Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0011346.1

Orthogroup ID

OG0003132

Physical Location & Seq

Genomic Coordinates Reverse (-)

6592 .. 9761

Gene Structure 3170 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0011346.1_g000002.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2265 bp

atggacgttgatgaaccaaccaagggccaagaagaaaagcaaggaaagcccataatcgtagtattgatgggtgcacccggtagcggcaagtccacattctgcgaacaagtcatgggctcctccgttcgtccctgggtccgggtctgccaggatactatcaaaaatgggaaagccggaacgaaagctcagtgtatagagagtgcgaggagtgcattgcgggaaggaaagagtgtgtttatagatagatgcaatctggagaaagagcaaagagatgagtttgtgaagctgggtggtcctcaggtggatgttcatgctgtggtgcttgatcttccttcgaagctttgtatctcacggtcggtgaagcgaactggccatgaggggaacttgcaaggtggaaaagctgcggctgttgtgaatagaatgctgcagaagaaagaattgccgaatctgagcgaagggtttgataggatcactttttgccagaatgagagtgatgttgaatctgccattcgtacatatagtggactcagtccgttggatacacttccccatggtacttttggccagaagagcccgggtgcaaaagttcaacttggtataatgaaattcctaaagaaaacagatgctccgactaatactgaatcgacttcgaacaaggttcaggattctaatgcttctcaaattactgggggaaaggataccagtgtgaaaggaacaggtttgtttactgaaagtggtagtatggagtccaagaaaggtgagcagcctgtcgtaggttctgctggcactgacttctctcttgacaatgctcccaccctggcatttccatctatttccacagcagattttcagtttgaccttgagaaggcatctgacattattgtagagaaagttgcagaatttgtaaataaacttggaaatgcaagacttgttttagtggacttgactcataaatcgaagattttgtccttggtgagggctaaagcttcacagaaaaacattgactccaagaggttcttcacatttgtgggagatatcactaagcttcattcagaaggaggtctttgctgcaatgtgatagctaatgctgctaactggcgacttaaaccaggaggtggtggtgtcaatgctgcaatcttcaatgctggaggtccagctttagaggttgcaaccaaagaacaagccaaatctctgtatcctgggaatgctgtggttgttcctctcccttcaacttctcctttgttttgtagggaaggggtaacccatgtcatacatgttcttggacccaatatgaacccacagagaccaaattatcttgacaatgactatagcaaaggctgcaaaattctccatgacacttatacttcactttttgaaggttttgcatcaatagtgaggacccaaaagaaggtatttaagggaagctttggaaaccttcggttgaagctgccagagtcaaaagatcaccctgagagtgggcctacaaatcactctacaaatacctatcaaaagatcaagagagaggatcttcatgaatctgaaaggaacaaacggagtaaaggagatcaagctgaagctgaaaacgtctctgattctaatgctagtaaatcaaacctccactctgatggaagcaagaataaatcctggggaacatgggcccaggctatctacaacattgccatgcatccagagaagcagagggatgtagtactagagatatcagatgatgtcgttgtactaaatgatctttatccaaaggcacaaatgcatctcctggtggtagcgcgacatcctggtcttgatcgcttggcagatgtatgcaaagaacacattcagttgctaaggacaatgcatgcggttggtttgaagtgggctgaaaagttcttacatgatgattcaacattggtctttcgtcttggatatcactcggaaccatcaatgcgacagctgcacctacatgtaatcagccaggattttaattcagcacatttgaagaacaagaaacattggaattcctttaatactgctttctttcgagactctgtggatgtgctagaggaagtcagtagtgacggaaaggcaatactgaatgatgatgaaagcctgatgtctatggagttacgatgtaatcgatgtagaagtgctcaccccaccattcccaaattgaaattgcacattggcagatgtcgagcctccttcccaagcaccctgcttgaaaatggtcggctggtaactgcaccaagcaattctagcaatgatccatag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0006139 GO:0006163 GO:0006725 GO:0006753 GO:0006790 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009117 GO:0009150 GO:0009259 GO:0009987 GO:0016787 GO:0016817 GO:0016819 GO:0019637 GO:0019693 GO:0034641 GO:0044237 GO:0044238 GO:0044281 GO:0046483 GO:0047627 GO:0055086 GO:0071704 GO:0072521 GO:1901135 GO:1901360 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AAA_33 DcpS_C HLH Macro zf-C2HE

Protein Analysis

754

Amino Acids

82.66

Weight (kDa)

8.76

Isoelectric Point (pI)

35.0

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003132)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G01310
fragaria_vesca	FvH4_6g11090 FvH4_6g11090 FvH4_6g11090 FvH4_6g11090 FvH4_6g11090
malus_domestica	MD04G1160300.v1.1 MD05G1095500.v1.1 MD10G1110900.v1.1 MD12G1172800.v1.1
prunus_persica	Prupe.6G280900_v2.0.a1 Prupe.6G280900_v2.0.a1 Prupe.6G280900_v2.0.a1 Prupe.6G280900_v2.0.a1 Prupe.6G280900_v2.0.a1
pyrus_communis	pycom04g14360 pycom12g16400 pycom12g16440
rosa_chinensis	RchiOBHm_Chr3g0462501 RchiOBHm_Chr3g0462521
rosa_laevigata	RLG00000024853 RLG00000024857
rosa_multiflora	Rmu_sc0003624.1_g000009 Rmu_sc0003624.1_g000012 Rmu_sc0003624.1_g000015 Rmu_sc0011346.1_g000002 Rmu_sc0011346.1_g000005
rosa_roxburghii	Rroxscaffold_6G00417460
rosa_rugosa	Rorug03G0057000
rosa_samantha	Rh3AG115200 Rh3BG118500 Rh3BG118600 Rh3CG121400 Rh3CG122000 Rh3DG120700
rosa_wichuraiana	Rw0G003810 Rw3G009750

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1794
AccB7I	CCANNNNNTGG	1 cut(s)	1115
AccII	CGCG	1 cut(s)	1786
AciI	CCGC	4 cut(s)	84, 217, 404, 1856
AclWI	GGATC	3 cut(s)	476, 1533, 2252
AcoI	YGGCCR	2 cut(s)	370, 562
AcsI	RAATTY	4 cut(s)	605, 899, 1344, 2011
AcuI	CTGAAG	1 cut(s)	1593
AfaI	GTAC	4 cut(s)	514, 556, 1710, 1737
AfiI	CCNNNNNNNGG	9 cut(s)	23, 83, 138, 773, 865, 975, 1115, 1408, 1475
AflIII	ACRYGT	2 cut(s)	1273, 1957
AjuI	GAANNNNNNNTTGG	2 cut(s)	1001, 1033
AleI	CACNNNNGTG	1 cut(s)	1025
Alw21I	GWGCWC	2 cut(s)	76, 2146
Alw26I	GTCTC	3 cut(s)	1297, 1591, 2031
Alw44I	GTGCAC	1 cut(s)	72
AlwI	GGATC	3 cut(s)	476, 1533, 2252
Ama87I	CYCGRG	1 cut(s)	574
AoxI	GGCC	5 cut(s)	25, 370, 562, 1478, 1656
ApaI	GGGCCC	1 cut(s)	1660
ApaLI	GTGCAC	1 cut(s)	72
ApeKI	GCWGC	9 cut(s)	401, 424, 763, 1068, 1088, 1130, 1338, 1447, 1948
ApoI	RAATTY	4 cut(s)	605, 899, 1344, 2011
ArsI	GACNNNNNNTTYG	2 cut(s)	950, 982
Asp700I	GAANNNNTTC	1 cut(s)	1830
AspLEI	GCGC	1 cut(s)	1786
AspS9I	GGNCC	9 cut(s)	25, 136, 293, 1151, 1283, 1398, 1478, 1656, 1657
AsuC2I	CCSGG	4 cut(s)	78, 140, 575, 576
AsuHPI	GGTGA	5 cut(s)	370, 770, 985, 1457, 2138
AsuII	TTCGAA	2 cut(s)	335, 650
AvaI	CYCGRG	1 cut(s)	574
AvaII	GGWCC	5 cut(s)	136, 293, 1151, 1283, 1398
AxyI	CCTNAGG	1 cut(s)	297
BaeGI	GKGCMC	2 cut(s)	76, 1660
BaeI	ACNNNNGTAYC	2 cut(s)	690, 723
BalI	TGGCCA	2 cut(s)	372, 564
BanII	GRGCYC	3 cut(s)	119, 575, 1660
Bbv12I	GWGCWC	2 cut(s)	76, 2146
BbvI	GCAGC	9 cut(s)	388, 411, 775, 1055, 1075, 1117, 1325, 1434, 1935
BccI	CCATC	4 cut(s)	61, 835, 1619, 1942
BciVI	GTATCC	4 cut(s)	145, 532, 691, 1206
BcnI	CCSGG	4 cut(s)	78, 140, 575, 576
BcoDI	GTCTC	3 cut(s)	1297, 1591, 2031
BfaI	CTAG	4 cut(s)	1602, 1712, 2054, 2250
BfmI	CTRYAG	2 cut(s)	425, 1327
BfuI	GTATCC	4 cut(s)	145, 532, 691, 1206
BmcAI	AGTACT	1 cut(s)	1710
Bme18I	GGWCC	5 cut(s)	136, 293, 1151, 1283, 1398
BmeT110I	CYCGRG	1 cut(s)	574
BmgT120I	GGNCC	9 cut(s)	25, 136, 293, 1151, 1283, 1398, 1478, 1656, 1657
BmiI	GGNNCC	6 cut(s)	118, 137, 1285, 1400, 1658, 1932
BmrI	ACTGGG	1 cut(s)	696
BmsI	GCATC	6 cut(s)	236, 613, 878, 1394, 1693, 1777
BmuI	ACTGGG	1 cut(s)	696
BpmI	CTGGAG	2 cut(s)	275, 1167
Bpu10I	CCTNAGC	1 cut(s)	1841
Bpu14I	TTCGAA	2 cut(s)	335, 650
BpuEI	CTTGAG	1 cut(s)	881
BpuMI	CCSGG	4 cut(s)	78, 140, 575, 576
Bsa29I	ATCGAT	1 cut(s)	2131
BsaBI	GATNNNNATC	1 cut(s)	1749
BsaI	GGTCTC	1 cut(s)	1297
BsaXI	ACNNNNNCTCC	4 cut(s)	610, 640, 989, 1019
Bsc4I	CCNNNNNNNGG	9 cut(s)	23, 83, 138, 773, 865, 975, 1115, 1408, 1475
Bse1I	ACTGG	4 cut(s)	373, 691, 702, 1100
Bse21I	CCTNAGG	1 cut(s)	297
Bse3DI	GCAATG	4 cut(s)	212, 1078, 1674, 2260
Bse8I	GATNNNNATC	1 cut(s)	1749
BseCI	ATCGAT	1 cut(s)	2131
BseGI	GGATG	5 cut(s)	310, 1684, 1708, 1789, 2053
BseJI	GATNNNNATC	1 cut(s)	1749
BseLI	CCNNNNNNNGG	9 cut(s)	23, 83, 138, 773, 865, 975, 1115, 1408, 1475
BseMI	GCAATG	4 cut(s)	212, 1078, 1674, 2260
BseMII	CTCAG	5 cut(s)	200, 311, 440, 541, 1461
BseNI	ACTGG	4 cut(s)	373, 691, 702, 1100
BseRI	GAGGAG	2 cut(s)	109, 220
BseSI	GKGCMC	2 cut(s)	76, 1660
BseXI	GCAGC	9 cut(s)	388, 411, 775, 1055, 1075, 1117, 1325, 1434, 1935
BseYI	CCCAGC	1 cut(s)	286
BsgI	GTGCAG	2 cut(s)	1934, 2220
Bsh1236I	CGCG	1 cut(s)	1786
Bsh1285I	CGRYCG	1 cut(s)	356
BshFI	GGCC	5 cut(s)	27, 372, 564, 1480, 1658
BshVI	ATCGAT	1 cut(s)	2131
BsiEI	CGRYCG	1 cut(s)	356
BsiHKAI	GWGCWC	2 cut(s)	76, 2146
BsiHKCI	CYCGRG	1 cut(s)	574
BsiSI	CCGG	4 cut(s)	78, 139, 174, 575
BslFI	GGGAC	1 cut(s)	114
BslI	CCNNNNNNNGG	9 cut(s)	23, 83, 138, 773, 865, 975, 1115, 1408, 1475
BsmAI	GTCTC	3 cut(s)	1297, 1591, 2031
BsmBI	CGTCTC	1 cut(s)	1591
BsmFI	GGGAC	1 cut(s)	114
BsmI	GAATGC	2 cut(s)	426, 1210
BsnI	GGCC	5 cut(s)	27, 372, 564, 1480, 1658
Bso31I	GGTCTC	1 cut(s)	1297
BsoBI	CYCGRG	1 cut(s)	574
Bsp119I	TTCGAA	2 cut(s)	335, 650
Bsp120I	GGGCCC	1 cut(s)	1656
Bsp1286I	GDGCHC	5 cut(s)	76, 119, 575, 1660, 2146
Bsp143I	GATC	9 cut(s)	325, 468, 1462, 1512, 1525, 1564, 1744, 1801, 2257
Bsp19I	CCATGG	1 cut(s)	550
BspACI	CCGC	4 cut(s)	84, 217, 404, 1856
BspANI	GGCC	5 cut(s)	27, 372, 564, 1480, 1658
BspCNI	CTCAG	5 cut(s)	199, 310, 441, 540, 1462
BspDI	ATCGAT	1 cut(s)	2131
BspFNI	CGCG	1 cut(s)	1786
BspHI	TCATGA	1 cut(s)	1531
BspLI	GGNNCC	6 cut(s)	118, 137, 1285, 1400, 1658, 1932
BspMAI	CTGCAG	1 cut(s)	429
BspPI	GGATC	3 cut(s)	476, 1533, 2252
BspQI	GCTCTTC	1 cut(s)	563
BspT104I	TTCGAA	2 cut(s)	335, 650
BspTNI	GGTCTC	1 cut(s)	1297
BsrDI	GCAATG	4 cut(s)	212, 1078, 1674, 2260
BsrI	ACTGG	4 cut(s)	373, 691, 702, 1100
BssMI	GATC	9 cut(s)	325, 468, 1462, 1512, 1525, 1564, 1744, 1801, 2257
BssT1I	CCWWGG	3 cut(s)	21, 550, 969
Bst4CI	ACNGT	1 cut(s)	354
Bst6I	CTCTTC	1 cut(s)	563
BstAPI	GCANNNNNTGC	1 cut(s)	1338
BstBI	TTCGAA	2 cut(s)	335, 650
BstC8I	GCNNGC	2 cut(s)	784, 1854
BstDEI	CTNAG	7 cut(s)	186, 297, 449, 527, 1041, 1470, 1841
BstDSI	CCRYGG	1 cut(s)	550
BstEII	GGTNACC	1 cut(s)	1258
BstENI	CCTNNNNNAGG	3 cut(s)	771, 863, 973
BstF5I	GGATG	5 cut(s)	310, 1684, 1708, 1789, 2053
BstFNI	CGCG	1 cut(s)	1786
BstHHI	GCGC	1 cut(s)	1786
BstKTI	GATC	9 cut(s)	328, 471, 1465, 1515, 1528, 1567, 1747, 1804, 2260
BstMAI	GTCTC	3 cut(s)	1297, 1591, 2031
BstMBI	GATC	9 cut(s)	325, 468, 1462, 1512, 1525, 1564, 1744, 1801, 2257
BstMCI	CGRYCG	1 cut(s)	356
BstMWI	GCNNNNNNNGC	7 cut(s)	46, 209, 570, 1088, 1338, 1948, 2250
BstNSI	RCATGY	3 cut(s)	1277, 1856, 1961
BstPI	GGTNACC	1 cut(s)	1258
BstSFI	CTRYAG	2 cut(s)	425, 1327
BstSLI	GKGCMC	2 cut(s)	76, 1660
BstUI	CGCG	1 cut(s)	1786
BstV1I	GCAGC	9 cut(s)	388, 411, 775, 1055, 1075, 1117, 1325, 1434, 1935
BstX2I	RGATCY	1 cut(s)	1525
BstXI	CCANNNNNNTGG	1 cut(s)	1625
BstYI	RGATCY	1 cut(s)	1525
Bsu15I	ATCGAT	1 cut(s)	2131
Bsu36I	CCTNAGG	1 cut(s)	297
BsuI	GTATCC	4 cut(s)	145, 532, 691, 1206
BsuRI	GGCC	5 cut(s)	27, 372, 564, 1480, 1658
BsuTUI	ATCGAT	1 cut(s)	2131
BtgI	CCRYGG	1 cut(s)	550
BtsCI	GGATG	5 cut(s)	310, 1684, 1708, 1789, 2053
BtsIMutI	CAGTG	3 cut(s)	194, 709, 786
Cac8I	GCNNGC	2 cut(s)	784, 1854
CciI	TCATGA	1 cut(s)	1531
CfoI	GCGC	1 cut(s)	1786
Cfr13I	GGNCC	9 cut(s)	25, 136, 293, 1151, 1283, 1398, 1478, 1656, 1657
Cfr9I	CCCGGG	1 cut(s)	574
ClaI	ATCGAT	1 cut(s)	2131
Csp6I	GTAC	4 cut(s)	513, 555, 1709, 1736
CviQI	GTAC	4 cut(s)	513, 555, 1709, 1736
DdeI	CTNAG	7 cut(s)	186, 297, 449, 527, 1041, 1470, 1841
DpnI	GATC	9 cut(s)	327, 470, 1464, 1514, 1527, 1566, 1746, 1803, 2259
DpnII	GATC	9 cut(s)	325, 468, 1462, 1512, 1525, 1564, 1744, 1801, 2257
DrdI	GACNNNNNNGTC	1 cut(s)	1794
DseDI	GACNNNNNNGTC	1 cut(s)	1794
EaeI	YGGCCR	2 cut(s)	370, 562
Eam1104I	CTCTTC	1 cut(s)	563
EarI	CTCTTC	1 cut(s)	563
Eco130I	CCWWGG	3 cut(s)	21, 550, 969
Eco24I	GRGCYC	3 cut(s)	119, 575, 1660
Eco31I	GGTCTC	1 cut(s)	1297
Eco32I	GATATC	3 cut(s)	1036, 1719, 1922
Eco47I	GGWCC	5 cut(s)	136, 293, 1151, 1283, 1398
Eco57I	CTGAAG	1 cut(s)	1593
Eco81I	CCTNAGG	1 cut(s)	297
Eco88I	CYCGRG	1 cut(s)	574
Eco91I	GGTNACC	1 cut(s)	1258
EcoNI	CCTNNNNNAGG	3 cut(s)	771, 863, 973
EcoO109I	RGGNCCY	1 cut(s)	1398
EcoO65I	GGTNACC	1 cut(s)	1258
EcoRI	GAATTC	1 cut(s)	2011
EcoRV	GATATC	3 cut(s)	1036, 1719, 1922
EcoT14I	CCWWGG	3 cut(s)	21, 550, 969
EcoT22I	ATGCAT	3 cut(s)	1686, 1770, 1854
EcoT38I	GRGCYC	3 cut(s)	119, 575, 1660
ErhI	CCWWGG	3 cut(s)	21, 550, 969
Esp3I	CGTCTC	1 cut(s)	1591
FalI	AAGNNNNNCTT	8 cut(s)	576, 608, 1001, 1033, 1047, 1079, 1409, 1441
FaqI	GGGAC	1 cut(s)	114
FauI	CCCGC	1 cut(s)	210
FokI	GGATG	5 cut(s)	317, 1671, 1715, 1776, 2060
FriOI	GRGCYC	3 cut(s)	119, 575, 1660
FspBI	CTAG	4 cut(s)	1602, 1712, 2054, 2250
GlaI	GCGC	1 cut(s)	1785
GsaI	CCCAGC	1 cut(s)	290
GsuI	CTGGAG	2 cut(s)	275, 1167
HaeIII	GGCC	5 cut(s)	27, 372, 564, 1480, 1658
HapII	CCGG	4 cut(s)	78, 139, 174, 575
HhaI	GCGC	1 cut(s)	1786
Hin6I	GCGC	1 cut(s)	1784
HinP1I	GCGC	1 cut(s)	1784
HindIII	AAGCTT	4 cut(s)	338, 984, 1043, 1423
HpaII	CCGG	4 cut(s)	78, 139, 174, 575
HphI	GGTGA	5 cut(s)	370, 770, 985, 1457, 2138
Hpy166II	GTNNAC	5 cut(s)	74, 93, 524, 726, 940
Hpy188I	TCNGA	9 cut(s)	450, 630, 874, 1054, 1540, 1591, 1624, 1723, 1930
Hpy188III	TCNNGA	9 cut(s)	254, 662, 800, 1316, 1516, 1532, 1688, 1799, 2036
Hpy8I	GTNNAC	5 cut(s)	74, 93, 524, 726, 940
HpyCH4III	ACNGT	1 cut(s)	354
HpyCH4IV	ACGT	2 cut(s)	6, 1584
HpyF10VI	GCNNNNNNNGC	7 cut(s)	46, 209, 570, 1088, 1338, 1948, 2250
HpyF3I	CTNAG	7 cut(s)	186, 297, 449, 527, 1041, 1470, 1841
HpySE526I	ACGT	2 cut(s)	6, 1584
HspAI	GCGC	1 cut(s)	1784
Kzo9I	GATC	9 cut(s)	325, 468, 1462, 1512, 1525, 1564, 1744, 1801, 2257
LguI	GCTCTTC	1 cut(s)	563
LmnI	GCTCC	3 cut(s)	122, 631, 814
Lsp1109I	GCAGC	9 cut(s)	388, 411, 775, 1055, 1075, 1117, 1325, 1434, 1935
LweI	GCATC	6 cut(s)	236, 613, 878, 1394, 1693, 1777
MaeI	CTAG	4 cut(s)	1602, 1712, 2054, 2250
MaeII	ACGT	2 cut(s)	6, 1584
MaeIII	GTNAC	4 cut(s)	1258, 2069, 2118, 2230
MalI	GATC	9 cut(s)	327, 470, 1464, 1514, 1527, 1566, 1746, 1803, 2259
MboI	GATC	9 cut(s)	325, 468, 1462, 1512, 1525, 1564, 1744, 1801, 2257
MboII	GAAGA	9 cut(s)	44, 320, 442, 580, 970, 1009, 1129, 1520, 2005
MflI	RGATCY	1 cut(s)	1525
MhlI	GDGCHC	5 cut(s)	76, 119, 575, 1660, 2146
MlsI	TGGCCA	2 cut(s)	372, 564
MluNI	TGGCCA	2 cut(s)	372, 564
MlyI	GAGTC	6 cut(s)	519, 755, 940, 998, 1463, 2033
MmeI	TCCRAC	2 cut(s)	516, 653
Mox20I	TGGCCA	2 cut(s)	372, 564
Mph1103I	ATGCAT	3 cut(s)	1686, 1770, 1854
MroXI	GAANNNNTTC	1 cut(s)	1830
MscI	TGGCCA	2 cut(s)	372, 564
MseI	TTAA	4 cut(s)	1104, 1416, 1977, 2019
MslI	CAYNNNNRTG	4 cut(s)	1025, 1623, 1679, 1956
Msp20I	TGGCCA	2 cut(s)	372, 564
MspA1I	CMGCKG	1 cut(s)	1948
MspI	CCGG	4 cut(s)	78, 139, 174, 575
Mva1269I	GAATGC	2 cut(s)	426, 1210
MvnI	CGCG	1 cut(s)	1786
MwoI	GCNNNNNNNGC	7 cut(s)	46, 209, 570, 1088, 1338, 1948, 2250
NciI	CCSGG	4 cut(s)	78, 140, 575, 576
NcoI	CCATGG	1 cut(s)	550
NdeII	GATC	9 cut(s)	325, 468, 1462, 1512, 1525, 1564, 1744, 1801, 2257
NlaIV	GGNNCC	6 cut(s)	118, 137, 1285, 1400, 1658, 1932
NmuCI	GTSAC	1 cut(s)	2069
NsiI	ATGCAT	3 cut(s)	1686, 1770, 1854
NspI	RCATGY	3 cut(s)	1277, 1856, 1961
NspV	TTCGAA	2 cut(s)	335, 650
OliI	CACNNNNGTG	1 cut(s)	1025
PaeI	GCATGC	1 cut(s)	1856
PagI	TCATGA	1 cut(s)	1531
PasI	CCCWGGG	1 cut(s)	132
PciI	ACATGT	2 cut(s)	1273, 1957
PciSI	GCTCTTC	1 cut(s)	563
PcsI	WCGNNNNNNNCGW	1 cut(s)	2128
PctI	GAATGC	2 cut(s)	426, 1210
PdmI	GAANNNNTTC	1 cut(s)	1830
PfeI	GAWTC	7 cut(s)	445, 500, 641, 665, 1535, 1592, 1895
PflFI	GACNNNGTC	1 cut(s)	528
PflMI	CCANNNNNTGG	1 cut(s)	1115
PleI	GAGTC	6 cut(s)	519, 754, 940, 998, 1462, 2033
PpsI	GAGTC	6 cut(s)	519, 754, 940, 998, 1462, 2033
PpuMI	RGGWCCY	1 cut(s)	1398
PscI	ACATGT	2 cut(s)	1273, 1957
Psp5II	RGGWCCY	1 cut(s)	1398
PspEI	GGTNACC	1 cut(s)	1258
PspFI	CCCAGC	1 cut(s)	286
PspN4I	GGNNCC	6 cut(s)	118, 137, 1285, 1400, 1658, 1932
PspOMI	GGGCCC	1 cut(s)	1656
PspPI	GGNCC	9 cut(s)	25, 136, 293, 1151, 1283, 1398, 1478, 1656, 1657
PspPPI	RGGWCCY	1 cut(s)	1398
PstI	CTGCAG	1 cut(s)	429
PsuI	RGATCY	1 cut(s)	1525
PsyI	GACNNNGTC	1 cut(s)	528
PvuII	CAGCTG	1 cut(s)	1948
RsaI	GTAC	4 cut(s)	514, 556, 1710, 1737
RsaNI	GTAC	4 cut(s)	513, 555, 1709, 1736
RseI	CAYNNNNRTG	4 cut(s)	1025, 1623, 1679, 1956
SapI	GCTCTTC	1 cut(s)	563
SaqAI	TTAA	4 cut(s)	1104, 1416, 1977, 2019
Sau3AI	GATC	9 cut(s)	325, 468, 1462, 1512, 1525, 1564, 1744, 1801, 2257
Sau96I	GGNCC	9 cut(s)	25, 136, 293, 1151, 1283, 1398, 1478, 1656, 1657
ScaI	AGTACT	1 cut(s)	1710
SchI	GAGTC	6 cut(s)	519, 755, 940, 998, 1463, 2033
SduI	GDGCHC	5 cut(s)	76, 119, 575, 1660, 2146
SfaNI	GCATC	6 cut(s)	236, 613, 878, 1394, 1693, 1777
SfcI	CTRYAG	2 cut(s)	425, 1327
SfuI	TTCGAA	2 cut(s)	335, 650
SinI	GGWCC	5 cut(s)	136, 293, 1151, 1283, 1398
SmaI	CCCGGG	1 cut(s)	576
SmiMI	CAYNNNNRTG	4 cut(s)	1025, 1623, 1679, 1956
SmlI	CTYRAG	1 cut(s)	860
SmoI	CTYRAG	1 cut(s)	860
SphI	GCATGC	1 cut(s)	1856
SsiI	CCGC	4 cut(s)	84, 217, 404, 1856
SspMI	CTAG	4 cut(s)	1602, 1712, 2054, 2250
StyI	CCWWGG	3 cut(s)	21, 550, 969
TaaI	ACNGT	1 cut(s)	354
TaiI	ACGT	2 cut(s)	9, 1587
TaqI	TCGA	7 cut(s)	335, 644, 650, 956, 2035, 2131, 2188
TatI	WGTACW	2 cut(s)	1708, 1735
TauI	GCSGC	2 cut(s)	87, 407
TfiI	GAWTC	7 cut(s)	445, 500, 641, 665, 1535, 1592, 1895
Tru1I	TTAA	4 cut(s)	1104, 1416, 1977, 2019
Tru9I	TTAA	4 cut(s)	1104, 1416, 1977, 2019
TscAI	CASTG	3 cut(s)	194, 709, 793
TseFI	GTSAC	1 cut(s)	2069
TseI	GCWGC	9 cut(s)	401, 424, 763, 1068, 1088, 1130, 1338, 1447, 1948
Tsp45I	GTSAC	1 cut(s)	2069
TspDTI	ATGAA	8 cut(s)	27, 299, 617, 1037, 1307, 1520, 1548, 2112
TspGWI	ACGGA	4 cut(s)	112, 522, 1567, 2088
TspMI	CCCGGG	1 cut(s)	574
TspRI	CASTG	3 cut(s)	194, 709, 793
Tth111I	GACNNNGTC	1 cut(s)	528
Van91I	CCANNNNNTGG	1 cut(s)	1115
VneI	GTGCAC	1 cut(s)	72
VpaK11BI	GGWCC	5 cut(s)	136, 293, 1151, 1283, 1398
XagI	CCTNNNNNAGG	3 cut(s)	771, 863, 973
XapI	RAATTY	4 cut(s)	605, 899, 1344, 2011
XceI	RCATGY	3 cut(s)	1277, 1856, 1961
XcmI	CCANNNNNNNNNTGG	1 cut(s)	557
XmaI	CCCGGG	1 cut(s)	574
XmnI	GAANNNNTTC	1 cut(s)	1830
XspI	CTAG	4 cut(s)	1602, 1712, 2054, 2250
ZrmI	AGTACT	1 cut(s)	1710
Zsp2I	ATGCAT	3 cut(s)	1686, 1770, 1854

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.