Rw1G011670

Pyruvate kinase

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr1
Physical Location & Seq
Forward (+)
26147723 .. 26156858
9136 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw1G011670.1

Sequence Viewer

Length: 1464 bp
ATGCTTCCGAATCACTTGCTCCTCCAAGAGCCTATCAGAATGGCCTCCATCCTGGAGCCTTCTAAGCCTACATTCTTTCCTGCATTGACAAAGATAGTTGGAACACTTGGTCCAAATTCCCGATCCGTTGAGATAATATCCGATTGCCTGGAGGCAGGAATGTCTGTGGCACGGTTTGACTTCTCATGGGGCGATACTGATTTTCACCAAGAGACATTGGAAAATCTGAGGATTGCCATCAAGAGAACCAGGAAGCTGTGTGCAGTTATGCTAGACACAGTGGGTCCAGAGTTGCAGGTAGTGAATAAAACTCAGTGCCCCATTTCTCTTGAGGCAGAGAACGTGGTTGTCCTAACACCTGATCAAGATAAAGATGCCACTCCAAAACTCTTACCCATAAATTTTAGTGGGCTTGCAAAGGCCGTGCAGAAAGGTGACACCATTTTTATTGGTCAATACCTCTTTACAGGAAGTGAAACTACTTCTGTATGGCTGGAGGTCACTGAGGTGATTGGTGAGGATGTGGTTTGTCTCATAAAGAACTCTGCTATCTTGGCAGGGTCGATGTATACTCTGCATGTTTCTCAAATTCGTATTGATCAGCCTACACTGACCGATCTAGATAAGGAGGTCATAAGAACGTGGGGTGTTCGTAACAATATTGACTTCCTCTCATTGTCATACACCCGTCATGCTGAAGATGTTCGCCAGGCCCGTGAATTTCTTTCGAAGTTAGGGGACATGAACCAAACTCAGATTTTTGCTAAAATTGAAAATGTTGAGGGATTAAAGAATTTTGATGATATCTTACAAGAAGCTGATGGAATTATCCTCGCTCGCGGAAATTTGGGAATAGATGTTCCACCGGAGAAGGTGTTCTTGTTTCAAAAGGCTGCTGTTCACAAGTGCAACATGGCTGGAAAGCCAGCAGTGGTGACTCGAGTTGTAGACAGTATGACAGACAACCTAAGACCTACTCGTGCTGAAGCAACTGATGTTGCCAATATAGTATTGGATGGAAGTGACGCAATTCTTCTAGGTGCAGAGACCCTGCGGGGTTTGTACCCTGTCGAAACCATCTCCATTGTTGGAAAGATTTGTGCCGAGGCTGAGAAAGTCTTCAACCAAGATCTGTATTTTAAGAGGGCTGTGAAATATATTGGAGAGCCAATGACCCACTTGGAATCTATTGCTTCCTCTGCGGTACGTGCAGCCATTAAGGTGAAGGCCTCAGTGATTATATGCTTTACTTCATCTGGAAGAGCTGCAAGGTTGATCTCAAAGTACAGACCAACAATGCCTGTGCTTTCTGTTGTCATCCCTCGGGTTAAGACAAATCAGCTCCGATGGACATTTTCTGGTGCTTATGAGGCAAGGCAATCACTTATGGTCAGAGGTCTTTTCCCAATGCTTGCAGATCCTCGACATCCTGTAAGAATGTTTCTGTTTAAGAAAACCTTTTAG
Functional Annotation
Pfam Domains
Protein Families

Protein Analysis

487

Amino Acids

54.03

Weight (kDa)

7.59

Isoelectric Point (pI)

30.49

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PK PF00224 30 - 360 2.1e-87 Pyruvate kinase, barrel domain
PK_C PF02887 395 - 474 7e-16 Pyruvate kinase, alpha/beta domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 286
AccI GTMKAC 2 cut(s) 569, 948
AccII CGCG 1 cut(s) 840
AciI CCGC 3 cut(s) 840, 1054, 1202
AclWI GGATC 2 cut(s) 117, 1412
AcsI RAATTY 6 cut(s) 115, 400, 588, 719, 793, 844
AcuI CTGAAG 2 cut(s) 717, 1005
AfaI GTAC 3 cut(s) 1064, 1206, 1286
AgsI TTSAA 3 cut(s) 773, 887, 1123
AjnI CCWGG 4 cut(s) 51, 147, 248, 708
AleI CACNNNNGTG 1 cut(s) 506
AloI GAACNNNNNNTCC 6 cut(s) 94, 126, 843, 860, 875, 892
AluBI AGCT 4 cut(s) 256, 818, 1265, 1342
AluI AGCT 4 cut(s) 256, 818, 1265, 1342
Alw26I GTCTC 3 cut(s) 206, 536, 1040
AlwI GGATC 2 cut(s) 117, 1412
Ama87I CYCGRG 2 cut(s) 939, 1323
AoxI GGCC 4 cut(s) 42, 420, 711, 1227
ApeKI GCWGC 3 cut(s) 893, 1211, 1265
ApoI RAATTY 6 cut(s) 115, 400, 588, 719, 793, 844
Asp700I GAANNNNTTC 3 cut(s) 702, 875, 1118
AspS9I GGNCC 3 cut(s) 110, 284, 712
AsuHPI GGTGA 6 cut(s) 197, 446, 520, 527, 946, 1234
AsuII TTCGAA 1 cut(s) 728
AvaI CYCGRG 2 cut(s) 939, 1323
AvaII GGWCC 2 cut(s) 110, 284
BaeGI GKGCMC 1 cut(s) 320
BarI GAAGNNNNNNTAC 2 cut(s) 463, 495
BauI CACGAG 1 cut(s) 978
BbsI GAAGAC 1 cut(s) 1111
BbvI GCAGC 3 cut(s) 880, 1223, 1252
BccI CCATC 6 cut(s) 56, 245, 815, 1010, 1085, 1341
BceAI ACGGC 1 cut(s) 407
BcgI CGANNNNNNTGC 1 cut(s) 32
BciT130I CCWGG 4 cut(s) 53, 149, 250, 710
BclI TGATCA 2 cut(s) 361, 598
BcoDI GTCTC 3 cut(s) 206, 536, 1040
BfaI CTAG 3 cut(s) 272, 620, 1037
BfuAI ACCTGC 1 cut(s) 286
BglII AGATCT 1 cut(s) 1129
BisI GCNGC 3 cut(s) 894, 1212, 1266
BlsI GCNGC 3 cut(s) 895, 1213, 1267
Bme1390I CCNGG 4 cut(s) 53, 149, 250, 710
Bme18I GGWCC 2 cut(s) 110, 284
BmeT110I CYCGRG 2 cut(s) 939, 1323
BmgT120I GGNCC 3 cut(s) 110, 284, 712
BmiI GGNNCC 2 cut(s) 57, 285
BmrFI CCNGG 4 cut(s) 53, 149, 250, 710
BmsI GCATC 1 cut(s) 364
BpiI GAAGAC 1 cut(s) 1111
BpmI CTGGAG 3 cut(s) 74, 170, 515
Bpu14I TTCGAA 1 cut(s) 728
BpuEI CTTGAG 1 cut(s) 350
BsaAI YACGTR 1 cut(s) 1208
BsaBI GATNNNNATC 1 cut(s) 236
BsaI GGTCTC 1 cut(s) 1040
BsaJI CCNNGG 2 cut(s) 1104, 1322
BsaWI WCCGGW 1 cut(s) 865
BsaXI ACNNNNNCTCC 2 cut(s) 860, 890
Bse8I GATNNNNATC 1 cut(s) 236
BseBI CCWGG 4 cut(s) 53, 149, 250, 710
BseDI CCNNGG 2 cut(s) 1104, 1322
BseGI GGATG 5 cut(s) 48, 526, 1021, 1317, 1426
BseJI GATNNNNATC 1 cut(s) 236
BseMII CTCAG 6 cut(s) 218, 326, 495, 767, 1101, 1245
BseRI GAGGAG 1 cut(s) 11
BseSI GKGCMC 1 cut(s) 320
BseXI GCAGC 3 cut(s) 880, 1223, 1252
BsgI GTGCAG 4 cut(s) 282, 446, 1062, 1230
Bsh1236I CGCG 1 cut(s) 840
BshFI GGCC 4 cut(s) 44, 422, 713, 1229
BsiHKCI CYCGRG 2 cut(s) 939, 1323
BsiSI CCGG 1 cut(s) 866
BslFI GGGAC 1 cut(s) 752
BsmAI GTCTC 3 cut(s) 206, 536, 1040
BsmFI GGGAC 1 cut(s) 752
BsnI GGCC 4 cut(s) 44, 422, 713, 1229
Bso31I GGTCTC 1 cut(s) 1040
BsoBI CYCGRG 2 cut(s) 939, 1323
Bsp119I TTCGAA 1 cut(s) 728
Bsp1286I GDGCHC 1 cut(s) 320
Bsp143I GATC 7 cut(s) 122, 361, 598, 616, 1129, 1275, 1417
BspACI CCGC 3 cut(s) 840, 1054, 1202
BspANI GGCC 4 cut(s) 44, 422, 713, 1229
BspCNI CTCAG 6 cut(s) 219, 325, 496, 766, 1102, 1244
BspFNI CGCG 1 cut(s) 840
BspLI GGNNCC 2 cut(s) 57, 285
BspMI ACCTGC 1 cut(s) 286
BspPI GGATC 2 cut(s) 117, 1412
BspQI GCTCTTC 1 cut(s) 1255
BspT104I TTCGAA 1 cut(s) 728
BspTNI GGTCTC 1 cut(s) 1040
BssECI CCNNGG 2 cut(s) 1104, 1322
BssMI GATC 7 cut(s) 122, 361, 598, 616, 1129, 1275, 1417
BssNAI GTATAC 1 cut(s) 570
BssSI CACGAG 1 cut(s) 978
Bst1107I GTATAC 1 cut(s) 570
Bst2BI CACGAG 1 cut(s) 978
Bst2UI CCWGG 4 cut(s) 53, 149, 250, 710
Bst4CI ACNGT 3 cut(s) 174, 280, 953
Bst6I CTCTTC 1 cut(s) 1255
BstBAI YACGTR 1 cut(s) 1208
BstBI TTCGAA 1 cut(s) 728
BstC8I GCNNGC 4 cut(s) 414, 838, 927, 1413
BstDEI CTNAG 8 cut(s) 63, 227, 312, 504, 753, 968, 1110, 1231
BstF5I GGATG 5 cut(s) 48, 526, 1021, 1317, 1426
BstFNI CGCG 1 cut(s) 840
BstKTI GATC 7 cut(s) 125, 364, 601, 619, 1132, 1278, 1420
BstMAI GTCTC 3 cut(s) 206, 536, 1040
BstMBI GATC 7 cut(s) 122, 361, 598, 616, 1129, 1275, 1417
BstMWI GCNNNNNNNGC 5 cut(s) 64, 554, 1199, 1208, 1370
BstNI CCWGG 4 cut(s) 53, 149, 250, 710
BstNSI RCATGY 1 cut(s) 581
BstSCI CCNGG 4 cut(s) 51, 147, 248, 708
BstSLI GKGCMC 1 cut(s) 320
BstUI CGCG 1 cut(s) 840
BstV1I GCAGC 3 cut(s) 880, 1223, 1252
BstV2I GAAGAC 1 cut(s) 1111
BstX2I RGATCY 2 cut(s) 1129, 1417
BstYI RGATCY 2 cut(s) 1129, 1417
BstZ17I GTATAC 1 cut(s) 570
BsuRI GGCC 4 cut(s) 44, 422, 713, 1229
BtsCI GGATG 5 cut(s) 48, 526, 1021, 1317, 1426
BtsI GCAGTG 1 cut(s) 936
BtsIMutI CAGTG 6 cut(s) 285, 320, 501, 608, 936, 1239
BveI ACCTGC 1 cut(s) 286
Cac8I GCNNGC 4 cut(s) 414, 838, 927, 1413
Cfr13I GGNCC 3 cut(s) 110, 284, 712
CseI GACGC 1 cut(s) 1034
Csp6I GTAC 3 cut(s) 1063, 1205, 1285
CviAII CATG 5 cut(s) 186, 578, 692, 742, 913
CviQI GTAC 3 cut(s) 1063, 1205, 1285
DdeI CTNAG 8 cut(s) 63, 227, 312, 504, 753, 968, 1110, 1231
DpnI GATC 7 cut(s) 124, 363, 600, 618, 1131, 1277, 1419
DpnII GATC 7 cut(s) 122, 361, 598, 616, 1129, 1275, 1417
Eam1104I CTCTTC 1 cut(s) 1255
EarI CTCTTC 1 cut(s) 1255
Eco147I AGGCCT 1 cut(s) 1229
Eco31I GGTCTC 1 cut(s) 1040
Eco32I GATATC 1 cut(s) 805
Eco47I GGWCC 2 cut(s) 110, 284
Eco57I CTGAAG 2 cut(s) 717, 1005
Eco88I CYCGRG 2 cut(s) 939, 1323
EcoRII CCWGG 4 cut(s) 51, 147, 248, 708
EcoRV GATATC 1 cut(s) 805
FaeI CATG 5 cut(s) 189, 581, 695, 745, 916
FalI AAGNNNNNCTT 3 cut(s) 863, 895, 1442
FaqI GGGAC 1 cut(s) 752
FatI CATG 5 cut(s) 185, 577, 691, 741, 912
FauI CCCGC 1 cut(s) 1047
FbaI TGATCA 2 cut(s) 361, 598
FblI GTMKAC 2 cut(s) 569, 948
Fnu4HI GCNGC 3 cut(s) 894, 1212, 1266
FokI GGATG 5 cut(s) 35, 533, 1028, 1304, 1413
Fsp4HI GCNGC 3 cut(s) 894, 1212, 1266
FspBI CTAG 3 cut(s) 272, 620, 1037
GluI GCNGC 3 cut(s) 894, 1212, 1266
GsuI CTGGAG 3 cut(s) 74, 170, 515
HaeIII GGCC 4 cut(s) 44, 422, 713, 1229
HapII CCGG 1 cut(s) 866
HgaI GACGC 1 cut(s) 1034
Hin1II CATG 5 cut(s) 189, 581, 695, 745, 916
HinfI GANTC 3 cut(s) 10, 937, 1184
HpaII CCGG 1 cut(s) 866
HphI GGTGA 6 cut(s) 197, 446, 520, 527, 946, 1234
Hpy166II GTNNAC 3 cut(s) 570, 901, 949
Hpy188I TCNGA 7 cut(s) 9, 38, 142, 228, 756, 1346, 1394
Hpy188III TCNNGA 7 cut(s) 120, 241, 287, 329, 365, 620, 1257
Hpy8I GTNNAC 3 cut(s) 570, 901, 949
HpyAV CCTTC 3 cut(s) 69, 865, 1219
HpyCH4III ACNGT 3 cut(s) 174, 280, 953
HpyCH4IV ACGT 3 cut(s) 342, 641, 1207
HpyF10VI GCNNNNNNNGC 5 cut(s) 64, 554, 1199, 1208, 1370
HpyF3I CTNAG 8 cut(s) 63, 227, 312, 504, 753, 968, 1110, 1231
HpySE526I ACGT 3 cut(s) 342, 641, 1207
Hsp92II CATG 5 cut(s) 189, 581, 695, 745, 916
Ksp22I TGATCA 2 cut(s) 361, 598
Kzo9I GATC 7 cut(s) 122, 361, 598, 616, 1129, 1275, 1417
LguI GCTCTTC 1 cut(s) 1255
LmnI GCTCC 3 cut(s) 24, 55, 1347
Lsp1109I GCAGC 3 cut(s) 880, 1223, 1252
LweI GCATC 1 cut(s) 364
MaeI CTAG 3 cut(s) 272, 620, 1037
MaeII ACGT 3 cut(s) 342, 641, 1207
MaeIII GTNAC 5 cut(s) 434, 499, 653, 934, 1022
MalI GATC 7 cut(s) 124, 363, 600, 618, 1131, 1277, 1419
MboI GATC 7 cut(s) 122, 361, 598, 616, 1129, 1275, 1417
MboII GAAGA 4 cut(s) 710, 1025, 1111, 1272
MflI RGATCY 2 cut(s) 1129, 1417
MhlI GDGCHC 1 cut(s) 320
MluCI AATT 9 cut(s) 115, 400, 588, 719, 768, 793, 825, 844, 1029
MlyI GAGTC 1 cut(s) 931
MmeI TCCRAC 2 cut(s) 79, 1069
MroXI GAANNNNTTC 3 cut(s) 702, 875, 1118
MseI TTAA 5 cut(s) 788, 1140, 1218, 1329, 1449
MslI CAYNNNNRTG 2 cut(s) 506, 1220
MspI CCGG 1 cut(s) 866
MspR9I CCNGG 4 cut(s) 53, 149, 250, 710
MvaI CCWGG 4 cut(s) 53, 149, 250, 710
MvnI CGCG 1 cut(s) 840
MwoI GCNNNNNNNGC 5 cut(s) 64, 554, 1199, 1208, 1370
NdeII GATC 7 cut(s) 122, 361, 598, 616, 1129, 1275, 1417
NlaIII CATG 5 cut(s) 189, 581, 695, 745, 916
NlaIV GGNNCC 2 cut(s) 57, 285
NmeAIII GCCGAG 1 cut(s) 1129
NmuCI GTSAC 4 cut(s) 434, 499, 934, 1022
NspI RCATGY 1 cut(s) 581
NspV TTCGAA 1 cut(s) 728
OliI CACNNNNGTG 1 cut(s) 506
PaeR7I CTCGAG 1 cut(s) 939
PceI AGGCCT 1 cut(s) 1229
PciSI GCTCTTC 1 cut(s) 1255
PcsI WCGNNNNNNNCGW 1 cut(s) 712
PdmI GAANNNNTTC 3 cut(s) 702, 875, 1118
PfeI GAWTC 2 cut(s) 10, 1184
PfoI TCCNGGA 1 cut(s) 51
PkrI GCNGC 3 cut(s) 895, 1213, 1267
PleI GAGTC 1 cut(s) 931
PpsI GAGTC 1 cut(s) 931
Ppu21I YACGTR 1 cut(s) 1208
Psp6I CCWGG 4 cut(s) 51, 147, 248, 708
PspGI CCWGG 4 cut(s) 51, 147, 248, 708
PspN4I GGNNCC 2 cut(s) 57, 285
PspPI GGNCC 3 cut(s) 110, 284, 712
PspXI VCTCGAGB 1 cut(s) 939
PsuI RGATCY 2 cut(s) 1129, 1417
RsaI GTAC 3 cut(s) 1064, 1206, 1286
RsaNI GTAC 3 cut(s) 1063, 1205, 1285
RseI CAYNNNNRTG 2 cut(s) 506, 1220
SapI GCTCTTC 1 cut(s) 1255
SaqAI TTAA 5 cut(s) 788, 1140, 1218, 1329, 1449
SatI GCNGC 3 cut(s) 894, 1212, 1266
Sau3AI GATC 7 cut(s) 122, 361, 598, 616, 1129, 1275, 1417
Sau96I GGNCC 3 cut(s) 110, 284, 712
SchI GAGTC 1 cut(s) 931
ScrFI CCNGG 4 cut(s) 53, 149, 250, 710
SduI GDGCHC 1 cut(s) 320
SfaNI GCATC 1 cut(s) 364
Sfr274I CTCGAG 1 cut(s) 939
SfuI TTCGAA 1 cut(s) 728
SinI GGWCC 2 cut(s) 110, 284
SlaI CTCGAG 1 cut(s) 939
SmiMI CAYNNNNRTG 2 cut(s) 506, 1220
SmlI CTYRAG 2 cut(s) 329, 939
SmoI CTYRAG 2 cut(s) 329, 939
Sse9I AATT 9 cut(s) 115, 400, 588, 719, 768, 793, 825, 844, 1029
SseBI AGGCCT 1 cut(s) 1229
SsiI CCGC 3 cut(s) 840, 1054, 1202
SspI AATATT 1 cut(s) 661
SspMI CTAG 3 cut(s) 272, 620, 1037
StuI AGGCCT 1 cut(s) 1229
StyD4I CCNGG 4 cut(s) 51, 147, 248, 708
TaaI ACNGT 3 cut(s) 174, 280, 953
TaiI ACGT 3 cut(s) 345, 644, 1210
TaqI TCGA 5 cut(s) 563, 728, 940, 1071, 1423
TaqII GACCGA 1 cut(s) 629
TasI AATT 9 cut(s) 115, 400, 588, 719, 768, 793, 825, 844, 1029
TatI WGTACW 1 cut(s) 1284
TfiI GAWTC 2 cut(s) 10, 1184
Tru1I TTAA 5 cut(s) 788, 1140, 1218, 1329, 1449
Tru9I TTAA 5 cut(s) 788, 1140, 1218, 1329, 1449
TscAI CASTG 6 cut(s) 285, 320, 508, 615, 936, 1239
TseFI GTSAC 4 cut(s) 434, 499, 934, 1022
TseI GCWGC 3 cut(s) 893, 1211, 1265
Tsp45I GTSAC 4 cut(s) 434, 499, 934, 1022
TspDTI ATGAA 2 cut(s) 758, 1242
TspGWI ACGGA 1 cut(s) 115
TspRI CASTG 6 cut(s) 285, 320, 508, 615, 936, 1239
VpaK11BI GGWCC 2 cut(s) 110, 284
XapI RAATTY 6 cut(s) 115, 400, 588, 719, 793, 844
XbaI TCTAGA 1 cut(s) 619
XceI RCATGY 1 cut(s) 581
XcmI CCANNNNNNNNNTGG 1 cut(s) 1009
XhoI CTCGAG 1 cut(s) 939
XmiI GTMKAC 2 cut(s) 569, 948
XmnI GAANNNNTTC 3 cut(s) 702, 875, 1118
XspI CTAG 3 cut(s) 272, 620, 1037
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.