Pyruvate kinase
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G36580 AT3G52990 AT3G52990 |
| fragaria_vesca | FvH4_6g17480 FvH4_6g17480 FvH4_6g17480 FvH4_6g17480 FvH4_7g06490 FvH4_7g06490 FvH4_7g06490 FvH4_7g06490 FvH4_7g06490 |
| malus_domestica | MD02G1244000.v1.1 MD07G1072900.v1.1 MD07G1073000.v1.1 MD12G1096900.v1.1 MD14G1094200.v1.1 |
| prunus_persica | Prupe.2G091200_v2.0.a1 Prupe.2G091200_v2.0.a1 Prupe.2G091200_v2.0.a1 Prupe.7G120700_v2.0.a1 Prupe.7G120700_v2.0.a1 |
| pyrus_communis | pycom07g05600 pycom07g05630 pycom12g09800 pycom14g09200 |
| rosa_chinensis | RchiOBHm_Chr1g0334861 RchiOBHm_Chr3g0471721 |
| rosa_laevigata | RLG00000024139 RLG00000029414 |
| rosa_multiflora | Rmu_sc0000574.1_g000046 Rmu_sc0005631.1_g000026 Rmu_sc0026537.1_g000003 |
| rosa_roxburghii | Rroxscaffold_4G00316390 Rroxscaffold_6G00409610 |
| rosa_rugosa | Rorug01G0117400 Rorug03G0119000 Rorug03G0119100 Rorug03G0119200 |
| rosa_samantha | Rh1CG133000 Rh3AG170600 Rh3BG196300 Rh3DG178700 |
| rosa_wichuraiana | Rw0G009040 Rw1G011670 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 286 |
| AccI | GTMKAC | 2 cut(s) | 68, 569 |
| AccII | CGCG | 1 cut(s) | 717 |
| AciI | CCGC | 2 cut(s) | 715, 1277 |
| AclWI | GGATC | 1 cut(s) | 1487 |
| AcsI | RAATTY | 7 cut(s) | 115, 400, 541, 719, 756, 844, 1427 |
| AcuI | CTGAAG | 4 cut(s) | 248, 314, 717, 1005 |
| AfaI | GTAC | 5 cut(s) | 247, 1127, 1211, 1281, 1361 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 558, 1100 |
| AgsI | TTSAA | 9 cut(s) | 151, 384, 729, 773, 887, 1046, 1198, 1543, 1652 |
| AjnI | CCWGG | 1 cut(s) | 342 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1535, 1567 |
| AleI | CACNNNNGTG | 1 cut(s) | 506 |
| AluBI | AGCT | 5 cut(s) | 818, 1184, 1340, 1508, 1648 |
| AluI | AGCT | 5 cut(s) | 818, 1184, 1340, 1508, 1648 |
| Alw26I | GTCTC | 5 cut(s) | 125, 332, 536, 586, 1174 |
| AlwI | GGATC | 1 cut(s) | 1487 |
| Ama87I | CYCGRG | 3 cut(s) | 53, 939, 1398 |
| AoxI | GGCC | 5 cut(s) | 42, 375, 560, 1302, 1471 |
| ApeKI | GCWGC | 3 cut(s) | 893, 1286, 1340 |
| ApoI | RAATTY | 7 cut(s) | 115, 400, 541, 719, 756, 844, 1427 |
| AseI | ATTAAT | 1 cut(s) | 1106 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 702, 1193 |
| AspLEI | GCGC | 1 cut(s) | 318 |
| AspS9I | GGNCC | 2 cut(s) | 284, 560 |
| AsuHPI | GGTGA | 7 cut(s) | 493, 520, 527, 749, 946, 1309, 1645 |
| AsuII | TTCGAA | 1 cut(s) | 8 |
| AsuNHI | GCTAGC | 1 cut(s) | 1486 |
| AvaI | CYCGRG | 3 cut(s) | 53, 939, 1398 |
| AvaII | GGWCC | 1 cut(s) | 284 |
| BanII | GRGCYC | 1 cut(s) | 414 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 463, 495 |
| BauI | CACGAG | 2 cut(s) | 837, 978 |
| BbsI | GAAGAC | 1 cut(s) | 51 |
| BbvI | GCAGC | 3 cut(s) | 880, 1298, 1327 |
| BccI | CCATC | 4 cut(s) | 815, 1084, 1298, 1416 |
| BcgI | CGANNNNNNTGC | 1 cut(s) | 32 |
| BciT130I | CCWGG | 1 cut(s) | 344 |
| BclI | TGATCA | 1 cut(s) | 361 |
| BcoDI | GTCTC | 5 cut(s) | 125, 332, 536, 586, 1174 |
| BfaI | CTAG | 2 cut(s) | 272, 1487 |
| BfoI | RGCGCY | 1 cut(s) | 319 |
| BfuAI | ACCTGC | 1 cut(s) | 286 |
| BglII | AGATCT | 2 cut(s) | 856, 1204 |
| BisI | GCNGC | 3 cut(s) | 894, 1287, 1341 |
| BlsI | GCNGC | 3 cut(s) | 895, 1288, 1342 |
| Bme1390I | CCNGG | 1 cut(s) | 344 |
| Bme18I | GGWCC | 1 cut(s) | 284 |
| BmeT110I | CYCGRG | 3 cut(s) | 53, 939, 1398 |
| BmgT120I | GGNCC | 2 cut(s) | 284, 560 |
| BmiI | GGNNCC | 1 cut(s) | 30 |
| BmrFI | CCNGG | 1 cut(s) | 344 |
| BmsI | GCATC | 2 cut(s) | 184, 1612 |
| BmtI | GCTAGC | 1 cut(s) | 1490 |
| BpiI | GAAGAC | 1 cut(s) | 51 |
| BpmI | CTGGAG | 2 cut(s) | 44, 515 |
| Bpu14I | TTCGAA | 1 cut(s) | 8 |
| BsaBI | GATNNNNATC | 1 cut(s) | 236 |
| BsaI | GGTCTC | 1 cut(s) | 332 |
| BsaJI | CCNNGG | 3 cut(s) | 342, 504, 1397 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 558, 1100 |
| Bse1I | ACTGG | 2 cut(s) | 1017, 1522 |
| Bse3DI | GCAATG | 2 cut(s) | 90, 1263 |
| Bse8I | GATNNNNATC | 1 cut(s) | 236 |
| BseBI | CCWGG | 1 cut(s) | 344 |
| BseDI | CCNNGG | 3 cut(s) | 342, 504, 1397 |
| BseGI | GGATG | 3 cut(s) | 1021, 1076, 1501 |
| BseJI | GATNNNNATC | 1 cut(s) | 236 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 558, 1100 |
| BseMI | GCAATG | 2 cut(s) | 90, 1263 |
| BseMII | CTCAG | 5 cut(s) | 189, 279, 303, 599, 1176 |
| BseNI | ACTGG | 2 cut(s) | 1017, 1522 |
| BseRI | GAGGAG | 2 cut(s) | 41, 1162 |
| BseXI | GCAGC | 3 cut(s) | 880, 1298, 1327 |
| BsgI | GTGCAG | 1 cut(s) | 282 |
| Bsh1236I | CGCG | 1 cut(s) | 717 |
| BshFI | GGCC | 5 cut(s) | 44, 377, 562, 1304, 1473 |
| BsiHKCI | CYCGRG | 3 cut(s) | 53, 939, 1398 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 558, 1100 |
| BsmAI | GTCTC | 5 cut(s) | 125, 332, 536, 586, 1174 |
| BsmI | GAATGC | 2 cut(s) | 4, 648 |
| BsnI | GGCC | 5 cut(s) | 44, 377, 562, 1304, 1473 |
| Bso31I | GGTCTC | 1 cut(s) | 332 |
| BsoBI | CYCGRG | 3 cut(s) | 53, 939, 1398 |
| Bsp119I | TTCGAA | 1 cut(s) | 8 |
| Bsp1286I | GDGCHC | 1 cut(s) | 414 |
| Bsp1407I | TGTACA | 1 cut(s) | 1125 |
| Bsp143I | GATC | 8 cut(s) | 231, 361, 598, 856, 1204, 1350, 1492, 1638 |
| BspACI | CCGC | 2 cut(s) | 715, 1277 |
| BspANI | GGCC | 5 cut(s) | 44, 377, 562, 1304, 1473 |
| BspCNI | CTCAG | 5 cut(s) | 190, 280, 304, 598, 1177 |
| BspFNI | CGCG | 1 cut(s) | 717 |
| BspLI | GGNNCC | 1 cut(s) | 30 |
| BspMI | ACCTGC | 1 cut(s) | 286 |
| BspOI | GCTAGC | 1 cut(s) | 1490 |
| BspPI | GGATC | 1 cut(s) | 1487 |
| BspT104I | TTCGAA | 1 cut(s) | 8 |
| BspTNI | GGTCTC | 1 cut(s) | 332 |
| BsrDI | GCAATG | 2 cut(s) | 90, 1263 |
| BsrGI | TGTACA | 1 cut(s) | 1125 |
| BsrI | ACTGG | 2 cut(s) | 1017, 1522 |
| BssECI | CCNNGG | 3 cut(s) | 342, 504, 1397 |
| BssMI | GATC | 8 cut(s) | 231, 361, 598, 856, 1204, 1350, 1492, 1638 |
| BssNAI | GTATAC | 1 cut(s) | 570 |
| BssSI | CACGAG | 2 cut(s) | 837, 978 |
| Bst1107I | GTATAC | 1 cut(s) | 570 |
| Bst2BI | CACGAG | 2 cut(s) | 837, 978 |
| Bst2UI | CCWGG | 1 cut(s) | 344 |
| Bst4CI | ACNGT | 4 cut(s) | 280, 1055, 1100, 1595 |
| Bst6I | CTCTTC | 3 cut(s) | 330, 333, 513 |
| BstAUI | TGTACA | 1 cut(s) | 1125 |
| BstBI | TTCGAA | 1 cut(s) | 8 |
| BstC8I | GCNNGC | 4 cut(s) | 145, 715, 927, 1488 |
| BstDEI | CTNAG | 7 cut(s) | 63, 198, 288, 312, 585, 968, 1185 |
| BstEII | GGTNACC | 2 cut(s) | 499, 737 |
| BstF5I | GGATG | 3 cut(s) | 1021, 1076, 1501 |
| BstFNI | CGCG | 1 cut(s) | 717 |
| BstH2I | RGCGCY | 1 cut(s) | 319 |
| BstHHI | GCGC | 1 cut(s) | 318 |
| BstKTI | GATC | 8 cut(s) | 234, 364, 601, 859, 1207, 1353, 1495, 1641 |
| BstMAI | GTCTC | 5 cut(s) | 125, 332, 536, 586, 1174 |
| BstMBI | GATC | 8 cut(s) | 231, 361, 598, 856, 1204, 1350, 1492, 1638 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 645, 714, 1274, 1283, 1445 |
| BstNI | CCWGG | 1 cut(s) | 344 |
| BstNSI | RCATGY | 2 cut(s) | 581, 1039 |
| BstPI | GGTNACC | 2 cut(s) | 499, 737 |
| BstSCI | CCNGG | 1 cut(s) | 342 |
| BstUI | CGCG | 1 cut(s) | 717 |
| BstV1I | GCAGC | 3 cut(s) | 880, 1298, 1327 |
| BstV2I | GAAGAC | 1 cut(s) | 51 |
| BstX2I | RGATCY | 3 cut(s) | 856, 1204, 1492 |
| BstYI | RGATCY | 3 cut(s) | 856, 1204, 1492 |
| BstZ17I | GTATAC | 1 cut(s) | 570 |
| BsuRI | GGCC | 5 cut(s) | 44, 377, 562, 1304, 1473 |
| BtgZI | GCGATG | 1 cut(s) | 1635 |
| BtsCI | GGATG | 3 cut(s) | 1021, 1076, 1501 |
| BtsI | GCAGTG | 1 cut(s) | 936 |
| BtsIMutI | CAGTG | 2 cut(s) | 936, 1096 |
| BveI | ACCTGC | 1 cut(s) | 286 |
| Cac8I | GCNNGC | 4 cut(s) | 145, 715, 927, 1488 |
| CfoI | GCGC | 1 cut(s) | 318 |
| Cfr13I | GGNCC | 2 cut(s) | 284, 560 |
| Csp6I | GTAC | 5 cut(s) | 246, 1126, 1210, 1280, 1360 |
| CviAII | CATG | 8 cut(s) | 186, 578, 692, 1036, 1066, 1115, 1483, 1589 |
| CviQI | GTAC | 5 cut(s) | 246, 1126, 1210, 1280, 1360 |
| DdeI | CTNAG | 7 cut(s) | 63, 198, 288, 312, 585, 968, 1185 |
| DpnI | GATC | 8 cut(s) | 233, 363, 600, 858, 1206, 1352, 1494, 1640 |
| DpnII | GATC | 8 cut(s) | 231, 361, 598, 856, 1204, 1350, 1492, 1638 |
| DraI | TTTAAA | 1 cut(s) | 1156 |
| Eam1104I | CTCTTC | 3 cut(s) | 330, 333, 513 |
| EarI | CTCTTC | 3 cut(s) | 330, 333, 513 |
| Eco147I | AGGCCT | 2 cut(s) | 1304, 1473 |
| Eco24I | GRGCYC | 1 cut(s) | 414 |
| Eco31I | GGTCTC | 1 cut(s) | 332 |
| Eco47I | GGWCC | 1 cut(s) | 284 |
| Eco57I | CTGAAG | 4 cut(s) | 248, 314, 717, 1005 |
| Eco88I | CYCGRG | 3 cut(s) | 53, 939, 1398 |
| Eco91I | GGTNACC | 2 cut(s) | 499, 737 |
| EcoO65I | GGTNACC | 2 cut(s) | 499, 737 |
| EcoRI | GAATTC | 1 cut(s) | 541 |
| EcoRII | CCWGG | 1 cut(s) | 342 |
| EcoT22I | ATGCAT | 1 cut(s) | 6 |
| EcoT38I | GRGCYC | 1 cut(s) | 414 |
| FaeI | CATG | 8 cut(s) | 189, 581, 695, 1039, 1069, 1118, 1486, 1592 |
| FatI | CATG | 8 cut(s) | 185, 577, 691, 1035, 1065, 1114, 1482, 1588 |
| FauI | CCCGC | 1 cut(s) | 722 |
| FbaI | TGATCA | 1 cut(s) | 361 |
| FblI | GTMKAC | 2 cut(s) | 68, 569 |
| Fnu4HI | GCNGC | 3 cut(s) | 894, 1287, 1341 |
| FokI | GGATG | 3 cut(s) | 1028, 1063, 1488 |
| FriOI | GRGCYC | 1 cut(s) | 414 |
| Fsp4HI | GCNGC | 3 cut(s) | 894, 1287, 1341 |
| FspBI | CTAG | 2 cut(s) | 272, 1487 |
| GlaI | GCGC | 1 cut(s) | 317 |
| GluI | GCNGC | 3 cut(s) | 894, 1287, 1341 |
| GsuI | CTGGAG | 2 cut(s) | 44, 515 |
| HaeII | RGCGCY | 1 cut(s) | 319 |
| HaeIII | GGCC | 5 cut(s) | 44, 377, 562, 1304, 1473 |
| HhaI | GCGC | 1 cut(s) | 318 |
| Hin1II | CATG | 8 cut(s) | 189, 581, 695, 1039, 1069, 1118, 1486, 1592 |
| Hin6I | GCGC | 1 cut(s) | 316 |
| HinP1I | GCGC | 1 cut(s) | 316 |
| HinfI | GANTC | 8 cut(s) | 10, 56, 589, 745, 937, 1259, 1511, 1532 |
| HphI | GGTGA | 7 cut(s) | 493, 520, 527, 749, 946, 1309, 1645 |
| Hpy166II | GTNNAC | 4 cut(s) | 69, 570, 901, 1128 |
| Hpy188I | TCNGA | 5 cut(s) | 38, 228, 313, 588, 1421 |
| Hpy188III | TCNNGA | 9 cut(s) | 23, 53, 241, 287, 332, 365, 1202, 1332, 1405 |
| Hpy8I | GTNNAC | 4 cut(s) | 69, 570, 901, 1128 |
| HpyAV | CCTTC | 5 cut(s) | 145, 424, 865, 1294, 1537 |
| HpyCH4III | ACNGT | 4 cut(s) | 280, 1055, 1100, 1595 |
| HpyCH4IV | ACGT | 1 cut(s) | 215 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 645, 714, 1274, 1283, 1445 |
| HpyF3I | CTNAG | 7 cut(s) | 63, 198, 288, 312, 585, 968, 1185 |
| HpySE526I | ACGT | 1 cut(s) | 215 |
| Hsp92II | CATG | 8 cut(s) | 189, 581, 695, 1039, 1069, 1118, 1486, 1592 |
| HspAI | GCGC | 1 cut(s) | 316 |
| Ksp22I | TGATCA | 1 cut(s) | 361 |
| Kzo9I | GATC | 8 cut(s) | 231, 361, 598, 856, 1204, 1350, 1492, 1638 |
| LmnI | GCTCC | 1 cut(s) | 28 |
| Lsp1109I | GCAGC | 3 cut(s) | 880, 1298, 1327 |
| LweI | GCATC | 2 cut(s) | 184, 1612 |
| MaeI | CTAG | 2 cut(s) | 272, 1487 |
| MaeII | ACGT | 1 cut(s) | 215 |
| MaeIII | GTNAC | 5 cut(s) | 499, 653, 737, 934, 1584 |
| MalI | GATC | 8 cut(s) | 233, 363, 600, 858, 1206, 1352, 1494, 1640 |
| MboI | GATC | 8 cut(s) | 231, 361, 598, 856, 1204, 1350, 1492, 1638 |
| MboII | GAAGA | 8 cut(s) | 51, 241, 320, 347, 439, 530, 710, 1648 |
| MflI | RGATCY | 3 cut(s) | 856, 1204, 1492 |
| MhlI | GDGCHC | 1 cut(s) | 414 |
| MlyI | GAGTC | 2 cut(s) | 65, 931 |
| MmeI | TCCRAC | 4 cut(s) | 79, 198, 1037, 1216 |
| Mph1103I | ATGCAT | 1 cut(s) | 6 |
| MroXI | GAANNNNTTC | 2 cut(s) | 702, 1193 |
| MseI | TTAA | 4 cut(s) | 788, 1106, 1155, 1215 |
| MslI | CAYNNNNRTG | 3 cut(s) | 506, 798, 1295 |
| MspA1I | CMGCKG | 2 cut(s) | 1184, 1508 |
| MspR9I | CCNGG | 1 cut(s) | 344 |
| Mva1269I | GAATGC | 2 cut(s) | 4, 648 |
| MvaI | CCWGG | 1 cut(s) | 344 |
| MvnI | CGCG | 1 cut(s) | 717 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 645, 714, 1274, 1283, 1445 |
| NdeII | GATC | 8 cut(s) | 231, 361, 598, 856, 1204, 1350, 1492, 1638 |
| NheI | GCTAGC | 1 cut(s) | 1486 |
| NlaIII | CATG | 8 cut(s) | 189, 581, 695, 1039, 1069, 1118, 1486, 1592 |
| NlaIV | GGNNCC | 1 cut(s) | 30 |
| NmuCI | GTSAC | 4 cut(s) | 499, 737, 934, 1584 |
| NsiI | ATGCAT | 1 cut(s) | 6 |
| NspI | RCATGY | 2 cut(s) | 581, 1039 |
| NspV | TTCGAA | 1 cut(s) | 8 |
| OliI | CACNNNNGTG | 1 cut(s) | 506 |
| PaeR7I | CTCGAG | 1 cut(s) | 53 |
| PceI | AGGCCT | 2 cut(s) | 1304, 1473 |
| PctI | GAATGC | 2 cut(s) | 4, 648 |
| PdmI | GAANNNNTTC | 2 cut(s) | 702, 1193 |
| PfeI | GAWTC | 6 cut(s) | 10, 589, 745, 1259, 1511, 1532 |
| PkrI | GCNGC | 3 cut(s) | 895, 1288, 1342 |
| PleI | GAGTC | 2 cut(s) | 64, 931 |
| PpsI | GAGTC | 2 cut(s) | 64, 931 |
| PshBI | ATTAAT | 1 cut(s) | 1106 |
| Psp6I | CCWGG | 1 cut(s) | 342 |
| PspEI | GGTNACC | 2 cut(s) | 499, 737 |
| PspGI | CCWGG | 1 cut(s) | 342 |
| PspN4I | GGNNCC | 1 cut(s) | 30 |
| PspPI | GGNCC | 2 cut(s) | 284, 560 |
| PsuI | RGATCY | 3 cut(s) | 856, 1204, 1492 |
| PvuII | CAGCTG | 2 cut(s) | 1184, 1508 |
| RsaI | GTAC | 5 cut(s) | 247, 1127, 1211, 1281, 1361 |
| RsaNI | GTAC | 5 cut(s) | 246, 1126, 1210, 1280, 1360 |
| RseI | CAYNNNNRTG | 3 cut(s) | 506, 798, 1295 |
| SaqAI | TTAA | 4 cut(s) | 788, 1106, 1155, 1215 |
| SatI | GCNGC | 3 cut(s) | 894, 1287, 1341 |
| Sau3AI | GATC | 8 cut(s) | 231, 361, 598, 856, 1204, 1350, 1492, 1638 |
| Sau96I | GGNCC | 2 cut(s) | 284, 560 |
| SchI | GAGTC | 2 cut(s) | 65, 931 |
| ScrFI | CCNGG | 1 cut(s) | 344 |
| SduI | GDGCHC | 1 cut(s) | 414 |
| SfaNI | GCATC | 2 cut(s) | 184, 1612 |
| Sfr274I | CTCGAG | 1 cut(s) | 53 |
| SfuI | TTCGAA | 1 cut(s) | 8 |
| SinI | GGWCC | 1 cut(s) | 284 |
| SlaI | CTCGAG | 1 cut(s) | 53 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 506, 798, 1295 |
| SmlI | CTYRAG | 1 cut(s) | 53 |
| SmoI | CTYRAG | 1 cut(s) | 53 |
| SseBI | AGGCCT | 2 cut(s) | 1304, 1473 |
| SsiI | CCGC | 2 cut(s) | 715, 1277 |
| SspMI | CTAG | 2 cut(s) | 272, 1487 |
| StuI | AGGCCT | 2 cut(s) | 1304, 1473 |
| StyD4I | CCNGG | 1 cut(s) | 342 |
| TaaI | ACNGT | 4 cut(s) | 280, 1055, 1100, 1595 |
| TaiI | ACGT | 1 cut(s) | 218 |
| TaqI | TCGA | 3 cut(s) | 8, 54, 1498 |
| TatI | WGTACW | 3 cut(s) | 1125, 1209, 1359 |
| TfiI | GAWTC | 6 cut(s) | 10, 589, 745, 1259, 1511, 1532 |
| Tru1I | TTAA | 4 cut(s) | 788, 1106, 1155, 1215 |
| Tru9I | TTAA | 4 cut(s) | 788, 1106, 1155, 1215 |
| TscAI | CASTG | 2 cut(s) | 936, 1103 |
| TseFI | GTSAC | 4 cut(s) | 499, 737, 934, 1584 |
| TseI | GCWGC | 3 cut(s) | 893, 1286, 1340 |
| Tsp45I | GTSAC | 4 cut(s) | 499, 737, 934, 1584 |
| TspDTI | ATGAA | 5 cut(s) | 174, 194, 816, 1317, 1545 |
| TspGWI | ACGGA | 2 cut(s) | 115, 475 |
| TspRI | CASTG | 2 cut(s) | 936, 1103 |
| VpaK11BI | GGWCC | 1 cut(s) | 284 |
| VspI | ATTAAT | 1 cut(s) | 1106 |
| XapI | RAATTY | 7 cut(s) | 115, 400, 541, 719, 756, 844, 1427 |
| XceI | RCATGY | 2 cut(s) | 581, 1039 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1009 |
| XhoI | CTCGAG | 1 cut(s) | 53 |
| XmiI | GTMKAC | 2 cut(s) | 68, 569 |
| XmnI | GAANNNNTTC | 2 cut(s) | 702, 1193 |
| XspI | CTAG | 2 cut(s) | 272, 1487 |
| Zsp2I | ATGCAT | 1 cut(s) | 6 |