Pyruvate kinase
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G36580 AT3G52990 AT3G52990 |
| fragaria_vesca | FvH4_6g17480 FvH4_6g17480 FvH4_6g17480 FvH4_6g17480 FvH4_7g06490 FvH4_7g06490 FvH4_7g06490 FvH4_7g06490 FvH4_7g06490 |
| malus_domestica | MD02G1244000.v1.1 MD07G1072900.v1.1 MD07G1073000.v1.1 MD12G1096900.v1.1 MD14G1094200.v1.1 |
| prunus_persica | Prupe.2G091200_v2.0.a1 Prupe.2G091200_v2.0.a1 Prupe.2G091200_v2.0.a1 Prupe.7G120700_v2.0.a1 Prupe.7G120700_v2.0.a1 |
| pyrus_communis | pycom07g05600 pycom07g05630 pycom12g09800 pycom14g09200 |
| rosa_chinensis | RchiOBHm_Chr1g0334861 RchiOBHm_Chr3g0471721 |
| rosa_laevigata | RLG00000024139 RLG00000029414 |
| rosa_multiflora | Rmu_sc0000574.1_g000046 Rmu_sc0005631.1_g000026 Rmu_sc0026537.1_g000003 |
| rosa_roxburghii | Rroxscaffold_4G00316390 Rroxscaffold_6G00409610 |
| rosa_rugosa | Rorug01G0117400 Rorug03G0119000 Rorug03G0119100 Rorug03G0119200 |
| rosa_samantha | Rh1CG133000 Rh3AG170600 Rh3BG196300 Rh3DG178700 |
| rosa_wichuraiana | Rw0G009040 Rw1G011670 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 3 cut(s) | 148, 481, 729 |
| AccB1I | GGYRCC | 1 cut(s) | 902 |
| AccI | GTMKAC | 1 cut(s) | 1301 |
| AccII | CGCG | 2 cut(s) | 125, 804 |
| AciI | CCGC | 3 cut(s) | 125, 568, 1064 |
| AclWI | GGATC | 1 cut(s) | 1274 |
| AcsI | RAATTY | 4 cut(s) | 403, 618, 706, 957 |
| AcuI | CTGAAG | 5 cut(s) | 228, 387, 867, 1101, 1226 |
| AfaI | GTAC | 3 cut(s) | 109, 320, 1148 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 226, 227 |
| AflII | CTTAAG | 1 cut(s) | 191 |
| AgsI | TTSAA | 6 cut(s) | 188, 635, 749, 985, 1003, 1311 |
| AjnI | CCWGG | 1 cut(s) | 69 |
| AluBI | AGCT | 7 cut(s) | 118, 250, 680, 755, 1204, 1215, 1435 |
| AluI | AGCT | 7 cut(s) | 118, 250, 680, 755, 1204, 1215, 1435 |
| Alw21I | GWGCWC | 1 cut(s) | 1437 |
| Alw26I | GTCTC | 2 cut(s) | 68, 902 |
| AlwI | GGATC | 1 cut(s) | 1274 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 322 |
| Ama87I | CYCGRG | 1 cut(s) | 149 |
| AoxI | GGCC | 2 cut(s) | 313, 833 |
| ApeKI | GCWGC | 3 cut(s) | 755, 1073, 1127 |
| ApoI | RAATTY | 4 cut(s) | 403, 618, 706, 957 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 980 |
| AspLEI | GCGC | 1 cut(s) | 125 |
| AspS9I | GGNCC | 1 cut(s) | 146 |
| AsuC2I | CCSGG | 2 cut(s) | 59, 1186 |
| AsuHPI | GGTGA | 4 cut(s) | 59, 611, 1096, 1418 |
| AvaI | CYCGRG | 1 cut(s) | 149 |
| AvaII | GGWCC | 1 cut(s) | 146 |
| BanI | GGYRCC | 1 cut(s) | 902 |
| BanII | GRGCYC | 1 cut(s) | 1437 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 325, 357 |
| BauI | CACGAG | 2 cut(s) | 46, 840 |
| BbsI | GAAGAC | 1 cut(s) | 973 |
| Bbv12I | GWGCWC | 1 cut(s) | 1437 |
| BbvCI | CCTCAGC | 2 cut(s) | 966, 1060 |
| BbvI | GCAGC | 3 cut(s) | 742, 1085, 1114 |
| BccI | CCATC | 5 cut(s) | 194, 247, 266, 677, 947 |
| BciT130I | CCWGG | 1 cut(s) | 71 |
| BclI | TGATCA | 2 cut(s) | 223, 1342 |
| BcnI | CCSGG | 2 cut(s) | 59, 1186 |
| BcoDI | GTCTC | 2 cut(s) | 68, 902 |
| BfmI | CTRYAG | 1 cut(s) | 948 |
| BfrI | CTTAAG | 1 cut(s) | 191 |
| BfuAI | ACCTGC | 3 cut(s) | 148, 481, 729 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 1232 |
| BisI | GCNGC | 3 cut(s) | 756, 1074, 1128 |
| BlsI | GCNGC | 3 cut(s) | 757, 1075, 1129 |
| BmcAI | AGTACT | 1 cut(s) | 109 |
| Bme1390I | CCNGG | 3 cut(s) | 59, 71, 1186 |
| Bme18I | GGWCC | 1 cut(s) | 146 |
| BmeT110I | CYCGRG | 1 cut(s) | 149 |
| BmgT120I | GGNCC | 1 cut(s) | 146 |
| BmiI | GGNNCC | 5 cut(s) | 147, 148, 424, 904, 1225 |
| BmrFI | CCNGG | 3 cut(s) | 59, 71, 1186 |
| BmsI | GCATC | 5 cut(s) | 877, 1064, 1100, 1364, 1399 |
| BoxI | GACNNNNGTC | 1 cut(s) | 606 |
| BpiI | GAAGAC | 1 cut(s) | 973 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 823, 855 |
| BpmI | CTGGAG | 1 cut(s) | 1242 |
| Bpu10I | CCTNAGC | 2 cut(s) | 966, 1060 |
| BpuEI | CTTGAG | 4 cut(s) | 74, 432, 850, 1175 |
| BpuMI | CCSGG | 2 cut(s) | 59, 1186 |
| BsaJI | CCNNGG | 3 cut(s) | 169, 700, 1184 |
| BsaWI | WCCGGW | 1 cut(s) | 13 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 288, 318, 369, 399 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 226, 227 |
| Bse1I | ACTGG | 6 cut(s) | 316, 334, 420, 1163, 1225, 1305 |
| BseBI | CCWGG | 1 cut(s) | 71 |
| BseDI | CCNNGG | 3 cut(s) | 169, 700, 1184 |
| BseGI | GGATG | 3 cut(s) | 14, 1055, 1179 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 226, 227 |
| BseMII | CTCAG | 6 cut(s) | 619, 720, 957, 963, 1074, 1287 |
| BseNI | ACTGG | 6 cut(s) | 316, 334, 420, 1163, 1225, 1305 |
| BseXI | GCAGC | 3 cut(s) | 742, 1085, 1114 |
| BseYI | CCCAGC | 1 cut(s) | 4 |
| Bsh1236I | CGCG | 2 cut(s) | 125, 804 |
| Bsh1285I | CGRYCG | 1 cut(s) | 1381 |
| BshFI | GGCC | 2 cut(s) | 315, 835 |
| BshNI | GGYRCC | 1 cut(s) | 902 |
| BsiEI | CGRYCG | 1 cut(s) | 1381 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1437 |
| BsiHKCI | CYCGRG | 1 cut(s) | 149 |
| BsiSI | CCGG | 3 cut(s) | 14, 59, 1186 |
| BslFI | GGGAC | 2 cut(s) | 132, 243 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 226, 227 |
| BsmAI | GTCTC | 2 cut(s) | 68, 902 |
| BsmFI | GGGAC | 2 cut(s) | 132, 243 |
| BsmI | GAATGC | 1 cut(s) | 516 |
| BsnI | GGCC | 2 cut(s) | 315, 835 |
| BsoBI | CYCGRG | 1 cut(s) | 149 |
| Bsp1286I | GDGCHC | 1 cut(s) | 1437 |
| Bsp143I | GATC | 4 cut(s) | 180, 223, 1279, 1342 |
| BspACI | CCGC | 3 cut(s) | 125, 568, 1064 |
| BspANI | GGCC | 2 cut(s) | 315, 835 |
| BspCNI | CTCAG | 6 cut(s) | 618, 721, 958, 964, 1073, 1288 |
| BspFNI | CGCG | 2 cut(s) | 125, 804 |
| BspLI | GGNNCC | 5 cut(s) | 147, 148, 424, 904, 1225 |
| BspMI | ACCTGC | 3 cut(s) | 148, 481, 729 |
| BspPI | GGATC | 1 cut(s) | 1274 |
| BspT107I | GGYRCC | 1 cut(s) | 902 |
| BspTI | CTTAAG | 1 cut(s) | 191 |
| BsrI | ACTGG | 6 cut(s) | 316, 334, 420, 1163, 1225, 1305 |
| BssECI | CCNNGG | 3 cut(s) | 169, 700, 1184 |
| BssMI | GATC | 4 cut(s) | 180, 223, 1279, 1342 |
| BssSI | CACGAG | 2 cut(s) | 46, 840 |
| Bst2BI | CACGAG | 2 cut(s) | 46, 840 |
| Bst2UI | CCWGG | 1 cut(s) | 71 |
| Bst4CI | ACNGT | 4 cut(s) | 142, 304, 949, 1012 |
| Bst6I | CTCTTC | 2 cut(s) | 98, 918 |
| BstAFI | CTTAAG | 1 cut(s) | 191 |
| BstC8I | GCNNGC | 2 cut(s) | 789, 1275 |
| BstDSI | CCRYGG | 1 cut(s) | 700 |
| BstEII | GGTNACC | 1 cut(s) | 599 |
| BstF5I | GGATG | 3 cut(s) | 14, 1055, 1179 |
| BstFNI | CGCG | 2 cut(s) | 125, 804 |
| BstHHI | GCGC | 1 cut(s) | 125 |
| BstKTI | GATC | 4 cut(s) | 183, 226, 1282, 1345 |
| BstMAI | GTCTC | 2 cut(s) | 68, 902 |
| BstMBI | GATC | 4 cut(s) | 180, 223, 1279, 1342 |
| BstMCI | CGRYCG | 1 cut(s) | 1381 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 416, 1061, 1070, 1232 |
| BstNI | CCWGG | 1 cut(s) | 71 |
| BstNSI | RCATGY | 1 cut(s) | 557 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 606 |
| BstPI | GGTNACC | 1 cut(s) | 599 |
| BstSCI | CCNGG | 3 cut(s) | 57, 69, 1184 |
| BstSFI | CTRYAG | 1 cut(s) | 948 |
| BstUI | CGCG | 2 cut(s) | 125, 804 |
| BstV1I | GCAGC | 3 cut(s) | 742, 1085, 1114 |
| BstV2I | GAAGAC | 1 cut(s) | 973 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1403 |
| BsuRI | GGCC | 2 cut(s) | 315, 835 |
| BtgI | CCRYGG | 1 cut(s) | 700 |
| BtsCI | GGATG | 3 cut(s) | 14, 1055, 1179 |
| BtsI | GCAGTG | 2 cut(s) | 33, 291 |
| BtsIMutI | CAGTG | 5 cut(s) | 33, 138, 291, 327, 413 |
| BveI | ACCTGC | 3 cut(s) | 148, 481, 729 |
| Cac8I | GCNNGC | 2 cut(s) | 789, 1275 |
| CaiI | CAGNNNCTG | 1 cut(s) | 322 |
| CfoI | GCGC | 1 cut(s) | 125 |
| Cfr13I | GGNCC | 1 cut(s) | 146 |
| Csp6I | GTAC | 3 cut(s) | 108, 319, 1147 |
| CviAII | CATG | 4 cut(s) | 351, 554, 775, 1346 |
| CviQI | GTAC | 3 cut(s) | 108, 319, 1147 |
| DpnI | GATC | 4 cut(s) | 182, 225, 1281, 1344 |
| DpnII | GATC | 4 cut(s) | 180, 223, 1279, 1342 |
| Eam1104I | CTCTTC | 2 cut(s) | 98, 918 |
| EarI | CTCTTC | 2 cut(s) | 98, 918 |
| EciI | GGCGGA | 1 cut(s) | 557 |
| Ecl136II | GAGCTC | 1 cut(s) | 1435 |
| Eco24I | GRGCYC | 1 cut(s) | 1437 |
| Eco47I | GGWCC | 1 cut(s) | 146 |
| Eco53kI | GAGCTC | 1 cut(s) | 1435 |
| Eco57I | CTGAAG | 5 cut(s) | 228, 387, 867, 1101, 1226 |
| Eco88I | CYCGRG | 1 cut(s) | 149 |
| Eco91I | GGTNACC | 1 cut(s) | 599 |
| EcoICRI | GAGCTC | 1 cut(s) | 1435 |
| EcoO109I | RGGNCCY | 1 cut(s) | 146 |
| EcoO65I | GGTNACC | 1 cut(s) | 599 |
| EcoRI | GAATTC | 1 cut(s) | 403 |
| EcoRII | CCWGG | 1 cut(s) | 69 |
| EcoT22I | ATGCAT | 1 cut(s) | 274 |
| EcoT38I | GRGCYC | 1 cut(s) | 1437 |
| FaeI | CATG | 4 cut(s) | 354, 557, 778, 1349 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 744, 776, 1199, 1231 |
| FaqI | GGGAC | 2 cut(s) | 132, 243 |
| FatI | CATG | 4 cut(s) | 350, 553, 774, 1345 |
| FbaI | TGATCA | 2 cut(s) | 223, 1342 |
| FblI | GTMKAC | 1 cut(s) | 1301 |
| Fnu4HI | GCNGC | 3 cut(s) | 756, 1074, 1128 |
| FokI | GGATG | 3 cut(s) | 21, 1042, 1166 |
| FriOI | GRGCYC | 1 cut(s) | 1437 |
| Fsp4HI | GCNGC | 3 cut(s) | 756, 1074, 1128 |
| GlaI | GCGC | 1 cut(s) | 124 |
| GluI | GCNGC | 3 cut(s) | 756, 1074, 1128 |
| GsaI | CCCAGC | 1 cut(s) | 8 |
| GsuI | CTGGAG | 1 cut(s) | 1242 |
| HaeIII | GGCC | 2 cut(s) | 315, 835 |
| HapII | CCGG | 3 cut(s) | 14, 59, 1186 |
| HhaI | GCGC | 1 cut(s) | 125 |
| Hin1II | CATG | 4 cut(s) | 354, 557, 778, 1349 |
| Hin6I | GCGC | 1 cut(s) | 123 |
| HinP1I | GCGC | 1 cut(s) | 123 |
| HindIII | AAGCTT | 1 cut(s) | 116 |
| HinfI | GANTC | 6 cut(s) | 36, 667, 910, 1046, 1298, 1319 |
| HpaII | CCGG | 3 cut(s) | 14, 59, 1186 |
| HphI | GGTGA | 4 cut(s) | 59, 611, 1096, 1418 |
| Hpy166II | GTNNAC | 4 cut(s) | 166, 327, 432, 1302 |
| Hpy188I | TCNGA | 5 cut(s) | 216, 247, 367, 478, 612 |
| Hpy188III | TCNNGA | 7 cut(s) | 149, 1003, 1119, 1192, 1340, 1359, 1423 |
| Hpy8I | GTNNAC | 4 cut(s) | 166, 327, 432, 1302 |
| HpyAV | CCTTC | 4 cut(s) | 286, 727, 970, 1081 |
| HpyCH4III | ACNGT | 4 cut(s) | 142, 304, 949, 1012 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 416, 1061, 1070, 1232 |
| Hsp92II | CATG | 4 cut(s) | 354, 557, 778, 1349 |
| HspAI | GCGC | 1 cut(s) | 123 |
| KflI | GGGWCCC | 1 cut(s) | 146 |
| Ksp22I | TGATCA | 2 cut(s) | 223, 1342 |
| Kzo9I | GATC | 4 cut(s) | 180, 223, 1279, 1342 |
| LmnI | GCTCC | 2 cut(s) | 1212, 1223 |
| Lsp1109I | GCAGC | 3 cut(s) | 742, 1085, 1114 |
| LweI | GCATC | 5 cut(s) | 877, 1064, 1100, 1364, 1399 |
| MaeIII | GTNAC | 4 cut(s) | 286, 599, 770, 796 |
| MalI | GATC | 4 cut(s) | 182, 225, 1281, 1344 |
| MboI | GATC | 4 cut(s) | 180, 223, 1279, 1342 |
| MboII | GAAGA | 8 cut(s) | 115, 190, 234, 572, 887, 905, 973, 1107 |
| MhlI | GDGCHC | 1 cut(s) | 1437 |
| MluCI | AATT | 6 cut(s) | 403, 522, 618, 706, 891, 957 |
| MlyI | GAGTC | 3 cut(s) | 904, 1307, 1328 |
| MmeI | TCCRAC | 3 cut(s) | 114, 336, 1003 |
| Mph1103I | ATGCAT | 1 cut(s) | 274 |
| MroXI | GAANNNNTTC | 1 cut(s) | 980 |
| MseI | TTAA | 4 cut(s) | 192, 267, 399, 650 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1082 |
| MspA1I | CMGCKG | 2 cut(s) | 1064, 1204 |
| MspCI | CTTAAG | 1 cut(s) | 191 |
| MspI | CCGG | 3 cut(s) | 14, 59, 1186 |
| MspR9I | CCNGG | 3 cut(s) | 59, 71, 1186 |
| Mva1269I | GAATGC | 1 cut(s) | 516 |
| MvaI | CCWGG | 1 cut(s) | 71 |
| MvnI | CGCG | 2 cut(s) | 125, 804 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 416, 1061, 1070, 1232 |
| NciI | CCSGG | 2 cut(s) | 59, 1186 |
| NdeII | GATC | 4 cut(s) | 180, 223, 1279, 1342 |
| NlaIII | CATG | 4 cut(s) | 354, 557, 778, 1349 |
| NlaIV | GGNNCC | 5 cut(s) | 147, 148, 424, 904, 1225 |
| NmeAIII | GCCGAG | 1 cut(s) | 931 |
| NmuCI | GTSAC | 2 cut(s) | 286, 599 |
| NsiI | ATGCAT | 1 cut(s) | 274 |
| NspI | RCATGY | 1 cut(s) | 557 |
| PctI | GAATGC | 1 cut(s) | 516 |
| PdmI | GAANNNNTTC | 1 cut(s) | 980 |
| PfeI | GAWTC | 3 cut(s) | 36, 667, 1046 |
| PkrI | GCNGC | 3 cut(s) | 757, 1075, 1129 |
| PleI | GAGTC | 3 cut(s) | 904, 1306, 1327 |
| PpsI | GAGTC | 3 cut(s) | 904, 1306, 1327 |
| PpuMI | RGGWCCY | 1 cut(s) | 146 |
| PshAI | GACNNNNGTC | 1 cut(s) | 606 |
| Psp124BI | GAGCTC | 1 cut(s) | 1437 |
| Psp5II | RGGWCCY | 1 cut(s) | 146 |
| Psp6I | CCWGG | 1 cut(s) | 69 |
| PspEI | GGTNACC | 1 cut(s) | 599 |
| PspFI | CCCAGC | 1 cut(s) | 4 |
| PspGI | CCWGG | 1 cut(s) | 69 |
| PspN4I | GGNNCC | 5 cut(s) | 147, 148, 424, 904, 1225 |
| PspPI | GGNCC | 1 cut(s) | 146 |
| PspPPI | RGGWCCY | 1 cut(s) | 146 |
| PstNI | CAGNNNCTG | 1 cut(s) | 322 |
| PvuII | CAGCTG | 1 cut(s) | 1204 |
| RsaI | GTAC | 3 cut(s) | 109, 320, 1148 |
| RsaNI | GTAC | 3 cut(s) | 108, 319, 1147 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1082 |
| SacI | GAGCTC | 1 cut(s) | 1437 |
| SaqAI | TTAA | 4 cut(s) | 192, 267, 399, 650 |
| SatI | GCNGC | 3 cut(s) | 756, 1074, 1128 |
| Sau3AI | GATC | 4 cut(s) | 180, 223, 1279, 1342 |
| Sau96I | GGNCC | 1 cut(s) | 146 |
| ScaI | AGTACT | 1 cut(s) | 109 |
| SchI | GAGTC | 3 cut(s) | 904, 1307, 1328 |
| ScrFI | CCNGG | 3 cut(s) | 59, 71, 1186 |
| SduI | GDGCHC | 1 cut(s) | 1437 |
| SfaNI | GCATC | 5 cut(s) | 877, 1064, 1100, 1364, 1399 |
| SfcI | CTRYAG | 1 cut(s) | 948 |
| SinI | GGWCC | 1 cut(s) | 146 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1082 |
| SmlI | CTYRAG | 5 cut(s) | 89, 191, 447, 829, 1190 |
| SmoI | CTYRAG | 5 cut(s) | 89, 191, 447, 829, 1190 |
| Sse9I | AATT | 6 cut(s) | 403, 522, 618, 706, 891, 957 |
| SsiI | CCGC | 3 cut(s) | 125, 568, 1064 |
| SstI | GAGCTC | 1 cut(s) | 1437 |
| StyD4I | CCNGG | 3 cut(s) | 57, 69, 1184 |
| TaaI | ACNGT | 4 cut(s) | 142, 304, 949, 1012 |
| TaqI | TCGA | 7 cut(s) | 34, 39, 459, 550, 1069, 1285, 1437 |
| TaqII | GACCGA | 1 cut(s) | 1395 |
| TasI | AATT | 6 cut(s) | 403, 522, 618, 706, 891, 957 |
| TatI | WGTACW | 1 cut(s) | 107 |
| TfiI | GAWTC | 3 cut(s) | 36, 667, 1046 |
| Tru1I | TTAA | 4 cut(s) | 192, 267, 399, 650 |
| Tru9I | TTAA | 4 cut(s) | 192, 267, 399, 650 |
| TscAI | CASTG | 5 cut(s) | 33, 145, 291, 334, 420 |
| TseFI | GTSAC | 2 cut(s) | 286, 599 |
| TseI | GCWGC | 3 cut(s) | 755, 1073, 1127 |
| Tsp45I | GTSAC | 2 cut(s) | 286, 599 |
| TspDTI | ATGAA | 2 cut(s) | 298, 443 |
| TspGWI | ACGGA | 1 cut(s) | 894 |
| TspRI | CASTG | 5 cut(s) | 33, 145, 291, 334, 420 |
| Vha464I | CTTAAG | 1 cut(s) | 191 |
| VpaK11BI | GGWCC | 1 cut(s) | 146 |
| XapI | RAATTY | 4 cut(s) | 403, 618, 706, 957 |
| XceI | RCATGY | 1 cut(s) | 557 |
| XmiI | GTMKAC | 1 cut(s) | 1301 |
| XmnI | GAANNNNTTC | 1 cut(s) | 980 |
| ZrmI | AGTACT | 1 cut(s) | 109 |
| Zsp2I | ATGCAT | 1 cut(s) | 274 |