MD08G1187000.v1.1

Annexin D5-like

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr08
Physical Location & Seq
Reverse (-)
23550524 .. 23551490
967 bp
Loading structure...
UTR
Exon/CDS
Intron
MD08G1187000.v1.1.491

Sequence Viewer

Length: 954 bp
ATGGCCTCTGTGACCATACCGCCGGTGCTTACATCCCCCAGAGACGACGCAATCAGCCTCCACCGCGCCTTCAAAGGGTTCGGCTGCGACACATCCGCCGTCATCAACATCCTCGCCCACCGCGACGCCACCCAGCGAGCCTACCTCCAACAGGAGTACAAAACCATGTACCACGATGACCTCACCAAGCGCCTCTCCTCCGAGCTCAGCGGCAACACCAAGAAGGCCGTACTCCTCTGGATGCACGACCCCCCAACCCGCGACGCCACCATCATCCGCCAGGCTCTGGCCGCAGAAGGCATCGTGGACCTCAGAGCCGCCACCGAAGTCATCTGCTCAAGAACCCCATCTCAGATCCTCCACTTCAAGAACCTCTACTTCTCCACATTTGGGGTTTACCTCGAGCAGGACATCGAGTTCCACGCCACCGGAGACCACAAAAAACTCCTCCTTGCTTACGTGGCAACGCCGCGGTACGAGGGTTTGGAGGTGGACAGGGCTGCGGCGGAGCATGATGCTAAGGCTCTCTTCCGGGCCGGGGAGAAGAAACTGGGGACTGATGAGAAGGTGTTTGTGCAGATTTTCAGCGGGCGGAGCAGCGCTCACTTGGCCGCCGTGAGCGCCGCATACCACAACATGTACGGTGGCTCGTTGAAGAAGGCTGTGAAGAAGGAGACTTCTGGGAACTTTGAGCACGCACTTTTGACCATTCTGCAGTGCGCCGAGCATCCCGGGAGGTACTTTGCGAAGGTTTTGCACGGGGCGATGAAGGGTTTGGGGACCGATGACAGTACTCTGCTGAGGGTGATCGTTTCGAGGGCGGAAATCGATATGCAGTTTATAAAGGCGGAGTATATGAAGAAGTACGGGAAGACGTTGAACGATGCTGTGCATTCGGAGACTTCTGGGAATTACAGGGCGTTTCTGCTGGCGCTTTTAGGCCCCAATCATTAG

Protein Analysis

318

Amino Acids

35.14

Weight (kDa)

8.77

Isoelectric Point (pI)

28.84

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Annexin PF00191 16 - 79 2e-16 Annexin
Annexin PF00191 87 - 152 2.4e-07 Annexin
Annexin PF00191 171 - 237 5.7e-20 Annexin
Annexin PF00191 247 - 312 1e-22 Annexin
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 842
AccB7I CCANNNNNTGG 1 cut(s) 286
AccII CGCG 4 cut(s) 66, 123, 261, 472
AclWI GGATC 1 cut(s) 349
AcoI YGGCCR 2 cut(s) 288, 609
AcyI GRCGYC 2 cut(s) 126, 264
AfaI GTAC 8 cut(s) 158, 170, 231, 476, 641, 740, 793, 866
AfeI AGCGCT 1 cut(s) 601
AfiI CCNNNNNNNGG 6 cut(s) 75, 151, 286, 390, 406, 538
AflIII ACRYGT 1 cut(s) 636
AgsI TTSAA 4 cut(s) 73, 367, 655, 880
AjnI CCWGG 1 cut(s) 279
AloI GAACNNNNNNTCC 2 cut(s) 401, 433
AluBI AGCT 1 cut(s) 205
AluI AGCT 1 cut(s) 205
Alw21I GWGCWC 2 cut(s) 207, 696
Alw26I GTCTC 4 cut(s) 36, 426, 668, 893
AlwI GGATC 1 cut(s) 349
AlwNI CAGNNNCTG 1 cut(s) 286
Ama87I CYCGRG 2 cut(s) 401, 731
Aor51HI AGCGCT 1 cut(s) 601
AoxI GGCC 6 cut(s) 3, 225, 288, 534, 609, 940
ApeKI GCWGC 3 cut(s) 84, 500, 597
AspLEI GCGC 6 cut(s) 68, 192, 602, 623, 722, 934
AspS9I GGNCC 4 cut(s) 307, 534, 780, 941
AsuC2I CCSGG 4 cut(s) 533, 538, 732, 733
AsuHPI GGTGA 2 cut(s) 175, 817
AvaI CYCGRG 2 cut(s) 401, 731
AvaII GGWCC 2 cut(s) 307, 780
BaeI ACNNNNGTAYC 2 cut(s) 466, 499
BanII GRGCYC 1 cut(s) 207
BbsI GAAGAC 1 cut(s) 878
Bbv12I GWGCWC 2 cut(s) 207, 696
BbvCI CCTCAGC 1 cut(s) 800
BbvI GCAGC 3 cut(s) 71, 487, 609
BccI CCATC 2 cut(s) 278, 355
BceAI ACGGC 3 cut(s) 83, 212, 599
BcgI CGANNNNNNTGC 2 cut(s) 736, 770
BciT130I CCWGG 1 cut(s) 281
BcnI CCSGG 4 cut(s) 533, 538, 732, 733
BcoDI GTCTC 4 cut(s) 36, 426, 668, 893
BfmI CTRYAG 1 cut(s) 713
BfoI RGCGCY 4 cut(s) 193, 603, 624, 935
BlpI GCTNAGC 1 cut(s) 206
BmcAI AGTACT 1 cut(s) 793
Bme1390I CCNGG 5 cut(s) 281, 533, 538, 732, 733
Bme18I GGWCC 2 cut(s) 307, 780
BmeT110I CYCGRG 2 cut(s) 401, 731
BmgT120I GGNCC 4 cut(s) 307, 534, 780, 941
BmiI GGNNCC 2 cut(s) 781, 943
BmrFI CCNGG 5 cut(s) 281, 533, 538, 732, 733
BmrI ACTGGG 1 cut(s) 560
BmsI GCATC 5 cut(s) 231, 309, 505, 736, 874
BmuI ACTGGG 1 cut(s) 560
BpiI GAAGAC 1 cut(s) 878
BplI GAGNNNNNCTC 4 cut(s) 129, 161, 586, 618
Bpu10I CCTNAGC 2 cut(s) 519, 800
Bpu1102I GCTNAGC 1 cut(s) 206
BpuEI CTTGAG 1 cut(s) 322
BpuMI CCSGG 4 cut(s) 533, 538, 732, 733
Bsa29I ATCGAT 1 cut(s) 828
BsaAI YACGTR 1 cut(s) 460
BsaHI GRCGYC 2 cut(s) 126, 264
BsaI GGTCTC 1 cut(s) 426
BsaJI CCNNGG 3 cut(s) 470, 537, 731
BsaWI WCCGGW 1 cut(s) 428
Bsc4I CCNNNNNNNGG 6 cut(s) 75, 151, 286, 390, 406, 538
Bse118I RCCGGY 1 cut(s) 22
Bse1I ACTGG 1 cut(s) 555
BseBI CCWGG 1 cut(s) 281
BseCI ATCGAT 1 cut(s) 828
BseDI CCNNGG 3 cut(s) 470, 537, 731
BseGI GGATG 6 cut(s) 32, 92, 108, 246, 273, 727
BseLI CCNNNNNNNGG 6 cut(s) 75, 151, 286, 390, 406, 538
BseMII CTCAG 4 cut(s) 220, 325, 365, 791
BseNI ACTGG 1 cut(s) 555
BseRI GAGGAG 3 cut(s) 187, 224, 437
BseXI GCAGC 3 cut(s) 71, 487, 609
BseYI CCCAGC 1 cut(s) 132
BsgI GTGCAG 1 cut(s) 596
Bsh1236I CGCG 4 cut(s) 66, 123, 261, 472
BshFI GGCC 6 cut(s) 5, 227, 290, 536, 611, 942
BshVI ATCGAT 1 cut(s) 828
BsiHKAI GWGCWC 2 cut(s) 207, 696
BsiHKCI CYCGRG 2 cut(s) 401, 731
BsiSI CCGG 5 cut(s) 23, 429, 532, 537, 732
BslFI GGGAC 2 cut(s) 568, 793
BslI CCNNNNNNNGG 6 cut(s) 75, 151, 286, 390, 406, 538
BsmAI GTCTC 4 cut(s) 36, 426, 668, 893
BsmBI CGTCTC 1 cut(s) 36
BsmFI GGGAC 2 cut(s) 568, 793
BsmI GAATGC 1 cut(s) 892
BsnI GGCC 6 cut(s) 5, 227, 290, 536, 611, 942
Bso31I GGTCTC 1 cut(s) 426
BsoBI CYCGRG 2 cut(s) 401, 731
Bsp1286I GDGCHC 2 cut(s) 207, 696
Bsp143I GATC 2 cut(s) 354, 807
Bsp1720I GCTNAGC 1 cut(s) 206
BspANI GGCC 6 cut(s) 5, 227, 290, 536, 611, 942
BspCNI CTCAG 4 cut(s) 219, 324, 364, 792
BspDI ATCGAT 1 cut(s) 828
BspFNI CGCG 4 cut(s) 66, 123, 261, 472
BspLI GGNNCC 2 cut(s) 781, 943
BspMAI CTGCAG 1 cut(s) 717
BspPI GGATC 1 cut(s) 349
BspTNI GGTCTC 1 cut(s) 426
BsrFI RCCGGY 1 cut(s) 22
BsrI ACTGG 1 cut(s) 555
BssAI RCCGGY 1 cut(s) 22
BssECI CCNNGG 3 cut(s) 470, 537, 731
BssMI GATC 2 cut(s) 354, 807
BssNI GRCGYC 2 cut(s) 126, 264
Bst2UI CCWGG 1 cut(s) 281
Bst4CI ACNGT 2 cut(s) 644, 791
Bst6I CTCTTC 1 cut(s) 533
BstACI GRCGYC 2 cut(s) 126, 264
BstBAI YACGTR 1 cut(s) 460
BstC8I GCNNGC 4 cut(s) 138, 590, 696, 930
BstDEI CTNAG 5 cut(s) 206, 311, 351, 519, 800
BstDSI CCRYGG 1 cut(s) 470
BstENI CCTNNNNNAGG 2 cut(s) 149, 404
BstF5I GGATG 6 cut(s) 32, 92, 108, 246, 273, 727
BstFNI CGCG 4 cut(s) 66, 123, 261, 472
BstH2I RGCGCY 4 cut(s) 193, 603, 624, 935
BstHHI GCGC 6 cut(s) 68, 192, 602, 623, 722, 934
BstKTI GATC 2 cut(s) 357, 810
BstMAI GTCTC 4 cut(s) 36, 426, 668, 893
BstMBI GATC 2 cut(s) 354, 807
BstMWI GCNNNNNNNGC 6 cut(s) 63, 290, 461, 594, 608, 620
BstNI CCWGG 1 cut(s) 281
BstNSI RCATGY 1 cut(s) 640
BstSCI CCNGG 5 cut(s) 279, 531, 536, 730, 731
BstSFI CTRYAG 1 cut(s) 713
BstUI CGCG 4 cut(s) 66, 123, 261, 472
BstV1I GCAGC 3 cut(s) 71, 487, 609
BstV2I GAAGAC 1 cut(s) 878
BstX2I RGATCY 1 cut(s) 354
BstYI RGATCY 1 cut(s) 354
Bsu15I ATCGAT 1 cut(s) 828
BsuRI GGCC 6 cut(s) 5, 227, 290, 536, 611, 942
BsuTUI ATCGAT 1 cut(s) 828
BtgI CCRYGG 1 cut(s) 470
BtgZI GCGATG 1 cut(s) 779
BtsCI GGATG 6 cut(s) 32, 92, 108, 246, 273, 727
BtsI GCAGTG 1 cut(s) 722
BtsIMutI CAGTG 1 cut(s) 722
Cac8I GCNNGC 4 cut(s) 138, 590, 696, 930
CaiI CAGNNNCTG 1 cut(s) 286
CfoI GCGC 6 cut(s) 68, 192, 602, 623, 722, 934
Cfr10I RCCGGY 1 cut(s) 22
Cfr13I GGNCC 4 cut(s) 307, 534, 780, 941
Cfr42I CCGCGG 1 cut(s) 473
Cfr9I CCCGGG 1 cut(s) 731
ClaI ATCGAT 1 cut(s) 828
CseI GACGC 3 cut(s) 56, 134, 272
Csp6I GTAC 8 cut(s) 157, 169, 230, 475, 640, 739, 792, 865
CviAII CATG 3 cut(s) 166, 512, 637
CviQI GTAC 8 cut(s) 157, 169, 230, 475, 640, 739, 792, 865
DdeI CTNAG 5 cut(s) 206, 311, 351, 519, 800
DpnI GATC 2 cut(s) 356, 809
DpnII GATC 2 cut(s) 354, 807
EaeI YGGCCR 2 cut(s) 288, 609
Eam1104I CTCTTC 1 cut(s) 533
EarI CTCTTC 1 cut(s) 533
EciI GGCGGA 6 cut(s) 85, 266, 521, 607, 836, 863
Ecl136II GAGCTC 1 cut(s) 205
Eco24I GRGCYC 1 cut(s) 207
Eco31I GGTCTC 1 cut(s) 426
Eco47I GGWCC 2 cut(s) 307, 780
Eco47III AGCGCT 1 cut(s) 601
Eco53kI GAGCTC 1 cut(s) 205
Eco88I CYCGRG 2 cut(s) 401, 731
EcoICRI GAGCTC 1 cut(s) 205
EcoNI CCTNNNNNAGG 2 cut(s) 149, 404
EcoO109I RGGNCCY 1 cut(s) 941
EcoRII CCWGG 1 cut(s) 279
EcoT38I GRGCYC 1 cut(s) 207
Esp3I CGTCTC 1 cut(s) 36
FaeI CATG 3 cut(s) 169, 515, 640
FaiI YATR 9 cut(s) 17, 167, 513, 628, 638, 833, 842, 855, 857
FalI AAGNNNNNCTT 2 cut(s) 512, 544
FaqI GGGAC 2 cut(s) 568, 793
FatI CATG 3 cut(s) 165, 511, 636
FauI CCCGC 2 cut(s) 266, 581
FokI GGATG 6 cut(s) 19, 79, 95, 253, 260, 714
FriOI GRGCYC 1 cut(s) 207
GlaI GCGC 6 cut(s) 67, 191, 601, 622, 721, 933
GsaI CCCAGC 1 cut(s) 136
HaeII RGCGCY 4 cut(s) 193, 603, 624, 935
HaeIII GGCC 6 cut(s) 5, 227, 290, 536, 611, 942
HapII CCGG 5 cut(s) 23, 429, 532, 537, 732
HgaI GACGC 3 cut(s) 56, 134, 272
HhaI GCGC 6 cut(s) 68, 192, 602, 623, 722, 934
Hin1I GRCGYC 2 cut(s) 126, 264
Hin1II CATG 3 cut(s) 169, 515, 640
Hin6I GCGC 6 cut(s) 66, 190, 600, 621, 720, 932
HinP1I GCGC 6 cut(s) 66, 190, 600, 621, 720, 932
HpaII CCGG 5 cut(s) 23, 429, 532, 537, 732
HphI GGTGA 2 cut(s) 175, 817
Hpy166II GTNNAC 3 cut(s) 307, 397, 493
Hpy188I TCNGA 4 cut(s) 202, 314, 354, 898
Hpy188III TCNNGA 3 cut(s) 238, 339, 367
Hpy8I GTNNAC 3 cut(s) 307, 397, 493
Hpy99I CGWCG 3 cut(s) 50, 128, 266
HpyAV CCTTC 8 cut(s) 79, 217, 290, 559, 652, 664, 742, 763
HpyCH4III ACNGT 2 cut(s) 644, 791
HpyCH4IV ACGT 2 cut(s) 459, 875
HpyCH4V TGCA 6 cut(s) 244, 577, 715, 757, 835, 892
HpyF10VI GCNNNNNNNGC 6 cut(s) 63, 290, 461, 594, 608, 620
HpyF3I CTNAG 5 cut(s) 206, 311, 351, 519, 800
HpySE526I ACGT 2 cut(s) 459, 875
Hsp92I GRCGYC 2 cut(s) 126, 264
Hsp92II CATG 3 cut(s) 169, 515, 640
HspAI GCGC 6 cut(s) 66, 190, 600, 621, 720, 932
KspI CCGCGG 1 cut(s) 473
Kzo9I GATC 2 cut(s) 354, 807
LmnI GCTCC 2 cut(s) 508, 594
Lsp1109I GCAGC 3 cut(s) 71, 487, 609
LweI GCATC 5 cut(s) 231, 309, 505, 736, 874
MaeII ACGT 2 cut(s) 459, 875
MaeIII GTNAC 1 cut(s) 10
MalI GATC 2 cut(s) 356, 809
MboI GATC 2 cut(s) 354, 807
MboII GAAGA 6 cut(s) 520, 556, 667, 679, 871, 883
MflI RGATCY 1 cut(s) 354
MhlI GDGCHC 2 cut(s) 207, 696
MluCI AATT 1 cut(s) 910
MmeI TCCRAC 1 cut(s) 172
MspA1I CMGCKG 3 cut(s) 210, 472, 588
MspI CCGG 5 cut(s) 23, 429, 532, 537, 732
MspR9I CCNGG 5 cut(s) 281, 533, 538, 732, 733
Mva1269I GAATGC 1 cut(s) 892
MvaI CCWGG 1 cut(s) 281
MvnI CGCG 4 cut(s) 66, 123, 261, 472
MwoI GCNNNNNNNGC 6 cut(s) 63, 290, 461, 594, 608, 620
NciI CCSGG 4 cut(s) 533, 538, 732, 733
NdeII GATC 2 cut(s) 354, 807
NlaIII CATG 3 cut(s) 169, 515, 640
NlaIV GGNNCC 2 cut(s) 781, 943
NmeAIII GCCGAG 1 cut(s) 748
NmuCI GTSAC 1 cut(s) 10
NspI RCATGY 1 cut(s) 640
PaeR7I CTCGAG 1 cut(s) 401
PciI ACATGT 1 cut(s) 636
PcsI WCGNNNNNNNCGW 1 cut(s) 120
PctI GAATGC 1 cut(s) 892
PflMI CCANNNNNTGG 1 cut(s) 286
Ppu21I YACGTR 1 cut(s) 460
PscI ACATGT 1 cut(s) 636
PsiI TTATAA 1 cut(s) 842
Psp124BI GAGCTC 1 cut(s) 207
Psp6I CCWGG 1 cut(s) 279
PspFI CCCAGC 1 cut(s) 132
PspGI CCWGG 1 cut(s) 279
PspN4I GGNNCC 2 cut(s) 781, 943
PspPI GGNCC 4 cut(s) 307, 534, 780, 941
PspXI VCTCGAGB 1 cut(s) 401
PstI CTGCAG 1 cut(s) 717
PstNI CAGNNNCTG 1 cut(s) 286
PsuI RGATCY 1 cut(s) 354
RsaI GTAC 8 cut(s) 158, 170, 231, 476, 641, 740, 793, 866
RsaNI GTAC 8 cut(s) 157, 169, 230, 475, 640, 739, 792, 865
SacI GAGCTC 1 cut(s) 207
SacII CCGCGG 1 cut(s) 473
Sau3AI GATC 2 cut(s) 354, 807
Sau96I GGNCC 4 cut(s) 307, 534, 780, 941
ScaI AGTACT 1 cut(s) 793
ScrFI CCNGG 5 cut(s) 281, 533, 538, 732, 733
SduI GDGCHC 2 cut(s) 207, 696
SfaNI GCATC 5 cut(s) 231, 309, 505, 736, 874
SfcI CTRYAG 1 cut(s) 713
Sfr274I CTCGAG 1 cut(s) 401
Sfr303I CCGCGG 1 cut(s) 473
SgrAI CRCCGGYG 1 cut(s) 22
SgrBI CCGCGG 1 cut(s) 473
SinI GGWCC 2 cut(s) 307, 780
SlaI CTCGAG 1 cut(s) 401
SmaI CCCGGG 1 cut(s) 733
SmlI CTYRAG 2 cut(s) 337, 401
SmoI CTYRAG 2 cut(s) 337, 401
Sse9I AATT 1 cut(s) 910
SstI GAGCTC 1 cut(s) 207
StyD4I CCNGG 5 cut(s) 279, 531, 536, 730, 731
TaaI ACNGT 2 cut(s) 644, 791
TaiI ACGT 2 cut(s) 462, 878
TaqI TCGA 4 cut(s) 402, 414, 815, 828
TaqII GACCGA 1 cut(s) 797
TasI AATT 1 cut(s) 910
TatI WGTACW 2 cut(s) 156, 791
TauI GCSGC 7 cut(s) 213, 293, 320, 472, 506, 614, 626
TscAI CASTG 1 cut(s) 722
TseFI GTSAC 1 cut(s) 10
TseI GCWGC 3 cut(s) 84, 500, 597
Tsp45I GTSAC 1 cut(s) 10
TspDTI ATGAA 2 cut(s) 782, 872
TspMI CCCGGG 1 cut(s) 731
TspRI CASTG 1 cut(s) 722
Van91I CCANNNNNTGG 1 cut(s) 286
VpaK11BI GGWCC 2 cut(s) 307, 780
XagI CCTNNNNNAGG 2 cut(s) 149, 404
XceI RCATGY 1 cut(s) 640
XhoI CTCGAG 1 cut(s) 401
XmaI CCCGGG 1 cut(s) 731
ZrmI AGTACT 1 cut(s) 793
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.