FvH4_5g36750

Annexin D5-like

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
Physical Location & Seq
Forward (+)
26957431 .. 26959050
1620 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_5g36750.t1

Sequence Viewer

Length: 954 bp
ATGTCTTCTTTGACCGTCCCACCAGTCCTATCCTCCCCAAGAGACGACGCCATCCTCCTCCACAAAGCCTTCAAAGGCTTCGGCTGCGACAAGGACACCGTCATCAACATCCTCGCCCACCGCGACTCCACCCAACGCGCCTACATCAAGCACGAGTACCGCACCATGTACCACGAGGACCTCAACCACCGCCTCTCCTCCGAGCTCAGTGGAAATACCAAGAAAGCCCTCCTTCTCTGGACCCACGACCCTCCCACCCGCGACGCCACAATCGTCCGTGAAGCCCTCACCGGCCCCAACCTCATCGATCTCCGCGCCGCAACTGAAGTCATCTGCTCTCGAACATCCACCCAGATCATGCAGTTCAAACAAGTCTACTTTCAGATGTTCGGTTCTTATCTCGAGCATGACATCGAACTTCAAGCTTCCGGAGATCACAAGAACCTGCTTCTTGCTTACGTGGCCACGCCGAGATATGAAGGTCTTGATTTTGATAGGTACATGGTGGACAAAGACGCGAAGGCTCTGTATAAAGCAGGGGAGAAGAAGCTGGGGACGGATGAGAGGAAGTTCATTGAGATTTTCAGTGGGAGGAGCAGTGCGCATTTGAATGCTGTGAGTGCTGCTTATCACAACATGTACGGGACTTCTTTGAAGAAAGCTGTGAAGAAGGAGACGTCGGGGCTTTTCGAACATGGGCTGGTGACGATTCTGCAGTGTGCTGAGCATCCTGGGAGGTATTTCGCGAAGGTTTTGCATAAATCGATGAAGGGATTGGGGACGGATGATAGTACACTTGTGAGGGTGATTGTATCGAGGGCTGAGATTGATTTGCAGTATATAAAGGCCGAGTATCGGAAGAAGTATGGCAAGAGTTTGGGTGATGCTGTGAAGTCTGAGACTTCTGGGAATTACAGGGATTTTCTTCTGGCTATTATTGGCCCAAGTCATTAG

Protein Analysis

318

Amino Acids

35.69

Weight (kDa)

8.97

Isoelectric Point (pI)

28.49

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Annexin PF00191 16 - 79 2.8e-19 Annexin
Annexin PF00191 88 - 152 3.5e-09 Annexin
Annexin PF00191 172 - 237 1.8e-20 Annexin
Annexin PF00191 247 - 312 4.1e-25 Annexin
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 680
Acc16I TGCGCA 1 cut(s) 603
Acc36I ACCTGC 1 cut(s) 453
AccI GTMKAC 1 cut(s) 375
AccII CGCG 6 cut(s) 123, 138, 261, 315, 518, 746
AccIII TCCGGA 1 cut(s) 428
AciI CCGC 6 cut(s) 121, 160, 190, 259, 313, 318
AcoI YGGCCR 1 cut(s) 462
AcuI CTGAAG 1 cut(s) 345
AcyI GRCGYC 3 cut(s) 48, 264, 677
AfaI GTAC 5 cut(s) 158, 170, 500, 641, 793
AfiI CCNNNNNNNGG 1 cut(s) 855
AflIII ACRYGT 1 cut(s) 636
AgsI TTSAA 5 cut(s) 73, 367, 422, 610, 655
AjnI CCWGG 1 cut(s) 730
AluBI AGCT 4 cut(s) 205, 425, 550, 662
AluI AGCT 4 cut(s) 205, 425, 550, 662
Alw21I GWGCWC 1 cut(s) 207
Alw26I GTCTC 3 cut(s) 36, 668, 893
Ama87I CYCGRG 1 cut(s) 401
Aor13HI TCCGGA 1 cut(s) 428
AoxI GGCC 4 cut(s) 292, 462, 846, 940
ApeKI GCWGC 2 cut(s) 84, 623
AspLEI GCGC 3 cut(s) 140, 317, 604
AspS9I GGNCC 4 cut(s) 178, 240, 293, 941
AsuHPI GGTGA 4 cut(s) 280, 715, 817, 893
AsuII TTCGAA 1 cut(s) 690
AvaI CYCGRG 1 cut(s) 401
AvaII GGWCC 2 cut(s) 178, 240
BalI TGGCCA 1 cut(s) 464
BanII GRGCYC 1 cut(s) 207
BauI CACGAG 2 cut(s) 152, 173
Bbv12I GWGCWC 1 cut(s) 207
BbvI GCAGC 2 cut(s) 71, 610
BccI CCATC 1 cut(s) 59
BcgI CGANNNNNNTGC 2 cut(s) 736, 770
BciT130I CCWGG 1 cut(s) 732
BcoDI GTCTC 3 cut(s) 36, 668, 893
BfmI CTRYAG 1 cut(s) 713
BfuAI ACCTGC 1 cut(s) 453
BisI GCNGC 3 cut(s) 85, 318, 624
BlpI GCTNAGC 1 cut(s) 723
BlsI GCNGC 3 cut(s) 86, 319, 625
Bme1390I CCNGG 1 cut(s) 732
Bme18I GGWCC 2 cut(s) 178, 240
BmeT110I CYCGRG 1 cut(s) 401
BmgT120I GGNCC 4 cut(s) 178, 240, 293, 941
BmiI GGNNCC 2 cut(s) 242, 295
BmrFI CCNGG 1 cut(s) 732
BmsI GCATC 2 cut(s) 736, 874
Bpu1102I GCTNAGC 1 cut(s) 723
Bpu14I TTCGAA 1 cut(s) 690
Bsa29I ATCGAT 2 cut(s) 306, 764
BsaAI YACGTR 1 cut(s) 460
BsaHI GRCGYC 3 cut(s) 48, 264, 677
BsaJI CCNNGG 1 cut(s) 731
BsaWI WCCGGW 1 cut(s) 428
BsaXI ACNNNNNCTCC 6 cut(s) 110, 140, 179, 209, 583, 613
Bsc4I CCNNNNNNNGG 1 cut(s) 855
Bse118I RCCGGY 1 cut(s) 290
Bse1I ACTGG 1 cut(s) 23
BseAI TCCGGA 1 cut(s) 428
BseBI CCWGG 1 cut(s) 732
BseCI ATCGAT 2 cut(s) 306, 764
BseDI CCNNGG 1 cut(s) 731
BseGI GGATG 6 cut(s) 51, 108, 344, 565, 727, 790
BseLI CCNNNNNNNGG 1 cut(s) 855
BseMII CTCAG 4 cut(s) 220, 714, 813, 888
BseNI ACTGG 1 cut(s) 23
BseRI GAGGAG 3 cut(s) 47, 187, 607
BseXI GCAGC 2 cut(s) 71, 610
BseYI CCCAGC 1 cut(s) 550
Bsh1236I CGCG 6 cut(s) 123, 138, 261, 315, 518, 746
BshFI GGCC 4 cut(s) 294, 464, 848, 942
BshVI ATCGAT 2 cut(s) 306, 764
BsiHKAI GWGCWC 1 cut(s) 207
BsiHKCI CYCGRG 1 cut(s) 401
BsiSI CCGG 2 cut(s) 291, 429
BslFI GGGAC 4 cut(s) 2, 568, 658, 793
BslI CCNNNNNNNGG 1 cut(s) 855
BsmAI GTCTC 3 cut(s) 36, 668, 893
BsmBI CGTCTC 2 cut(s) 36, 668
BsmFI GGGAC 4 cut(s) 2, 568, 658, 793
BsmI GAATGC 1 cut(s) 616
BsnI GGCC 4 cut(s) 294, 464, 848, 942
BsoBI CYCGRG 1 cut(s) 401
Bsp119I TTCGAA 1 cut(s) 690
Bsp1286I GDGCHC 1 cut(s) 207
Bsp13I TCCGGA 1 cut(s) 428
Bsp143I GATC 3 cut(s) 307, 354, 433
Bsp1720I GCTNAGC 1 cut(s) 723
Bsp68I TCGCGA 1 cut(s) 746
BspACI CCGC 6 cut(s) 121, 160, 190, 259, 313, 318
BspANI GGCC 4 cut(s) 294, 464, 848, 942
BspCNI CTCAG 4 cut(s) 219, 715, 814, 889
BspDI ATCGAT 2 cut(s) 306, 764
BspEI TCCGGA 1 cut(s) 428
BspFNI CGCG 6 cut(s) 123, 138, 261, 315, 518, 746
BspLI GGNNCC 2 cut(s) 242, 295
BspMAI CTGCAG 1 cut(s) 717
BspMI ACCTGC 1 cut(s) 453
BspT104I TTCGAA 1 cut(s) 690
BsrFI RCCGGY 1 cut(s) 290
BsrI ACTGG 1 cut(s) 23
BssAI RCCGGY 1 cut(s) 290
BssECI CCNNGG 1 cut(s) 731
BssMI GATC 3 cut(s) 307, 354, 433
BssNI GRCGYC 3 cut(s) 48, 264, 677
BssSI CACGAG 2 cut(s) 152, 173
Bst2BI CACGAG 2 cut(s) 152, 173
Bst2UI CCWGG 1 cut(s) 732
Bst4CI ACNGT 2 cut(s) 16, 100
BstACI GRCGYC 3 cut(s) 48, 264, 677
BstBAI YACGTR 1 cut(s) 460
BstBI TTCGAA 1 cut(s) 690
BstDEI CTNAG 4 cut(s) 206, 723, 822, 897
BstF5I GGATG 6 cut(s) 51, 108, 344, 565, 727, 790
BstFNI CGCG 6 cut(s) 123, 138, 261, 315, 518, 746
BstHHI GCGC 3 cut(s) 140, 317, 604
BstKTI GATC 3 cut(s) 310, 357, 436
BstMAI GTCTC 3 cut(s) 36, 668, 893
BstMBI GATC 3 cut(s) 307, 354, 433
BstMWI GCNNNNNNNGC 3 cut(s) 84, 461, 620
BstNI CCWGG 1 cut(s) 732
BstNSI RCATGY 1 cut(s) 640
BstSCI CCNGG 1 cut(s) 730
BstSFI CTRYAG 1 cut(s) 713
BstUI CGCG 6 cut(s) 123, 138, 261, 315, 518, 746
BstV1I GCAGC 2 cut(s) 71, 610
Bsu15I ATCGAT 2 cut(s) 306, 764
BsuRI GGCC 4 cut(s) 294, 464, 848, 942
BsuTUI ATCGAT 2 cut(s) 306, 764
BtsCI GGATG 6 cut(s) 51, 108, 344, 565, 727, 790
BtsI GCAGTG 2 cut(s) 604, 722
BtsIMutI CAGTG 4 cut(s) 214, 592, 604, 722
BtuMI TCGCGA 1 cut(s) 746
BveI ACCTGC 1 cut(s) 453
CfoI GCGC 3 cut(s) 140, 317, 604
Cfr10I RCCGGY 1 cut(s) 290
Cfr13I GGNCC 4 cut(s) 178, 240, 293, 941
ClaI ATCGAT 2 cut(s) 306, 764
CseI GACGC 3 cut(s) 56, 272, 524
Csp6I GTAC 5 cut(s) 157, 169, 499, 640, 792
CviAII CATG 6 cut(s) 166, 358, 407, 502, 637, 695
CviQI GTAC 5 cut(s) 157, 169, 499, 640, 792
DdeI CTNAG 4 cut(s) 206, 723, 822, 897
DpnI GATC 3 cut(s) 309, 356, 435
DpnII GATC 3 cut(s) 307, 354, 433
EaeI YGGCCR 1 cut(s) 462
Ecl136II GAGCTC 1 cut(s) 205
Eco24I GRGCYC 1 cut(s) 207
Eco47I GGWCC 2 cut(s) 178, 240
Eco53kI GAGCTC 1 cut(s) 205
Eco57I CTGAAG 1 cut(s) 345
Eco88I CYCGRG 1 cut(s) 401
EcoICRI GAGCTC 1 cut(s) 205
EcoO109I RGGNCCY 1 cut(s) 178
EcoRII CCWGG 1 cut(s) 730
EcoT38I GRGCYC 1 cut(s) 207
Esp3I CGTCTC 2 cut(s) 36, 668
FaeI CATG 6 cut(s) 169, 361, 410, 505, 640, 698
FalI AAGNNNNNCTT 2 cut(s) 216, 248
FaqI GGGAC 4 cut(s) 2, 568, 658, 793
FatI CATG 6 cut(s) 165, 357, 406, 501, 636, 694
FauI CCCGC 1 cut(s) 266
FblI GTMKAC 1 cut(s) 375
Fnu4HI GCNGC 3 cut(s) 85, 318, 624
FokI GGATG 6 cut(s) 38, 95, 331, 572, 714, 797
FriOI GRGCYC 1 cut(s) 207
Fsp4HI GCNGC 3 cut(s) 85, 318, 624
FspAI RTGCGCAY 1 cut(s) 603
FspI TGCGCA 1 cut(s) 603
GlaI GCGC 3 cut(s) 139, 316, 603
GluI GCNGC 3 cut(s) 85, 318, 624
GsaI CCCAGC 1 cut(s) 554
HaeIII GGCC 4 cut(s) 294, 464, 848, 942
HapII CCGG 2 cut(s) 291, 429
HgaI GACGC 3 cut(s) 56, 272, 524
HhaI GCGC 3 cut(s) 140, 317, 604
Hin1I GRCGYC 3 cut(s) 48, 264, 677
Hin1II CATG 6 cut(s) 169, 361, 410, 505, 640, 698
Hin6I GCGC 3 cut(s) 138, 315, 602
HinP1I GCGC 3 cut(s) 138, 315, 602
HindIII AAGCTT 1 cut(s) 423
HinfI GANTC 2 cut(s) 125, 709
HpaII CCGG 2 cut(s) 291, 429
HphI GGTGA 4 cut(s) 280, 715, 817, 893
Hpy166II GTNNAC 3 cut(s) 376, 508, 794
Hpy188I TCNGA 4 cut(s) 202, 384, 858, 898
Hpy188III TCNNGA 6 cut(s) 238, 339, 401, 429, 485, 745
Hpy8I GTNNAC 3 cut(s) 376, 508, 794
Hpy99I CGWCG 3 cut(s) 50, 266, 682
HpyAV CCTTC 7 cut(s) 79, 242, 473, 514, 664, 742, 763
HpyCH4III ACNGT 2 cut(s) 16, 100
HpyCH4IV ACGT 2 cut(s) 459, 677
HpyCH4V TGCA 4 cut(s) 361, 715, 757, 835
HpyF10VI GCNNNNNNNGC 3 cut(s) 84, 461, 620
HpyF3I CTNAG 4 cut(s) 206, 723, 822, 897
HpySE526I ACGT 2 cut(s) 459, 677
Hsp92I GRCGYC 3 cut(s) 48, 264, 677
Hsp92II CATG 6 cut(s) 169, 361, 410, 505, 640, 698
HspAI GCGC 3 cut(s) 138, 315, 602
Kpn2I TCCGGA 1 cut(s) 428
Kzo9I GATC 3 cut(s) 307, 354, 433
LmnI GCTCC 1 cut(s) 594
Lsp1109I GCAGC 2 cut(s) 71, 610
LweI GCATC 2 cut(s) 736, 874
MaeII ACGT 2 cut(s) 459, 677
MaeIII GTNAC 1 cut(s) 703
MalI GATC 3 cut(s) 309, 356, 435
MboI GATC 3 cut(s) 307, 354, 433
MboII GAAGA 5 cut(s) 556, 667, 679, 871, 917
MhlI GDGCHC 1 cut(s) 207
MlsI TGGCCA 1 cut(s) 464
MluCI AATT 1 cut(s) 910
MluNI TGGCCA 1 cut(s) 464
MlyI GAGTC 1 cut(s) 119
Mox20I TGGCCA 1 cut(s) 464
MroI TCCGGA 1 cut(s) 428
MscI TGGCCA 1 cut(s) 464
MslI CAYNNNNRTG 1 cut(s) 609
Msp20I TGGCCA 1 cut(s) 464
MspI CCGG 2 cut(s) 291, 429
MspR9I CCNGG 1 cut(s) 732
Mva1269I GAATGC 1 cut(s) 616
MvaI CCWGG 1 cut(s) 732
MvnI CGCG 6 cut(s) 123, 138, 261, 315, 518, 746
MwoI GCNNNNNNNGC 3 cut(s) 84, 461, 620
NdeII GATC 3 cut(s) 307, 354, 433
NlaIII CATG 6 cut(s) 169, 361, 410, 505, 640, 698
NlaIV GGNNCC 2 cut(s) 242, 295
NmeAIII GCCGAG 2 cut(s) 495, 874
NmuCI GTSAC 1 cut(s) 703
NruI TCGCGA 1 cut(s) 746
NsbI TGCGCA 1 cut(s) 603
NspI RCATGY 1 cut(s) 640
NspV TTCGAA 1 cut(s) 690
PaeR7I CTCGAG 1 cut(s) 401
PciI ACATGT 1 cut(s) 636
PcsI WCGNNNNNNNCGW 2 cut(s) 120, 270
PctI GAATGC 1 cut(s) 616
PfeI GAWTC 1 cut(s) 709
PflFI GACNNNGTC 1 cut(s) 98
PkrI GCNGC 3 cut(s) 86, 319, 625
PleI GAGTC 1 cut(s) 119
PpsI GAGTC 1 cut(s) 119
Ppu21I YACGTR 1 cut(s) 460
PpuMI RGGWCCY 1 cut(s) 178
PscI ACATGT 1 cut(s) 636
Psp124BI GAGCTC 1 cut(s) 207
Psp5II RGGWCCY 1 cut(s) 178
Psp6I CCWGG 1 cut(s) 730
PspFI CCCAGC 1 cut(s) 550
PspGI CCWGG 1 cut(s) 730
PspN4I GGNNCC 2 cut(s) 242, 295
PspPI GGNCC 4 cut(s) 178, 240, 293, 941
PspPPI RGGWCCY 1 cut(s) 178
PstI CTGCAG 1 cut(s) 717
PsyI GACNNNGTC 1 cut(s) 98
RruI TCGCGA 1 cut(s) 746
RsaI GTAC 5 cut(s) 158, 170, 500, 641, 793
RsaNI GTAC 5 cut(s) 157, 169, 499, 640, 792
RseI CAYNNNNRTG 1 cut(s) 609
SacI GAGCTC 1 cut(s) 207
SatI GCNGC 3 cut(s) 85, 318, 624
Sau3AI GATC 3 cut(s) 307, 354, 433
Sau96I GGNCC 4 cut(s) 178, 240, 293, 941
SchI GAGTC 1 cut(s) 119
ScrFI CCNGG 1 cut(s) 732
SduI GDGCHC 1 cut(s) 207
SfaNI GCATC 2 cut(s) 736, 874
SfcI CTRYAG 1 cut(s) 713
Sfr274I CTCGAG 1 cut(s) 401
SfuI TTCGAA 1 cut(s) 690
SinI GGWCC 2 cut(s) 178, 240
SlaI CTCGAG 1 cut(s) 401
SmiMI CAYNNNNRTG 1 cut(s) 609
SmlI CTYRAG 1 cut(s) 401
SmoI CTYRAG 1 cut(s) 401
Sse9I AATT 1 cut(s) 910
SsiI CCGC 6 cut(s) 121, 160, 190, 259, 313, 318
SstI GAGCTC 1 cut(s) 207
StyD4I CCNGG 1 cut(s) 730
TaaI ACNGT 2 cut(s) 16, 100
TaiI ACGT 2 cut(s) 462, 680
TaqI TCGA 7 cut(s) 306, 340, 402, 414, 690, 764, 815
TasI AATT 1 cut(s) 910
TatI WGTACW 1 cut(s) 791
TauI GCSGC 1 cut(s) 320
TfiI GAWTC 1 cut(s) 709
TscAI CASTG 4 cut(s) 214, 592, 604, 722
TseFI GTSAC 1 cut(s) 703
TseI GCWGC 2 cut(s) 84, 623
Tsp45I GTSAC 1 cut(s) 703
TspDTI ATGAA 3 cut(s) 492, 562, 782
TspGWI ACGGA 3 cut(s) 266, 572, 797
TspRI CASTG 4 cut(s) 214, 592, 604, 722
Tth111I GACNNNGTC 1 cut(s) 98
VpaK11BI GGWCC 2 cut(s) 178, 240
XceI RCATGY 1 cut(s) 640
XhoI CTCGAG 1 cut(s) 401
XmiI GTMKAC 1 cut(s) 375
ZraI GACGTC 1 cut(s) 678
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.