Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp06

Orthogroup ID

OG0003132

Physical Location & Seq

Genomic Coordinates Reverse (-)

26244736 .. 26248602

Gene Structure 3867 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.6G280900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2403 bp

ATGCACATTTCCCACACATTTCTCAAAAACCATCCACCGGTAAGAGAAGCTTCCGGTAGAAGAAGTGACCGTTGGTTTCAAGCCGTTGATTCGAAGAGTGACAGAGTCTCACTGAAAATGGATATTGACGAAACAGCCAAAGAAATTCCTGTGCTAAAAGGCGAAGAAAAGCATGGAAAGCCAATCGTGGTAATATTGATGGGCGCACCTGGAAGCGGCAAGTCCACCTTCTGTGAACATGTCATGCGCTCCTCTACCCGTCCCTGGGTTCGCGTCTGTCAGGACACTATCAAAAGTGGTAAAGCTGGAACCAAAGCTCAGTGTATAGATAGTGCAATCAATGCATTGAAGGATGGGAAGAGTGTGTTTATAGATAGATGCAATCTAGAGATAGAACAACGCAATGAGTTTGTTAAGCTTGGTGGTCCCCAGGTTGATGTTCATGCTGTGGTGCTTGATCTTCCTGCCAAGCTTTGTATAACGCGGTCTGTGAAGCGAACAGGCCATGAAGGAAACTTGCAAGGTGGGAGAGCTGCTGCGGTTGTGAATAGATTGCTGCAAAAGAAAGAACTGCCTAAACTGAGTGAAGGGTTTGCTAGAATCACTTCTTGCCAGAATGAGAGTGATGTTCAATCTGCCATCGATGCATATAGTGGACTTGGTCCTTTGGATACACTTCCCAATGGTTATTTTGGCCAGAAGAATCCCGGTGCCAAAATTCAACTTGGCATAATGAAGTTCTTAAAGAAAACAGATGCTCCTGCTAGTTCTGAATCAATTTCAAAAAGTATTCCGGATTCTAATGCTTCTCAAATTACTGAAGAGAAGGATGCCTGTTTGAAAGGAACAGGTTCATTATCTGAGAATGCTGGTAGGGAGTTAAAGGAAGGTGAAGAGCCAGTTGTAGGCTCAGCTGGCGGCGATGTTTCTCTTAAGGATGCTCCTACTCTGGCATTTCCCTCTATATCAACAGCAGACTTTCAATTTGACCTCGAGAAGGCATCTGACATTATTGTTGACAAAGTCGCAAAGTTTGTGAATAAGCTTGGAAATGCTAGACTTGTTTTAGTGGACTTGAGTCATAAATCAAAGATTTTGTCTTTGGTAAGGACTAAAGCTTCAGAGAAGAACATTGATTCCAACAAGTTCTTCACATTTGTAGGAGATATCACTCGGCTTCATTCAGAAGGGGGTTTACACTGCAACGTAATAGCTAATGCTGCTAATTGGCGACTCAAACCTGGAGGTGGAGGTGTCAATGCTGCAATCTTCAGTGCTGGAGGTCAAGCTTTGGAGGTTGCAACCAAGGAGCAGGCCAAATCTCTGCTTCCTGGGAATGCTGTGGTTGTGCCTCTCCCTTCAACTTCTCCACTGTTTTGTAGGGAAGGGGTAACCCATGTCATACATGTTGTTGGACCCAACATGAACCCACAGAGACCAAATTGTCTGAACAATGACTACATCAAAGGCTGCAAAGTTCTCCAGGAGGCTTACACTTCACTTTTTGAAGGTTTTGCATCAATTGTAAGGTCCCAATCGAAGTTACCCAAGGGAAGCATTGAAAACCTTCAGTCAAAGATGACAGAGTCACAAGATCACCCTGACGGTATACCTAAAGATCATTTTACTAACAGTGATCAAAAGAATAAGAGAGAGGGTCTTCATAAATCTGAGAGGAGCAAAAGAAGTAAAGGATATCGGGATGAAACTGAAGATGCCTCTGATTCTAATGCTGGTAAAGTAAACCTGAGCAACAAGTCTGATGGAAGCAGGACTAAATCCTGCGGTTCATGGGCTCAGGCTCTCTACAACATTGCTATGCAGCCAGAGAAGCACAGGGATGCTGTACTAGAGATATCCGATGATGTTGTTGTACTGAATGATCTTTATCCAAAGGCACAAAGGCATGTTCTGGTGGTGGCACGATATGAAGGTCTTGATTGCCTGGCAGATGTACGTAAAGAACACCTTCAGTTGTTAAGGACAATGCATGCTCTTGGTTTGAAGTGGGCTGAGAAGTTCTTGCATGATGATTCATCATTGGTCTTTCGGCTTGGATATCACTCGGAACCATCAATGCGACAGCTGCATCTGCATGTTATTAGCCAGGATTTTGATTCAACACATTTGAAGAATAAAAAACATTGGAACTCCTTTAATACTGCTTTCTTTCGAGACTCTGTGGATGTAATGGAGGAAGTCAGTAGTAATGGAAAAGCAATTCTAAAAGATGAGGACAGCATGTTGTCCATGGAGTTGCGATGTCACCGGTGTAGAAGTGCTCACCCCAACATACCCCGATTAAAATCACACGTTACAAACTGTCGAGCCTCTTTTCCAAGCACCCTGCTCCAAAAGGGTCGTCTAGTGCTCACGCCATGCAATGTCAGCATTGATGCGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0006139 GO:0006163 GO:0006725 GO:0006753 GO:0006790 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009117 GO:0009150 GO:0009259 GO:0009987 GO:0016787 GO:0016817 GO:0016819 GO:0019637 GO:0019693 GO:0034641 GO:0044237 GO:0044238 GO:0044281 GO:0046483 GO:0047627 GO:0055086 GO:0071704 GO:0072521 GO:1901135 GO:1901360 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AAA_33 DcpS_C HLH Macro zf-C2HE

Protein Analysis

801

Amino Acids

87.77

Weight (kDa)

8.9

Isoelectric Point (pI)

41.57

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003132)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G01310
fragaria_vesca	FvH4_6g11090 FvH4_6g11090 FvH4_6g11090 FvH4_6g11090 FvH4_6g11090
malus_domestica	MD04G1160300.v1.1 MD05G1095500.v1.1 MD10G1110900.v1.1 MD12G1172800.v1.1
prunus_persica	Prupe.6G280900_v2.0.a1 Prupe.6G280900_v2.0.a1 Prupe.6G280900_v2.0.a1 Prupe.6G280900_v2.0.a1 Prupe.6G280900_v2.0.a1
pyrus_communis	pycom04g14360 pycom12g16400 pycom12g16440
rosa_chinensis	RchiOBHm_Chr3g0462501 RchiOBHm_Chr3g0462521
rosa_laevigata	RLG00000024853 RLG00000024857
rosa_multiflora	Rmu_sc0003624.1_g000009 Rmu_sc0003624.1_g000012 Rmu_sc0003624.1_g000015 Rmu_sc0011346.1_g000002 Rmu_sc0011346.1_g000005
rosa_roxburghii	Rroxscaffold_6G00417460
rosa_rugosa	Rorug03G0057000
rosa_samantha	Rh3AG115200 Rh3BG118500 Rh3BG118600 Rh3CG121400 Rh3CG122000 Rh3DG120700
rosa_wichuraiana	Rw0G003810 Rw3G009750

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1443
AccB1I	GGYRCC	1 cut(s)	710
AccI	GTMKAC	1 cut(s)	1609
AccII	CGCG	2 cut(s)	273, 484
AccIII	TCCGGA	1 cut(s)	793
AciI	CCGC	5 cut(s)	216, 484, 539, 918, 1785
AcoI	YGGCCR	1 cut(s)	694
AcsI	RAATTY	2 cut(s)	144, 717
AcuI	CTGAAG	6 cut(s)	840, 1104, 1255, 1553, 1731, 1955
AfaI	GTAC	3 cut(s)	1848, 1875, 1956
AfiI	CCNNNNNNNGG	7 cut(s)	37, 215, 264, 265, 905, 997, 1247
AflII	CTTAAG	1 cut(s)	932
AflIII	ACRYGT	3 cut(s)	238, 1405, 2311
AgeI	ACCGGT	2 cut(s)	37, 2268
AjnI	CCWGG	8 cut(s)	208, 263, 429, 1240, 1330, 1482, 1944, 2106
AjuI	GAANNNNNNNTTGG	4 cut(s)	55, 87, 1133, 1165
AloI	GAACNNNNNNTCC	2 cut(s)	1121, 1153
Alw21I	GWGCWC	2 cut(s)	2284, 2373
Alw26I	GTCTC	3 cut(s)	112, 1429, 2169
Ama87I	CYCGRG	1 cut(s)	992
Aor13HI	TCCGGA	1 cut(s)	793
AoxI	GGCC	3 cut(s)	502, 694, 1314
ApeKI	GCWGC	8 cut(s)	533, 536, 556, 1220, 1262, 1470, 1822, 2086
ApoI	RAATTY	2 cut(s)	144, 717
ArsI	GACNNNNNNTTYG	6 cut(s)	968, 1000, 1082, 1114, 2347, 2379
AsiGI	ACCGGT	2 cut(s)	37, 2268
Asp700I	GAANNNNTTC	4 cut(s)	604, 850, 1566, 1968
AspLEI	GCGC	2 cut(s)	206, 249
AspS9I	GGNCC	4 cut(s)	425, 662, 1415, 1530
AsuC2I	CCSGG	1 cut(s)	708
AsuHPI	GGTGA	4 cut(s)	902, 1589, 2258, 2276
AsuII	TTCGAA	1 cut(s)	92
AvaI	CYCGRG	1 cut(s)	992
AvaII	GGWCC	4 cut(s)	425, 662, 1415, 1530
BalI	TGGCCA	1 cut(s)	696
BanI	GGYRCC	1 cut(s)	710
BanII	GRGCYC	1 cut(s)	1798
BarI	GAAGNNNNNNTAC	2 cut(s)	1179, 1211
BbsI	GAAGAC	1 cut(s)	1652
Bbv12I	GWGCWC	2 cut(s)	2284, 2373
BbvI	GCAGC	8 cut(s)	520, 523, 543, 1207, 1249, 1457, 1834, 2073
BccI	CCATC	6 cut(s)	39, 193, 347, 647, 1757, 2080
BceAI	ACGGC	1 cut(s)	68
BciT130I	CCWGG	8 cut(s)	210, 265, 431, 1242, 1332, 1484, 1946, 2108
BciVI	GTATCC	1 cut(s)	664
BclI	TGATCA	1 cut(s)	1636
BcnI	CCSGG	1 cut(s)	708
BcoDI	GTCTC	3 cut(s)	112, 1429, 2169
BfaI	CTAG	6 cut(s)	386, 597, 765, 1056, 1850, 2366
BfrI	CTTAAG	1 cut(s)	932
BfuI	GTATCC	1 cut(s)	664
BlpI	GCTNAGC	1 cut(s)	910
Bme1390I	CCNGG	9 cut(s)	210, 265, 431, 708, 1242, 1332, 1484, 1946, 2108
Bme18I	GGWCC	4 cut(s)	425, 662, 1415, 1530
BmeT110I	CYCGRG	1 cut(s)	992
BmgT120I	GGNCC	4 cut(s)	425, 662, 1415, 1530
BmiI	GGNNCC	6 cut(s)	310, 427, 712, 1417, 1532, 2070
BmrFI	CCNGG	9 cut(s)	210, 265, 431, 708, 1242, 1332, 1484, 1946, 2108
BoxI	GACNNNNGTC	1 cut(s)	1077
BpiI	GAAGAC	1 cut(s)	1652
BpmI	CTGGAG	3 cut(s)	1263, 1299, 1466
Bpu10I	CCTNAGC	2 cut(s)	1748, 1797
Bpu1102I	GCTNAGC	1 cut(s)	910
Bpu14I	TTCGAA	1 cut(s)	92
BpuEI	CTTGAG	1 cut(s)	1096
BpuMI	CCSGG	1 cut(s)	708
Bsa29I	ATCGAT	1 cut(s)	642
BsaAI	YACGTR	1 cut(s)	1958
BsaBI	GATNNNNATC	2 cut(s)	1887, 2305
BsaI	GGTCTC	1 cut(s)	1429
BsaJI	CCNNGG	7 cut(s)	263, 264, 429, 1305, 1331, 1548, 2250
BsaWI	WCCGGW	4 cut(s)	37, 53, 793, 2268
BsaXI	ACNNNNNCTCC	2 cut(s)	742, 772
Bsc4I	CCNNNNNNNGG	7 cut(s)	37, 215, 264, 265, 905, 997, 1247
Bse118I	RCCGGY	2 cut(s)	37, 2268
Bse1I	ACTGG	1 cut(s)	899
Bse3DI	GCAATG	3 cut(s)	409, 1812, 2389
Bse8I	GATNNNNATC	2 cut(s)	1887, 2305
BseAI	TCCGGA	1 cut(s)	793
BseBI	CCWGG	8 cut(s)	210, 265, 431, 1242, 1332, 1484, 1946, 2108
BseCI	ATCGAT	1 cut(s)	642
BseDI	CCNNGG	7 cut(s)	263, 264, 429, 1305, 1331, 1548, 2250
BseGI	GGATG	7 cut(s)	31, 358, 835, 943, 1708, 1846, 2191
BseJI	GATNNNNATC	2 cut(s)	1887, 2305
BseLI	CCNNNNNNNGG	7 cut(s)	37, 215, 264, 265, 905, 997, 1247
BseMI	GCAATG	3 cut(s)	409, 1812, 2389
BseMII	CTCAG	8 cut(s)	332, 572, 852, 924, 1662, 1739, 1811, 2004
BseNI	ACTGG	1 cut(s)	899
BseRI	GAGGAG	2 cut(s)	241, 1690
BseXI	GCAGC	8 cut(s)	520, 523, 543, 1207, 1249, 1457, 1834, 2073
Bsh1236I	CGCG	2 cut(s)	273, 484
BshFI	GGCC	3 cut(s)	504, 696, 1316
BshNI	GGYRCC	1 cut(s)	710
BshTI	ACCGGT	2 cut(s)	37, 2268
BshVI	ATCGAT	1 cut(s)	642
BsiHKAI	GWGCWC	2 cut(s)	2284, 2373
BsiHKCI	CYCGRG	1 cut(s)	992
BsiSI	CCGG	5 cut(s)	38, 54, 708, 794, 2269
BslFI	GGGAC	3 cut(s)	246, 411, 1516
BslI	CCNNNNNNNGG	7 cut(s)	37, 215, 264, 265, 905, 997, 1247
BsmAI	GTCTC	3 cut(s)	112, 1429, 2169
BsmFI	GGGAC	3 cut(s)	246, 411, 1516
BsmI	GAATGC	2 cut(s)	871, 1342
BsnI	GGCC	3 cut(s)	504, 696, 1316
Bso31I	GGTCTC	1 cut(s)	1429
BsoBI	CYCGRG	1 cut(s)	992
Bsp119I	TTCGAA	1 cut(s)	92
Bsp1286I	GDGCHC	3 cut(s)	1798, 2284, 2373
Bsp13I	TCCGGA	1 cut(s)	793
Bsp143I	GATC	5 cut(s)	457, 1594, 1618, 1636, 1882
Bsp1720I	GCTNAGC	1 cut(s)	910
Bsp19I	CCATGG	1 cut(s)	2250
BspACI	CCGC	5 cut(s)	216, 484, 539, 918, 1785
BspANI	GGCC	3 cut(s)	504, 696, 1316
BspCNI	CTCAG	8 cut(s)	331, 573, 853, 923, 1663, 1740, 1810, 2005
BspDI	ATCGAT	1 cut(s)	642
BspEI	TCCGGA	1 cut(s)	793
BspFNI	CGCG	2 cut(s)	273, 484
BspLI	GGNNCC	6 cut(s)	310, 427, 712, 1417, 1532, 2070
BspQI	GCTCTTC	1 cut(s)	888
BspT104I	TTCGAA	1 cut(s)	92
BspT107I	GGYRCC	1 cut(s)	710
BspTI	CTTAAG	1 cut(s)	932
BspTNI	GGTCTC	1 cut(s)	1429
BsrDI	GCAATG	3 cut(s)	409, 1812, 2389
BsrFI	RCCGGY	2 cut(s)	37, 2268
BsrI	ACTGG	1 cut(s)	899
BssAI	RCCGGY	2 cut(s)	37, 2268
BssECI	CCNNGG	7 cut(s)	263, 264, 429, 1305, 1331, 1548, 2250
BssMI	GATC	5 cut(s)	457, 1594, 1618, 1636, 1882
BssNAI	GTATAC	1 cut(s)	1610
BssT1I	CCWWGG	3 cut(s)	1305, 1548, 2250
Bst1107I	GTATAC	1 cut(s)	1610
Bst2UI	CCWGG	8 cut(s)	210, 265, 431, 1242, 1332, 1484, 1946, 2108
Bst4CI	ACNGT	5 cut(s)	71, 1374, 1607, 1634, 2324
Bst6I	CTCTTC	4 cut(s)	89, 353, 816, 888
BstAFI	CTTAAG	1 cut(s)	932
BstAPI	GCANNNNNTGC	1 cut(s)	341
BstBAI	YACGTR	1 cut(s)	1958
BstBI	TTCGAA	1 cut(s)	92
BstC8I	GCNNGC	3 cut(s)	916, 1314, 1992
BstDEI	CTNAG	8 cut(s)	318, 581, 861, 910, 1671, 1748, 1797, 2013
BstDSI	CCRYGG	1 cut(s)	2250
BstEII	GGTNACC	1 cut(s)	1390
BstENI	CCTNNNNNAGG	1 cut(s)	995
BstF5I	GGATG	7 cut(s)	31, 358, 835, 943, 1708, 1846, 2191
BstFNI	CGCG	2 cut(s)	273, 484
BstHHI	GCGC	2 cut(s)	206, 249
BstKTI	GATC	5 cut(s)	460, 1597, 1621, 1639, 1885
BstMAI	GTCTC	3 cut(s)	112, 1429, 2169
BstMBI	GATC	5 cut(s)	457, 1594, 1618, 1636, 1882
BstMWI	GCNNNNNNNGC	9 cut(s)	178, 341, 644, 915, 1220, 1831, 2086, 2092, 2388
BstNI	CCWGG	8 cut(s)	210, 265, 431, 1242, 1332, 1484, 1946, 2108
BstNSI	RCATGY	6 cut(s)	242, 1409, 1910, 1994, 2099, 2245
BstPAI	GACNNNNGTC	1 cut(s)	1077
BstPI	GGTNACC	1 cut(s)	1390
BstSCI	CCNGG	9 cut(s)	208, 263, 429, 706, 1240, 1330, 1482, 1944, 2106
BstSNI	TACGTA	1 cut(s)	1958
BstUI	CGCG	2 cut(s)	273, 484
BstV1I	GCAGC	8 cut(s)	520, 523, 543, 1207, 1249, 1457, 1834, 2073
BstV2I	GAAGAC	1 cut(s)	1652
BstZ17I	GTATAC	1 cut(s)	1610
Bsu15I	ATCGAT	1 cut(s)	642
BsuI	GTATCC	1 cut(s)	664
BsuRI	GGCC	3 cut(s)	504, 696, 1316
BsuTUI	ATCGAT	1 cut(s)	642
BtgI	CCRYGG	1 cut(s)	2250
BtgZI	GCGATG	2 cut(s)	936, 2275
BtsCI	GGATG	7 cut(s)	31, 358, 835, 943, 1708, 1846, 2191
BtsI	GCAGTG	1 cut(s)	1198
BtsIMutI	CAGTG	6 cut(s)	110, 326, 1198, 1279, 1370, 1639
Cac8I	GCNNGC	3 cut(s)	916, 1314, 1992
CfoI	GCGC	2 cut(s)	206, 249
Cfr10I	RCCGGY	2 cut(s)	37, 2268
Cfr13I	GGNCC	4 cut(s)	425, 662, 1415, 1530
ClaI	ATCGAT	1 cut(s)	642
CseI	GACGC	1 cut(s)	262
Csp6I	GTAC	3 cut(s)	1847, 1874, 1955
CspAI	ACCGGT	2 cut(s)	37, 2268
CviQI	GTAC	3 cut(s)	1847, 1874, 1955
DdeI	CTNAG	8 cut(s)	318, 581, 861, 910, 1671, 1748, 1797, 2013
DpnI	GATC	5 cut(s)	459, 1596, 1620, 1638, 1884
DpnII	GATC	5 cut(s)	457, 1594, 1618, 1636, 1882
DrdI	GACNNNNNNGTC	1 cut(s)	1443
DseDI	GACNNNNNNGTC	1 cut(s)	1443
EaeI	YGGCCR	1 cut(s)	694
Eam1104I	CTCTTC	4 cut(s)	89, 353, 816, 888
EarI	CTCTTC	4 cut(s)	89, 353, 816, 888
Eco105I	TACGTA	1 cut(s)	1958
Eco130I	CCWWGG	3 cut(s)	1305, 1548, 2250
Eco24I	GRGCYC	1 cut(s)	1798
Eco31I	GGTCTC	1 cut(s)	1429
Eco32I	GATATC	4 cut(s)	1168, 1697, 1857, 2060
Eco47I	GGWCC	4 cut(s)	425, 662, 1415, 1530
Eco57I	CTGAAG	6 cut(s)	840, 1104, 1255, 1553, 1731, 1955
Eco88I	CYCGRG	1 cut(s)	992
Eco91I	GGTNACC	1 cut(s)	1390
EcoNI	CCTNNNNNAGG	1 cut(s)	995
EcoO109I	RGGNCCY	1 cut(s)	1530
EcoO65I	GGTNACC	1 cut(s)	1390
EcoRII	CCWGG	8 cut(s)	208, 263, 429, 1240, 1330, 1482, 1944, 2106
EcoRV	GATATC	4 cut(s)	1168, 1697, 1857, 2060
EcoT14I	CCWWGG	3 cut(s)	1305, 1548, 2250
EcoT22I	ATGCAT	3 cut(s)	346, 649, 1992
EcoT38I	GRGCYC	1 cut(s)	1798
ErhI	CCWWGG	3 cut(s)	1305, 1548, 2250
FalI	AAGNNNNNCTT	6 cut(s)	34, 66, 212, 244, 1953, 1985
FaqI	GGGAC	3 cut(s)	246, 411, 1516
FbaI	TGATCA	1 cut(s)	1636
FblI	GTMKAC	1 cut(s)	1609
FokI	GGATG	7 cut(s)	18, 365, 842, 950, 1715, 1853, 2198
FriOI	GRGCYC	1 cut(s)	1798
FspBI	CTAG	6 cut(s)	386, 597, 765, 1056, 1850, 2366
GlaI	GCGC	2 cut(s)	205, 248
GsuI	CTGGAG	3 cut(s)	1263, 1299, 1466
HaeIII	GGCC	3 cut(s)	504, 696, 1316
HapII	CCGG	5 cut(s)	38, 54, 708, 794, 2269
HgaI	GACGC	1 cut(s)	262
HhaI	GCGC	2 cut(s)	206, 249
Hin6I	GCGC	2 cut(s)	204, 247
HinP1I	GCGC	2 cut(s)	204, 247
HincII	GTYRAC	1 cut(s)	1018
HindII	GTYRAC	1 cut(s)	1018
HindIII	AAGCTT	6 cut(s)	48, 416, 470, 1043, 1116, 1287
HpaII	CCGG	5 cut(s)	38, 54, 708, 794, 2269
HphI	GGTGA	4 cut(s)	902, 1589, 2258, 2276
Hpy166II	GTNNAC	8 cut(s)	225, 236, 656, 1018, 1072, 1196, 1610, 1744
Hpy188III	TCNNGA	7 cut(s)	281, 386, 794, 994, 1700, 1937, 2174
Hpy8I	GTNNAC	8 cut(s)	225, 236, 656, 1018, 1072, 1196, 1610, 1744
HpyCH4III	ACNGT	5 cut(s)	71, 1374, 1607, 1634, 2324
HpyCH4IV	ACGT	3 cut(s)	1206, 1957, 2313
HpyF10VI	GCNNNNNNNGC	9 cut(s)	178, 341, 644, 915, 1220, 1831, 2086, 2092, 2388
HpyF3I	CTNAG	8 cut(s)	318, 581, 861, 910, 1671, 1748, 1797, 2013
HpySE526I	ACGT	3 cut(s)	1206, 1957, 2313
HspAI	GCGC	2 cut(s)	204, 247
Kpn2I	TCCGGA	1 cut(s)	793
Ksp22I	TGATCA	1 cut(s)	1636
Kzo9I	GATC	5 cut(s)	457, 1594, 1618, 1636, 1882
LguI	GCTCTTC	1 cut(s)	888
LmnI	GCTCC	6 cut(s)	254, 763, 946, 1309, 1677, 2355
Lsp1109I	GCAGC	8 cut(s)	520, 523, 543, 1207, 1249, 1457, 1834, 2073
MaeI	CTAG	6 cut(s)	386, 597, 765, 1056, 1850, 2366
MaeII	ACGT	3 cut(s)	1206, 1957, 2313
MaeIII	GTNAC	7 cut(s)	65, 98, 1390, 1542, 1587, 2264, 2314
MalI	GATC	5 cut(s)	459, 1596, 1620, 1638, 1884
MboI	GATC	5 cut(s)	457, 1594, 1618, 1636, 1882
MfeI	CAATTG	1 cut(s)	1521
MhlI	GDGCHC	3 cut(s)	1798, 2284, 2373
MlsI	TGGCCA	1 cut(s)	696
MluCI	AATT	9 cut(s)	144, 717, 777, 813, 983, 1225, 1441, 1521, 2220
MluNI	TGGCCA	1 cut(s)	696
MlyI	GAGTC	5 cut(s)	114, 1087, 1227, 1595, 2171
MmeI	TCCRAC	2 cut(s)	1164, 1393
Mox20I	TGGCCA	1 cut(s)	696
Mph1103I	ATGCAT	3 cut(s)	346, 649, 1992
MroI	TCCGGA	1 cut(s)	793
MroXI	GAANNNNTTC	4 cut(s)	604, 850, 1566, 1968
MscI	TGGCCA	1 cut(s)	696
MseI	TTAA	7 cut(s)	414, 743, 881, 933, 1979, 2157, 2303
MslI	CAYNNNNRTG	3 cut(s)	1817, 1839, 2094
Msp20I	TGGCCA	1 cut(s)	696
MspA1I	CMGCKG	2 cut(s)	914, 2086
MspCI	CTTAAG	1 cut(s)	932
MspI	CCGG	5 cut(s)	38, 54, 708, 794, 2269
MspR9I	CCNGG	9 cut(s)	210, 265, 431, 708, 1242, 1332, 1484, 1946, 2108
MunI	CAATTG	1 cut(s)	1521
Mva1269I	GAATGC	2 cut(s)	871, 1342
MvaI	CCWGG	8 cut(s)	210, 265, 431, 1242, 1332, 1484, 1946, 2108
MvnI	CGCG	2 cut(s)	273, 484
MwoI	GCNNNNNNNGC	9 cut(s)	178, 341, 644, 915, 1220, 1831, 2086, 2092, 2388
NciI	CCSGG	1 cut(s)	708
NcoI	CCATGG	1 cut(s)	2250
NdeII	GATC	5 cut(s)	457, 1594, 1618, 1636, 1882
NlaIV	GGNNCC	6 cut(s)	310, 427, 712, 1417, 1532, 2070
NmeAIII	GCCGAG	1 cut(s)	1153
NmuCI	GTSAC	4 cut(s)	65, 98, 1587, 2264
NsiI	ATGCAT	3 cut(s)	346, 649, 1992
NspI	RCATGY	6 cut(s)	242, 1409, 1910, 1994, 2099, 2245
NspV	TTCGAA	1 cut(s)	92
PaeI	GCATGC	1 cut(s)	1994
PaeR7I	CTCGAG	1 cut(s)	992
PasI	CCCWGGG	1 cut(s)	264
PciI	ACATGT	2 cut(s)	238, 1405
PciSI	GCTCTTC	1 cut(s)	888
PctI	GAATGC	2 cut(s)	871, 1342
PdmI	GAANNNNTTC	4 cut(s)	604, 850, 1566, 1968
PfeI	GAWTC	9 cut(s)	89, 600, 703, 773, 797, 1136, 1724, 2033, 2117
PflFI	GACNNNGTC	4 cut(s)	104, 660, 1022, 1585
PfoI	TCCNGGA	1 cut(s)	1482
PinAI	ACCGGT	2 cut(s)	37, 2268
PleI	GAGTC	5 cut(s)	113, 1086, 1227, 1594, 2171
PpsI	GAGTC	5 cut(s)	113, 1086, 1227, 1594, 2171
Ppu21I	YACGTR	1 cut(s)	1958
PpuMI	RGGWCCY	1 cut(s)	1530
PscI	ACATGT	2 cut(s)	238, 1405
PshAI	GACNNNNGTC	1 cut(s)	1077
Psp5II	RGGWCCY	1 cut(s)	1530
Psp6I	CCWGG	8 cut(s)	208, 263, 429, 1240, 1330, 1482, 1944, 2106
PspEI	GGTNACC	1 cut(s)	1390
PspGI	CCWGG	8 cut(s)	208, 263, 429, 1240, 1330, 1482, 1944, 2106
PspN4I	GGNNCC	6 cut(s)	310, 427, 712, 1417, 1532, 2070
PspPI	GGNCC	4 cut(s)	425, 662, 1415, 1530
PspPPI	RGGWCCY	1 cut(s)	1530
PsrI	GAACNNNNNNTAC	2 cut(s)	1442, 1474
PsyI	GACNNNGTC	4 cut(s)	104, 660, 1022, 1585
PvuII	CAGCTG	2 cut(s)	914, 2086
RsaI	GTAC	3 cut(s)	1848, 1875, 1956
RsaNI	GTAC	3 cut(s)	1847, 1874, 1955
RseI	CAYNNNNRTG	3 cut(s)	1817, 1839, 2094
SapI	GCTCTTC	1 cut(s)	888
SaqAI	TTAA	7 cut(s)	414, 743, 881, 933, 1979, 2157, 2303
Sau3AI	GATC	5 cut(s)	457, 1594, 1618, 1636, 1882
Sau96I	GGNCC	4 cut(s)	425, 662, 1415, 1530
SchI	GAGTC	5 cut(s)	114, 1087, 1227, 1595, 2171
ScrFI	CCNGG	9 cut(s)	210, 265, 431, 708, 1242, 1332, 1484, 1946, 2108
SduI	GDGCHC	3 cut(s)	1798, 2284, 2373
Sfr274I	CTCGAG	1 cut(s)	992
SfuI	TTCGAA	1 cut(s)	92
SgrAI	CRCCGGYG	1 cut(s)	2268
SinI	GGWCC	4 cut(s)	425, 662, 1415, 1530
SlaI	CTCGAG	1 cut(s)	992
SmiMI	CAYNNNNRTG	3 cut(s)	1817, 1839, 2094
SmlI	CTYRAG	3 cut(s)	932, 992, 1075
SmoI	CTYRAG	3 cut(s)	932, 992, 1075
SnaBI	TACGTA	1 cut(s)	1958
SphI	GCATGC	1 cut(s)	1994
Sse9I	AATT	9 cut(s)	144, 717, 777, 813, 983, 1225, 1441, 1521, 2220
SsiI	CCGC	5 cut(s)	216, 484, 539, 918, 1785
SspI	AATATT	1 cut(s)	195
SspMI	CTAG	6 cut(s)	386, 597, 765, 1056, 1850, 2366
StyD4I	CCNGG	9 cut(s)	208, 263, 429, 706, 1240, 1330, 1482, 1944, 2106
StyI	CCWWGG	3 cut(s)	1305, 1548, 2250
TaaI	ACNGT	5 cut(s)	71, 1374, 1607, 1634, 2324
TaiI	ACGT	3 cut(s)	1209, 1960, 2316
TaqI	TCGA	6 cut(s)	92, 642, 993, 1538, 2173, 2326
TasI	AATT	9 cut(s)	144, 717, 777, 813, 983, 1225, 1441, 1521, 2220
TatI	WGTACW	2 cut(s)	1846, 1873
TauI	GCSGC	2 cut(s)	219, 921
TfiI	GAWTC	9 cut(s)	89, 600, 703, 773, 797, 1136, 1724, 2033, 2117
Tru1I	TTAA	7 cut(s)	414, 743, 881, 933, 1979, 2157, 2303
Tru9I	TTAA	7 cut(s)	414, 743, 881, 933, 1979, 2157, 2303
TscAI	CASTG	6 cut(s)	117, 326, 1205, 1279, 1377, 1639
TseFI	GTSAC	4 cut(s)	65, 98, 1587, 2264
TseI	GCWGC	8 cut(s)	533, 536, 556, 1220, 1262, 1470, 1822, 2086
Tsp45I	GTSAC	4 cut(s)	65, 98, 1587, 2264
TspRI	CASTG	6 cut(s)	117, 326, 1205, 1279, 1377, 1639
Tth111I	GACNNNGTC	4 cut(s)	104, 660, 1022, 1585
Vha464I	CTTAAG	1 cut(s)	932
VpaK11BI	GGWCC	4 cut(s)	425, 662, 1415, 1530
XagI	CCTNNNNNAGG	1 cut(s)	995
XapI	RAATTY	2 cut(s)	144, 717
XbaI	TCTAGA	1 cut(s)	385
XceI	RCATGY	6 cut(s)	242, 1409, 1910, 1994, 2099, 2245
XhoI	CTCGAG	1 cut(s)	992
XmiI	GTMKAC	1 cut(s)	1609
XmnI	GAANNNNTTC	4 cut(s)	604, 850, 1566, 1968
XspI	CTAG	6 cut(s)	386, 597, 765, 1056, 1850, 2366
Zsp2I	ATGCAT	3 cut(s)	346, 649, 1992

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.