Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb6

Orthogroup ID

OG0003132

Physical Location & Seq

Genomic Coordinates Forward (+)

6632092 .. 6635843

Gene Structure 3752 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_6g11090.t2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2274 bp

ATGGACATGGACGTTGATGAACCAACCAAAGTCGACCAAGAAACGCAAGCAAAGCCCATAATCGTGATCTTGATGGGCGCACCCGGTAGCGGCAAGTCCACATTCTGCGAACAAGTCATGGGCTCCTCAATTCGTCCCTGGGTTCGAATCTGCCAGGATACTATCAAAAATGGGAAAGCCGGGACGAAAGCGCAGTGTATTGAGAGTGCGAGGAGCGCATTGAGGGAAGGGAAGAGTGTGTTTATAGATAGATGTAATCTGGAGAAAGAGCAAAGAGATGAGTTTGCGAAGCTGGGTGGTAGTGGGCAAGTGGATGTTCATGCTGTCGTGCTTGATCTTCCTGCTAAGGTGTGTATATCGCGGTCGGTGAAGCGAACTGGGCATGAGGGGAACTTGCAAGGCGGGAAAGCTGCGGCGGTTGTGAATAGAATGTTGCAGAAGAAAGAGTTTCCGAAGTTAAGTGAAGGGTATGGTAGGATCACTTTTTGCCAGAATGAGAGTGATGTTGAGTCTGCTGTTCGTACGTATACTGGACTCGGTCCGTTGGATACACTTCCCCATGGGACTTTTGGCCAGAAGAACCCGGGTGCTAAAGTTCAACTTGGTATAATGAAGTTCTTGAAGAAAACAGAGAATCCTGCTAATACTGAATCAACTTCGAAGAAGGTTCAGGGTTCTGATGCTTCTCAAATTACCGGGGAACAGAATACAAGTTTGAAAGGAACAGGTTTGTCAGCTGAAAGTGATAGCATGGAGTCCAAGAAAGATGAGCAGCTTGTCGTAGGTTCTTCTGGCACTGACGTCTCTCTTGATGATGCTCCCACCCTGGCATTTCCATCTATTTCCACAGCAGATTTTCAGTTTGACCTTGAGATGGCATCTGACATTATTGTAGAGAAAGTTGCAGAATTCGTTAATAAACTTGGAAATGCTAGACTTGTTTTAGTGGACTTGACTCATAAATCGAAGATTTTGTCTTTGGTGAGGGCTAAAGCTTCACAGAAAAACATCGACTCCAACAGGTTCTTCACATTTGTAGGAGATATCACTAAGCTTCATACAGAAGGAGGTCTTCGCTGCAATGTGATAGCTAATGCCGCTAACTGGCGGCTTAAACCGGGAGGTGGTGGTGTCAATGCTGCAATCTTCAATGCTGGAGGTCCAGCCTTAGAGGTTGCAACCAAAGAACAAGCCAAATCTCTGTACCCTGGGAATGCTGTTGTTGTTCCTCTCCCTTCAACTTCTCCCCTGTTTTGTAGGGAAGGAGTAACCCATGTCATACATGTTCTTGGACCCAATATGAACCCACAGAGGCCAAATTATCTTGACAATGACTATAATAAAGGCCGCAAAGTTCTACAAGACACTTATAATTCACTTTTCGAATGTTTTGCATCAGTGGTAAGAACCCAAAAGAAGGTATCCAAAGGAAGCATTGAAAACCTTCAGTTGAAGCTGTCAGAGTTAGAAGATCACTCTGAGAGCGGGCCTACAAATCACTCTACAAACAGCTATCAAAAGATCAAGAGAGAGGATCTTCATGAATCTGAAAGGAACAAACGGAGTAAAGGATATCAAGCTGAAGCTGAAAATGTCTCTGACACCAATACTGGTAAACCAAACCTCAAGTCTGATGGAAGCAAGAATAAGTCCTGGGGATCATGGGCTCAGGCTATTTACAACATTGCCATGCATCCAGATAAGCAGAGGGATGTAGTACTGGAGATATCAGATGATGTCGTTGTACTAAATGATCTTTATCCAAAGGCACAAAAGCATCTCCTGGTGGTGGCGCGACATCCTGGTCTTGATCGCTTGGCAGATGTATGCAAAGAACACATTCAGTTGCTAAGGACAATGCATGCGGTTGGTTTGAAGTGGGCTGAAAAGTTCTTGCAGGATGATTCAACATTAGTCTTTCGTCTTGGATACCACTCGGAACCATCAATGAGACAGCTACACCTACATGTAATCAGCCAGGATTTTAATTCAGCACATTTGAAGAACAAGAAACATTGGAACTCTTTTAATACTGCTTTCTTTCGAGACTCTGTGGATGTGATAGAGGAAGTCAGTAGTGATGGAAAGGCGATACTGAATGATGATGAGAGCCTGATGTCTGTGGAGTTACGATGTAACCGATGTAGAAGTGCTCACCCCACCATACCCAAACTAAAACTGCACATTGGCAGATGTCAAGCTTCCTTCCCAAACACCCTGCTCCAAAATGGTCGTCTAGTAACCGCACCAAGCAATTCTAGCACTGATCCATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0006139 GO:0006163 GO:0006725 GO:0006753 GO:0006790 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009117 GO:0009150 GO:0009259 GO:0009987 GO:0016787 GO:0016817 GO:0016819 GO:0019637 GO:0019693 GO:0034641 GO:0044237 GO:0044238 GO:0044281 GO:0046483 GO:0047627 GO:0055086 GO:0071704 GO:0072521 GO:1901135 GO:1901360 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AAA_33 DcpS_C HLH Macro zf-C2HE

Protein Analysis

758

Amino Acids

83.11

Weight (kDa)

8.48

Isoelectric Point (pI)

33.43

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Macro	PF01661	222 - 303	6.4e-07	Macro domain
DcpS_C	PF11969	416 - 529	7.1e-25	Scavenger mRNA decapping enzyme C-term binding
HIT	PF01230	429 - 518	3.1e-09	HIT domain
zf-C2HE	PF16278	534 - 586	2.1e-08	C2HE / C2H2 / C2HC zinc-binding finger

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003132)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G01310
fragaria_vesca	FvH4_6g11090 FvH4_6g11090 FvH4_6g11090 FvH4_6g11090 FvH4_6g11090
malus_domestica	MD04G1160300.v1.1 MD05G1095500.v1.1 MD10G1110900.v1.1 MD12G1172800.v1.1
prunus_persica	Prupe.6G280900_v2.0.a1 Prupe.6G280900_v2.0.a1 Prupe.6G280900_v2.0.a1 Prupe.6G280900_v2.0.a1 Prupe.6G280900_v2.0.a1
pyrus_communis	pycom04g14360 pycom12g16400 pycom12g16440
rosa_chinensis	RchiOBHm_Chr3g0462501 RchiOBHm_Chr3g0462521
rosa_laevigata	RLG00000024853 RLG00000024857
rosa_multiflora	Rmu_sc0003624.1_g000009 Rmu_sc0003624.1_g000012 Rmu_sc0003624.1_g000015 Rmu_sc0011346.1_g000002 Rmu_sc0011346.1_g000005
rosa_roxburghii	Rroxscaffold_6G00417460
rosa_rugosa	Rorug03G0057000
rosa_samantha	Rh3AG115200 Rh3BG118500 Rh3BG118600 Rh3CG121400 Rh3CG122000 Rh3DG120700
rosa_wichuraiana	Rw0G003810 Rw3G009750

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1371
AasI	GACNNNNNNGTC	1 cut(s)	1803
AatII	GACGTC	1 cut(s)	804
AccBSI	CCGCTC	1 cut(s)	1485
AccI	GTMKAC	2 cut(s)	33, 527
AccII	CGCG	2 cut(s)	361, 1795
AclWI	GGATC	4 cut(s)	485, 1542, 1666, 2261
AcoI	YGGCCR	1 cut(s)	571
AcsI	RAATTY	1 cut(s)	908
AcuI	CTGAAG	2 cut(s)	1430, 1602
AcyI	GRCGYC	1 cut(s)	801
AfaI	GTAC	4 cut(s)	523, 1205, 1719, 1746
AfiI	CCNNNNNNNGG	6 cut(s)	89, 874, 1104, 1124, 1417, 1789
AflIII	ACRYGT	2 cut(s)	1282, 1966
AjnI	CCWGG	8 cut(s)	137, 153, 825, 1207, 1652, 1782, 1801, 1977
AjuI	GAANNNNNNNTTGG	2 cut(s)	1010, 1042
Alw21I	GWGCWC	1 cut(s)	2155
Alw26I	GTCTC	4 cut(s)	808, 1600, 1945, 2040
AlwI	GGATC	4 cut(s)	485, 1542, 1666, 2261
Ama87I	CYCGRG	1 cut(s)	583
AoxI	GGCC	4 cut(s)	571, 1313, 1345, 1487
ApeKI	GCWGC	4 cut(s)	410, 772, 1077, 1139
ApoI	RAATTY	1 cut(s)	908
ArsI	GACNNNNNNTTYG	6 cut(s)	959, 991, 1613, 1645, 2218, 2250
Asp700I	GAANNNNTTC	2 cut(s)	1443, 1839
AspLEI	GCGC	4 cut(s)	80, 193, 218, 1795
AspS9I	GGNCC	4 cut(s)	539, 1160, 1292, 1487
AsuC2I	CCSGG	6 cut(s)	84, 181, 584, 585, 697, 1119
AsuHPI	GGTGA	3 cut(s)	379, 994, 2147
AsuII	TTCGAA	3 cut(s)	145, 659, 1383
AvaI	CYCGRG	1 cut(s)	583
AvaII	GGWCC	3 cut(s)	539, 1160, 1292
BalI	TGGCCA	1 cut(s)	573
BanII	GRGCYC	2 cut(s)	125, 1669
BbsI	GAAGAC	1 cut(s)	1064
Bbv12I	GWGCWC	1 cut(s)	2155
BbvI	GCAGC	4 cut(s)	397, 784, 1064, 1126
BccI	CCATC	6 cut(s)	67, 844, 868, 1628, 1951, 2075
BcgI	CGANNNNNNTGC	2 cut(s)	1373, 1407
BciT130I	CCWGG	8 cut(s)	139, 155, 827, 1209, 1654, 1784, 1803, 1979
BciVI	GTATCC	4 cut(s)	151, 541, 1432, 1922
BcnI	CCSGG	6 cut(s)	84, 181, 584, 585, 697, 1119
BcoDI	GTCTC	4 cut(s)	808, 1600, 1945, 2040
BfaI	CTAG	3 cut(s)	933, 2237, 2259
BfuI	GTATCC	4 cut(s)	151, 541, 1432, 1922
BisI	GCNGC	9 cut(s)	91, 411, 414, 773, 1078, 1098, 1109, 1140, 1348
BlsI	GCNGC	9 cut(s)	92, 412, 415, 774, 1079, 1099, 1110, 1141, 1349
BmcAI	AGTACT	1 cut(s)	1719
Bme18I	GGWCC	3 cut(s)	539, 1160, 1292
BmeT110I	CYCGRG	1 cut(s)	583
BmgT120I	GGNCC	4 cut(s)	539, 1160, 1292, 1487
BmiI	GGNNCC	3 cut(s)	124, 1294, 1941
BmrI	ACTGGG	1 cut(s)	387
BmsI	GCATC	6 cut(s)	670, 805, 887, 1403, 1702, 1786
BmuI	ACTGGG	1 cut(s)	387
BpiI	GAAGAC	1 cut(s)	1064
BpmI	CTGGAG	3 cut(s)	281, 1176, 1742
Bpu10I	CCTNAGC	3 cut(s)	345, 1668, 1850
Bpu14I	TTCGAA	3 cut(s)	145, 659, 1383
BpuEI	CTTGAG	2 cut(s)	890, 1610
BpuMI	CCSGG	6 cut(s)	84, 181, 584, 585, 697, 1119
BsaAI	YACGTR	1 cut(s)	525
BsaBI	GATNNNNATC	1 cut(s)	1758
BsaHI	GRCGYC	1 cut(s)	801
BsaJI	CCNNGG	9 cut(s)	137, 138, 559, 583, 696, 825, 1207, 1208, 1653
BsaXI	ACNNNNNCTCC	2 cut(s)	998, 1028
Bsc4I	CCNNNNNNNGG	6 cut(s)	89, 874, 1104, 1124, 1417, 1789
Bse1I	ACTGG	5 cut(s)	382, 535, 1109, 1615, 1725
Bse3DI	GCAATG	2 cut(s)	1087, 1683
Bse8I	GATNNNNATC	1 cut(s)	1758
BseBI	CCWGG	8 cut(s)	139, 155, 827, 1209, 1654, 1784, 1803, 1979
BseDI	CCNNGG	9 cut(s)	137, 138, 559, 583, 696, 825, 1207, 1208, 1653
BseGI	GGATG	6 cut(s)	319, 1693, 1717, 1798, 1906, 2062
BseJI	GATNNNNATC	1 cut(s)	1758
BseLI	CCNNNNNNNGG	6 cut(s)	89, 874, 1104, 1124, 1417, 1789
BseMI	GCAATG	2 cut(s)	1087, 1683
BseMII	CTCAG	2 cut(s)	1470, 1682
BseNI	ACTGG	5 cut(s)	382, 535, 1109, 1615, 1725
BseRI	GAGGAG	2 cut(s)	115, 226
BseXI	GCAGC	4 cut(s)	397, 784, 1064, 1126
BseYI	CCCAGC	1 cut(s)	292
BsgI	GTGCAG	1 cut(s)	2165
Bsh1236I	CGCG	2 cut(s)	361, 1795
Bsh1285I	CGRYCG	1 cut(s)	365
BshFI	GGCC	4 cut(s)	573, 1315, 1347, 1489
BsiEI	CGRYCG	1 cut(s)	365
BsiHKAI	GWGCWC	1 cut(s)	2155
BsiHKCI	CYCGRG	1 cut(s)	583
BsiSI	CCGG	5 cut(s)	84, 180, 584, 696, 1118
BsiWI	CGTACG	1 cut(s)	521
BslFI	GGGAC	3 cut(s)	120, 196, 577
BslI	CCNNNNNNNGG	6 cut(s)	89, 874, 1104, 1124, 1417, 1789
BsmAI	GTCTC	4 cut(s)	808, 1600, 1945, 2040
BsmBI	CGTCTC	1 cut(s)	808
BsmFI	GGGAC	3 cut(s)	120, 196, 577
BsmI	GAATGC	1 cut(s)	1219
BsnI	GGCC	4 cut(s)	573, 1315, 1347, 1489
BsoBI	CYCGRG	1 cut(s)	583
Bsp119I	TTCGAA	3 cut(s)	145, 659, 1383
Bsp1286I	GDGCHC	3 cut(s)	125, 1669, 2155
Bsp19I	CCATGG	1 cut(s)	559
BspANI	GGCC	4 cut(s)	573, 1315, 1347, 1489
BspCNI	CTCAG	2 cut(s)	1471, 1681
BspFNI	CGCG	2 cut(s)	361, 1795
BspHI	TCATGA	1 cut(s)	1540
BspLI	GGNNCC	3 cut(s)	124, 1294, 1941
BspPI	GGATC	4 cut(s)	485, 1542, 1666, 2261
BspT104I	TTCGAA	3 cut(s)	145, 659, 1383
BsrBI	CCGCTC	1 cut(s)	1485
BsrDI	GCAATG	2 cut(s)	1087, 1683
BsrI	ACTGG	5 cut(s)	382, 535, 1109, 1615, 1725
BssECI	CCNNGG	9 cut(s)	137, 138, 559, 583, 696, 825, 1207, 1208, 1653
BssNAI	GTATAC	1 cut(s)	528
BssNI	GRCGYC	1 cut(s)	801
BssT1I	CCWWGG	1 cut(s)	559
Bst1107I	GTATAC	1 cut(s)	528
Bst2UI	CCWGG	8 cut(s)	139, 155, 827, 1209, 1654, 1784, 1803, 1979
Bst6I	CTCTTC	1 cut(s)	227
BstACI	GRCGYC	1 cut(s)	801
BstBAI	YACGTR	1 cut(s)	525
BstBI	TTCGAA	3 cut(s)	145, 659, 1383
BstC8I	GCNNGC	3 cut(s)	48, 1487, 1863
BstDEI	CTNAG	6 cut(s)	345, 1050, 1168, 1479, 1668, 1850
BstDSI	CCRYGG	1 cut(s)	559
BstF5I	GGATG	6 cut(s)	319, 1693, 1717, 1798, 1906, 2062
BstFNI	CGCG	2 cut(s)	361, 1795
BstHHI	GCGC	4 cut(s)	80, 193, 218, 1795
BstMAI	GTCTC	4 cut(s)	808, 1600, 1945, 2040
BstMCI	CGRYCG	1 cut(s)	365
BstMWI	GCNNNNNNNGC	5 cut(s)	52, 215, 379, 1097, 2259
BstNI	CCWGG	8 cut(s)	139, 155, 827, 1209, 1654, 1784, 1803, 1979
BstNSI	RCATGY	3 cut(s)	1286, 1865, 1970
BstSNI	TACGTA	1 cut(s)	525
BstUI	CGCG	2 cut(s)	361, 1795
BstV1I	GCAGC	4 cut(s)	397, 784, 1064, 1126
BstV2I	GAAGAC	1 cut(s)	1064
BstX2I	RGATCY	1 cut(s)	1534
BstYI	RGATCY	1 cut(s)	1534
BstZ17I	GTATAC	1 cut(s)	528
BsuI	GTATCC	4 cut(s)	151, 541, 1432, 1922
BsuRI	GGCC	4 cut(s)	573, 1315, 1347, 1489
BtgI	CCRYGG	1 cut(s)	559
BtsCI	GGATG	6 cut(s)	319, 1693, 1717, 1798, 1906, 2062
BtsI	GCAGTG	1 cut(s)	200
BtsIMutI	CAGTG	4 cut(s)	200, 795, 1404, 2262
Cac8I	GCNNGC	3 cut(s)	48, 1487, 1863
CciI	TCATGA	1 cut(s)	1540
CfoI	GCGC	4 cut(s)	80, 193, 218, 1795
Cfr13I	GGNCC	4 cut(s)	539, 1160, 1292, 1487
Cfr9I	CCCGGG	1 cut(s)	583
CpoI	CGGWCCG	1 cut(s)	539
Csp6I	GTAC	4 cut(s)	522, 1204, 1718, 1745
CspI	CGGWCCG	1 cut(s)	539
CviQI	GTAC	4 cut(s)	522, 1204, 1718, 1745
DdeI	CTNAG	6 cut(s)	345, 1050, 1168, 1479, 1668, 1850
DrdI	GACNNNNNNGTC	1 cut(s)	1803
DseDI	GACNNNNNNGTC	1 cut(s)	1803
EaeI	YGGCCR	1 cut(s)	571
Eam1104I	CTCTTC	1 cut(s)	227
EarI	CTCTTC	1 cut(s)	227
Eco105I	TACGTA	1 cut(s)	525
Eco130I	CCWWGG	1 cut(s)	559
Eco24I	GRGCYC	2 cut(s)	125, 1669
Eco32I	GATATC	3 cut(s)	1045, 1574, 1728
Eco47I	GGWCC	3 cut(s)	539, 1160, 1292
Eco57I	CTGAAG	2 cut(s)	1430, 1602
Eco88I	CYCGRG	1 cut(s)	583
EcoRI	GAATTC	1 cut(s)	908
EcoRII	CCWGG	8 cut(s)	137, 153, 825, 1207, 1652, 1782, 1801, 1977
EcoRV	GATATC	3 cut(s)	1045, 1574, 1728
EcoT14I	CCWWGG	1 cut(s)	559
EcoT22I	ATGCAT	2 cut(s)	1695, 1863
EcoT38I	GRGCYC	2 cut(s)	125, 1669
ErhI	CCWWGG	1 cut(s)	559
Esp3I	CGTCTC	1 cut(s)	808
FalI	AAGNNNNNCTT	4 cut(s)	585, 617, 1056, 1088
FaqI	GGGAC	3 cut(s)	120, 196, 577
FauI	CCCGC	2 cut(s)	395, 1478
FblI	GTMKAC	2 cut(s)	33, 527
Fnu4HI	GCNGC	9 cut(s)	91, 411, 414, 773, 1078, 1098, 1109, 1140, 1348
FokI	GGATG	6 cut(s)	326, 1680, 1724, 1785, 1913, 2069
FriOI	GRGCYC	2 cut(s)	125, 1669
Fsp4HI	GCNGC	9 cut(s)	91, 411, 414, 773, 1078, 1098, 1109, 1140, 1348
FspBI	CTAG	3 cut(s)	933, 2237, 2259
GlaI	GCGC	4 cut(s)	79, 192, 217, 1794
GluI	GCNGC	9 cut(s)	91, 411, 414, 773, 1078, 1098, 1109, 1140, 1348
GsaI	CCCAGC	1 cut(s)	296
GsuI	CTGGAG	3 cut(s)	281, 1176, 1742
HaeIII	GGCC	4 cut(s)	573, 1315, 1347, 1489
HapII	CCGG	5 cut(s)	84, 180, 584, 696, 1118
HhaI	GCGC	4 cut(s)	80, 193, 218, 1795
Hin1I	GRCGYC	1 cut(s)	801
Hin6I	GCGC	4 cut(s)	78, 191, 216, 1793
HinP1I	GCGC	4 cut(s)	78, 191, 216, 1793
HincII	GTYRAC	1 cut(s)	34
HindII	GTYRAC	1 cut(s)	34
HindIII	AAGCTT	3 cut(s)	993, 1052, 2199
HpaII	CCGG	5 cut(s)	84, 180, 584, 696, 1118
HphI	GGTGA	3 cut(s)	379, 994, 2147
Hpy166II	GTNNAC	5 cut(s)	34, 99, 528, 949, 1616
Hpy8I	GTNNAC	5 cut(s)	34, 99, 528, 949, 1616
HpyAV	CCTTC	9 cut(s)	221, 458, 658, 1058, 1245, 1256, 1411, 1454, 2215
HpyCH4IV	ACGT	3 cut(s)	12, 524, 801
HpyF10VI	GCNNNNNNNGC	5 cut(s)	52, 215, 379, 1097, 2259
HpyF3I	CTNAG	6 cut(s)	345, 1050, 1168, 1479, 1668, 1850
HpySE526I	ACGT	3 cut(s)	12, 524, 801
Hsp92I	GRCGYC	1 cut(s)	801
HspAI	GCGC	4 cut(s)	78, 191, 216, 1793
LmnI	GCTCC	4 cut(s)	128, 213, 823, 2226
Lsp1109I	GCAGC	4 cut(s)	397, 784, 1064, 1126
LweI	GCATC	6 cut(s)	670, 805, 887, 1403, 1702, 1786
MaeI	CTAG	3 cut(s)	933, 2237, 2259
MaeII	ACGT	3 cut(s)	12, 524, 801
MaeIII	GTNAC	4 cut(s)	1267, 2127, 2135, 2239
MbiI	CCGCTC	1 cut(s)	1485
MflI	RGATCY	1 cut(s)	1534
MhlI	GDGCHC	3 cut(s)	125, 1669, 2155
MlsI	TGGCCA	1 cut(s)	573
MluCI	AATT	7 cut(s)	129, 690, 908, 1318, 1372, 1987, 2254
MluNI	TGGCCA	1 cut(s)	573
MlyI	GAGTC	6 cut(s)	518, 528, 764, 949, 1007, 2042
MmeI	TCCRAC	2 cut(s)	525, 1041
Mox20I	TGGCCA	1 cut(s)	573
Mph1103I	ATGCAT	2 cut(s)	1695, 1863
MroXI	GAANNNNTTC	2 cut(s)	1443, 1839
MscI	TGGCCA	1 cut(s)	573
MseI	TTAA	5 cut(s)	458, 915, 1113, 1986, 2028
MslI	CAYNNNNRTG	3 cut(s)	62, 1688, 1965
Msp20I	TGGCCA	1 cut(s)	573
MspA1I	CMGCKG	1 cut(s)	737
MspI	CCGG	5 cut(s)	84, 180, 584, 696, 1118
Mva1269I	GAATGC	1 cut(s)	1219
MvaI	CCWGG	8 cut(s)	139, 155, 827, 1209, 1654, 1784, 1803, 1979
MvnI	CGCG	2 cut(s)	361, 1795
MwoI	GCNNNNNNNGC	5 cut(s)	52, 215, 379, 1097, 2259
NciI	CCSGG	6 cut(s)	84, 181, 584, 585, 697, 1119
NcoI	CCATGG	1 cut(s)	559
NlaIV	GGNNCC	3 cut(s)	124, 1294, 1941
NsiI	ATGCAT	2 cut(s)	1695, 1863
NspI	RCATGY	3 cut(s)	1286, 1865, 1970
NspV	TTCGAA	3 cut(s)	145, 659, 1383
PaeI	GCATGC	1 cut(s)	1865
PagI	TCATGA	1 cut(s)	1540
PasI	CCCWGGG	2 cut(s)	138, 1208
PciI	ACATGT	2 cut(s)	1282, 1966
PcsI	WCGNNNNNNNCGW	1 cut(s)	2137
PctI	GAATGC	1 cut(s)	1219
PdmI	GAANNNNTTC	2 cut(s)	1443, 1839
PfeI	GAWTC	5 cut(s)	147, 634, 650, 1544, 1904
Pfl23II	CGTACG	1 cut(s)	521
PflFI	GACNNNGTC	1 cut(s)	537
PkrI	GCNGC	9 cut(s)	92, 412, 415, 774, 1079, 1099, 1110, 1141, 1349
PleI	GAGTC	6 cut(s)	517, 528, 763, 949, 1007, 2042
PpsI	GAGTC	6 cut(s)	517, 528, 763, 949, 1007, 2042
Ppu21I	YACGTR	1 cut(s)	525
PscI	ACATGT	2 cut(s)	1282, 1966
PsiI	TTATAA	1 cut(s)	1371
Psp6I	CCWGG	8 cut(s)	137, 153, 825, 1207, 1652, 1782, 1801, 1977
PspFI	CCCAGC	1 cut(s)	292
PspGI	CCWGG	8 cut(s)	137, 153, 825, 1207, 1652, 1782, 1801, 1977
PspLI	CGTACG	1 cut(s)	521
PspN4I	GGNNCC	3 cut(s)	124, 1294, 1941
PspPI	GGNCC	4 cut(s)	539, 1160, 1292, 1487
PsuI	RGATCY	1 cut(s)	1534
PsyI	GACNNNGTC	1 cut(s)	537
PvuII	CAGCTG	1 cut(s)	737
RsaI	GTAC	4 cut(s)	523, 1205, 1719, 1746
RsaNI	GTAC	4 cut(s)	522, 1204, 1718, 1745
RseI	CAYNNNNRTG	3 cut(s)	62, 1688, 1965
Rsr2I	CGGWCCG	1 cut(s)	539
RsrII	CGGWCCG	1 cut(s)	539
SalI	GTCGAC	1 cut(s)	32
SaqAI	TTAA	5 cut(s)	458, 915, 1113, 1986, 2028
SatI	GCNGC	9 cut(s)	91, 411, 414, 773, 1078, 1098, 1109, 1140, 1348
Sau96I	GGNCC	4 cut(s)	539, 1160, 1292, 1487
ScaI	AGTACT	1 cut(s)	1719
SchI	GAGTC	6 cut(s)	518, 528, 764, 949, 1007, 2042
SduI	GDGCHC	3 cut(s)	125, 1669, 2155
SfaNI	GCATC	6 cut(s)	670, 805, 887, 1403, 1702, 1786
SfuI	TTCGAA	3 cut(s)	145, 659, 1383
SinI	GGWCC	3 cut(s)	539, 1160, 1292
SmaI	CCCGGG	1 cut(s)	585
SmiMI	CAYNNNNRTG	3 cut(s)	62, 1688, 1965
SmlI	CTYRAG	2 cut(s)	869, 1625
SmoI	CTYRAG	2 cut(s)	869, 1625
SnaBI	TACGTA	1 cut(s)	525
SphI	GCATGC	1 cut(s)	1865
Sse9I	AATT	7 cut(s)	129, 690, 908, 1318, 1372, 1987, 2254
SspMI	CTAG	3 cut(s)	933, 2237, 2259
StyI	CCWWGG	1 cut(s)	559
TaiI	ACGT	3 cut(s)	15, 527, 804
TaqI	TCGA	7 cut(s)	33, 145, 659, 965, 1011, 1383, 2044
TaqII	GACCGA	1 cut(s)	527
TasI	AATT	7 cut(s)	129, 690, 908, 1318, 1372, 1987, 2254
TatI	WGTACW	2 cut(s)	1717, 1744
TauI	GCSGC	5 cut(s)	93, 416, 1100, 1111, 1350
TfiI	GAWTC	5 cut(s)	147, 634, 650, 1544, 1904
Tru1I	TTAA	5 cut(s)	458, 915, 1113, 1986, 2028
Tru9I	TTAA	5 cut(s)	458, 915, 1113, 1986, 2028
TscAI	CASTG	4 cut(s)	200, 802, 1404, 2269
TseI	GCWGC	4 cut(s)	410, 772, 1077, 1139
TspDTI	ATGAA	7 cut(s)	33, 308, 626, 1046, 1316, 1529, 1557
TspGWI	ACGGA	2 cut(s)	531, 1576
TspMI	CCCGGG	1 cut(s)	583
TspRI	CASTG	4 cut(s)	200, 802, 1404, 2269
Tth111I	GACNNNGTC	1 cut(s)	537
VpaK11BI	GGWCC	3 cut(s)	539, 1160, 1292
XapI	RAATTY	1 cut(s)	908
XceI	RCATGY	3 cut(s)	1286, 1865, 1970
XcmI	CCANNNNNNNNNTGG	1 cut(s)	566
XmaI	CCCGGG	1 cut(s)	583
XmiI	GTMKAC	2 cut(s)	33, 527
XmnI	GAANNNNTTC	2 cut(s)	1443, 1839
XspI	CTAG	3 cut(s)	933, 2237, 2259
ZraI	GACGTC	1 cut(s)	802
ZrmI	AGTACT	1 cut(s)	1719
Zsp2I	ATGCAT	2 cut(s)	1695, 1863

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.