CCNNNNNNNGG	1 cut(s)	269
BsmAI	GTCTC	2 cut(s)	11, 369
BsmBI	CGTCTC	1 cut(s)	369
BsmFI	GGGAC	2 cut(s)	475, 487
BsnI	GGCC	1 cut(s)	352
Bsp119I	TTCGAA	1 cut(s)	577
Bsp1407I	TGTACA	2 cut(s)	249, 282
Bsp143I	GATC	5 cut(s)	57, 124, 354, 730, 822
Bsp1720I	GCTNAGC	1 cut(s)	231
BspACI	CCGC	3 cut(s)	119, 121, 1150
BspANI	GGCC	1 cut(s)	352
BspCNI	CTCAG	2 cut(s)	244, 697
BspFNI	CGCG	1 cut(s)	121
BspHI	TCATGA	1 cut(s)	13
BspLI	GGNNCC	2 cut(s)	91, 261
BspPI	GGATC	3 cut(s)	132, 725, 817
BspT104I	TTCGAA	1 cut(s)	577
BsrGI	TGTACA	2 cut(s)	249, 282
BsrI	ACTGG	1 cut(s)	1021
BssECI	CCNNGG	2 cut(s)	119, 1210
BssMI	GATC	5 cut(s)	57, 124, 354, 730, 822
BssSI	CACGAG	1 cut(s)	135
Bst2BI	CACGAG	1 cut(s)	135
Bst2UI	CCWGG	2 cut(s)	890, 1052
Bst4CI	ACNGT	3 cut(s)	630, 1122, 1203
Bst6I	CTCTTC	1 cut(s)	535
BstAPI	GCANNNNNTGC	1 cut(s)	620
BstAUI	TGTACA	2 cut(s)	249, 282
BstBI	TTCGAA	1 cut(s)	577
BstC8I	GCNNGC	3 cut(s)	621, 656, 744
BstDEI	CTNAG	5 cut(s)	144, 231, 415, 705, 710
BstDSI	CCRYGG	2 cut(s)	119, 1210
BstF5I	GGATG	4 cut(s)	457, 772, 815, 925
BstFNI	CGCG	1 cut(s)	121
BstH2I	RGCGCY	2 cut(s)	592, 859
BstHHI	GCGC	2 cut(s)	591, 858
BstKTI	GATC	5 cut(s)	60, 127, 357, 733, 825
BstMAI	GTCTC	2 cut(s)	11, 369
BstMBI	GATC	5 cut(s)	57, 124, 354, 730, 822
BstMWI	GCNNNNNNNGC	5 cut(s)	71, 349, 620, 689, 864
BstNI	CCWGG	2 cut(s)	890, 1052
BstSCI	CCNGG	3 cut(s)	888, 1050, 1074
BstUI	CGCG	1 cut(s)	121
BstV1I	GCAGC	1 cut(s)	61
BstV2I	GAAGAC	2 cut(s)	566, 614
BstX2I	RGATCY	1 cut(s)	822
BstYI	RGATCY	1 cut(s)	822
BsuRI	GGCC	1 cut(s)	352
BtgI	CCRYGG	2 cut(s)	119, 1210
BtsCI	GGATG	4 cut(s)	457, 772, 815, 925
BtsIMutI	CAGTG	1 cut(s)	1118
Cac8I	GCNNGC	3 cut(s)	621, 656, 744
CciI	TCATGA	1 cut(s)	13
CfoI	GCGC	2 cut(s)	591, 858
Cfr13I	GGNCC	2 cut(s)	520, 1048
Cfr42I	CCGCGG	1 cut(s)	122
CseI	GACGC	1 cut(s)	351
Csp6I	GTAC	4 cut(s)	250, 283, 1144, 1161
CviAII	CATG	4 cut(s)	14, 97, 112, 448
CviQI	GTAC	4 cut(s)	250, 283, 1144, 1161
DdeI	CTNAG	5 cut(s)	144, 231, 415, 705, 710
DpnI	GATC	5 cut(s)	59, 126, 356, 732, 824
DpnII	GATC	5 cut(s)	57, 124, 354, 730, 822
Eam1104I	CTCTTC	1 cut(s)	535
EarI	CTCTTC	1 cut(s)	535
Eco47I	GGWCC	2 cut(s)	520, 1048
Eco47III	AGCGCT	1 cut(s)	857
EcoRI	GAATTC	1 cut(s)	1233
EcoRII	CCWGG	2 cut(s)	888, 1050
Esp3I	CGTCTC	1 cut(s)	369
FaeI	CATG	4 cut(s)	17, 100, 115, 451
FaqI	GGGAC	2 cut(s)	475, 487
FatI	CATG	4 cut(s)	13, 96, 111, 447
FauI	CCCGC	1 cut(s)	114
FbaI	TGATCA	1 cut(s)	57
Fnu4HI	GCNGC	1 cut(s)	75
FokI	GGATG	4 cut(s)	464, 779, 802, 932
Fsp4HI	GCNGC	1 cut(s)	75
FspBI	CTAG	1 cut(s)	492
GlaI	GCGC	2 cut(s)	590, 857
GluI	GCNGC	1 cut(s)	75
GsaI	CCCAGC	1 cut(s)	687
GsuI	CTGGAG	1 cut(s)	959
HaeII	RGCGCY	2 cut(s)	592, 859
HaeIII	GGCC	1 cut(s)	352
HapII	CCGG	1 cut(s)	1075
HgaI	GACGC	1 cut(s)	351
HhaI	GCGC	2 cut(s)	591, 858
Hin1II	CATG	4 cut(s)	17, 100, 115, 451
Hin6I	GCGC	2 cut(s)	589, 856
HinP1I	GCGC	2 cut(s)	589, 856
HinfI	GANTC	5 cut(s)	196, 419, 958, 1079, 1301
HpaII	CCGG	1 cut(s)	1075
HphI	GGTGA	4 cut(s)	167, 205, 1031, 1168
Hpy166II	GTNNAC	2 cut(s)	285, 520
Hpy188I	TCNGA	7 cut(s)	405, 424, 721, 820, 1065, 1279, 1306
Hpy188III	TCNNGA	9 cut(s)	14, 34, 68, 184, 669, 700, 938, 1106, 1166
Hpy8I	GTNNAC	2 cut(s)	285, 520
HpyAV	CCTTC	1 cut(s)	307
HpyCH4III	ACNGT	3 cut(s)	630, 1122, 1203
HpyCH4IV	ACGT	2 cut(s)	562, 834
HpyCH4V	TGCA	3 cut(s)	77, 218, 742
HpyF10VI	GCNNNNNNNGC	5 cut(s)	71, 349, 620, 689, 864
HpyF3I	CTNAG	5 cut(s)	144, 231, 415, 705, 710
HpySE526I	ACGT	2 cut(s)	562, 834
Hsp92II	CATG	4 cut(s)	17, 100, 115, 451
HspAI	GCGC	2 cut(s)	589, 856
Ksp22I	TGATCA	1 cut(s)	57
KspI	CCGCGG	1 cut(s)	122
Kzo9I	GATC	5 cut(s)	57, 124, 354, 730, 822
Lsp1109I	GCAGC	1 cut(s)	61
LweI	GCATC	1 cut(s)	138
MaeI	CTAG	1 cut(s)	492
MaeII	ACGT	2 cut(s)	562, 834
MaeIII	GTNAC	6 cut(s)	139, 298, 325, 377, 1174, 1197
MalI	GATC	5 cut(s)	59, 126, 356, 732, 824
MboI	GATC	5 cut(s)	57, 124, 354, 730, 822
MboII	GAAGA	5 cut(s)	55, 552, 566, 619, 1229
MfeI	CAATTG	2 cut(s)	294, 330
MflI	RGATCY	1 cut(s)	822
MluCI	AATT	8 cut(s)	161, 219, 294, 330, 431, 509, 1094, 1233
MlyI	GAGTC	1 cut(s)	1295
MmeI	TCCRAC	2 cut(s)	855, 1104
MroXI	GAANNNNTTC	3 cut(s)	172, 501, 791
MseI	TTAA	5 cut(s)	48, 479, 639, 674, 1032
MslI	CAYNNNNRTG	2 cut(s)	446, 597
MspA1I	CMGCKG	2 cut(s)	121, 692
MspI	CCGG	1 cut(s)	1075
MspR9I	CCNGG	3 cut(s)	890, 1052, 1076
MunI	CAATTG	2 cut(s)	294, 330
MvaI	CCWGG	2 cut(s)	890, 1052
MvnI	CGCG	1 cut(s)	121
MwoI	GCNNNNNNNGC	5 cut(s)	71, 349, 620, 689, 864
NciI	CCSGG	1 cut(s)	1076
NdeII	GATC	5 cut(s)	57, 124, 354, 730, 822
NlaIII	CATG	4 cut(s)	17, 100, 115, 451
NlaIV	GGNNCC	2 cut(s)	91, 261
NmuCI	GTSAC	4 cut(s)	325, 377, 1174, 1197
NspV	TTCGAA	1 cut(s)	577
PagI	TCATGA	1 cut(s)	13
PcsI	WCGNNNNNNNCGW	1 cut(s)	568
PdmI	GAANNNNTTC	3 cut(s)	172, 501, 791
PfeI	GAWTC	4 cut(s)	196, 419, 958, 1079
PfoI	TCCNGGA	1 cut(s)	1074
PkrI	GCNGC	1 cut(s)	76
PleI	GAGTC	1 cut(s)	1295
PpsI	GAGTC	1 cut(s)	1295
PshBI	ATTAAT	2 cut(s)	639, 674
Psp6I	CCWGG	2 cut(s)	888, 1050
PspFI	CCCAGC	1 cut(s)	683
PspGI	CCWGG	2 cut(s)	888, 1050
PspN4I	GGNNCC	2 cut(s)	91, 261
PspPI	GGNCC	2 cut(s)	520, 1048
PsuI	RGATCY	1 cut(s)	822
PvuII	CAGCTG	1 cut(s)	692
RsaI	GTAC	4 cut(s)	251, 284, 1145, 1162
RsaNI	GTAC	4 cut(s)	250, 283, 1144, 1161
RseI	CAYNNNNRTG	2 cut(s)	446, 597
SacII	CCGCGG	1 cut(s)	122
SaqAI	TTAA	5 cut(s)	48, 479, 639, 674, 1032
SatI	GCNGC	1 cut(s)	75
Sau3AI	GATC	5 cut(s)	57, 124, 354, 730, 822
Sau96I	GGNCC	2 cut(s)	520, 1048
SchI	GAGTC	1 cut(s)	1295
ScrFI	CCNGG	3 cut(s)	890, 1052, 1076
SfaNI	GCATC	1 cut(s)	138
Sfr303I	CCGCGG	1 cut(s)	122
SfuI	TTCGAA	1 cut(s)	577
SgrBI	CCGCGG	1 cut(s)	122
SinI	GGWCC	2 cut(s)	520, 1048
SmiMI	CAYNNNNRTG	2 cut(s)	446, 597
SmlI	CTYRAG	2 cut(s)	242, 1166
SmoI	CTYRAG	2 cut(s)	242, 1166
Sse9I	AATT	8 cut(s)	161, 219, 294, 330, 431, 509, 1094, 1233
SsiI	CCGC	3 cut(s)	119, 121, 1150
SspI	AATATT	1 cut(s)	678
SspMI	CTAG	1 cut(s)	492
StyD4I	CCNGG	3 cut(s)	888, 1050, 1074
TaaI	ACNGT	3 cut(s)	630, 1122, 1203
TaiI	ACGT	2 cut(s)	565, 837
TaqI	TCGA	2 cut(s)	33, 577
TasI	AATT	8 cut(s)	161, 219, 294, 330, 431, 509, 1094, 1233
TatI	WGTACW	4 cut(s)	249, 282, 1143, 1160
TfiI	GAWTC	4 cut(s)	196, 419, 958, 1079
Tru1I	TTAA	5 cut(s)	48, 479, 639, 674, 1032
Tru9I	TTAA	5 cut(s)	48, 479, 639, 674, 1032
TscAI	CASTG	1 cut(s)	1125
TseFI	GTSAC	4 cut(s)	325, 377, 1174, 1197
TseI	GCWGC	1 cut(s)	74
Tsp45I	GTSAC	4 cut(s)	325, 377, 1174, 1197
TspDTI	ATGAA	5 cut(s)	174, 380, 423, 430, 494
TspGWI	ACGGA	1 cut(s)	552
TspRI	CASTG	1 cut(s)	1125
VpaK11BI	GGWCC	2 cut(s)	520, 1048
VspI	ATTAAT	2 cut(s)	639, 674
XapI	RAATTY	4 cut(s)	161, 431, 509, 1233
XmnI	GAANNNNTTC	3 cut(s)	172, 501, 791
XspI	CTAG	1 cut(s)	492

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.