Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr13

Orthogroup ID

OG0001845

Physical Location & Seq

Genomic Coordinates Forward (+)

2354366 .. 2362872

Gene Structure 8507 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom13g03550.4

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2709 bp

ATGTTCAAGTCAAGTTTGGGACAGAATTTAAGAATATCTACTCCTCGTTCTCTTATGATTCTGCTGTATACAAGCTTGAGGTCTTCACGGAAAGTATTAGCCAGATGGAGCTCCATATTGCGCGCGATCGAGCTTAGGAAGTATCTTCTAATCCAGCAAACATCTGACAATGACTGGGTTCGAGAAGTTGACTTCACTTCATCGTGCTGCAGCATTGGCCAATCTTCGGCTGTATGTTTGGAACTTCCATATGGTTCTGTGCTTCCAAATCTACGTGATAATTTTCTTCATTACCAAGAAACTGAAGGACACTTCGCTTTGGAGATAGGCAACCCTTTCTCCTGTAATTCAGATCTTGATCCCATTGTCGGTCCACCCGAAGGCATTAACTTGCCGTATAAAATCCTGTTCAAGATCAATTCCTTGGTTCAGCACGGACGTGTTCCAGGGCAAGCACTTGATGTCACTTTTTATAAGCTAGTTGATCCTAGCACAATAAGAATTGACTACATAGAGTGTGCCCTGGACAAATTATTTCGCTTGAAAGCGTGCTGCTATGATCCTGTGAGTTGGCTTTGTGAGCAGTACAGAGATTACAAGTCGTGCACGCGAATTCCTGAAACACCTGCTATCTCTTTAGATGCTGGAATGGTGTATGTGCACAGGGTTCAAGTCACACCATCTAAAGTTTATTTTTGTGGTCCGGAGGTAAATCTTTCCAACCGTGTTCTACGAAAATATCCTCAAGATATTGATAATTTTCTTCGTGTTTCTTTCGTGGATGAGGACTTGGGTAAGATACATTCGAAAGATTTATGTTCGCGTCCGCGCACAAGTAACACTTCTGCAGAAGAGGAAAGGAGGACGAGAGTTTATGAAAGGATATTTTCTACTCTAAGAAATGGCATTGTCATTGGTGACAAGAAATTTGAGTTTCTTGCCTTTTCATCAAGTCAGTTACGCGAGCATTCAGTGTGGATGTTTGCGTCAAGAAGTGAGCTCAGCGCACAAGACATTAGAAATTGGATGGGGGACTTTAGAGACATCAGAAATGTGGCGAAGTATGGTGCTAGGTTGGGCCAGGCTTTCAGCTCTTCCAGGGAGACTTTTAATGTTGATAGGGATGAAATCGAACTCATTCCTGATGTTAAAATCGAAAGGTGTGGAGTCAAATATTGTTTCTCTGATGGAATTGGGAAGATATCTGCTGAATTTGCTGAAAGGGTGGCAAGAAAGTGCGGGAGAAGTTCTACTCCATCAGCTTTTCAAATTCGTAGAGGTGGCTATAAAGGTGTCGTGGCAGTAGATCCGACATTGGCAAAGAACTTGGCACTGAGGGAGAGCATGTGCAAGTACCAATCCAACAACACAGCACTTGATGTTCTCAAATGGAGCACGTACCAGCCTTGTTTCCTCAATCGTCAACTGATCACCCTTCTGTCCACCCTTAGAGTCCCGGATAAGATCGATCATGTCTTTCAGAGGAAGCAAACGCAGGCTTTGAATCAACTGGAAGGCGTTTTAACTGACCCATCAAGAGCAAAAGAAGCACTCGAAACGATATTTCAAGGGGAGGTCACAGACGTTTTGAAGGAAATGCTTTCGTGTGGTTACAAGCCGGATGCAGAACCATTTCTGTCATTGACGCTACAAGCATTCTGCGCATCCAAGCTCATGGAACTGCGGACAAAAACAAGGATATTTGTTTCGAGTGGAAGATCAATGATGGGATGTCTGGATGAAACTGGAACGTTGGAATATGGTCAGGTATTTGTGCAATGCTCTCACCGCGTGATTTCCACTGGCAGTGCTCACAGCAACACTACTTCGAGTGAAGAGAAGTTTGTTGTGGACAGGAATGTTGTAGTTGCTAGAAACCCATGTTTACACCCGGGAGATGTTCGTGTTCTCACAGCTGTGGACGTGCCGGCATTGCACCACATGGTGGATTGTGTAGAAGTTGCAGAGTCGTTTACAAACTACATAGTGAACGACATGTTGGGGATCATTTCAAATGCACATGCTGTCTTTGCAGACACAGAACCGCAGAAGGCCATGAGTGCTCAATGTATAGAGCTCGCCAAGCTCTGTTCCTATGCTGTCGACTCTCCAAAAACTGGCGTGGTAGTGGAAGTGCCGCGTAATCTGCGTGCCCAAGAATATCCGGATTTCATGGAAAAGGTTGAGAAACCTACGTATGAGTCCGGCCGTGTGATTGGGAAGCTTTTCCGACAGGATCCTGACATGGAGGTAGACGGATTCGAAGCTTACATCGATGATGCCATCAACTGCAAAAGGGAGTATGACTACAAGCTGGGAAACTTGATGGATTACTACGGCATCAAAACTGAAGCAGATATACTAGCTGGGAACATCACCAGTGTGTCGAAATTTTTCAATAAGAGAAGGGACTTGGAGACAATTAATTACGCTGTAAGGTCACTTAAAAAGGAAGCTAGGACCTGGTTTCATGCGAATCAGTCAGATTCCAGCACCGATGTCGATGATGTATCCGCAACAAAAGCGTCAGCTTGGTACTACGTTACATATCATCCTCGTTACTGGGGTCGCTGCAACAAGGGAATGGAAAGGGATCATCTTCCTCAGCTTTCCGTGGTGTGTTTTCGACAAGCTCATCCAGATCAAGAGGGAGAAAACAAATCTGAGGAATTCTTTTCATATGTCCGATCAAAGCGGCGTCATGCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0006139 GO:0006396 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009605 GO:0009607 GO:0009615 GO:0009719 GO:0009725 GO:0009751 GO:0009892 GO:0009987 GO:0010025 GO:0010033 GO:0010166 GO:0010467 GO:0010468 GO:0010605 GO:0010608 GO:0010629 GO:0014070 GO:0016070 GO:0016246 GO:0016441 GO:0016458 GO:0019222 GO:0030422 GO:0031047 GO:0031050 GO:0034641 GO:0035194 GO:0040029 GO:0042221 GO:0042493 GO:0043170 GO:0043207 GO:0043331 GO:0044237 GO:0044238 GO:0046483 GO:0046677 GO:0048518 GO:0048519 GO:0048522 GO:0050789 GO:0050794 GO:0050896 GO:0051704 GO:0051707 GO:0051716 GO:0060147 GO:0060148 GO:0060255 GO:0060968 GO:0065007 GO:0070887 GO:0070918 GO:0071310 GO:0071359 GO:0071407 GO:0071704 GO:0090304 GO:1901360 GO:1901568 GO:1901570 GO:1901576 GO:1901698 GO:1901699 GO:1901700

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

RdRP

Protein Analysis

903

Amino Acids

102.55

Weight (kDa)

7.67

Isoelectric Point (pI)

39.48

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001845)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_4g13760 FvH4_4g33441 FvH4_4g33445
malus_domestica	MD13G1019400.v1.1 MD13G1041200.v1.1 MD16G1017600.v1.1
prunus_persica	Prupe.1G132100_v2.0.a1 Prupe.1G132200_v2.0.a1 Prupe.1G132200_v2.0.a1 Prupe.1G332600_v2.0.a1 Prupe.1G332600_v2.0.a1 Prupe.1G332600_v2.0.a1 Prupe.1G334500_v2.0.a1 Prupe.1G334500_v2.0.a1 Prupe.1G334500_v2.0.a1
pyrus_communis	pycom13g01650 pycom13g03550
rosa_chinensis	RchiOBHm_Chr2g0166231 RchiOBHm_Chr4g0442711 RchiOBHm_Chr4g0442751
rosa_laevigata	RLG00000005987 RLG00000005988 RLG00000005989 RLG00000021600
rosa_multiflora	Rmu_co8517261.1_g000001 Rmu_sc0018648.1_g000004 Rmu_sc0035717.1_g000001 Rmu_ssc0000204.1_g000023
rosa_roxburghii	Rroxscaffold_2G00085060 Rroxscaffold_5G00383520 Rroxscaffold_5G00383530 Rroxscaffold_5G00383540
rosa_rugosa	Rorug02G0521500 Rorug02G0521600
rosa_samantha	Rh2AG587500 Rh2BG599400 Rh2CG569900 Rh2DG609500 Rh4AG395000 Rh4AG395300 Rh4BG408000 Rh4CG423700 Rh4DG402000 Rh4DG402200
rosa_wichuraiana	Rw2G048970 Rw4G034140 Rw4G034160

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	474
AarI	CACCTGC	1 cut(s)	634
Acc16I	TGCGCA	1 cut(s)	1663
Acc36I	ACCTGC	1 cut(s)	634
AccB7I	CCANNNNNTGG	2 cut(s)	1945, 2117
AccI	GTMKAC	3 cut(s)	68, 2103, 2253
AccII	CGCG	8 cut(s)	123, 125, 610, 823, 829, 963, 1791, 2140
AccIII	TCCGGA	2 cut(s)	703, 2164
AciI	CCGC	8 cut(s)	827, 1239, 1684, 1789, 2045, 2138, 2514, 2695
AclI	AACGTT	1 cut(s)	1751
AclWI	GGATC	8 cut(s)	353, 479, 554, 1301, 2012, 2231, 2244, 2601
AcoI	YGGCCR	2 cut(s)	217, 2206
AcsI	RAATTY	7 cut(s)	25, 612, 926, 1211, 1269, 2390, 2669
AcuI	CTGAAG	2 cut(s)	324, 2370
AcyI	GRCGYC	1 cut(s)	2698
AdeI	CACNNNGTG	2 cut(s)	1792, 1945
AfaI	GTAC	4 cut(s)	587, 1355, 1400, 2537
AfiI	CCNNNNNNNGG	5 cut(s)	226, 368, 380, 1945, 2117
AflIII	ACRYGT	2 cut(s)	439, 1995
AjiI	CACGTC	2 cut(s)	440, 1924
AjnI	CCWGG	5 cut(s)	445, 522, 1080, 1097, 2462
AjuI	GAANNNNNNNTTGG	2 cut(s)	1982, 2014
AleI	CACNNNNGTG	3 cut(s)	438, 1916, 2381
Alw21I	GWGCWC	8 cut(s)	113, 608, 663, 1002, 1397, 1813, 2065, 2079
Alw26I	GTCTC	3 cut(s)	1035, 1097, 2411
Alw44I	GTGCAC	2 cut(s)	604, 659
AlwI	GGATC	8 cut(s)	353, 479, 554, 1301, 2012, 2231, 2244, 2601
Ama87I	CYCGRG	1 cut(s)	1891
Aor13HI	TCCGGA	2 cut(s)	703, 2164
AoxI	GGCC	4 cut(s)	217, 1078, 2052, 2206
ApaLI	GTGCAC	2 cut(s)	604, 659
ApeKI	GCWGC	4 cut(s)	207, 210, 552, 2571
ApoI	RAATTY	7 cut(s)	25, 612, 926, 1211, 1269, 2390, 2669
ArsI	GACNNNNNNTTYG	2 cut(s)	911, 943
AseI	ATTAAT	1 cut(s)	2424
Asp700I	GAANNNNTTC	4 cut(s)	1137, 1632, 2225, 2393
AspLEI	GCGC	5 cut(s)	123, 125, 831, 1007, 1664
AspS9I	GGNCC	4 cut(s)	371, 701, 1078, 2460
AsuC2I	CCSGG	3 cut(s)	1457, 1892, 1893
AsuHPI	GGTGA	4 cut(s)	929, 1423, 1778, 2368
AsuII	TTCGAA	2 cut(s)	806, 2262
AvaI	CYCGRG	1 cut(s)	1891
AvaII	GGWCC	3 cut(s)	371, 701, 2460
BaeGI	GKGCMC	4 cut(s)	523, 608, 663, 2155
BalI	TGGCCA	1 cut(s)	219
BamHI	GGATCC	1 cut(s)	2236
BanII	GRGCYC	3 cut(s)	113, 1002, 2079
BarI	GAAGNNNNNNTAC	2 cut(s)	2343, 2375
BbsI	GAAGAC	1 cut(s)	75
Bbv12I	GWGCWC	8 cut(s)	113, 608, 663, 1002, 1397, 1813, 2065, 2079
BbvCI	CCTCAGC	1 cut(s)	2604
BbvI	GCAGC	4 cut(s)	194, 222, 539, 2558
BccI	CCATC	9 cut(s)	99, 688, 1021, 1181, 1264, 1540, 1720, 2291, 2320
BceAI	ACGGC	3 cut(s)	379, 2193, 2353
BcgI	CGANNNNNNTGC	2 cut(s)	2482, 2516
BciT130I	CCWGG	5 cut(s)	447, 524, 1082, 1099, 2464
BciVI	GTATCC	1 cut(s)	2521
BclI	TGATCA	1 cut(s)	1428
BcnI	CCSGG	3 cut(s)	1457, 1892, 1893
BcoDI	GTCTC	3 cut(s)	1035, 1097, 2411
BfaI	CTAG	6 cut(s)	479, 489, 1071, 1872, 2363, 2457
BfmI	CTRYAG	2 cut(s)	208, 846
BfuAI	ACCTGC	1 cut(s)	634
BfuI	GTATCC	1 cut(s)	2521
BglII	AGATCT	1 cut(s)	352
BisI	GCNGC	6 cut(s)	208, 211, 553, 2138, 2572, 2696
BlpI	GCTNAGC	1 cut(s)	1001
BlsI	GCNGC	6 cut(s)	209, 212, 554, 2139, 2573, 2697
Bme1390I	CCNGG	8 cut(s)	447, 524, 1082, 1099, 1457, 1892, 1893, 2464
Bme18I	GGWCC	3 cut(s)	371, 701, 2460
BmeT110I	CYCGRG	1 cut(s)	1891
BmgBI	CACGTC	2 cut(s)	440, 1924
BmgT120I	GGNCC	4 cut(s)	371, 701, 1078, 2460
BmiI	GGNNCC	1 cut(s)	2238
BmrFI	CCNGG	8 cut(s)	447, 524, 1082, 1099, 1457, 1892, 1893, 2464
BmrI	ACTGGG	2 cut(s)	184, 2572
BmsI	GCATC	5 cut(s)	631, 1612, 1673, 2269, 2349
BmuI	ACTGGG	2 cut(s)	184, 2572
BpiI	GAAGAC	1 cut(s)	75
Bpu10I	CCTNAGC	2 cut(s)	134, 2604
Bpu1102I	GCTNAGC	1 cut(s)	1001
Bpu14I	TTCGAA	2 cut(s)	806, 2262
BpuEI	CTTGAG	2 cut(s)	97, 729
BpuMI	CCSGG	3 cut(s)	1457, 1892, 1893
Bsa29I	ATCGAT	2 cut(s)	1467, 2274
BsaAI	YACGTR	3 cut(s)	275, 1398, 2196
BsaBI	GATNNNNATC	1 cut(s)	357
BsaHI	GRCGYC	1 cut(s)	2698
BsaJI	CCNNGG	6 cut(s)	423, 446, 522, 1098, 1891, 2613
BsaWI	WCCGGW	2 cut(s)	703, 2164
BsaXI	ACNNNNNCTCC	4 cut(s)	323, 353, 1331, 1361
Bsc4I	CCNNNNNNNGG	5 cut(s)	226, 368, 380, 1945, 2117
Bse118I	RCCGGY	1 cut(s)	1927
Bse1I	ACTGG	7 cut(s)	179, 1515, 1750, 1807, 2122, 2379, 2567
Bse3DI	GCAATG	2 cut(s)	1784, 1931
Bse8I	GATNNNNATC	1 cut(s)	357
BseAI	TCCGGA	2 cut(s)	703, 2164
BseBI	CCWGG	5 cut(s)	447, 524, 1082, 1099, 2464
BseCI	ATCGAT	2 cut(s)	1467, 2274
BseDI	CCNNGG	6 cut(s)	423, 446, 522, 1098, 1891, 2613
BseJI	GATNNNNATC	1 cut(s)	357
BseLI	CCNNNNNNNGG	5 cut(s)	226, 368, 380, 1945, 2117
BseMI	GCAATG	2 cut(s)	1784, 1931
BseMII	CTCAG	4 cut(s)	1015, 1325, 2618, 2655
BseNI	ACTGG	7 cut(s)	179, 1515, 1750, 1807, 2122, 2379, 2567
BsePI	GCGCGC	1 cut(s)	121
BseRI	GAGGAG	1 cut(s)	33
BseSI	GKGCMC	4 cut(s)	523, 608, 663, 2155
BseX3I	CGGCCG	1 cut(s)	2206
BseXI	GCAGC	4 cut(s)	194, 222, 539, 2558
BseYI	CCCAGC	2 cut(s)	2314, 2366
Bsh1236I	CGCG	8 cut(s)	123, 125, 610, 823, 829, 963, 1791, 2140
Bsh1285I	CGRYCG	2 cut(s)	129, 2209
BshFI	GGCC	4 cut(s)	219, 1080, 2054, 2208
BshVI	ATCGAT	2 cut(s)	1467, 2274
BsiEI	CGRYCG	2 cut(s)	129, 2209
BsiHKAI	GWGCWC	8 cut(s)	113, 608, 663, 1002, 1397, 1813, 2065, 2079
BsiHKCI	CYCGRG	1 cut(s)	1891
BsiSI	CCGG	7 cut(s)	704, 1457, 1619, 1892, 1928, 2165, 2205
BslFI	GGGAC	4 cut(s)	33, 1046, 1439, 2423
BslI	CCNNNNNNNGG	5 cut(s)	226, 368, 380, 1945, 2117
BsmAI	GTCTC	3 cut(s)	1035, 1097, 2411
BsmFI	GGGAC	4 cut(s)	33, 1046, 1439, 2423
BsmI	GAATGC	2 cut(s)	967, 1655
BsnI	GGCC	4 cut(s)	219, 1080, 2054, 2208
BsoBI	CYCGRG	1 cut(s)	1891
Bsp119I	TTCGAA	2 cut(s)	806, 2262
Bsp13I	TCCGGA	2 cut(s)	703, 2164
Bsp1720I	GCTNAGC	1 cut(s)	1001
BspACI	CCGC	8 cut(s)	827, 1239, 1684, 1789, 2045, 2138, 2514, 2695
BspANI	GGCC	4 cut(s)	219, 1080, 2054, 2208
BspCNI	CTCAG	4 cut(s)	1014, 1326, 2617, 2656
BspDI	ATCGAT	2 cut(s)	1467, 2274
BspEI	TCCGGA	2 cut(s)	703, 2164
BspFNI	CGCG	8 cut(s)	123, 125, 610, 823, 829, 963, 1791, 2140
BspLI	GGNNCC	1 cut(s)	2238
BspMAI	CTGCAG	2 cut(s)	212, 850
BspMI	ACCTGC	1 cut(s)	634
BspPI	GGATC	8 cut(s)	353, 479, 554, 1301, 2012, 2231, 2244, 2601
BspQI	GCTCTTC	1 cut(s)	1099
BspT104I	TTCGAA	2 cut(s)	806, 2262
BsrDI	GCAATG	2 cut(s)	1784, 1931
BsrFI	RCCGGY	1 cut(s)	1927
BsrI	ACTGG	7 cut(s)	179, 1515, 1750, 1807, 2122, 2379, 2567
BssAI	RCCGGY	1 cut(s)	1927
BssECI	CCNNGG	6 cut(s)	423, 446, 522, 1098, 1891, 2613
BssHII	GCGCGC	1 cut(s)	121
BssNAI	GTATAC	1 cut(s)	69
BssNI	GRCGYC	1 cut(s)	2698
BssT1I	CCWWGG	1 cut(s)	423
Bst1107I	GTATAC	1 cut(s)	69
Bst2UI	CCWGG	5 cut(s)	447, 524, 1082, 1099, 2464
Bst4CI	ACNGT	1 cut(s)	725
Bst6I	CTCTTC	3 cut(s)	846, 1099, 1830
BstACI	GRCGYC	1 cut(s)	2698
BstBAI	YACGTR	3 cut(s)	275, 1398, 2196
BstBI	TTCGAA	2 cut(s)	806, 2262
BstC8I	GCNNGC	9 cut(s)	123, 453, 550, 608, 965, 1497, 1929, 2079, 2151
BstDEI	CTNAG	7 cut(s)	134, 896, 1001, 1334, 1448, 2604, 2664
BstDSI	CCRYGG	1 cut(s)	2613
BstFNI	CGCG	8 cut(s)	123, 125, 610, 823, 829, 963, 1791, 2140
BstHHI	GCGC	5 cut(s)	123, 125, 831, 1007, 1664
BstMAI	GTCTC	3 cut(s)	1035, 1097, 2411
BstMCI	CGRYCG	2 cut(s)	129, 2209
BstNI	CCWGG	5 cut(s)	447, 524, 1082, 1099, 2464
BstNSI	RCATGY	3 cut(s)	1348, 1999, 2024
BstSCI	CCNGG	8 cut(s)	445, 522, 1080, 1097, 1455, 1890, 1891, 2462
BstSFI	CTRYAG	2 cut(s)	208, 846
BstSLI	GKGCMC	4 cut(s)	523, 608, 663, 2155
BstSNI	TACGTA	1 cut(s)	2196
BstUI	CGCG	8 cut(s)	123, 125, 610, 823, 829, 963, 1791, 2140
BstV1I	GCAGC	4 cut(s)	194, 222, 539, 2558
BstV2I	GAAGAC	1 cut(s)	75
BstX2I	RGATCY	3 cut(s)	352, 1306, 2236
BstXI	CCANNNNNNTGG	1 cut(s)	1675
BstYI	RGATCY	3 cut(s)	352, 1306, 2236
BstZ17I	GTATAC	1 cut(s)	69
BstZI	CGGCCG	1 cut(s)	2206
Bsu15I	ATCGAT	2 cut(s)	1467, 2274
BsuI	GTATCC	1 cut(s)	2521
BsuRI	GGCC	4 cut(s)	219, 1080, 2054, 2208
BsuTUI	ATCGAT	2 cut(s)	1467, 2274
BtgI	CCRYGG	1 cut(s)	2613
BtrI	CACGTC	2 cut(s)	440, 1924
BtsI	GCAGTG	1 cut(s)	1813
BtsIMutI	CAGTG	5 cut(s)	978, 1331, 1800, 1813, 2386
BveI	ACCTGC	1 cut(s)	634
Cac8I	GCNNGC	9 cut(s)	123, 453, 550, 608, 965, 1497, 1929, 2079, 2151
CfoI	GCGC	5 cut(s)	123, 125, 831, 1007, 1664
Cfr10I	RCCGGY	1 cut(s)	1927
Cfr13I	GGNCC	4 cut(s)	371, 701, 1078, 2460
Cfr9I	CCCGGG	1 cut(s)	1891
ClaI	ATCGAT	2 cut(s)	1467, 2274
CseI	GACGC	5 cut(s)	812, 975, 1654, 2514, 2687
CsiI	ACCWGGT	1 cut(s)	2462
Csp6I	GTAC	4 cut(s)	586, 1354, 1399, 2536
CviQI	GTAC	4 cut(s)	586, 1354, 1399, 2536
DdeI	CTNAG	7 cut(s)	134, 896, 1001, 1334, 1448, 2604, 2664
DraIII	CACNNNGTG	2 cut(s)	1792, 1945
EaeI	YGGCCR	2 cut(s)	217, 2206
EagI	CGGCCG	1 cut(s)	2206
Eam1104I	CTCTTC	3 cut(s)	846, 1099, 1830
EarI	CTCTTC	3 cut(s)	846, 1099, 1830
Ecl136II	GAGCTC	3 cut(s)	111, 1000, 2077
EclXI	CGGCCG	1 cut(s)	2206
Eco105I	TACGTA	1 cut(s)	2196
Eco130I	CCWWGG	1 cut(s)	423
Eco24I	GRGCYC	3 cut(s)	113, 1002, 2079
Eco32I	GATATC	1 cut(s)	1203
Eco47I	GGWCC	3 cut(s)	371, 701, 2460
Eco52I	CGGCCG	1 cut(s)	2206
Eco53kI	GAGCTC	3 cut(s)	111, 1000, 2077
Eco57I	CTGAAG	2 cut(s)	324, 2370
Eco88I	CYCGRG	1 cut(s)	1891
EcoICRI	GAGCTC	3 cut(s)	111, 1000, 2077
EcoO109I	RGGNCCY	1 cut(s)	2460
EcoRI	GAATTC	2 cut(s)	612, 2669
EcoRII	CCWGG	5 cut(s)	445, 522, 1080, 1097, 2462
EcoRV	GATATC	1 cut(s)	1203
EcoT14I	CCWWGG	1 cut(s)	423
EcoT38I	GRGCYC	3 cut(s)	113, 1002, 2079
ErhI	CCWWGG	1 cut(s)	423
FalI	AAGNNNNNCTT	2 cut(s)	826, 858
FaqI	GGGAC	4 cut(s)	33, 1046, 1439, 2423
FauI	CCCGC	1 cut(s)	1232
FauNDI	CATATG	2 cut(s)	250, 2680
FbaI	TGATCA	1 cut(s)	1428
FblI	GTMKAC	3 cut(s)	68, 2103, 2253
Fnu4HI	GCNGC	6 cut(s)	208, 211, 553, 2138, 2572, 2696
FriOI	GRGCYC	3 cut(s)	113, 1002, 2079
Fsp4HI	GCNGC	6 cut(s)	208, 211, 553, 2138, 2572, 2696
FspBI	CTAG	6 cut(s)	479, 489, 1071, 1872, 2363, 2457
FspI	TGCGCA	1 cut(s)	1663
GlaI	GCGC	5 cut(s)	122, 124, 830, 1006, 1663
GluI	GCNGC	6 cut(s)	208, 211, 553, 2138, 2572, 2696
GsaI	CCCAGC	2 cut(s)	2318, 2370
HaeIII	GGCC	4 cut(s)	219, 1080, 2054, 2208
HapII	CCGG	7 cut(s)	704, 1457, 1619, 1892, 1928, 2165, 2205
HgaI	GACGC	5 cut(s)	812, 975, 1654, 2514, 2687
HhaI	GCGC	5 cut(s)	123, 125, 831, 1007, 1664
Hin1I	GRCGYC	1 cut(s)	2698
Hin6I	GCGC	5 cut(s)	121, 123, 829, 1005, 1662
HinP1I	GCGC	5 cut(s)	121, 123, 829, 1005, 1662
HincII	GTYRAC	3 cut(s)	190, 1424, 2104
HindII	GTYRAC	3 cut(s)	190, 1424, 2104
HindIII	AAGCTT	3 cut(s)	73, 2222, 2265
HpaII	CCGG	7 cut(s)	704, 1457, 1619, 1892, 1928, 2165, 2205
HphI	GGTGA	4 cut(s)	929, 1423, 1778, 2368
HpyAV	CCTTC	7 cut(s)	299, 374, 1445, 1508, 1585, 2044, 2400
HpyCH4III	ACNGT	1 cut(s)	725
HpyCH4IV	ACGT	8 cut(s)	274, 439, 1397, 1584, 1751, 1923, 2195, 2541
HpyF3I	CTNAG	7 cut(s)	134, 896, 1001, 1334, 1448, 2604, 2664
HpySE526I	ACGT	8 cut(s)	274, 439, 1397, 1584, 1751, 1923, 2195, 2541
Hsp92I	GRCGYC	1 cut(s)	2698
HspAI	GCGC	5 cut(s)	121, 123, 829, 1005, 1662
Kpn2I	TCCGGA	2 cut(s)	703, 2164
KroI	GCCGGC	1 cut(s)	1927
KroNI	GCCGGC	1 cut(s)	1929
Ksp22I	TGATCA	1 cut(s)	1428
LguI	GCTCTTC	1 cut(s)	1099
LmnI	GCTCC	3 cut(s)	108, 116, 1392
Lsp1109I	GCAGC	4 cut(s)	194, 222, 539, 2558
LweI	GCATC	5 cut(s)	631, 1612, 1673, 2269, 2349
MabI	ACCWGGT	1 cut(s)	2462
MaeI	CTAG	6 cut(s)	479, 489, 1071, 1872, 2363, 2457
MaeII	ACGT	8 cut(s)	274, 439, 1397, 1584, 1751, 1923, 2195, 2541
MflI	RGATCY	3 cut(s)	352, 1306, 2236
MlsI	TGGCCA	1 cut(s)	219
MluNI	TGGCCA	1 cut(s)	219
MlyI	GAGTC	5 cut(s)	1176, 1461, 1976, 2099, 2210
MmeI	TCCRAC	5 cut(s)	744, 1334, 1386, 1734, 2254
Mox20I	TGGCCA	1 cut(s)	219
MroI	TCCGGA	2 cut(s)	703, 2164
MroNI	GCCGGC	1 cut(s)	1927
MroXI	GAANNNNTTC	4 cut(s)	1137, 1632, 2225, 2393
MscI	TGGCCA	1 cut(s)	219
MseI	TTAA	7 cut(s)	29, 387, 1110, 1149, 1523, 2424, 2445
MslI	CAYNNNNRTG	3 cut(s)	438, 1916, 2381
Msp20I	TGGCCA	1 cut(s)	219
MspA1I	CMGCKG	1 cut(s)	1916
MspI	CCGG	7 cut(s)	704, 1457, 1619, 1892, 1928, 2165, 2205
MspR9I	CCNGG	8 cut(s)	447, 524, 1082, 1099, 1457, 1892, 1893, 2464
Mva1269I	GAATGC	2 cut(s)	967, 1655
MvaI	CCWGG	5 cut(s)	447, 524, 1082, 1099, 2464
MvnI	CGCG	8 cut(s)	123, 125, 610, 823, 829, 963, 1791, 2140
NaeI	GCCGGC	1 cut(s)	1929
NciI	CCSGG	3 cut(s)	1457, 1892, 1893
NdeI	CATATG	2 cut(s)	250, 2680
NgoMIV	GCCGGC	1 cut(s)	1927
NlaIV	GGNNCC	1 cut(s)	2238
NmuCI	GTSAC	5 cut(s)	463, 673, 917, 1576, 2439
NsbI	TGCGCA	1 cut(s)	1663
NspI	RCATGY	3 cut(s)	1348, 1999, 2024
NspV	TTCGAA	2 cut(s)	806, 2262
OliI	CACNNNNGTG	3 cut(s)	438, 1916, 2381
PaqCI	CACCTGC	1 cut(s)	634
PauI	GCGCGC	1 cut(s)	121
PciI	ACATGT	1 cut(s)	1995
PciSI	GCTCTTC	1 cut(s)	1099
PcsI	WCGNNNNNNNCGW	1 cut(s)	375
PctI	GAATGC	2 cut(s)	967, 1655
PdiI	GCCGGC	1 cut(s)	1929
PdmI	GAANNNNTTC	4 cut(s)	1137, 1632, 2225, 2393
PfeI	GAWTC	5 cut(s)	58, 1504, 2259, 2476, 2486
PflMI	CCANNNNNTGG	2 cut(s)	1945, 2117
PfoI	TCCNGGA	1 cut(s)	1455
PkrI	GCNGC	6 cut(s)	209, 212, 554, 2139, 2573, 2697
Ple19I	CGATCG	1 cut(s)	129
PleI	GAGTC	5 cut(s)	1175, 1460, 1975, 2099, 2209
PpsI	GAGTC	5 cut(s)	1175, 1460, 1975, 2099, 2209
Ppu21I	YACGTR	3 cut(s)	275, 1398, 2196
PpuMI	RGGWCCY	1 cut(s)	2460
PscI	ACATGT	1 cut(s)	1995
PshBI	ATTAAT	1 cut(s)	2424
PsiI	TTATAA	1 cut(s)	474
Psp124BI	GAGCTC	3 cut(s)	113, 1002, 2079
Psp1406I	AACGTT	1 cut(s)	1751
Psp5II	RGGWCCY	1 cut(s)	2460
Psp6I	CCWGG	5 cut(s)	445, 522, 1080, 1097, 2462
PspFI	CCCAGC	2 cut(s)	2314, 2366
PspGI	CCWGG	5 cut(s)	445, 522, 1080, 1097, 2462
PspN4I	GGNNCC	1 cut(s)	2238
PspPI	GGNCC	4 cut(s)	371, 701, 1078, 2460
PspPPI	RGGWCCY	1 cut(s)	2460
PstI	CTGCAG	2 cut(s)	212, 850
PsuI	RGATCY	3 cut(s)	352, 1306, 2236
PteI	GCGCGC	1 cut(s)	121
PvuI	CGATCG	1 cut(s)	129
PvuII	CAGCTG	1 cut(s)	1916
RsaI	GTAC	4 cut(s)	587, 1355, 1400, 2537
RsaNI	GTAC	4 cut(s)	586, 1354, 1399, 2536
RseI	CAYNNNNRTG	3 cut(s)	438, 1916, 2381
SacI	GAGCTC	3 cut(s)	113, 1002, 2079
SalI	GTCGAC	1 cut(s)	2102
SapI	GCTCTTC	1 cut(s)	1099
SaqAI	TTAA	7 cut(s)	29, 387, 1110, 1149, 1523, 2424, 2445
SatI	GCNGC	6 cut(s)	208, 211, 553, 2138, 2572, 2696
Sau96I	GGNCC	4 cut(s)	371, 701, 1078, 2460
SchI	GAGTC	5 cut(s)	1176, 1461, 1976, 2099, 2210
ScrFI	CCNGG	8 cut(s)	447, 524, 1082, 1099, 1457, 1892, 1893, 2464
SexAI	ACCWGGT	1 cut(s)	2462
SfaNI	GCATC	5 cut(s)	631, 1612, 1673, 2269, 2349
SfcI	CTRYAG	2 cut(s)	208, 846
SfuI	TTCGAA	2 cut(s)	806, 2262
SinI	GGWCC	3 cut(s)	371, 701, 2460
SmaI	CCCGGG	1 cut(s)	1893
SmiMI	CAYNNNNRTG	3 cut(s)	438, 1916, 2381
SmlI	CTYRAG	2 cut(s)	76, 744
SmoI	CTYRAG	2 cut(s)	76, 744
SnaBI	TACGTA	1 cut(s)	2196
SsiI	CCGC	8 cut(s)	827, 1239, 1684, 1789, 2045, 2138, 2514, 2695
SspI	AATATT	1 cut(s)	1175
SspMI	CTAG	6 cut(s)	479, 489, 1071, 1872, 2363, 2457
SstI	GAGCTC	3 cut(s)	113, 1002, 2079
StyD4I	CCNGG	8 cut(s)	445, 522, 1080, 1097, 1455, 1890, 1891, 2462
StyI	CCWWGG	1 cut(s)	423
TaaI	ACNGT	1 cut(s)	725
TaiI	ACGT	8 cut(s)	277, 442, 1400, 1587, 1754, 1926, 2198, 2544
TaqII	GACCGA	1 cut(s)	359
TatI	WGTACW	1 cut(s)	585
TauI	GCSGC	2 cut(s)	2140, 2698
TfiI	GAWTC	5 cut(s)	58, 1504, 2259, 2476, 2486
Tru1I	TTAA	7 cut(s)	29, 387, 1110, 1149, 1523, 2424, 2445
Tru9I	TTAA	7 cut(s)	29, 387, 1110, 1149, 1523, 2424, 2445
TscAI	CASTG	5 cut(s)	978, 1338, 1807, 1813, 2386
TseFI	GTSAC	5 cut(s)	463, 673, 917, 1576, 2439
TseI	GCWGC	4 cut(s)	207, 210, 552, 2571
Tsp45I	GTSAC	5 cut(s)	463, 673, 917, 1576, 2439
TspDTI	ATGAA	9 cut(s)	189, 278, 891, 936, 1140, 1755, 2161, 2459, 2667
TspGWI	ACGGA	4 cut(s)	103, 450, 2271, 2602
TspMI	CCCGGG	1 cut(s)	1891
TspRI	CASTG	5 cut(s)	978, 1338, 1807, 1813, 2386
Van91I	CCANNNNNTGG	2 cut(s)	1945, 2117
VneI	GTGCAC	2 cut(s)	604, 659
VpaK11BI	GGWCC	3 cut(s)	371, 701, 2460
VspI	ATTAAT	1 cut(s)	2424
XapI	RAATTY	7 cut(s)	25, 612, 926, 1211, 1269, 2390, 2669
XceI	RCATGY	3 cut(s)	1348, 1999, 2024
XmaI	CCCGGG	1 cut(s)	1891
XmiI	GTMKAC	3 cut(s)	68, 2103, 2253
XmnI	GAANNNNTTC	4 cut(s)	1137, 1632, 2225, 2393
XspI	CTAG	6 cut(s)	479, 489, 1071, 1872, 2363, 2457

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.