Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb4

Orthogroup ID

OG0001845

Physical Location & Seq

Genomic Coordinates Reverse (-)

31652806 .. 31655801

Gene Structure 2996 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_4g33441.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2295 bp

ATGTACATGGAATGCAAGCGGATTCCTCAGTCACCAGCTATATCCTTAGATGAGGGCTTTTTCTATGTACACAGGGTTCTGATTACACCAACTAAAGTATACTTCTGTGGTCCAGAGGTAAATCTCTCCAATCGTGTCTTAAGAAACTATCCTGAAGATATTGACAATTTTCTTCGAATTTCTTTCGTTGATGAGGACTTGGGGAAGATGAGGTCTGTAGATTTGTGTCCGCGGACATGTTGTGAAGAAGAGGAAAGAAGAACTAGAGTTTATGAAAGGATACTTTCTGTTCTAAGAGATGGGATAGTGATTGGTGAGAAGAAGTTTGAGCTTCTGGCATTTTCGGGTAGTCAGTTGCGAGAGAATTCTGCATGGATGTTTGCTTCCAGAAGGGGCCTTACTGCACAAGGGATAAGAGACTGGATGGGAGAGTTTAGTCACATAAAAAATGTGTCTAAATATGGTGCCAGGCTTGGTCAGTCTTTCAGCTCATCCAGGGAGACTTTTAGTGTTGGATCGGATGAAATTGAAGTCATTCCTGATGTGGAAATTGAAAGAGGCGGAACCAAATATTGCTTCTCTGATGGAATTGGGAAGATGTCTGCTGATTTTGCTGAAAGAGTGGCAAGAAAATGTGGGAAAAGTTCTACTCCATCCGCCTTTCAAATCCGCTATGGTGGCTATAAAGGTGTTGTGGCAGTTGATCCAACATTGTCAAAGAAGCTGGCATTGAGAAACAGCATGTGCAAGTTCAAATCACTCAACACAATGTTAGATGTCATATCATGGACCAAGTACCAGCCTTGTTTCCTCAATCGTCAACTGATCACCCTTTTGTCCACCCTTGGAGTTAGGGATCGTGTTTTTGAGAAGAAGCAGAATCAAGCAATGGATCAGTTGGAAGGGATTCTAAATGATCCGCTGAAAGCACAGGAGGCACTGGGATTGATGTTTCAAGGAGAGGCCACCAACATTTTAAAGGAAATGCTGAATTGTTACAAGCCAAATGCAGAGCCGTTTCTCTCATTGATGCTGCAGTCATTATGTGCATCAAAACTTGCCGAACTTCGGACCAAAACACGGATTTTTGTTCACAAAGGAAGATCTCTGATGGGATGTCTGGATGAAACTGGGACATTGGAATATGGTCAGGTATTTGTGCAATGTTCTCACCATACTATCTTCACTGGCAACAACACAACCTCAACTGCAAGCCAAGGCAATTTTACTGTTGAGGGTAAAGTAGTTGTTGCTAAAAACCCCTGTCTACACCCTGGAGATGTGCGTGTTCTTATGGCTGTGGACGTGCCGGCGCTACACCACATGCTGGATTGTGTTGTGTTCCCACAAAAAGGAAAGAGGCCTCATCCTAATGAATGCTCAGGCAGTGATTTAGATGGAGATGATTATTTTGTTAGCTGGGATCATGAACTGATTCCTCCTCGGCAAACTAATCCGATGAACTATACTCCAGCACCAACTGTGGAATTGGATCACGATGTTACGATTGAGGAAGTCGCGGAGTCTTTTACCAACTACATTGTAAATGACAGCTTGGGCATCATTTCAAATGCACATCTTGTCACTTCAGATACTGAACCACATAAGGCTATGAGCTATAAAAGTGTTAAGCTCGCCGAGCTCCACTCTCATGCTGTTGACTCTCCTAAAACTGGTGCGATAGTGAAACTGCCGCCTAGTCTGCGCGTAAAAGCTTACCCAGATTTCATGGAAAAGACGGACCGATCCACCTACGAGTCCAAGCGTGTGATTGGGAAGCTTTACCGACAGGTGAAAGATATTGCGCTAGGATCACATTCACACTCTTTTAAGTCCTTTACCAGGGAAGTGGCTAGGAGGTTTTATGATCCTGACATGGAGGTAGATGGATTCAAAGATTACATCGATGATGCCATGAGATACAAAAGTGAGTATGACGACAAGCTGGGAAAGCTGATGGACTATTATGGTATTAAAACTGAAGCTGAAATACTGAGTGGAAACATCACCAATGTATCAAAGTTCTTCAACAAGAGAAAGGACCCGGAGTCGATTAACTGTGCTGTGAGGTCACTGAAGAAGGAAGCAAGGGCATGGTTTTTCGAGAAGCCAACTAGTGGTGATCCATCGGATTTTGGAACTGACATCAGTATGTATGCGGCAAAAGCATCAGCATGGTACCATGTTACATATCATCATCGTTACTGGGGTTGCTACAACAAGGGTATGGCAAGAGACCATTTCCTGAGTTTTCCATGGTGTGTGTTCGACATGCTCATCCAAATCAAGAAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0006139 GO:0006396 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009605 GO:0009607 GO:0009615 GO:0009719 GO:0009725 GO:0009751 GO:0009892 GO:0009987 GO:0010025 GO:0010033 GO:0010166 GO:0010467 GO:0010468 GO:0010605 GO:0010608 GO:0010629 GO:0014070 GO:0016070 GO:0016246 GO:0016441 GO:0016458 GO:0019222 GO:0030422 GO:0031047 GO:0031050 GO:0034641 GO:0035194 GO:0040029 GO:0042221 GO:0042493 GO:0043170 GO:0043207 GO:0043331 GO:0044237 GO:0044238 GO:0046483 GO:0046677 GO:0048518 GO:0048519 GO:0048522 GO:0050789 GO:0050794 GO:0050896 GO:0051704 GO:0051707 GO:0051716 GO:0060147 GO:0060148 GO:0060255 GO:0060968 GO:0065007 GO:0070887 GO:0070918 GO:0071310 GO:0071359 GO:0071407 GO:0071704 GO:0090304 GO:1901360 GO:1901568 GO:1901570 GO:1901576 GO:1901698 GO:1901699 GO:1901700

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

RdRP

Protein Analysis

765

Amino Acids

86.73

Weight (kDa)

7.96

Isoelectric Point (pI)

35.55

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RdRP	PF05183	28 - 598	3.4e-194	RNA dependent RNA polymerase
RdRP_head	PF26253	622 - 764	4.7e-43	RdRP, head domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001845)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_4g13760 FvH4_4g33441 FvH4_4g33445
malus_domestica	MD13G1019400.v1.1 MD13G1041200.v1.1 MD16G1017600.v1.1
prunus_persica	Prupe.1G132100_v2.0.a1 Prupe.1G132200_v2.0.a1 Prupe.1G132200_v2.0.a1 Prupe.1G332600_v2.0.a1 Prupe.1G332600_v2.0.a1 Prupe.1G332600_v2.0.a1 Prupe.1G334500_v2.0.a1 Prupe.1G334500_v2.0.a1 Prupe.1G334500_v2.0.a1
pyrus_communis	pycom13g01650 pycom13g03550
rosa_chinensis	RchiOBHm_Chr2g0166231 RchiOBHm_Chr4g0442711 RchiOBHm_Chr4g0442751
rosa_laevigata	RLG00000005987 RLG00000005988 RLG00000005989 RLG00000021600
rosa_multiflora	Rmu_co8517261.1_g000001 Rmu_sc0018648.1_g000004 Rmu_sc0035717.1_g000001 Rmu_ssc0000204.1_g000023
rosa_roxburghii	Rroxscaffold_2G00085060 Rroxscaffold_5G00383520 Rroxscaffold_5G00383530 Rroxscaffold_5G00383540
rosa_rugosa	Rorug02G0521500 Rorug02G0521600
rosa_samantha	Rh2AG587500 Rh2BG599400 Rh2CG569900 Rh2DG609500 Rh4AG395000 Rh4AG395300 Rh4BG408000 Rh4CG423700 Rh4DG402000 Rh4DG402200
rosa_wichuraiana	Rw2G048970 Rw4G034140 Rw4G034160

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	2178
AccB1I	GGYRCC	2 cut(s)	464, 2178
AccB7I	CCANNNNNTGG	2 cut(s)	1327, 2117
AccI	GTMKAC	2 cut(s)	99, 1267
AccII	CGCG	3 cut(s)	232, 1520, 1707
AcsI	RAATTY	2 cut(s)	177, 364
AcuI	CTGAAG	4 cut(s)	174, 1572, 2001, 2096
AfaI	GTAC	4 cut(s)	5, 69, 797, 2180
AfiI	CCNNNNNNNGG	7 cut(s)	1068, 1080, 1327, 1352, 1673, 1842, 2117
AflII	CTTAAG	1 cut(s)	139
AflIII	ACRYGT	1 cut(s)	236
AgsI	TTSAA	8 cut(s)	530, 554, 665, 754, 956, 1569, 1894, 2029
AhdI	GACNNNNNGTC	1 cut(s)	2047
AhlI	ACTAGT	1 cut(s)	2114
AjiI	CACGTC	1 cut(s)	1306
AjnI	CCWGG	4 cut(s)	467, 494, 1273, 1841
AjuI	GAANNNNNNNTTGG	2 cut(s)	560, 592
Alw21I	GWGCWC	1 cut(s)	1644
Alw26I	GTCTC	3 cut(s)	411, 494, 2229
AlwNI	CAGNNNCTG	1 cut(s)	1595
AoxI	GGCC	3 cut(s)	394, 963, 1361
ApeKI	GCWGC	1 cut(s)	1033
ApoI	RAATTY	2 cut(s)	177, 364
Asp700I	GAANNNNTTC	3 cut(s)	534, 906, 1434
Asp718I	GGTACC	1 cut(s)	2178
AspLEI	GCGC	3 cut(s)	1315, 1707, 1807
AspS9I	GGNCC	6 cut(s)	110, 394, 789, 1071, 1741, 2041
AsuC2I	CCSGG	1 cut(s)	2045
AsuHPI	GGTGA	7 cut(s)	24, 326, 820, 1163, 1804, 1999, 2132
AsuII	TTCGAA	1 cut(s)	175
AvaII	GGWCC	5 cut(s)	110, 789, 1071, 1741, 2041
BaeI	ACNNNNGTAYC	4 cut(s)	1912, 1945, 1998, 2031
BanI	GGYRCC	2 cut(s)	464, 2178
BanII	GRGCYC	1 cut(s)	1644
BarI	GAAGNNNNNNTAC	4 cut(s)	382, 414, 1974, 2006
Bbv12I	GWGCWC	1 cut(s)	1644
BbvI	GCAGC	1 cut(s)	1020
BccI	CCATC	9 cut(s)	293, 418, 578, 661, 1105, 1391, 1880, 1951, 2134
BceAI	ACGGC	1 cut(s)	1000
BciT130I	CCWGG	4 cut(s)	469, 496, 1275, 1843
BciVI	GTATCC	1 cut(s)	273
BclI	TGATCA	1 cut(s)	825
BcnI	CCSGG	1 cut(s)	2045
BcoDI	GTCTC	3 cut(s)	411, 494, 2229
BcuI	ACTAGT	1 cut(s)	2114
BfaI	CTAG	5 cut(s)	264, 1698, 1808, 1854, 2115
BfmI	CTRYAG	2 cut(s)	216, 1034
BfoI	RGCGCY	1 cut(s)	1316
BfrI	CTTAAG	1 cut(s)	139
BfuI	GTATCC	1 cut(s)	273
BglII	AGATCT	1 cut(s)	1103
BisI	GCNGC	3 cut(s)	1034, 1694, 2160
BlsI	GCNGC	3 cut(s)	1035, 1695, 2161
Bme1390I	CCNGG	5 cut(s)	469, 496, 1275, 1843, 2045
Bme18I	GGWCC	5 cut(s)	110, 789, 1071, 1741, 2041
BmeRI	GACNNNNNGTC	1 cut(s)	2047
BmgBI	CACGTC	1 cut(s)	1306
BmgT120I	GGNCC	6 cut(s)	110, 394, 789, 1071, 1741, 2041
BmiI	GGNNCC	5 cut(s)	395, 466, 565, 2043, 2180
BmrFI	CCNGG	5 cut(s)	469, 496, 1275, 1843, 2045
BmrI	ACTGGG	3 cut(s)	950, 1140, 2215
BmsI	GCATC	5 cut(s)	1020, 1058, 1569, 1900, 2177
BmuI	ACTGGG	3 cut(s)	950, 1140, 2215
BplI	GAGNNNNNCTC	2 cut(s)	1631, 1663
BpmI	CTGGAG	2 cut(s)	1296, 1455
Bpu10I	CCTNAGC	1 cut(s)	1381
Bpu14I	TTCGAA	1 cut(s)	175
BpuMI	CCSGG	1 cut(s)	2045
Bsa29I	ATCGAT	1 cut(s)	1905
BsaI	GGTCTC	1 cut(s)	2229
BsaJI	CCNNGG	8 cut(s)	230, 495, 844, 1216, 1273, 1442, 1842, 2255
Bsc4I	CCNNNNNNNGG	7 cut(s)	1068, 1080, 1327, 1352, 1673, 1842, 2117
Bse118I	RCCGGY	1 cut(s)	1309
Bse1I	ACTGG	6 cut(s)	425, 945, 1135, 1192, 1678, 2210
Bse3DI	GCAATG	2 cut(s)	894, 1169
BseBI	CCWGG	4 cut(s)	469, 496, 1275, 1843
BseCI	ATCGAT	1 cut(s)	1905
BseDI	CCNNGG	8 cut(s)	230, 495, 844, 1216, 1273, 1442, 1842, 2255
BseGI	GGATG	9 cut(s)	381, 429, 491, 526, 653, 1121, 1129, 1366, 2277
BseLI	CCNNNNNNNGG	7 cut(s)	1068, 1080, 1327, 1352, 1673, 1842, 2117
BseMI	GCAATG	2 cut(s)	894, 1169
BseMII	CTCAG	4 cut(s)	41, 1395, 1985, 2237
BseNI	ACTGG	6 cut(s)	425, 945, 1135, 1192, 1678, 2210
BseRI	GAGGAG	1 cut(s)	1431
BseXI	GCAGC	1 cut(s)	1020
BseYI	CCCAGC	2 cut(s)	1419, 1945
BsgI	GTGCAG	1 cut(s)	387
Bsh1236I	CGCG	3 cut(s)	232, 1520, 1707
BshFI	GGCC	3 cut(s)	396, 965, 1363
BshNI	GGYRCC	2 cut(s)	464, 2178
BshVI	ATCGAT	1 cut(s)	1905
BsiHKAI	GWGCWC	1 cut(s)	1644
BsiSI	CCGG	2 cut(s)	1310, 2045
BslFI	GGGAC	1 cut(s)	1147
BslI	CCNNNNNNNGG	7 cut(s)	1068, 1080, 1327, 1352, 1673, 1842, 2117
BsmAI	GTCTC	3 cut(s)	411, 494, 2229
BsmFI	GGGAC	1 cut(s)	1147
BsmI	GAATGC	2 cut(s)	17, 1382
BsnI	GGCC	3 cut(s)	396, 965, 1363
Bso31I	GGTCTC	1 cut(s)	2229
Bsp119I	TTCGAA	1 cut(s)	175
Bsp1286I	GDGCHC	1 cut(s)	1644
Bsp1407I	TGTACA	2 cut(s)	3, 67
Bsp19I	CCATGG	1 cut(s)	2255
BspANI	GGCC	3 cut(s)	396, 965, 1363
BspCNI	CTCAG	4 cut(s)	40, 1394, 1986, 2238
BspDI	ATCGAT	1 cut(s)	1905
BspFNI	CGCG	3 cut(s)	232, 1520, 1707
BspHI	TCATGA	1 cut(s)	1426
BspLI	GGNNCC	5 cut(s)	395, 466, 565, 2043, 2180
BspMAI	CTGCAG	1 cut(s)	1038
BspT104I	TTCGAA	1 cut(s)	175
BspT107I	GGYRCC	2 cut(s)	464, 2178
BspTI	CTTAAG	1 cut(s)	139
BspTNI	GGTCTC	1 cut(s)	2229
BsrDI	GCAATG	2 cut(s)	894, 1169
BsrFI	RCCGGY	1 cut(s)	1309
BsrGI	TGTACA	2 cut(s)	3, 67
BsrI	ACTGG	6 cut(s)	425, 945, 1135, 1192, 1678, 2210
BssAI	RCCGGY	1 cut(s)	1309
BssECI	CCNNGG	8 cut(s)	230, 495, 844, 1216, 1273, 1442, 1842, 2255
BssNAI	GTATAC	1 cut(s)	100
BssT1I	CCWWGG	3 cut(s)	844, 1216, 2255
Bst1107I	GTATAC	1 cut(s)	100
Bst2UI	CCWGG	4 cut(s)	469, 496, 1275, 1843
Bst4CI	ACNGT	3 cut(s)	1231, 1483, 2060
Bst6I	CTCTTC	1 cut(s)	243
BstAFI	CTTAAG	1 cut(s)	139
BstAUI	TGTACA	2 cut(s)	3, 67
BstBI	TTCGAA	1 cut(s)	175
BstC8I	GCNNGC	5 cut(s)	17, 726, 1213, 1311, 1635
BstDEI	CTNAG	6 cut(s)	27, 46, 293, 1381, 1994, 2246
BstDSI	CCRYGG	2 cut(s)	230, 2255
BstENI	CCTNNNNNAGG	1 cut(s)	1840
BstF5I	GGATG	9 cut(s)	381, 429, 491, 526, 653, 1121, 1129, 1366, 2277
BstFNI	CGCG	3 cut(s)	232, 1520, 1707
BstH2I	RGCGCY	1 cut(s)	1316
BstHHI	GCGC	3 cut(s)	1315, 1707, 1807
BstMAI	GTCTC	3 cut(s)	411, 494, 2229
BstMWI	GCNNNNNNNGC	7 cut(s)	611, 678, 935, 1639, 1702, 1951, 2165
BstNI	CCWGG	4 cut(s)	469, 496, 1275, 1843
BstNSI	RCATGY	4 cut(s)	240, 745, 1327, 2275
BstSCI	CCNGG	5 cut(s)	467, 494, 1273, 1841, 2043
BstSFI	CTRYAG	2 cut(s)	216, 1034
BstUI	CGCG	3 cut(s)	232, 1520, 1707
BstV1I	GCAGC	1 cut(s)	1020
BstX2I	RGATCY	1 cut(s)	1103
BstXI	CCANNNNNNTGG	1 cut(s)	1849
BstYI	RGATCY	1 cut(s)	1103
BstZ17I	GTATAC	1 cut(s)	100
Bsu15I	ATCGAT	1 cut(s)	1905
BsuI	GTATCC	1 cut(s)	273
BsuRI	GGCC	3 cut(s)	396, 965, 1363
BsuTUI	ATCGAT	1 cut(s)	1905
BtgI	CCRYGG	2 cut(s)	230, 2255
BtrI	CACGTC	1 cut(s)	1306
BtsCI	GGATG	9 cut(s)	381, 429, 491, 526, 653, 1121, 1129, 1366, 2277
BtsI	GCAGTG	1 cut(s)	1393
BtsIMutI	CAGTG	4 cut(s)	938, 1185, 1393, 2072
Cac8I	GCNNGC	5 cut(s)	17, 726, 1213, 1311, 1635
CaiI	CAGNNNCTG	1 cut(s)	1595
CciI	TCATGA	1 cut(s)	1426
CfoI	GCGC	3 cut(s)	1315, 1707, 1807
Cfr10I	RCCGGY	1 cut(s)	1309
Cfr13I	GGNCC	6 cut(s)	110, 394, 789, 1071, 1741, 2041
Cfr42I	CCGCGG	1 cut(s)	233
ClaI	ATCGAT	1 cut(s)	1905
CpoI	CGGWCCG	1 cut(s)	1741
Csp6I	GTAC	4 cut(s)	4, 68, 796, 2179
CspI	CGGWCCG	1 cut(s)	1741
CviQI	GTAC	4 cut(s)	4, 68, 796, 2179
DdeI	CTNAG	6 cut(s)	27, 46, 293, 1381, 1994, 2246
DraI	TTTAAA	1 cut(s)	978
DriI	GACNNNNNGTC	1 cut(s)	2047
Eam1104I	CTCTTC	1 cut(s)	243
Eam1105I	GACNNNNNGTC	1 cut(s)	2047
EarI	CTCTTC	1 cut(s)	243
EciI	GGCGGA	2 cut(s)	576, 646
Ecl136II	GAGCTC	1 cut(s)	1642
Eco130I	CCWWGG	3 cut(s)	844, 1216, 2255
Eco147I	AGGCCT	1 cut(s)	1363
Eco24I	GRGCYC	1 cut(s)	1644
Eco31I	GGTCTC	1 cut(s)	2229
Eco47I	GGWCC	5 cut(s)	110, 789, 1071, 1741, 2041
Eco53kI	GAGCTC	1 cut(s)	1642
Eco57I	CTGAAG	4 cut(s)	174, 1572, 2001, 2096
EcoICRI	GAGCTC	1 cut(s)	1642
EcoNI	CCTNNNNNAGG	1 cut(s)	1840
EcoO109I	RGGNCCY	2 cut(s)	394, 2041
EcoRI	GAATTC	1 cut(s)	364
EcoRII	CCWGG	4 cut(s)	467, 494, 1273, 1841
EcoT14I	CCWWGG	3 cut(s)	844, 1216, 2255
EcoT38I	GRGCYC	1 cut(s)	1644
ErhI	CCWWGG	3 cut(s)	844, 1216, 2255
FaqI	GGGAC	1 cut(s)	1147
FbaI	TGATCA	1 cut(s)	825
FblI	GTMKAC	2 cut(s)	99, 1267
Fnu4HI	GCNGC	3 cut(s)	1034, 1694, 2160
FokI	GGATG	9 cut(s)	388, 436, 478, 533, 640, 1128, 1136, 1353, 2264
FriOI	GRGCYC	1 cut(s)	1644
Fsp4HI	GCNGC	3 cut(s)	1034, 1694, 2160
FspBI	CTAG	5 cut(s)	264, 1698, 1808, 1854, 2115
GlaI	GCGC	3 cut(s)	1314, 1706, 1806
GluI	GCNGC	3 cut(s)	1034, 1694, 2160
GsaI	CCCAGC	2 cut(s)	1423, 1949
GsuI	CTGGAG	2 cut(s)	1296, 1455
HaeII	RGCGCY	1 cut(s)	1316
HaeIII	GGCC	3 cut(s)	396, 965, 1363
HapII	CCGG	2 cut(s)	1310, 2045
HhaI	GCGC	3 cut(s)	1315, 1707, 1807
Hin6I	GCGC	3 cut(s)	1313, 1705, 1805
HinP1I	GCGC	3 cut(s)	1313, 1705, 1805
HincII	GTYRAC	2 cut(s)	821, 1660
HindII	GTYRAC	2 cut(s)	821, 1660
HindIII	AAGCTT	2 cut(s)	1713, 1778
HinfI	GANTC	9 cut(s)	22, 880, 907, 1435, 1523, 1661, 1757, 1890, 2048
HpaII	CCGG	2 cut(s)	1310, 2045
HphI	GGTGA	7 cut(s)	24, 326, 820, 1163, 1804, 1999, 2132
Hpy166II	GTNNAC	8 cut(s)	70, 100, 821, 840, 1093, 1268, 1303, 1660
Hpy188I	TCNGA	8 cut(s)	81, 520, 583, 1071, 1110, 1458, 1591, 2131
Hpy8I	GTNNAC	8 cut(s)	70, 100, 821, 840, 1093, 1268, 1303, 1660
HpyAV	CCTTC	3 cut(s)	384, 896, 2074
HpyCH4III	ACNGT	3 cut(s)	1231, 1483, 2060
HpyCH4IV	ACGT	1 cut(s)	1305
HpyF10VI	GCNNNNNNNGC	7 cut(s)	611, 678, 935, 1639, 1702, 1951, 2165
HpyF3I	CTNAG	6 cut(s)	27, 46, 293, 1381, 1994, 2246
HpySE526I	ACGT	1 cut(s)	1305
HspAI	GCGC	3 cut(s)	1313, 1705, 1805
KpnI	GGTACC	1 cut(s)	2182
KroI	GCCGGC	1 cut(s)	1309
KroNI	GCCGGC	1 cut(s)	1311
Ksp22I	TGATCA	1 cut(s)	825
KspI	CCGCGG	1 cut(s)	233
LmnI	GCTCC	1 cut(s)	1647
Lsp1109I	GCAGC	1 cut(s)	1020
LweI	GCATC	5 cut(s)	1020, 1058, 1569, 1900, 2177
MaeI	CTAG	5 cut(s)	264, 1698, 1808, 1854, 2115
MaeII	ACGT	1 cut(s)	1305
MaeIII	GTNAC	8 cut(s)	30, 437, 995, 1501, 1582, 2070, 2185, 2201
MflI	RGATCY	1 cut(s)	1103
MhlI	GDGCHC	1 cut(s)	1644
MluCI	AATT	9 cut(s)	166, 177, 364, 525, 549, 588, 991, 1222, 1487
MlyI	GAGTC	4 cut(s)	1532, 1655, 1766, 2057
MmeI	TCCRAC	3 cut(s)	493, 731, 879
MroNI	GCCGGC	1 cut(s)	1309
MroXI	GAANNNNTTC	3 cut(s)	534, 906, 1434
MseI	TTAA	6 cut(s)	140, 977, 1629, 1830, 1974, 2055
MslI	CAYNNNNRTG	4 cut(s)	1371, 1650, 2150, 2173
MspA1I	CMGCKG	2 cut(s)	232, 922
MspCI	CTTAAG	1 cut(s)	139
MspI	CCGG	2 cut(s)	1310, 2045
MspR9I	CCNGG	5 cut(s)	469, 496, 1275, 1843, 2045
Mva1269I	GAATGC	2 cut(s)	17, 1382
MvaI	CCWGG	4 cut(s)	469, 496, 1275, 1843
MvnI	CGCG	3 cut(s)	232, 1520, 1707
MwoI	GCNNNNNNNGC	7 cut(s)	611, 678, 935, 1639, 1702, 1951, 2165
NaeI	GCCGGC	1 cut(s)	1311
NciI	CCSGG	1 cut(s)	2045
NcoI	CCATGG	1 cut(s)	2255
NgoMIV	GCCGGC	1 cut(s)	1309
NlaIV	GGNNCC	5 cut(s)	395, 466, 565, 2043, 2180
NmeAIII	GCCGAG	2 cut(s)	1423, 1663
NmuCI	GTSAC	4 cut(s)	30, 437, 1582, 2070
NspI	RCATGY	4 cut(s)	240, 745, 1327, 2275
NspV	TTCGAA	1 cut(s)	175
PagI	TCATGA	1 cut(s)	1426
PceI	AGGCCT	1 cut(s)	1363
PciI	ACATGT	1 cut(s)	236
PctI	GAATGC	2 cut(s)	17, 1382
PdiI	GCCGGC	1 cut(s)	1311
PdmI	GAANNNNTTC	3 cut(s)	534, 906, 1434
PfeI	GAWTC	5 cut(s)	22, 880, 907, 1435, 1890
PflMI	CCANNNNNTGG	2 cut(s)	1327, 2117
PkrI	GCNGC	3 cut(s)	1035, 1695, 2161
PleI	GAGTC	4 cut(s)	1531, 1655, 1765, 2056
PpsI	GAGTC	4 cut(s)	1531, 1655, 1765, 2056
PpuMI	RGGWCCY	1 cut(s)	2041
PscI	ACATGT	1 cut(s)	236
Psp124BI	GAGCTC	1 cut(s)	1644
Psp5II	RGGWCCY	1 cut(s)	2041
Psp6I	CCWGG	4 cut(s)	467, 494, 1273, 1841
PspFI	CCCAGC	2 cut(s)	1419, 1945
PspGI	CCWGG	4 cut(s)	467, 494, 1273, 1841
PspN4I	GGNNCC	5 cut(s)	395, 466, 565, 2043, 2180
PspPI	GGNCC	6 cut(s)	110, 394, 789, 1071, 1741, 2041
PspPPI	RGGWCCY	1 cut(s)	2041
PsrI	GAACNNNNNNTAC	2 cut(s)	60, 92
PstI	CTGCAG	1 cut(s)	1038
PstNI	CAGNNNCTG	1 cut(s)	1595
PsuI	RGATCY	1 cut(s)	1103
RsaI	GTAC	4 cut(s)	5, 69, 797, 2180
RsaNI	GTAC	4 cut(s)	4, 68, 796, 2179
RseI	CAYNNNNRTG	4 cut(s)	1371, 1650, 2150, 2173
Rsr2I	CGGWCCG	1 cut(s)	1741
RsrII	CGGWCCG	1 cut(s)	1741
SacI	GAGCTC	1 cut(s)	1644
SacII	CCGCGG	1 cut(s)	233
SaqAI	TTAA	6 cut(s)	140, 977, 1629, 1830, 1974, 2055
SatI	GCNGC	3 cut(s)	1034, 1694, 2160
Sau96I	GGNCC	6 cut(s)	110, 394, 789, 1071, 1741, 2041
SchI	GAGTC	4 cut(s)	1532, 1655, 1766, 2057
ScrFI	CCNGG	5 cut(s)	469, 496, 1275, 1843, 2045
SduI	GDGCHC	1 cut(s)	1644
SfaNI	GCATC	5 cut(s)	1020, 1058, 1569, 1900, 2177
SfcI	CTRYAG	2 cut(s)	216, 1034
Sfr303I	CCGCGG	1 cut(s)	233
SfuI	TTCGAA	1 cut(s)	175
SgrBI	CCGCGG	1 cut(s)	233
SinI	GGWCC	5 cut(s)	110, 789, 1071, 1741, 2041
SmiMI	CAYNNNNRTG	4 cut(s)	1371, 1650, 2150, 2173
SmlI	CTYRAG	1 cut(s)	139
SmoI	CTYRAG	1 cut(s)	139
SpeI	ACTAGT	1 cut(s)	2114
Sse9I	AATT	9 cut(s)	166, 177, 364, 525, 549, 588, 991, 1222, 1487
SseBI	AGGCCT	1 cut(s)	1363
SspI	AATATT	1 cut(s)	572
SspMI	CTAG	5 cut(s)	264, 1698, 1808, 1854, 2115
SstI	GAGCTC	1 cut(s)	1644
StuI	AGGCCT	1 cut(s)	1363
StyD4I	CCNGG	5 cut(s)	467, 494, 1273, 1841, 2043
StyI	CCWWGG	3 cut(s)	844, 1216, 2255
TaaI	ACNGT	3 cut(s)	1231, 1483, 2060
TaiI	ACGT	1 cut(s)	1308
TaqI	TCGA	5 cut(s)	175, 1905, 2051, 2103, 2268
TaqII	GACCGA	1 cut(s)	1758
TasI	AATT	9 cut(s)	166, 177, 364, 525, 549, 588, 991, 1222, 1487
TatI	WGTACW	2 cut(s)	3, 67
TauI	GCSGC	2 cut(s)	1696, 2162
TfiI	GAWTC	5 cut(s)	22, 880, 907, 1435, 1890
Tru1I	TTAA	6 cut(s)	140, 977, 1629, 1830, 1974, 2055
Tru9I	TTAA	6 cut(s)	140, 977, 1629, 1830, 1974, 2055
TscAI	CASTG	4 cut(s)	945, 1192, 1393, 2079
TseFI	GTSAC	4 cut(s)	30, 437, 1582, 2070
TseI	GCWGC	1 cut(s)	1033
Tsp45I	GTSAC	4 cut(s)	30, 437, 1582, 2070
TspDTI	ATGAA	7 cut(s)	288, 537, 1140, 1389, 1443, 1475, 1717
TspGWI	ACGGA	2 cut(s)	1096, 1754
TspRI	CASTG	4 cut(s)	945, 1192, 1393, 2079
Van91I	CCANNNNNTGG	2 cut(s)	1327, 2117
Vha464I	CTTAAG	1 cut(s)	139
VpaK11BI	GGWCC	5 cut(s)	110, 789, 1071, 1741, 2041
XagI	CCTNNNNNAGG	1 cut(s)	1840
XapI	RAATTY	2 cut(s)	177, 364
XceI	RCATGY	4 cut(s)	240, 745, 1327, 2275
XmiI	GTMKAC	2 cut(s)	99, 1267
XmnI	GAANNNNTTC	3 cut(s)	534, 906, 1434
XspI	CTAG	5 cut(s)	264, 1698, 1808, 1854, 2115

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.