Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0001905

Physical Location & Seq

Genomic Coordinates Reverse (-)

42771527 .. 42773948

Gene Structure 2422 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G521500.4

Sequence Viewer

CDS Protein Promoter (2k)

Length: 954 bp

ATGGCCTCTGTGATCATTCCACCAGTGCTTTCTTCTCCCAGGGACGATGCAATCCAACTCCACCGCGCCTTCAAAGGGTTTGGCTGCGACACGACCACCGTCATCAACATCCTCGCCCACAGAGACGCAACGCAGCGAGCCTACCTCAAGCAAGAGTACAAAACCATGTACCATGAGGAGCTCAGCAAGCGCCTCTCCTCAGAGCTCAGCGGAAACACCAAGAAATCGGTCTTGCTCTGGATGCACGACCCAGCAACGAGAGACGCCACCATAATCAGGCAGGCTCTGGGCGGAGAAGCTGTTGTTGATCTCAAAGCAGCCACCGAAGTCATCTGCTCAAGAACCCCATCTCAGATCCTGCAATTCAAGAACATCTACTTTGCAACTTTTGGGGTTTATCTGGAGCACGATATCGGGTTTCAGGCTTCTGGGGATCACAAAAATTTGCTGCTTGCTTATGTTGGGACGCCGAGGTATGAGGGTCTAGAAGTTGACAGAGCGACGGTGGAGTACGACGCCAAGGCTCTGTTCAAGGCAGGGGAGAAGAGGTTGGGGACGGATGAGAAGACCTTCGTACAGATTTTCAGTGGGAGGAGCAGCGCCCATTTGGCTGCTGTGAGTGCTGCTTACCATAGCATGTATGGGAGTTCACTGGAGAAGGCTGTGAAGAAGGAGACTTCTGGGTATTTTGAGCATGCCCTTTTGACCATTTTGCGCTGCGCTGAGCATCCTGGGATGTATTTTGCCAAGGTTCTGCACAAGGCTATGAAGGGTTTGGGCACAGATGACAGTACTCTTTTGAGGGTGATTGTTTCAAGGGCTGAGATTGATTTGCAGTTCATAAAGGCAGAGTACAGGAAGAAGTATGGCAAGACTTTGAATGATGCTGTTCATTCAGAGACATCTGGGAATTACAGGGCCTTTCTTCTGGCTCTTTTAGGCCCCAATCATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000902 GO:0000904 GO:0001101 GO:0003006 GO:0003674 GO:0003779 GO:0005488 GO:0005509 GO:0005515 GO:0005543 GO:0006950 GO:0006970 GO:0007275 GO:0008092 GO:0008150 GO:0008289 GO:0009266 GO:0009314 GO:0009408 GO:0009409 GO:0009414 GO:0009415 GO:0009416 GO:0009555 GO:0009628 GO:0009639 GO:0009651 GO:0009653 GO:0009826 GO:0009846 GO:0009856 GO:0009860 GO:0009932 GO:0009987 GO:0010035 GO:0016043 GO:0016049 GO:0022414 GO:0030154 GO:0032501 GO:0032502 GO:0032989 GO:0040007 GO:0042221 GO:0043167 GO:0043168 GO:0043169 GO:0044706 GO:0044877 GO:0046872 GO:0048229 GO:0048468 GO:0048588 GO:0048589 GO:0048856 GO:0048868 GO:0048869 GO:0050896 GO:0051015 GO:0051704 GO:0060560 GO:0071840 GO:1901700

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Annexin

Protein Analysis

318

Amino Acids

35.25

Weight (kDa)

8.89

Isoelectric Point (pI)

33.23

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001905)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G68090 AT1G68090 AT5G10220 AT5G10230
fragaria_vesca	FvH4_5g36750 FvH4_5g36780
malus_domestica	MD08G1187000.v1.1 MD15G1372900.v1.1 MD16G1013400.v1.1
prunus_persica	Prupe.1G337800_v2.0.a1 Prupe.1G337800_v2.0.a1 Prupe.1G521500_v2.0.a1 Prupe.1G521500_v2.0.a1 Prupe.1G521500_v2.0.a1 Prupe.1G521500_v2.0.a1
pyrus_communis	pycom08g16080 pycom15g33390
rosa_chinensis	RchiOBHm_Chr4g0433651 RchiOBHm_Chr7g0242801 RchiOBHm_Chr7g0242891
rosa_laevigata	RLG00000000871 RLG00000000878 RLG00000006741
rosa_multiflora	Rmu_sc0000312.1_g000020 Rmu_sc0004165.1_g000047 Rmu_sc0004165.1_g000053 Rmu_sc0007085.1_g000001 Rmu_sc0007085.1_g000006
rosa_roxburghii	Rroxscaffold_5G00375100
rosa_rugosa	Rorug07G0317500 Rorug07G0317600
rosa_samantha	Rh4DG329300 Rh7AG472200 Rh7AG472500 Rh7AG473200 Rh7BG442900 Rh7BG443200 Rh7CG489400 Rh7CG490100 Rh7DG457900 Rh7DG458400
rosa_wichuraiana	Rw4G028130 Rw7G039090 Rw7G039130 Rw7G039340 Rw7G039360

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccII	CGCG	1 cut(s)	66
AciI	CCGC	3 cut(s)	64, 210, 291
AclWI	GGATC	2 cut(s)	349, 441
AcsI	RAATTY	1 cut(s)	442
AcyI	GRCGYC	3 cut(s)	264, 467, 516
AfaI	GTAC	6 cut(s)	158, 170, 512, 576, 793, 854
AfiI	CCNNNNNNNGG	2 cut(s)	75, 276
AgsI	TTSAA	5 cut(s)	73, 367, 532, 816, 880
AjnI	CCWGG	2 cut(s)	38, 730
AjuI	GAANNNNNNNTTGG	2 cut(s)	512, 544
AluBI	AGCT	3 cut(s)	181, 205, 299
AluI	AGCT	3 cut(s)	181, 205, 299
Alw21I	GWGCWC	3 cut(s)	183, 207, 408
Alw26I	GTCTC	4 cut(s)	117, 255, 668, 893
AlwI	GGATC	2 cut(s)	349, 441
AlwNI	CAGNNNCTG	2 cut(s)	286, 358
AoxI	GGCC	3 cut(s)	3, 918, 940
ApeKI	GCWGC	8 cut(s)	84, 133, 317, 448, 597, 611, 623, 717
ApoI	RAATTY	1 cut(s)	442
Asp700I	GAANNNNTTC	1 cut(s)	569
AspLEI	GCGC	5 cut(s)	68, 192, 602, 717, 722
AspS9I	GGNCC	2 cut(s)	918, 941
AsuHPI	GGTGA	1 cut(s)	817
BaeGI	GKGCMC	1 cut(s)	782
BanII	GRGCYC	2 cut(s)	183, 207
BbsI	GAAGAC	1 cut(s)	572
Bbv12I	GWGCWC	3 cut(s)	183, 207, 408
BbvI	GCAGC	8 cut(s)	71, 145, 329, 435, 598, 609, 610, 704
BccI	CCATC	1 cut(s)	355
BciT130I	CCWGG	2 cut(s)	40, 732
BclI	TGATCA	1 cut(s)	12
BcoDI	GTCTC	4 cut(s)	117, 255, 668, 893
BfaI	CTAG	1 cut(s)	485
BfoI	RGCGCY	2 cut(s)	193, 603
BglI	GCCNNNNNGGC	1 cut(s)	608
BisI	GCNGC	8 cut(s)	85, 134, 318, 449, 598, 612, 624, 718
BlpI	GCTNAGC	3 cut(s)	182, 206, 723
BlsI	GCNGC	8 cut(s)	86, 135, 319, 450, 599, 613, 625, 719
BmcAI	AGTACT	1 cut(s)	793
Bme1390I	CCNGG	2 cut(s)	40, 732
BmgT120I	GGNCC	2 cut(s)	918, 941
BmiI	GGNNCC	1 cut(s)	943
BmrFI	CCNGG	2 cut(s)	40, 732
BmsI	GCATC	4 cut(s)	37, 231, 736, 874
BoxI	GACNNNNGTC	1 cut(s)	98
BpiI	GAAGAC	1 cut(s)	572
BplI	GAGNNNNNCTC	2 cut(s)	129, 161
BpmI	CTGGAG	2 cut(s)	422, 674
Bpu1102I	GCTNAGC	3 cut(s)	182, 206, 723
BpuEI	CTTGAG	2 cut(s)	131, 322
BsaHI	GRCGYC	3 cut(s)	264, 467, 516
BsaJI	CCNNGG	6 cut(s)	38, 39, 470, 519, 731, 747
BsaXI	ACNNNNNCTCC	4 cut(s)	285, 315, 533, 563
Bsc4I	CCNNNNNNNGG	2 cut(s)	75, 276
Bse1I	ACTGG	2 cut(s)	23, 657
BseBI	CCWGG	2 cut(s)	40, 732
BseDI	CCNNGG	6 cut(s)	38, 39, 470, 519, 731, 747
BseGI	GGATG	5 cut(s)	108, 246, 565, 727, 741
BseLI	CCNNNNNNNGG	2 cut(s)	75, 276
BseMII	CTCAG	6 cut(s)	196, 213, 220, 365, 714, 813
BseNI	ACTGG	2 cut(s)	23, 657
BseRI	GAGGAG	3 cut(s)	187, 191, 607
BseSI	GKGCMC	1 cut(s)	782
BseXI	GCAGC	8 cut(s)	71, 145, 329, 435, 598, 609, 610, 704
BseYI	CCCAGC	1 cut(s)	250
BsgI	GTGCAG	1 cut(s)	740
Bsh1236I	CGCG	1 cut(s)	66
BshFI	GGCC	3 cut(s)	5, 920, 942
BsiHKAI	GWGCWC	3 cut(s)	183, 207, 408
BslFI	GGGAC	3 cut(s)	56, 478, 568
BslI	CCNNNNNNNGG	2 cut(s)	75, 276
BsmAI	GTCTC	4 cut(s)	117, 255, 668, 893
BsmBI	CGTCTC	2 cut(s)	117, 255
BsmFI	GGGAC	3 cut(s)	56, 478, 568
BsnI	GGCC	3 cut(s)	5, 920, 942
Bsp1286I	GDGCHC	4 cut(s)	183, 207, 408, 782
Bsp143I	GATC	4 cut(s)	12, 307, 354, 433
Bsp1720I	GCTNAGC	3 cut(s)	182, 206, 723
BspACI	CCGC	3 cut(s)	64, 210, 291
BspANI	GGCC	3 cut(s)	5, 920, 942
BspCNI	CTCAG	6 cut(s)	195, 212, 219, 364, 715, 814
BspFNI	CGCG	1 cut(s)	66
BspLI	GGNNCC	1 cut(s)	943
BspPI	GGATC	2 cut(s)	349, 441
BsrI	ACTGG	2 cut(s)	23, 657
BssECI	CCNNGG	6 cut(s)	38, 39, 470, 519, 731, 747
BssMI	GATC	4 cut(s)	12, 307, 354, 433
BssNI	GRCGYC	3 cut(s)	264, 467, 516
BssT1I	CCWWGG	2 cut(s)	519, 747
Bst2UI	CCWGG	2 cut(s)	40, 732
Bst4CI	ACNGT	3 cut(s)	100, 505, 791
Bst6I	CTCTTC	1 cut(s)	539
BstACI	GRCGYC	3 cut(s)	264, 467, 516
BstC8I	GCNNGC	5 cut(s)	138, 188, 282, 453, 696
BstDEI	CTNAG	6 cut(s)	182, 199, 206, 351, 723, 822
BstF5I	GGATG	5 cut(s)	108, 246, 565, 727, 741
BstFNI	CGCG	1 cut(s)	66
BstH2I	RGCGCY	2 cut(s)	193, 603
BstHHI	GCGC	5 cut(s)	68, 192, 602, 717, 722
BstKTI	GATC	4 cut(s)	15, 310, 357, 436
BstMAI	GTCTC	4 cut(s)	117, 255, 668, 893
BstMBI	GATC	4 cut(s)	12, 307, 354, 433
BstMWI	GCNNNNNNNGC	4 cut(s)	187, 241, 608, 620
BstNI	CCWGG	2 cut(s)	40, 732
BstNSI	RCATGY	2 cut(s)	640, 698
BstPAI	GACNNNNGTC	1 cut(s)	98
BstSCI	CCNGG	2 cut(s)	38, 730
BstSLI	GKGCMC	1 cut(s)	782
BstUI	CGCG	1 cut(s)	66
BstV1I	GCAGC	8 cut(s)	71, 145, 329, 435, 598, 609, 610, 704
BstV2I	GAAGAC	1 cut(s)	572
BstX2I	RGATCY	1 cut(s)	354
BstYI	RGATCY	1 cut(s)	354
BsuRI	GGCC	3 cut(s)	5, 920, 942
BtsCI	GGATG	5 cut(s)	108, 246, 565, 727, 741
BtsIMutI	CAGTG	3 cut(s)	30, 592, 650
Cac8I	GCNNGC	5 cut(s)	138, 188, 282, 453, 696
CaiI	CAGNNNCTG	2 cut(s)	286, 358
CfoI	GCGC	5 cut(s)	68, 192, 602, 717, 722
Cfr13I	GGNCC	2 cut(s)	918, 941
CseI	GACGC	4 cut(s)	134, 272, 475, 524
Csp6I	GTAC	6 cut(s)	157, 169, 511, 575, 792, 853
CviAII	CATG	4 cut(s)	166, 173, 637, 695
CviQI	GTAC	6 cut(s)	157, 169, 511, 575, 792, 853
DdeI	CTNAG	6 cut(s)	182, 199, 206, 351, 723, 822
DpnI	GATC	4 cut(s)	14, 309, 356, 435
DpnII	GATC	4 cut(s)	12, 307, 354, 433
Eam1104I	CTCTTC	1 cut(s)	539
EarI	CTCTTC	1 cut(s)	539
EciI	GGCGGA	1 cut(s)	306
Ecl136II	GAGCTC	2 cut(s)	181, 205
Eco130I	CCWWGG	2 cut(s)	519, 747
Eco24I	GRGCYC	2 cut(s)	183, 207
Eco32I	GATATC	1 cut(s)	412
Eco53kI	GAGCTC	2 cut(s)	181, 205
EcoICRI	GAGCTC	2 cut(s)	181, 205
EcoO109I	RGGNCCY	2 cut(s)	918, 941
EcoRII	CCWGG	2 cut(s)	38, 730
EcoRV	GATATC	1 cut(s)	412
EcoT14I	CCWWGG	2 cut(s)	519, 747
EcoT38I	GRGCYC	2 cut(s)	183, 207
ErhI	CCWWGG	2 cut(s)	519, 747
Esp3I	CGTCTC	2 cut(s)	117, 255
FaeI	CATG	4 cut(s)	169, 176, 640, 698
FaqI	GGGAC	3 cut(s)	56, 478, 568
FatI	CATG	4 cut(s)	165, 172, 636, 694
FbaI	TGATCA	1 cut(s)	12
Fnu4HI	GCNGC	8 cut(s)	85, 134, 318, 449, 598, 612, 624, 718
FokI	GGATG	5 cut(s)	95, 253, 572, 714, 748
FriOI	GRGCYC	2 cut(s)	183, 207
Fsp4HI	GCNGC	8 cut(s)	85, 134, 318, 449, 598, 612, 624, 718
FspBI	CTAG	1 cut(s)	485
GlaI	GCGC	5 cut(s)	67, 191, 601, 716, 721
GluI	GCNGC	8 cut(s)	85, 134, 318, 449, 598, 612, 624, 718
GsaI	CCCAGC	1 cut(s)	254
GsuI	CTGGAG	2 cut(s)	422, 674
HaeII	RGCGCY	2 cut(s)	193, 603
HaeIII	GGCC	3 cut(s)	5, 920, 942
HgaI	GACGC	4 cut(s)	134, 272, 475, 524
HhaI	GCGC	5 cut(s)	68, 192, 602, 717, 722
Hin1I	GRCGYC	3 cut(s)	264, 467, 516
Hin1II	CATG	4 cut(s)	169, 176, 640, 698
Hin6I	GCGC	5 cut(s)	66, 190, 600, 715, 720
HinP1I	GCGC	5 cut(s)	66, 190, 600, 715, 720
HincII	GTYRAC	1 cut(s)	493
HindII	GTYRAC	1 cut(s)	493
HphI	GGTGA	1 cut(s)	817
Hpy166II	GTNNAC	2 cut(s)	493, 650
Hpy188I	TCNGA	3 cut(s)	202, 354, 898
Hpy188III	TCNNGA	5 cut(s)	238, 339, 367, 401, 485
Hpy8I	GTNNAC	2 cut(s)	493, 650
Hpy99I	CGWCG	2 cut(s)	505, 518
HpyAV	CCTTC	5 cut(s)	79, 580, 652, 664, 763
HpyCH4III	ACNGT	3 cut(s)	100, 505, 791
HpyCH4V	TGCA	6 cut(s)	50, 244, 361, 383, 757, 835
HpyF10VI	GCNNNNNNNGC	4 cut(s)	187, 241, 608, 620
HpyF3I	CTNAG	6 cut(s)	182, 199, 206, 351, 723, 822
Hsp92I	GRCGYC	3 cut(s)	264, 467, 516
Hsp92II	CATG	4 cut(s)	169, 176, 640, 698
HspAI	GCGC	5 cut(s)	66, 190, 600, 715, 720
Ksp22I	TGATCA	1 cut(s)	12
Kzo9I	GATC	4 cut(s)	12, 307, 354, 433
LmnI	GCTCC	3 cut(s)	178, 403, 594
Lsp1109I	GCAGC	8 cut(s)	71, 145, 329, 435, 598, 609, 610, 704
LweI	GCATC	4 cut(s)	37, 231, 736, 874
MaeI	CTAG	1 cut(s)	485
MalI	GATC	4 cut(s)	14, 309, 356, 435
MboI	GATC	4 cut(s)	12, 307, 354, 433
MboII	GAAGA	6 cut(s)	24, 556, 577, 679, 871, 917
MflI	RGATCY	1 cut(s)	354
MhlI	GDGCHC	4 cut(s)	183, 207, 408, 782
MluCI	AATT	3 cut(s)	362, 442, 910
MmeI	TCCRAC	1 cut(s)	79
MroXI	GAANNNNTTC	1 cut(s)	569
MspA1I	CMGCKG	1 cut(s)	210
MspR9I	CCNGG	2 cut(s)	40, 732
MteI	GCGCNGCGC	1 cut(s)	718
MvaI	CCWGG	2 cut(s)	40, 732
MvnI	CGCG	1 cut(s)	66
MwoI	GCNNNNNNNGC	4 cut(s)	187, 241, 608, 620
NdeII	GATC	4 cut(s)	12, 307, 354, 433
NlaIII	CATG	4 cut(s)	169, 176, 640, 698
NlaIV	GGNNCC	1 cut(s)	943
NmeAIII	GCCGAG	1 cut(s)	495
NspI	RCATGY	2 cut(s)	640, 698
PaeI	GCATGC	1 cut(s)	698
PasI	CCCWGGG	1 cut(s)	39
PdmI	GAANNNNTTC	1 cut(s)	569
PkrI	GCNGC	8 cut(s)	86, 135, 319, 450, 599, 613, 625, 719
PshAI	GACNNNNGTC	1 cut(s)	98
Psp124BI	GAGCTC	2 cut(s)	183, 207
Psp6I	CCWGG	2 cut(s)	38, 730
PspFI	CCCAGC	1 cut(s)	250
PspGI	CCWGG	2 cut(s)	38, 730
PspN4I	GGNNCC	1 cut(s)	943
PspPI	GGNCC	2 cut(s)	918, 941
PstNI	CAGNNNCTG	2 cut(s)	286, 358
PsuI	RGATCY	1 cut(s)	354
RsaI	GTAC	6 cut(s)	158, 170, 512, 576, 793, 854
RsaNI	GTAC	6 cut(s)	157, 169, 511, 575, 792, 853
SacI	GAGCTC	2 cut(s)	183, 207
SatI	GCNGC	8 cut(s)	85, 134, 318, 449, 598, 612, 624, 718
Sau3AI	GATC	4 cut(s)	12, 307, 354, 433
Sau96I	GGNCC	2 cut(s)	918, 941
ScaI	AGTACT	1 cut(s)	793
ScrFI	CCNGG	2 cut(s)	40, 732
SduI	GDGCHC	4 cut(s)	183, 207, 408, 782
SetI	ASST	8 cut(s)	147, 183, 207, 301, 476, 551, 572, 753
SfaNI	GCATC	4 cut(s)	37, 231, 736, 874
SmlI	CTYRAG	2 cut(s)	146, 337
SmoI	CTYRAG	2 cut(s)	146, 337
SphI	GCATGC	1 cut(s)	698
Sse9I	AATT	3 cut(s)	362, 442, 910
SsiI	CCGC	3 cut(s)	64, 210, 291
SspMI	CTAG	1 cut(s)	485
SstI	GAGCTC	2 cut(s)	183, 207
StyD4I	CCNGG	2 cut(s)	38, 730
StyI	CCWWGG	2 cut(s)	519, 747
TaaI	ACNGT	3 cut(s)	100, 505, 791
TaqII	GACCGA	1 cut(s)	217
TasI	AATT	3 cut(s)	362, 442, 910
TatI	WGTACW	3 cut(s)	156, 791, 852
TscAI	CASTG	3 cut(s)	30, 592, 657
TseI	GCWGC	8 cut(s)	84, 133, 317, 448, 597, 611, 623, 717
TspDTI	ATGAA	3 cut(s)	782, 829, 881
TspGWI	ACGGA	1 cut(s)	572
TspRI	CASTG	3 cut(s)	30, 592, 657
XapI	RAATTY	1 cut(s)	442
XbaI	TCTAGA	1 cut(s)	484
XceI	RCATGY	2 cut(s)	640, 698
XcmI	CCANNNNNNNNNTGG	1 cut(s)	638
XmnI	GAANNNNTTC	1 cut(s)	569
XspI	CTAG	1 cut(s)	485
ZrmI	AGTACT	1 cut(s)	793

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.