Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr2

Orthogroup ID

OG0001845

Physical Location & Seq

Genomic Coordinates Forward (+)

3330156 .. 3332921

Gene Structure 2766 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000005988

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1158 bp

ATGGTCAAGAAAGTTTACTTGTATGGATTTCCCACTGTGGAGTCTCCAGAAGCGGTGACAAAATTTCTGGAGGAGTATACCGGAGAAGGAACTGTTCTCTCTGTGAATGTTCTTCCTCCAAAAGATGGCGCATCAAGATCATCTGCCACAGTTCAATTCACAACTGCAGAATGTGCTGAAATACTACTTCCATTAGCCGAAAAAAAAGGCCTGTGGTACGGAGAGTCTTATCTGAAAGCTCGAGAATGGAAGCGTGACATGGCACCGAGATCAGAAGTCTTGGAGGAACTTGTGACACTTCACTTTGGATGCAAGATATCTGAGGAGAAGTTTTCTGTGCTTTGGACAAAATCAGATGCTTCTGTGACATTTGGGATGGAACGGAAAAATGTGCATTTGTCTTTCTCCTATGATTGTGTTAAATACAAGCTTGAGCTCCCATCTGACACTATTTGCCGGATTGAGCTGCATTGCCCACGTGATCAGTATACAAAGTTTCTTCTCATCCAGTTACGTGGTGCCCCTCGGATTTATAAGAAAGATGTAACTTTGGCTGCTGACAACCACTGGGTTCGAGAAGTTGATTTCACTCCATCATGTTGCATCGAGCAATCCTCTACTTTATGTTTGGAGCTTCCATTAAGGTGTGCACTTCCAGATCTAGGCAAGAGTTTCCTTCACTATATAGAGAATGAAGGACAGTTTGTGCTGAAGAGAGGTACCAATTTCTCCGGAAATTCAGCTCTTGTTCCTACTCTGGCTCTACCCATAGGGATTGACTTGCCGTATAAAATCCTGTTCAAGATAAATTCATTGGTTCAGCATGGTTGTATTCCCGGGCAAGCTCTTGATGTCGATTTTTATAATCTAGTGGATCCTAAAAGAATAAGAATTGAATATATAGAGTGTGCCTTGGACAAACTGTTCAACTCCAGGGAGTGCTGCTATGAACCTGTAAGGTGGCTTCTTAAGCAGTACATCATGTACAAGGCATGCAAGCGGATTCCTCATTCACCAGCTATATCTTTAGATGAGGACTTGGGGAAGATGCATTCTATCTTTGAGAATCTGTTTCCCTCATCCACCCGAGGCATTCTTCTGCAGTTTCTAAGGGATGAGCAAGCTGCCGTGCAATCAGCTTTTCTTGCTGCCACGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0006139 GO:0006396 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009605 GO:0009607 GO:0009615 GO:0009719 GO:0009725 GO:0009751 GO:0009892 GO:0009987 GO:0010025 GO:0010033 GO:0010166 GO:0010467 GO:0010468 GO:0010605 GO:0010608 GO:0010629 GO:0014070 GO:0016070 GO:0016246 GO:0016441 GO:0016458 GO:0019222 GO:0030422 GO:0031047 GO:0031050 GO:0034641 GO:0035194 GO:0040029 GO:0042221 GO:0042493 GO:0043170 GO:0043207 GO:0043331 GO:0044237 GO:0044238 GO:0046483 GO:0046677 GO:0048518 GO:0048519 GO:0048522 GO:0050789 GO:0050794 GO:0050896 GO:0051704 GO:0051707 GO:0051716 GO:0060147 GO:0060148 GO:0060255 GO:0060968 GO:0065007 GO:0070887 GO:0070918 GO:0071310 GO:0071359 GO:0071407 GO:0071704 GO:0090304 GO:1901360 GO:1901568 GO:1901570 GO:1901576 GO:1901698 GO:1901699 GO:1901700

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

RdRP

Protein Analysis

386

Amino Acids

43.8

Weight (kDa)

6.48

Isoelectric Point (pI)

49.96

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RRM_RdRP1_2	PF26250	7 - 84	2.3e-13	RdRP1/2, RRM domain
PH_RDR2	PF24823	100 - 235	5.5e-30	RDR2 PH-like domain
RdRP_helical	PF26252	254 - 326	4.7e-12	RNA dependent RNA polymerase, helical domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001845)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_4g13760 FvH4_4g33441 FvH4_4g33445
malus_domestica	MD13G1019400.v1.1 MD13G1041200.v1.1 MD16G1017600.v1.1
prunus_persica	Prupe.1G132100_v2.0.a1 Prupe.1G132200_v2.0.a1 Prupe.1G132200_v2.0.a1 Prupe.1G332600_v2.0.a1 Prupe.1G332600_v2.0.a1 Prupe.1G332600_v2.0.a1 Prupe.1G334500_v2.0.a1 Prupe.1G334500_v2.0.a1 Prupe.1G334500_v2.0.a1
pyrus_communis	pycom13g01650 pycom13g03550
rosa_chinensis	RchiOBHm_Chr2g0166231 RchiOBHm_Chr4g0442711 RchiOBHm_Chr4g0442751
rosa_laevigata	RLG00000005987 RLG00000005988 RLG00000005989 RLG00000021600
rosa_multiflora	Rmu_co8517261.1_g000001 Rmu_sc0018648.1_g000004 Rmu_sc0035717.1_g000001 Rmu_ssc0000204.1_g000023
rosa_roxburghii	Rroxscaffold_2G00085060 Rroxscaffold_5G00383520 Rroxscaffold_5G00383530 Rroxscaffold_5G00383540
rosa_rugosa	Rorug02G0521500 Rorug02G0521600
rosa_samantha	Rh2AG587500 Rh2BG599400 Rh2CG569900 Rh2DG609500 Rh4AG395000 Rh4AG395300 Rh4BG408000 Rh4CG423700 Rh4DG402000 Rh4DG402200
rosa_wichuraiana	Rw2G048970 Rw4G034140 Rw4G034160

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	534, 864
Acc65I	GGTACC	1 cut(s)	719
AccB1I	GGYRCC	3 cut(s)	262, 518, 719
AccB7I	CCANNNNNTGG	1 cut(s)	125
AccI	GTMKAC	2 cut(s)	77, 488
AccIII	TCCGGA	1 cut(s)	731
AciI	CCGC	2 cut(s)	53, 1000
AclWI	GGATC	2 cut(s)	869, 882
AcsI	RAATTY	3 cut(s)	62, 736, 808
AcuI	CTGAAG	1 cut(s)	731
AcvI	CACGTG	1 cut(s)	479
AfaI	GTAC	4 cut(s)	218, 721, 977, 986
AfiI	CCNNNNNNNGG	2 cut(s)	125, 662
AflII	CTTAAG	1 cut(s)	968
AgsI	TTSAA	4 cut(s)	155, 802, 896, 928
AjnI	CCWGG	1 cut(s)	932
AloI	GAACNNNNNNTCC	2 cut(s)	908, 940
Alw21I	GWGCWC	2 cut(s)	438, 652
Alw26I	GTCTC	1 cut(s)	48
Alw44I	GTGCAC	1 cut(s)	648
AlwI	GGATC	2 cut(s)	869, 882
Ama87I	CYCGRG	3 cut(s)	240, 836, 1086
Aor13HI	TCCGGA	1 cut(s)	731
AoxI	GGCC	1 cut(s)	208
ApaLI	GTGCAC	1 cut(s)	648
ApeKI	GCWGC	5 cut(s)	466, 554, 942, 1124, 1148
ApoI	RAATTY	3 cut(s)	62, 736, 808
Asp718I	GGTACC	1 cut(s)	719
AspLEI	GCGC	1 cut(s)	131
AsuC2I	CCSGG	2 cut(s)	837, 838
AsuHPI	GGTGA	2 cut(s)	67, 1005
AvaI	CYCGRG	3 cut(s)	240, 836, 1086
BaeGI	GKGCMC	2 cut(s)	523, 652
BamHI	GGATCC	1 cut(s)	874
BanI	GGYRCC	3 cut(s)	262, 518, 719
BanII	GRGCYC	1 cut(s)	438
BarI	GAAGNNNNNNTAC	2 cut(s)	948, 980
BbrPI	CACGTG	1 cut(s)	479
Bbv12I	GWGCWC	2 cut(s)	438, 652
BbvI	GCAGC	5 cut(s)	453, 541, 929, 1111, 1135
BccI	CCATC	4 cut(s)	119, 370, 448, 601
BceAI	ACGGC	2 cut(s)	769, 1112
BciT130I	CCWGG	1 cut(s)	934
BclI	TGATCA	1 cut(s)	481
BcnI	CCSGG	2 cut(s)	837, 838
BcoDI	GTCTC	1 cut(s)	48
BfaI	CTAG	2 cut(s)	662, 869
BfmI	CTRYAG	2 cut(s)	165, 1100
BfrI	CTTAAG	1 cut(s)	968
BglII	AGATCT	1 cut(s)	658
BisI	GCNGC	5 cut(s)	467, 555, 943, 1125, 1149
BlsI	GCNGC	5 cut(s)	468, 556, 944, 1126, 1150
Bme1390I	CCNGG	3 cut(s)	837, 838, 934
BmeT110I	CYCGRG	3 cut(s)	240, 836, 1086
BmiI	GGNNCC	4 cut(s)	264, 520, 721, 876
BmrFI	CCNGG	3 cut(s)	837, 838, 934
BmrI	ACTGGG	1 cut(s)	577
BmsI	GCATC	5 cut(s)	140, 299, 346, 612, 1038
BmuI	ACTGGG	1 cut(s)	577
BplI	GAGNNNNNCTC	2 cut(s)	599, 631
BpmI	CTGGAG	3 cut(s)	30, 89, 916
BpuEI	CTTGAG	1 cut(s)	452
BpuMI	CCSGG	2 cut(s)	837, 838
BsaAI	YACGTR	3 cut(s)	479, 515, 1155
BsaJI	CCNNGG	5 cut(s)	524, 836, 912, 933, 1087
BsaWI	WCCGGW	2 cut(s)	80, 731
Bsc4I	CCNNNNNNNGG	2 cut(s)	125, 662
Bse1I	ACTGG	2 cut(s)	508, 572
Bse3DI	GCAATG	1 cut(s)	469
BseAI	TCCGGA	1 cut(s)	731
BseBI	CCWGG	1 cut(s)	934
BseDI	CCNNGG	5 cut(s)	524, 836, 912, 933, 1087
BseGI	GGATG	5 cut(s)	314, 381, 504, 1079, 1120
BseLI	CCNNNNNNNGG	2 cut(s)	125, 662
BseMI	GCAATG	1 cut(s)	469
BseMII	CTCAG	1 cut(s)	312
BseNI	ACTGG	2 cut(s)	508, 572
BseRI	GAGGAG	2 cut(s)	86, 338
BseSI	GKGCMC	2 cut(s)	523, 652
BseXI	GCAGC	5 cut(s)	453, 541, 929, 1111, 1135
BshFI	GGCC	1 cut(s)	210
BshNI	GGYRCC	3 cut(s)	262, 518, 719
BsiHKAI	GWGCWC	2 cut(s)	438, 652
BsiHKCI	CYCGRG	3 cut(s)	240, 836, 1086
BsiSI	CCGG	4 cut(s)	81, 457, 732, 837
BslI	CCNNNNNNNGG	2 cut(s)	125, 662
BsmAI	GTCTC	1 cut(s)	48
BsmI	GAATGC	2 cut(s)	1051, 1092
BsnI	GGCC	1 cut(s)	210
BsoBI	CYCGRG	3 cut(s)	240, 836, 1086
Bsp1286I	GDGCHC	3 cut(s)	438, 523, 652
Bsp13I	TCCGGA	1 cut(s)	731
Bsp1407I	TGTACA	1 cut(s)	984
Bsp143I	GATC	5 cut(s)	137, 269, 481, 658, 874
BspACI	CCGC	2 cut(s)	53, 1000
BspANI	GGCC	1 cut(s)	210
BspCNI	CTCAG	1 cut(s)	313
BspEI	TCCGGA	1 cut(s)	731
BspLI	GGNNCC	4 cut(s)	264, 520, 721, 876
BspMAI	CTGCAG	2 cut(s)	169, 1104
BspPI	GGATC	2 cut(s)	869, 882
BspT107I	GGYRCC	3 cut(s)	262, 518, 719
BspTI	CTTAAG	1 cut(s)	968
BsrDI	GCAATG	1 cut(s)	469
BsrGI	TGTACA	1 cut(s)	984
BsrI	ACTGG	2 cut(s)	508, 572
BssECI	CCNNGG	5 cut(s)	524, 836, 912, 933, 1087
BssMI	GATC	5 cut(s)	137, 269, 481, 658, 874
BssNAI	GTATAC	2 cut(s)	78, 489
BssT1I	CCWWGG	1 cut(s)	912
Bst1107I	GTATAC	2 cut(s)	78, 489
Bst2UI	CCWGG	1 cut(s)	934
Bst4CI	ACNGT	5 cut(s)	37, 94, 151, 702, 924
Bst6I	CTCTTC	1 cut(s)	707
BstAFI	CTTAAG	1 cut(s)	968
BstAPI	GCANNNNNTGC	1 cut(s)	173
BstAUI	TGTACA	1 cut(s)	984
BstBAI	YACGTR	3 cut(s)	479, 515, 1155
BstC8I	GCNNGC	4 cut(s)	843, 994, 998, 1122
BstDEI	CTNAG	2 cut(s)	321, 1109
BstF5I	GGATG	5 cut(s)	314, 381, 504, 1079, 1120
BstHHI	GCGC	1 cut(s)	131
BstKTI	GATC	5 cut(s)	140, 272, 484, 661, 877
BstMAI	GTCTC	1 cut(s)	48
BstMBI	GATC	5 cut(s)	137, 269, 481, 658, 874
BstMWI	GCNNNNNNNGC	3 cut(s)	173, 970, 1145
BstNI	CCWGG	1 cut(s)	934
BstNSI	RCATGY	1 cut(s)	996
BstSCI	CCNGG	3 cut(s)	835, 836, 932
BstSFI	CTRYAG	2 cut(s)	165, 1100
BstSLI	GKGCMC	2 cut(s)	523, 652
BstV1I	GCAGC	5 cut(s)	453, 541, 929, 1111, 1135
BstX2I	RGATCY	2 cut(s)	658, 874
BstXI	CCANNNNNNTGG	1 cut(s)	515
BstYI	RGATCY	2 cut(s)	658, 874
BstZ17I	GTATAC	2 cut(s)	78, 489
BsuRI	GGCC	1 cut(s)	210
BtsCI	GGATG	5 cut(s)	314, 381, 504, 1079, 1120
BtsIMutI	CAGTG	2 cut(s)	33, 565
Cac8I	GCNNGC	4 cut(s)	843, 994, 998, 1122
CfoI	GCGC	1 cut(s)	131
Cfr9I	CCCGGG	1 cut(s)	836
Csp6I	GTAC	4 cut(s)	217, 720, 976, 985
CviAII	CATG	5 cut(s)	259, 597, 824, 982, 993
CviQI	GTAC	4 cut(s)	217, 720, 976, 985
DdeI	CTNAG	2 cut(s)	321, 1109
DpnI	GATC	5 cut(s)	139, 271, 483, 660, 876
DpnII	GATC	5 cut(s)	137, 269, 481, 658, 874
Eam1104I	CTCTTC	1 cut(s)	707
EarI	CTCTTC	1 cut(s)	707
Ecl136II	GAGCTC	1 cut(s)	436
Eco130I	CCWWGG	1 cut(s)	912
Eco147I	AGGCCT	1 cut(s)	210
Eco24I	GRGCYC	1 cut(s)	438
Eco32I	GATATC	1 cut(s)	318
Eco53kI	GAGCTC	1 cut(s)	436
Eco57I	CTGAAG	1 cut(s)	731
Eco72I	CACGTG	1 cut(s)	479
Eco88I	CYCGRG	3 cut(s)	240, 836, 1086
EcoICRI	GAGCTC	1 cut(s)	436
EcoRII	CCWGG	1 cut(s)	932
EcoRV	GATATC	1 cut(s)	318
EcoT14I	CCWWGG	1 cut(s)	912
EcoT22I	ATGCAT	1 cut(s)	1053
EcoT38I	GRGCYC	1 cut(s)	438
ErhI	CCWWGG	1 cut(s)	912
FaeI	CATG	5 cut(s)	262, 600, 827, 985, 996
FatI	CATG	5 cut(s)	258, 596, 823, 981, 992
FbaI	TGATCA	1 cut(s)	481
FblI	GTMKAC	2 cut(s)	77, 488
Fnu4HI	GCNGC	5 cut(s)	467, 555, 943, 1125, 1149
FokI	GGATG	5 cut(s)	321, 388, 491, 1066, 1127
FriOI	GRGCYC	1 cut(s)	438
Fsp4HI	GCNGC	5 cut(s)	467, 555, 943, 1125, 1149
FspBI	CTAG	2 cut(s)	662, 869
GlaI	GCGC	1 cut(s)	130
GluI	GCNGC	5 cut(s)	467, 555, 943, 1125, 1149
GsuI	CTGGAG	3 cut(s)	30, 89, 916
HaeIII	GGCC	1 cut(s)	210
HapII	CCGG	4 cut(s)	81, 457, 732, 837
HhaI	GCGC	1 cut(s)	131
Hin1II	CATG	5 cut(s)	262, 600, 827, 985, 996
Hin6I	GCGC	1 cut(s)	129
HinP1I	GCGC	1 cut(s)	129
HindIII	AAGCTT	1 cut(s)	428
HinfI	GANTC	4 cut(s)	41, 224, 1003, 1066
HpaII	CCGG	4 cut(s)	81, 457, 732, 837
HphI	GGTGA	2 cut(s)	67, 1005
Hpy166II	GTNNAC	4 cut(s)	16, 78, 489, 650
Hpy188I	TCNGA	6 cut(s)	234, 274, 322, 355, 445, 528
Hpy8I	GTNNAC	4 cut(s)	16, 78, 489, 650
HpyAV	CCTTC	3 cut(s)	80, 686, 689
HpyCH4III	ACNGT	5 cut(s)	37, 94, 151, 702, 924
HpyCH4IV	ACGT	3 cut(s)	478, 514, 1154
HpyF10VI	GCNNNNNNNGC	3 cut(s)	173, 970, 1145
HpyF3I	CTNAG	2 cut(s)	321, 1109
HpySE526I	ACGT	3 cut(s)	478, 514, 1154
Hsp92II	CATG	5 cut(s)	262, 600, 827, 985, 996
HspAI	GCGC	1 cut(s)	129
Kpn2I	TCCGGA	1 cut(s)	731
KpnI	GGTACC	1 cut(s)	723
Ksp22I	TGATCA	1 cut(s)	481
Kzo9I	GATC	5 cut(s)	137, 269, 481, 658, 874
LmnI	GCTCC	2 cut(s)	441, 631
Lsp1109I	GCAGC	5 cut(s)	453, 541, 929, 1111, 1135
LweI	GCATC	5 cut(s)	140, 299, 346, 612, 1038
MaeI	CTAG	2 cut(s)	662, 869
MaeII	ACGT	3 cut(s)	478, 514, 1154
MaeIII	GTNAC	6 cut(s)	55, 254, 292, 364, 510, 544
MalI	GATC	5 cut(s)	139, 271, 483, 660, 876
MboI	GATC	5 cut(s)	137, 269, 481, 658, 874
MboII	GAAGA	5 cut(s)	104, 491, 724, 1057, 1088
MflI	RGATCY	2 cut(s)	658, 874
MhlI	GDGCHC	3 cut(s)	438, 523, 652
MluCI	AATT	6 cut(s)	62, 155, 724, 736, 808, 891
MlyI	GAGTC	2 cut(s)	50, 233
Mph1103I	ATGCAT	1 cut(s)	1053
MroI	TCCGGA	1 cut(s)	731
MseI	TTAA	3 cut(s)	420, 641, 969
MslI	CAYNNNNRTG	1 cut(s)	643
MspCI	CTTAAG	1 cut(s)	968
MspI	CCGG	4 cut(s)	81, 457, 732, 837
MspR9I	CCNGG	3 cut(s)	837, 838, 934
Mva1269I	GAATGC	2 cut(s)	1051, 1092
MvaI	CCWGG	1 cut(s)	934
MwoI	GCNNNNNNNGC	3 cut(s)	173, 970, 1145
NciI	CCSGG	2 cut(s)	837, 838
NdeII	GATC	5 cut(s)	137, 269, 481, 658, 874
NlaIII	CATG	5 cut(s)	262, 600, 827, 985, 996
NlaIV	GGNNCC	4 cut(s)	264, 520, 721, 876
NmuCI	GTSAC	4 cut(s)	55, 254, 292, 364
NsiI	ATGCAT	1 cut(s)	1053
NspI	RCATGY	1 cut(s)	996
PaeI	GCATGC	1 cut(s)	996
PaeR7I	CTCGAG	1 cut(s)	240
PceI	AGGCCT	1 cut(s)	210
PctI	GAATGC	2 cut(s)	1051, 1092
PfeI	GAWTC	2 cut(s)	1003, 1066
PflMI	CCANNNNNTGG	1 cut(s)	125
PkrI	GCNGC	5 cut(s)	468, 556, 944, 1126, 1150
PleI	GAGTC	2 cut(s)	49, 232
PmaCI	CACGTG	1 cut(s)	479
PmlI	CACGTG	1 cut(s)	479
PpsI	GAGTC	2 cut(s)	49, 232
Ppu21I	YACGTR	3 cut(s)	479, 515, 1155
PsiI	TTATAA	2 cut(s)	534, 864
Psp124BI	GAGCTC	1 cut(s)	438
Psp6I	CCWGG	1 cut(s)	932
PspCI	CACGTG	1 cut(s)	479
PspGI	CCWGG	1 cut(s)	932
PspN4I	GGNNCC	4 cut(s)	264, 520, 721, 876
PstI	CTGCAG	2 cut(s)	169, 1104
PsuI	RGATCY	2 cut(s)	658, 874
RsaI	GTAC	4 cut(s)	218, 721, 977, 986
RsaNI	GTAC	4 cut(s)	217, 720, 976, 985
RseI	CAYNNNNRTG	1 cut(s)	643
SacI	GAGCTC	1 cut(s)	438
SaqAI	TTAA	3 cut(s)	420, 641, 969
SatI	GCNGC	5 cut(s)	467, 555, 943, 1125, 1149
Sau3AI	GATC	5 cut(s)	137, 269, 481, 658, 874
SchI	GAGTC	2 cut(s)	50, 233
ScrFI	CCNGG	3 cut(s)	837, 838, 934
SduI	GDGCHC	3 cut(s)	438, 523, 652
SfaNI	GCATC	5 cut(s)	140, 299, 346, 612, 1038
SfcI	CTRYAG	2 cut(s)	165, 1100
Sfr274I	CTCGAG	1 cut(s)	240
SlaI	CTCGAG	1 cut(s)	240
SmaI	CCCGGG	1 cut(s)	838
SmiMI	CAYNNNNRTG	1 cut(s)	643
SmlI	CTYRAG	3 cut(s)	240, 431, 968
SmoI	CTYRAG	3 cut(s)	240, 431, 968
SphI	GCATGC	1 cut(s)	996
Sse9I	AATT	6 cut(s)	62, 155, 724, 736, 808, 891
SseBI	AGGCCT	1 cut(s)	210
SsiI	CCGC	2 cut(s)	53, 1000
SspMI	CTAG	2 cut(s)	662, 869
SstI	GAGCTC	1 cut(s)	438
StuI	AGGCCT	1 cut(s)	210
StyD4I	CCNGG	3 cut(s)	835, 836, 932
StyI	CCWWGG	1 cut(s)	912
TaaI	ACNGT	5 cut(s)	37, 94, 151, 702, 924
TaiI	ACGT	3 cut(s)	481, 517, 1157
TaqI	TCGA	4 cut(s)	241, 574, 606, 855
TasI	AATT	6 cut(s)	62, 155, 724, 736, 808, 891
TatI	WGTACW	2 cut(s)	975, 984
TfiI	GAWTC	2 cut(s)	1003, 1066
Tru1I	TTAA	3 cut(s)	420, 641, 969
Tru9I	TTAA	3 cut(s)	420, 641, 969
TscAI	CASTG	2 cut(s)	40, 572
TseFI	GTSAC	4 cut(s)	55, 254, 292, 364
TseI	GCWGC	5 cut(s)	466, 554, 942, 1124, 1148
Tsp45I	GTSAC	4 cut(s)	55, 254, 292, 364
TspDTI	ATGAA	3 cut(s)	708, 801, 963
TspGWI	ACGGA	2 cut(s)	234, 397
TspMI	CCCGGG	1 cut(s)	836
TspRI	CASTG	2 cut(s)	40, 572
Van91I	CCANNNNNTGG	1 cut(s)	125
Vha464I	CTTAAG	1 cut(s)	968
VneI	GTGCAC	1 cut(s)	648
XapI	RAATTY	3 cut(s)	62, 736, 808
XceI	RCATGY	1 cut(s)	996
XhoI	CTCGAG	1 cut(s)	240
XmaI	CCCGGG	1 cut(s)	836
XmiI	GTMKAC	2 cut(s)	77, 488
XspI	CTAG	2 cut(s)	662, 869
Zsp2I	ATGCAT	1 cut(s)	1053

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.