Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0001905

Physical Location & Seq

Genomic Coordinates Reverse (-)

31834273 .. 31835736

Gene Structure 1464 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G337800.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 951 bp

ATGGCATCTGTGATTATACCACCGATGCCACCTTCGGCCCGTGATGATGCTCTCCATCTCTACCGTGCCTTCAAAGGATTTGGATGCGACACGGCAGCAGTGATCAATATTCTAGGGCACAGAAATGCAACACAGCGTGCTGCCATCCAAAAAGAATACCACGCCACCTACTCCGAAGACCTCAACAAGCGTTTGTCCTCCGAGCTTAGTGGAGAACTCAAGAGAGCAGTGATAATGTGGATGCCTGATCCGGCAACGCGGGACGCCAACATCGTACGGCATGCTTTGGAGGGAGATGTTGATCTCAAAGCTGCCACTGAAGTCATATGTTCTCGAACTCCCTCCCAGATGCGACAATTCAAACAAATCTATTTCTCCAGCTTTGACGTCGACCTTGAGGATGACCTTGCTACTAAATTATCCTCTGGAGATCACAAAAAGTTGCTGGTAGCATACATTAGTGTGCCACGCTACGAAGGTCCAGAATATGATCAAGCGATGGTGCAGAAGGATGCAGAACTTCTCTATAAGGCTGGGGAGAAGAAATTGGGGACGGATGAGAAGGTTTTCATCCAAATTTTCAGTGAAAGAAGCAGGGCACATTTGGTTGCTGTTGGCTCTGCTTATCAAAGTTTGTATGGTCATTCATTGGAAAAGGCAATAACCAAGGAAACATCTGGGTATTTTTTTAATGCACTTTTGACAATTTTGCAGTGTGCTGACCATCCTGGCAAGTATTTTGCAAGGGTTTTACGCAAGGCAATGAAGGGTTTGGGTACGGATGACCCAACACTGATAAGGGTAATTGTGACAAGGGCTGAGATTGATATGCAGTACATAAAGGCAGAATATCGGAATCAATATGGAAAATCATTGCATGATGCAGTTCAATCAGATACCTCTGGACATTACAAGGCCTTTCTTCTCTATCTTTTAGGCACCAACCCTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000902 GO:0000904 GO:0001101 GO:0003006 GO:0003674 GO:0003779 GO:0005488 GO:0005509 GO:0005515 GO:0005543 GO:0006950 GO:0006970 GO:0007275 GO:0008092 GO:0008150 GO:0008289 GO:0009266 GO:0009314 GO:0009408 GO:0009409 GO:0009414 GO:0009415 GO:0009416 GO:0009555 GO:0009628 GO:0009639 GO:0009651 GO:0009653 GO:0009826 GO:0009846 GO:0009856 GO:0009860 GO:0009932 GO:0009987 GO:0010035 GO:0016043 GO:0016049 GO:0022414 GO:0030154 GO:0032501 GO:0032502 GO:0032989 GO:0040007 GO:0042221 GO:0043167 GO:0043168 GO:0043169 GO:0044706 GO:0044877 GO:0046872 GO:0048229 GO:0048468 GO:0048588 GO:0048589 GO:0048856 GO:0048868 GO:0048869 GO:0050896 GO:0051015 GO:0051704 GO:0060560 GO:0071840 GO:1901700

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Annexin

Protein Analysis

317

Amino Acids

35.45

Weight (kDa)

7.72

Isoelectric Point (pI)

31.24

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001905)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G68090 AT1G68090 AT5G10220 AT5G10230
fragaria_vesca	FvH4_5g36750 FvH4_5g36780
malus_domestica	MD08G1187000.v1.1 MD15G1372900.v1.1 MD16G1013400.v1.1
prunus_persica	Prupe.1G337800_v2.0.a1 Prupe.1G337800_v2.0.a1 Prupe.1G521500_v2.0.a1 Prupe.1G521500_v2.0.a1 Prupe.1G521500_v2.0.a1 Prupe.1G521500_v2.0.a1
pyrus_communis	pycom08g16080 pycom15g33390
rosa_chinensis	RchiOBHm_Chr4g0433651 RchiOBHm_Chr7g0242801 RchiOBHm_Chr7g0242891
rosa_laevigata	RLG00000000871 RLG00000000878 RLG00000006741
rosa_multiflora	Rmu_sc0000312.1_g000020 Rmu_sc0004165.1_g000047 Rmu_sc0004165.1_g000053 Rmu_sc0007085.1_g000001 Rmu_sc0007085.1_g000006
rosa_roxburghii	Rroxscaffold_5G00375100
rosa_rugosa	Rorug07G0317500 Rorug07G0317600
rosa_samantha	Rh4DG329300 Rh7AG472200 Rh7AG472500 Rh7AG473200 Rh7BG442900 Rh7BG443200 Rh7CG489400 Rh7CG490100 Rh7DG457900 Rh7DG458400
rosa_wichuraiana	Rw4G028130 Rw7G039090 Rw7G039130 Rw7G039340 Rw7G039360

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	390
AccB1I	GGYRCC	1 cut(s)	938
AccI	GTMKAC	1 cut(s)	390
AccII	CGCG	1 cut(s)	259
AciI	CCGC	1 cut(s)	259
AclWI	GGATC	1 cut(s)	242
AcsI	RAATTY	1 cut(s)	576
AcuI	CTGAAG	1 cut(s)	339
AcyI	GRCGYC	2 cut(s)	264, 387
AdeI	CACNNNGTG	1 cut(s)	137
AfaI	GTAC	3 cut(s)	276, 778, 836
AgsI	TTSAA	3 cut(s)	73, 361, 890
AjnI	CCWGG	1 cut(s)	727
AluBI	AGCT	3 cut(s)	205, 311, 381
AluI	AGCT	3 cut(s)	205, 311, 381
AlwI	GGATC	1 cut(s)	242
AoxI	GGCC	2 cut(s)	36, 915
ApeKI	GCWGC	3 cut(s)	95, 140, 311
ApoI	RAATTY	1 cut(s)	576
Asp700I	GAANNNNTTC	1 cut(s)	566
AspS9I	GGNCC	2 cut(s)	37, 479
AvaII	GGWCC	1 cut(s)	479
BaeGI	GKGCMC	2 cut(s)	120, 601
BanI	GGYRCC	1 cut(s)	938
BbsI	GAAGAC	1 cut(s)	183
BbvI	GCAGC	3 cut(s)	107, 127, 298
BccI	CCATC	4 cut(s)	63, 152, 493, 732
BceAI	ACGGC	2 cut(s)	108, 293
BciT130I	CCWGG	1 cut(s)	729
BclI	TGATCA	2 cut(s)	102, 490
BfaI	CTAG	1 cut(s)	113
BisI	GCNGC	3 cut(s)	96, 141, 312
BlsI	GCNGC	3 cut(s)	97, 142, 313
Bme1390I	CCNGG	1 cut(s)	729
Bme18I	GGWCC	1 cut(s)	479
BmgT120I	GGNCC	2 cut(s)	37, 479
BmiI	GGNNCC	1 cut(s)	940
BmrFI	CCNGG	1 cut(s)	729
BmsI	GCATC	8 cut(s)	14, 15, 37, 74, 231, 339, 502, 871
BpiI	GAAGAC	1 cut(s)	183
BpmI	CTGGAG	2 cut(s)	361, 447
BpuEI	CTTGAG	2 cut(s)	203, 416
BsaBI	GATNNNNATC	1 cut(s)	300
BsaHI	GRCGYC	2 cut(s)	264, 387
BsaJI	CCNNGG	1 cut(s)	666
Bse3DI	GCAATG	2 cut(s)	768, 872
Bse8I	GATNNNNATC	1 cut(s)	300
BseBI	CCWGG	1 cut(s)	729
BseDI	CCNNGG	1 cut(s)	666
BseGI	GGATG	9 cut(s)	89, 144, 246, 406, 517, 562, 570, 724, 787
BseJI	GATNNNNATC	1 cut(s)	300
BseMI	GCAATG	2 cut(s)	768, 872
BseMII	CTCAG	1 cut(s)	810
BseSI	GKGCMC	2 cut(s)	120, 601
BseXI	GCAGC	3 cut(s)	107, 127, 298
BseYI	CCCAGC	1 cut(s)	533
BsgI	GTGCAG	1 cut(s)	524
Bsh1236I	CGCG	1 cut(s)	259
BshFI	GGCC	2 cut(s)	38, 917
BshNI	GGYRCC	1 cut(s)	938
BsiSI	CCGG	1 cut(s)	251
BsiWI	CGTACG	1 cut(s)	274
BslFI	GGGAC	2 cut(s)	275, 565
BsmFI	GGGAC	2 cut(s)	275, 565
BsnI	GGCC	2 cut(s)	38, 917
Bsp1286I	GDGCHC	2 cut(s)	120, 601
Bsp143I	GATC	5 cut(s)	102, 247, 301, 430, 490
BspACI	CCGC	1 cut(s)	259
BspANI	GGCC	2 cut(s)	38, 917
BspCNI	CTCAG	1 cut(s)	811
BspFNI	CGCG	1 cut(s)	259
BspLI	GGNNCC	1 cut(s)	940
BspPI	GGATC	1 cut(s)	242
BspT107I	GGYRCC	1 cut(s)	938
BsrDI	GCAATG	2 cut(s)	768, 872
BssECI	CCNNGG	1 cut(s)	666
BssMI	GATC	5 cut(s)	102, 247, 301, 430, 490
BssNI	GRCGYC	2 cut(s)	264, 387
BssT1I	CCWWGG	1 cut(s)	666
Bst2UI	CCWGG	1 cut(s)	729
Bst4CI	ACNGT	1 cut(s)	65
BstACI	GRCGYC	2 cut(s)	264, 387
BstC8I	GCNNGC	2 cut(s)	138, 282
BstDEI	CTNAG	3 cut(s)	206, 819, 948
BstF5I	GGATG	9 cut(s)	89, 144, 246, 406, 517, 562, 570, 724, 787
BstFNI	CGCG	1 cut(s)	259
BstKTI	GATC	5 cut(s)	105, 250, 304, 433, 493
BstMBI	GATC	5 cut(s)	102, 247, 301, 430, 490
BstNI	CCWGG	1 cut(s)	729
BstNSI	RCATGY	1 cut(s)	284
BstSCI	CCNGG	1 cut(s)	727
BstSLI	GKGCMC	2 cut(s)	120, 601
BstUI	CGCG	1 cut(s)	259
BstV1I	GCAGC	3 cut(s)	107, 127, 298
BstV2I	GAAGAC	1 cut(s)	183
BsuRI	GGCC	2 cut(s)	38, 917
BtgZI	GCGATG	1 cut(s)	512
BtsCI	GGATG	9 cut(s)	89, 144, 246, 406, 517, 562, 570, 724, 787
BtsI	GCAGTG	3 cut(s)	105, 234, 719
BtsIMutI	CAGTG	6 cut(s)	105, 234, 315, 589, 719, 791
Cac8I	GCNNGC	2 cut(s)	138, 282
Cfr13I	GGNCC	2 cut(s)	37, 479
CseI	GACGC	1 cut(s)	272
Csp6I	GTAC	3 cut(s)	275, 777, 835
CviAII	CATG	2 cut(s)	281, 878
CviJI	RGCY	8 cut(s)	38, 205, 311, 381, 533, 618, 818, 917
CviKI_1	RGCY	8 cut(s)	38, 205, 311, 381, 533, 618, 818, 917
CviQI	GTAC	3 cut(s)	275, 777, 835
DdeI	CTNAG	3 cut(s)	206, 819, 948
DpnI	GATC	5 cut(s)	104, 249, 303, 432, 492
DpnII	GATC	5 cut(s)	102, 247, 301, 430, 490
DraIII	CACNNNGTG	1 cut(s)	137
Eco130I	CCWWGG	1 cut(s)	666
Eco147I	AGGCCT	1 cut(s)	917
Eco47I	GGWCC	1 cut(s)	479
Eco57I	CTGAAG	1 cut(s)	339
EcoRII	CCWGG	1 cut(s)	727
EcoT14I	CCWWGG	1 cut(s)	666
ErhI	CCWWGG	1 cut(s)	666
FaeI	CATG	2 cut(s)	284, 881
FaqI	GGGAC	2 cut(s)	275, 565
FatI	CATG	2 cut(s)	280, 877
FauI	CCCGC	1 cut(s)	252
FauNDI	CATATG	1 cut(s)	326
FbaI	TGATCA	2 cut(s)	102, 490
FblI	GTMKAC	1 cut(s)	390
Fnu4HI	GCNGC	3 cut(s)	96, 141, 312
FokI	GGATG	9 cut(s)	96, 131, 253, 413, 524, 557, 569, 711, 794
Fsp4HI	GCNGC	3 cut(s)	96, 141, 312
FspBI	CTAG	1 cut(s)	113
GluI	GCNGC	3 cut(s)	96, 141, 312
GsaI	CCCAGC	1 cut(s)	537
GsuI	CTGGAG	2 cut(s)	361, 447
HaeIII	GGCC	2 cut(s)	38, 917
HapII	CCGG	1 cut(s)	251
HgaI	GACGC	1 cut(s)	272
Hin1I	GRCGYC	2 cut(s)	264, 387
Hin1II	CATG	2 cut(s)	284, 881
HincII	GTYRAC	1 cut(s)	391
HindII	GTYRAC	1 cut(s)	391
HinfI	GANTC	1 cut(s)	856
HpaII	CCGG	1 cut(s)	251
Hpy166II	GTNNAC	1 cut(s)	391
Hpy188I	TCNGA	4 cut(s)	175, 202, 855, 895
Hpy188III	TCNNGA	5 cut(s)	220, 333, 426, 482, 903
Hpy8I	GTNNAC	1 cut(s)	391
Hpy99I	CGWCG	1 cut(s)	392
HpyAV	CCTTC	6 cut(s)	42, 79, 470, 502, 556, 760
HpyCH4III	ACNGT	1 cut(s)	65
HpyCH4IV	ACGT	1 cut(s)	387
HpyCH4V	TGCA	9 cut(s)	128, 505, 515, 695, 712, 743, 832, 877, 884
HpyF3I	CTNAG	3 cut(s)	206, 819, 948
HpySE526I	ACGT	1 cut(s)	387
Hsp92I	GRCGYC	2 cut(s)	264, 387
Hsp92II	CATG	2 cut(s)	284, 881
Ksp22I	TGATCA	2 cut(s)	102, 490
Kzo9I	GATC	5 cut(s)	102, 247, 301, 430, 490
Lsp1109I	GCAGC	3 cut(s)	107, 127, 298
LweI	GCATC	8 cut(s)	14, 15, 37, 74, 231, 339, 502, 871
MaeI	CTAG	1 cut(s)	113
MaeII	ACGT	1 cut(s)	387
MaeIII	GTNAC	1 cut(s)	808
MalI	GATC	5 cut(s)	104, 249, 303, 432, 492
MboI	GATC	5 cut(s)	102, 247, 301, 430, 490
MboII	GAAGA	3 cut(s)	188, 553, 914
MhlI	GDGCHC	2 cut(s)	120, 601
MluCI	AATT	6 cut(s)	356, 416, 545, 576, 705, 804
MnlI	CCTC	7 cut(s)	191, 208, 283, 352, 391, 433, 910
MroXI	GAANNNNTTC	1 cut(s)	566
MseI	TTAA	1 cut(s)	690
MslI	CAYNNNNRTG	2 cut(s)	123, 461
MspI	CCGG	1 cut(s)	251
MspR9I	CCNGG	1 cut(s)	729
MvaI	CCWGG	1 cut(s)	729
MvnI	CGCG	1 cut(s)	259
NdeI	CATATG	1 cut(s)	326
NdeII	GATC	5 cut(s)	102, 247, 301, 430, 490
NlaIII	CATG	2 cut(s)	284, 881
NlaIV	GGNNCC	1 cut(s)	940
NmuCI	GTSAC	1 cut(s)	808
NspI	RCATGY	1 cut(s)	284
PaeI	GCATGC	1 cut(s)	284
PceI	AGGCCT	1 cut(s)	917
PcsI	WCGNNNNNNNCGW	1 cut(s)	270
PdmI	GAANNNNTTC	1 cut(s)	566
PfeI	GAWTC	1 cut(s)	856
Pfl23II	CGTACG	1 cut(s)	274
PkrI	GCNGC	3 cut(s)	97, 142, 313
Psp6I	CCWGG	1 cut(s)	727
PspFI	CCCAGC	1 cut(s)	533
PspGI	CCWGG	1 cut(s)	727
PspLI	CGTACG	1 cut(s)	274
PspN4I	GGNNCC	1 cut(s)	940
PspPI	GGNCC	2 cut(s)	37, 479
RsaI	GTAC	3 cut(s)	276, 778, 836
RsaNI	GTAC	3 cut(s)	275, 777, 835
RseI	CAYNNNNRTG	2 cut(s)	123, 461
SalI	GTCGAC	1 cut(s)	389
SaqAI	TTAA	1 cut(s)	690
SatI	GCNGC	3 cut(s)	96, 141, 312
Sau3AI	GATC	5 cut(s)	102, 247, 301, 430, 490
Sau96I	GGNCC	2 cut(s)	37, 479
ScrFI	CCNGG	1 cut(s)	729
SduI	GDGCHC	2 cut(s)	120, 601
SfaNI	GCATC	8 cut(s)	14, 15, 37, 74, 231, 339, 502, 871
SinI	GGWCC	1 cut(s)	479
SmiMI	CAYNNNNRTG	2 cut(s)	123, 461
SmlI	CTYRAG	2 cut(s)	218, 395
SmoI	CTYRAG	2 cut(s)	218, 395
SphI	GCATGC	1 cut(s)	284
Sse9I	AATT	6 cut(s)	356, 416, 545, 576, 705, 804
SseBI	AGGCCT	1 cut(s)	917
SsiI	CCGC	1 cut(s)	259
SspI	AATATT	1 cut(s)	109
SspMI	CTAG	1 cut(s)	113
StuI	AGGCCT	1 cut(s)	917
StyD4I	CCNGG	1 cut(s)	727
StyI	CCWWGG	1 cut(s)	666
TaaI	ACNGT	1 cut(s)	65
TaiI	ACGT	1 cut(s)	390
TaqI	TCGA	2 cut(s)	334, 390
TasI	AATT	6 cut(s)	356, 416, 545, 576, 705, 804
TatI	WGTACW	1 cut(s)	834
TfiI	GAWTC	1 cut(s)	856
Tru1I	TTAA	1 cut(s)	690
Tru9I	TTAA	1 cut(s)	690
TscAI	CASTG	6 cut(s)	105, 234, 322, 589, 719, 798
TseFI	GTSAC	1 cut(s)	808
TseI	GCWGC	3 cut(s)	95, 140, 311
Tsp45I	GTSAC	1 cut(s)	808
TspDTI	ATGAA	3 cut(s)	559, 636, 779
TspGWI	ACGGA	2 cut(s)	569, 794
TspRI	CASTG	6 cut(s)	105, 234, 322, 589, 719, 798
VpaK11BI	GGWCC	1 cut(s)	479
XapI	RAATTY	1 cut(s)	576
XceI	RCATGY	1 cut(s)	284
XmiI	GTMKAC	1 cut(s)	390
XmnI	GAANNNNTTC	1 cut(s)	566
XspI	CTAG	1 cut(s)	113
ZraI	GACGTC	1 cut(s)	388

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.